View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15327_low_3 (Length: 301)
Name: NF15327_low_3
Description: NF15327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15327_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 3857270 - 3856986
Alignment:
| Q |
1 |
caaatactaaaaagaatatcagaaaaattgttagcatttcatttatttaactactgatcaaattaattttcttttatgtgaaaacagtgacatttttcac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
3857270 |
caaatactaaaaagaatatcagaaaaattgttagcatttcatttatttaactacttatcaaattaattttcttttatgtgaaaccagtgacatttttcac |
3857171 |
T |
|
| Q |
101 |
taataatatagaagtcctagcaaccgatcattgaaagtaataatagagaaaatggtgacaaaaagctacaaagtcacttcacggacaaatctttacatat |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3857170 |
taataatatagaagtcctagcaaccaatcattgaaagtaataatagagaaaatggtgacaaaaagctacaaagtcacttcacggacaaatctttacatat |
3857071 |
T |
|
| Q |
201 |
gattatatttgatcctatatcactattaatttatgcgacacttgcattataaatattcacaaatgtgagacgtttgtgttaatat |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3857070 |
gattatatttgatcctatatcactattaatttatgcgacacttgcattataaatattcacaaatgtgagacgtttgtgttaatat |
3856986 |
T |
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