View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1532_high_50 (Length: 316)
Name: NF1532_high_50
Description: NF1532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1532_high_50 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 30 - 306
Target Start/End: Original strand, 43168911 - 43169187
Alignment:
| Q |
30 |
attcgagtatatgccggatggttcagaagttggtaaacacggtgaaacagatggatcccaaggatccttttcgagttgatatgactgataagcttttgga |
129 |
Q |
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| T |
43168911 |
attcgagtatatgccggatggttcagaagttggtaaacacggtgaaacagatggatcccaaggatccttttcgagttgatatgactgataagcttttgga |
43169010 |
T |
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| Q |
130 |
aaaactgtaagttcactttttgaagttcaaagtttaaacatatttgatttcagtaattaatattggtttcataattatggttactgctatatgtcataat |
229 |
Q |
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| T |
43169011 |
aaaactgtaagttcactttttgaagttcaaagtttaaacatatttgatttcagtaattaatattgttttcataattatggttactgctatatgtcataat |
43169110 |
T |
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| Q |
230 |
tattcacgttttccatctttcttttgacataatttattgtttagtgttgttccatgacacccccaaatctatctgtg |
306 |
Q |
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| T |
43169111 |
tattcacgttttccatctttcttttgacataatttattgtttagtgttgttccatgacacccccaaatctatctgtg |
43169187 |
T |
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