View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15329_high_13 (Length: 205)
Name: NF15329_high_13
Description: NF15329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15329_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 54472285 - 54472088
Alignment:
| Q |
1 |
gtagggtagtaatgaatgtgaggaggttgtgatctcttcttccttcttgtacatataacgcagagtaggataatgacaaggaggattatacaagctgcac |
100 |
Q |
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| T |
54472285 |
gtagggtagtaatgaatgtgatgaggttgtgatctcttcttccttcttgtacatataacgcagagtaggataatgacaaggaggattatacaagctgcac |
54472186 |
T |
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| Q |
101 |
ctgcaactgctattataccacccacgctcaattgattcccattgttatcatttgtattgttgccgttgttcgagggtgatgatttatgatgatgatgt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54472185 |
ctgcaactgctattataccacccacgctcaattgattcccattgttatcatttgtattgttgccgttgttcgagggtgatgatttatgatgatgatgt |
54472088 |
T |
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