View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15329_high_5 (Length: 587)

Name: NF15329_high_5
Description: NF15329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15329_high_5
NF15329_high_5
[»] chr7 (13 HSPs)
chr7 (302-568)||(27289884-27290150)
chr7 (5-211)||(27289583-27289790)
chr7 (353-564)||(27276730-27276951)
chr7 (353-551)||(27268700-27268911)
chr7 (353-551)||(27261832-27262041)
chr7 (8-89)||(14143229-14143310)
chr7 (8-98)||(16111318-16111409)
chr7 (8-88)||(13663762-13663842)
chr7 (8-88)||(16312976-16313056)
chr7 (42-85)||(4415498-4415541)
chr7 (42-89)||(16549520-16549567)
chr7 (42-89)||(16616095-16616142)
chr7 (8-85)||(13876733-13876810)
[»] chr3 (10 HSPs)
chr3 (5-90)||(19638759-19638844)
chr3 (8-89)||(5209420-5209501)
chr3 (8-85)||(16027667-16027744)
chr3 (8-89)||(18125135-18125216)
chr3 (42-85)||(13146520-13146563)
chr3 (42-85)||(17014570-17014613)
chr3 (8-89)||(11187471-11187552)
chr3 (46-83)||(15840604-15840641)
chr3 (41-85)||(18004333-18004377)
chr3 (44-80)||(19929689-19929725)
[»] scaffold0035 (1 HSPs)
scaffold0035 (8-89)||(113056-113137)
[»] chr8 (7 HSPs)
chr8 (8-89)||(22670405-22670486)
chr8 (8-88)||(20261514-20261594)
chr8 (8-88)||(21048144-21048224)
chr8 (13-86)||(18162856-18162929)
chr8 (8-85)||(22464603-22464680)
chr8 (42-89)||(19938685-19938732)
chr8 (42-82)||(21295620-21295660)
[»] chr2 (4 HSPs)
chr2 (4-80)||(22674097-22674173)
chr2 (42-85)||(24805078-24805121)
chr2 (8-89)||(28704639-28704720)
chr2 (42-88)||(24839166-24839212)
[»] scaffold0758 (1 HSPs)
scaffold0758 (8-91)||(1779-1862)
[»] chr6 (6 HSPs)
chr6 (42-85)||(14056803-14056846)
chr6 (42-85)||(14062932-14062975)
chr6 (30-85)||(17611989-17612045)
chr6 (42-85)||(21126777-21126820)
chr6 (42-85)||(22383357-22383400)
chr6 (42-89)||(22812191-22812238)
[»] scaffold0193 (1 HSPs)
scaffold0193 (8-85)||(12171-12248)
[»] scaffold0056 (1 HSPs)
scaffold0056 (8-89)||(29056-29137)
[»] scaffold0015 (1 HSPs)
scaffold0015 (8-85)||(159582-159659)
[»] chr4 (3 HSPs)
chr4 (8-89)||(17244174-17244255)
chr4 (42-85)||(16851355-16851398)
chr4 (42-88)||(15874092-15874138)
[»] scaffold0389 (1 HSPs)
scaffold0389 (8-88)||(11418-11498)
[»] scaffold0382 (2 HSPs)
scaffold0382 (42-85)||(4734-4777)
scaffold0382 (42-85)||(13117-13160)
[»] scaffold0207 (1 HSPs)
scaffold0207 (42-85)||(27789-27832)
[»] scaffold0084 (1 HSPs)
scaffold0084 (42-85)||(45906-45949)
[»] chr1 (5 HSPs)
chr1 (42-85)||(19163131-19163174)
chr1 (8-89)||(21127770-21127851)
chr1 (42-85)||(17718468-17718511)
chr1 (42-85)||(22652036-22652079)
chr1 (44-85)||(21209220-21209261)
[»] scaffold0863 (1 HSPs)
scaffold0863 (42-88)||(911-957)
[»] scaffold0453 (1 HSPs)
scaffold0453 (8-85)||(5112-5189)
[»] scaffold0047 (1 HSPs)
scaffold0047 (8-89)||(5681-5762)
[»] chr5 (3 HSPs)
chr5 (8-89)||(26760163-26760244)
chr5 (42-85)||(23485470-23485513)
chr5 (41-85)||(19467502-19467546)
[»] scaffold0682 (1 HSPs)
scaffold0682 (42-85)||(5481-5524)
[»] scaffold0161 (2 HSPs)
scaffold0161 (42-85)||(13542-13585)
scaffold0161 (42-85)||(18215-18258)
[»] scaffold0017 (1 HSPs)
scaffold0017 (42-85)||(46592-46635)
[»] scaffold0012 (1 HSPs)
scaffold0012 (42-85)||(135090-135133)
[»] scaffold0080 (1 HSPs)
scaffold0080 (42-87)||(43173-43218)


Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-129; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 302 - 568
Target Start/End: Original strand, 27289884 - 27290150
Alignment:
Q  302 gtaaatttccacaatcataataagttattccctttcagccgannnnnnnncttctatatacacaagagttagagatataatttccatttatttgttttta 401  Q
    ||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27289884 gtaaatttccacaatcataataagttattccctttcagccgattttttttcttctatatacacaagagttagagatataatttccatttatttgttttta 27289983  T
Q  402 tgaactatgggtatttgttgaagagtgttccaaatagaatattcttcatgaggtatttagatctatctcctttaattaagataacgcataaaaatagaga 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  27289984 tgaactatgggtatttgttgaagagtgttccaaatagaatattcttcatgaggtatttagatctatcttctttaattaagataacccataaaaatagaga 27290083  T
Q  502 aaagaataccaaaatatgtatcttataggttcttgaagtgagtaagtgttacgagagaatgctattc 568  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27290084 aaagaataccaaaatatgtatcttataggttcttgaagtgagtaagtgttacgagagaatgctattc 27290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 27289583 - 27289790
Alignment:
Q  5 gagtgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggttgaggcttacacatat 104  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27289583 gagtgataagaaatggttgtgggac-aaaagtttgaacatgctaactggagattaatctttaagcttagcaagttacaactggttgaggcttacacatat 27289681  T
Q  105 attacctttgtnnnnnnnngtactttcccttattgtattggaataattattattaattaaatgctagttataagcacttttcctt--aaaaaaagttata 202  Q
    |||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||    
T  27289682 attacctttgtaaaaaaaagtactttcccttattgtattggaataattattattaatgaaatgctagctataagcacttttccttaaaaaaaaagttata 27289781  T
Q  203 tatatacct 211  Q
    |||||||||    
T  27289782 tatatacct 27289790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 353 - 564
Target Start/End: Original strand, 27276730 - 27276951
Alignment:
Q  353 ttctatatacacaagagttagagatataatttccatttatttgtttttatgaactatgggtatttg----------ttgaagagtgttccaaatagaata 442  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||          |||| || |||| |||| |||||     
T  27276730 ttctatatacacaagagttagagattgaatttccatttatttgtttgtatgaactatgggtatttgagtttctttgttgatgaatgtttcaaagagaatg 27276829  T
Q  443 ttcttcatgaggtatttagatctatctcctttaattaagataacgcataaaaatagagaaaagaataccaaaatatgtatcttataggttcttgaagtga 542  Q
    ||||||| ||| |||||||||||||||| ||| ||| ||  ||| ||||||||||||||||| |||||||||||||  |||||||||||||||| |||||    
T  27276830 ttcttcacgagatatttagatctatctcatttgattcagcgaacacataaaaatagagaaaataataccaaaatattcatcttataggttcttggagtga 27276929  T
Q  543 gtaagtgttacgagagaatgct 564  Q
    ||||| ||||||||||||||||    
T  27276930 gtaagcgttacgagagaatgct 27276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 353 - 551
Target Start/End: Original strand, 27268700 - 27268911
Alignment:
Q  353 ttctatatacacaagagttagagatataatttccatttatttgtttttatgaactatgggtatttg----------ttgaagagt---gttccaaataga 439  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||          |||||||||   |||||||| |||    
T  27268700 ttctatatacacaagagttagagattgaatttccatttatttgtttttatgaactatggatatttgagtttctttgttgaagagtactgttccaaaaaga 27268799  T
Q  440 atattcttcatgaggtatttagatctatctcctttaattaagataacgcataaaaatagagaaaagaataccaaaatatgtatcttataggttcttgaag 539  Q
    | | |||||||||||||||||||||||||||  |||||| || |||| ||||||||||| || ||||||| ||||||||| |||||||||||| ||| ||    
T  27268800 acactcttcatgaggtatttagatctatctcgcttaattcagctaacacataaaaatagtgagaagaataacaaaatatgcatcttataggtttttggag 27268899  T
Q  540 tgagtaagtgtt 551  Q
    |||  |||||||    
T  27268900 tgatgaagtgtt 27268911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 353 - 551
Target Start/End: Original strand, 27261832 - 27262041
Alignment:
Q  353 ttctatatacacaagagttagagatataatttccatttatttgtttttatgaactatgggta----------tttgttgaagag---tgttccaaataga 439  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||| ||          ||||||||||||   ||||||||| |||    
T  27261832 ttctatatacacaagagttagagattgaatttccatttatttatttttatgaactatggatatttgagtttctttgttgaagagtactgttccaaaaaga 27261931  T
Q  440 atattcttcatgaggtatttagatctatctcctttaattaagataacgcataaaaatagagaaaagaataccaaaatatgtatcttataggttcttgaag 539  Q
    | | |||||||||||||||||||||||||||  |||||| || |||  || |||||||  || ||||||| ||||||||| |||||||||||| ||| ||    
T  27261932 acactcttcatgaggtatttagatctatctcgcttaattcagctaa--cacaaaaataatgagaagaataacaaaatatgcatcttataggtttttggag 27262029  T
Q  540 tgagtaagtgtt 551  Q
    |||  |||||||    
T  27262030 tgatgaagtgtt 27262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 14143310 - 14143229
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||||||||||| |||||||||||||||||||||||||    
T  14143310 tgataagaaatggatgtggaacagaaggttgggacatgctaactggagattaatctctaagcttagcaagttacaactggtt 14143229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 16111318 - 16111409
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt-gaggcttac 98  Q
    ||||||||||||||||||  ||  || ||| || |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||    
T  16111318 tgataagaaatggttgtgacacagaatgttggaacatgctaactggagattaatctctaagcttagtaagttacaactagttagaggcttac 16111409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13663842 - 13663762
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||||||||||| ||||||||| ||||||||||||||    
T  13663842 tgataagaaatggatgtggcacagaaggttgggacatgctaactggagattaatctctaagcttagtaagttacaactggt 13663762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 16312976 - 16313056
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgag-catgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    ||||||||||||| ||||| || | ||| ||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  16312976 tgataagaaatggatgtggcac-agaaggttgagacatgctaactggaggttaatctctaagcttagtaagttacaactggt 16313056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 4415498 - 4415541
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||| | ||| |||||||||||||||||    
T  4415498 catgctaactggagattaatatctaaacttagcaagttacaact 4415541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 16549520 - 16549567
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    |||| ||||||||||||||||| ||||||||| |||||| ||||||||    
T  16549520 catgttaactggagattaatctctaagcttagtaagttagaactggtt 16549567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 16616142 - 16616095
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    |||| ||||||||||||||||| ||||||||| |||||| ||||||||    
T  16616142 catgttaactggagattaatctctaagcttagtaagttagaactggtt 16616095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 13876810 - 13876733
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| ||||| ||  || ||| |  |||| ||||||||||||||||| ||||||||| || ||||||||    
T  13876810 tgataagaaatggatgtggcacagaaggttgggacatgttaactggagattaatctctaagcttagtaaattacaact 13876733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 19638759 - 19638844
Alignment:
Q  5 gagtgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggttg 90  Q
    |||||||||||||||||||||| ||  || ||| |  |||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  19638759 gagtgataagaaatggttgtggcacagaaggttaggacatgctaactggagattaatctctaagcttactaagttacaactggttg 19638844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5209501 - 5209420
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgag-catgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| || | ||| ||||| ||||||||||||||  |||||| |||||||||||||||||||||||||    
T  5209501 tgataagaaatggatgtggcac-agaaggttgagacatgctaactggaggctaatctctaagcttagcaagttacaactggtt 5209420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 16027744 - 16027667
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||||||||||| ||||||||| |||||||||||    
T  16027744 tgataagaaatggatgtggcacagaaggttgggacatgctaactggagattaatctctaagcttagtaagttacaact 16027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 18125135 - 18125216
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| ||  |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  18125135 tgataagaaatggatgtggcacagaaggttggaaaatgctaactgaagattaatctctaagcttagtaagttacaactggtt 18125216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 13146563 - 13146520
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  13146563 catgctaactggagattaatctctaaacttagcaagttacaact 13146520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 17014613 - 17014570
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  17014613 catgctaactggagattaatctctaaacttagcaagttacaact 17014570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 11187552 - 11187471
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || | | | ||||||||||| ||||||||| | ||||||||| ||||||||| |||||    
T  11187552 tgataagaaatggatgtggcacagaagggtggggcatgctaactagagattaatttctaagcttagtaagttacaattggtt 11187471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 15840641 - 15840604
Alignment:
Q  46 ctaactggagattaatctttaagcttagcaagttacaa 83  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  15840641 ctaactggagattaatctctaagcttagaaagttacaa 15840604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 18004377 - 18004333
Alignment:
Q  41 gcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||| ||||||||||| | ||| |||||||||||||||||    
T  18004377 gcatgctaattggagattaatttctaaacttagcaagttacaact 18004333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 19929725 - 19929689
Alignment:
Q  44 tgctaactggagattaatctttaagcttagcaagtta 80  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  19929725 tgctaactagagattaatctataagcttagcaagtta 19929689  T

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Target: scaffold0035 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 113056 - 113137
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  113056 tgataagaaatggatgtggcacagaaggttgggacatgctaactggaggttaatctataagcttagcaagttacaactggtt 113137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 22670486 - 22670405
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  22670486 tgataagaaatggatgtggcacagaaggttgggacatgctaactggaggttaatctctaagcttagcaagttacaactggtt 22670405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 20261514 - 20261594
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    ||||||||||||| ||||| |   || ||| || ||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  20261514 tgataagaaatggatgtggcatagaaggttggaacatgctaactggagattgatctctaagcttagtaagttacaactggt 20261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 21048144 - 21048224
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    ||||||||||||| ||||| |   || ||| || ||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  21048144 tgataagaaatggatgtggcatagaaggttggaacatgctaactggagattgatctctaagcttagtaagttacaactggt 21048224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 18162929 - 18162856
Alignment:
Q  13 agaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactg 86  Q
    |||||||||||||| |   || |||||  |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  18162929 agaaatggttgtggcatagaaggtttggtcatgctaactggagataaatctctaagcttagtaagttacaactg 18162856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 22464603 - 22464680
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||| |||||| ||||| || ||| ||| |  |||||||||||||||||||||| |||| |||| |||||||||||    
T  22464603 tgataataaatgggtgtggcacaaaaggttgggacatgctaactggagattaatctctaagattagtaagttacaact 22464680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 19938732 - 19938685
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    |||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  19938732 catgctaattggaggttaatctctaagcttagtaagttacaactggtt 19938685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 21295660 - 21295620
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttaca 82  Q
    |||| ||||||||||||||||| ||||||||| ||||||||    
T  21295660 catgttaactggagattaatctctaagcttagtaagttaca 21295620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 22674173 - 22674097
Alignment:
Q  4 cgagtgataagaaatggttgtgggaccaaaagtttgag-catgctaactggagattaatctttaagcttagcaagtta 80  Q
    ||||||||||||||||||||||| || | ||| ||||| |||||||||||||||||||||| ||||||||| ||||||    
T  22674173 cgagtgataagaaatggttgtggcac-agaagattgagacatgctaactggagattaatctctaagcttagtaagtta 22674097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 24805078 - 24805121
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24805078 catgctaactggagattaatctttaaacttagcaagttacaact 24805121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 28704639 - 28704720
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||| || |||||||||| |||||||||||||||||||||||||    
T  28704639 tgataagaaatggatgtggcacagaaggttgggacatgctaattgcagattaatctctaagcttagcaagttacaactggtt 28704720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 24839212 - 24839166
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  24839212 catgttaactagagattaatctttaagcttagtaagttacaactggt 24839166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 1862 - 1779
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggttga 91  Q
    |||||||||||||  |||| ||  |||||| |  |||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  1862 tgataagaaatggccgtggcacataaagttgggacatgctaactggagattaatctctaagcttagtaagttacaactgattga 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 14056803 - 14056846
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  14056803 catgctaactggagattaatctctaagcttagcaagttacaact 14056846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 14062932 - 14062975
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  14062932 catgctaactggagattaatctctaagcttagcaagttacaact 14062975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 17611989 - 17612045
Alignment:
Q  30 caaaagtttgag-catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||    
T  17611989 caaaaggttgagacatgctaactggagattaatctctaaacttagcaagttacaact 17612045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 21126820 - 21126777
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  21126820 catgctaactggagattaatctctaaacttagcaagttacaact 21126777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 22383400 - 22383357
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  22383400 catgctaactggagattaatctctaaacttagcaagttacaact 22383357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 22812238 - 22812191
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  22812238 catgctaattggagattaatctctaagcttagtaagttacaactggtt 22812191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 12248 - 12171
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||||||||||| ||||||||| |||||||||||    
T  12248 tgataagaaatggatgtggcacagaaggttgggacatgctaactggagattaatctataagcttagtaagttacaact 12171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 29056 - 29137
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||| ||| ||||| ||  || ||| || |||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  29056 tgataagaagtggatgtggcacagaaggttggaacatgctaactggaggttaatctctaagcttagtaagttacaactggtt 29137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 159582 - 159659
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||| ||||||| |||||||||||||||||||||    
T  159582 tgataagaaatggatgtggcacagaaggttgggacatgctaactggaggttaatctctaagcttagcaagttacaact 159659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 17244255 - 17244174
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  17244255 tgataagaaatggatgtggcacagaaggttgggacatgctaattggagattaatctctaagcttagtaagttacaactggtt 17244174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 16851398 - 16851355
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||| ||||||| |||||||||||||||||||||    
T  16851398 catgctaactggaggttaatctctaagcttagcaagttacaact 16851355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 15874092 - 15874138
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||    
T  15874092 catgctaactggagattaatctctaagcttagtaagttagaactggt 15874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 11498 - 11418
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    ||||||||||||| ||||| || ||| ||| |  |||||||||||||||||||||| ||| ||||  ||||||||||||||    
T  11498 tgataagaaatggatgtggcacaaaaggttgggacatgctaactggagattaatctctaaacttaataagttacaactggt 11418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 4734 - 4777
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  4734 catgctaactggagattaatctctaagcttagtaagttacaact 4777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 13117 - 13160
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  13117 catgctaactggagattaatctctaagcttagtaagttacaact 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 27832 - 27789
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  27832 catgctaactggagattaatctctaagcttagcaagttgcaact 27789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 45949 - 45906
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  45949 catgctaactggagattaatctataagcttagtaagttacaact 45906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 19163131 - 19163174
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  19163131 catgctaactggagattaatctctaaacttagcaagttacaact 19163174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 21127770 - 21127851
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||| ||||| | ||||||||| |||||||||||||||    
T  21127770 tgataagaaatggatgtggcacagaaggttgggacatgctaactggaggttaatttctaagcttagtaagttacaactggtt 21127851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 17718511 - 17718468
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||    
T  17718511 catgctaactggagattaatctctaaacttagtaagttacaact 17718468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 22652079 - 22652036
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||    
T  22652079 catgctaactagagattaatctctaaacttagcaagttacaact 22652036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 21209220 - 21209261
Alignment:
Q  44 tgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  21209220 tgctaactggaggttaatctctaagcttagtaagttacaact 21209261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 911 - 957
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactggt 88  Q
    |||||||||||||||||||||| ||||||||| |||| |||||||||    
T  911 catgctaactggagattaatctctaagcttagtaagtaacaactggt 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 5189 - 5112
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| ||||| ||  || ||| |  |||||||||||||||||||| | ||||||||| |||||||||||    
T  5189 tgataagaaatggatgtggcacagaaggttgggacatgctaactggagattaatatctaagcttagtaagttacaact 5112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 5762 - 5681
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  || ||||||| ||||||||||| ||||||||| |||||||||||||||    
T  5762 tgataagaaatggatgtggcacagaaggttgggacaagctaactagagattaatctctaagcttagtaagttacaactggtt 5681  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 26760244 - 26760163
Alignment:
Q  8 tgataagaaatggttgtgggaccaaaagtttgagcatgctaactggagattaatctttaagcttagcaagttacaactggtt 89  Q
    ||||||||||||| ||||| ||  || ||| |  ||||||||| ||||  |||||| |||||||||||||||||||||||||    
T  26760244 tgataagaaatggatgtggcacagaaggttgggacatgctaaccggaggctaatctctaagcttagcaagttacaactggtt 26760163  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 23485513 - 23485470
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||    
T  23485513 catgctaactagagattaatctctaaacttagcaagttacaact 23485470  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 19467502 - 19467546
Alignment:
Q  41 gcatgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||||    
T  19467502 gcatgctaattggagattaatctctaaaattagcaagttacaact 19467546  T

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Target: scaffold0682 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 5481 - 5524
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||    
T  5481 catgctaactggaggttaatctctaagcttagcaagttgcaact 5524  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 13542 - 13585
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||    
T  13542 catgctaactggatattaatctctaagcttagtaagttacaact 13585  T

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Target: scaffold0161; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 18215 - 18258
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||    
T  18215 catgctaactggatattaatctctaagcttagtaagttacaact 18258  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 46592 - 46635
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||| | ||||||||| |||||||||||    
T  46592 catgctaactggagattaatttctaagcttagtaagttacaact 46635  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 135133 - 135090
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaact 85  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||    
T  135133 catgctaactggagattaatctctaagcttagtaagttgcaact 135090  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 43218 - 43173
Alignment:
Q  42 catgctaactggagattaatctttaagcttagcaagttacaactgg 87  Q
    |||||||||||||||| ||||| |||| |||| |||||||||||||    
T  43218 catgctaactggagataaatctctaagtttagtaagttacaactgg 43173  T

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