View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1532_low_104 (Length: 266)

Name: NF1532_low_104
Description: NF1532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1532_low_104
NF1532_low_104
[»] chr6 (52 HSPs)
chr6 (1-214)||(16207197-16207414)
chr6 (84-219)||(22600927-22601062)
chr6 (84-219)||(5399606-5399741)
chr6 (102-219)||(13216945-13217062)
chr6 (84-219)||(25968941-25969077)
chr6 (102-217)||(29093924-29094039)
chr6 (84-217)||(25964296-25964430)
chr6 (84-219)||(17793549-17793684)
chr6 (84-219)||(6795319-6795455)
chr6 (84-219)||(3924018-3924153)
chr6 (167-215)||(1176842-1176890)
chr6 (84-219)||(20435622-20435758)
chr6 (84-219)||(23509968-23510104)
chr6 (84-219)||(26822236-26822371)
chr6 (84-219)||(28733710-28733845)
chr6 (137-219)||(20221566-20221648)
chr6 (137-215)||(20225465-20225543)
chr6 (137-219)||(22115550-22115632)
chr6 (137-215)||(22119449-22119527)
chr6 (102-219)||(19695790-19695907)
chr6 (171-219)||(25030875-25030923)
chr6 (96-215)||(26157715-26157835)
chr6 (167-219)||(31965170-31965222)
chr6 (168-219)||(14893811-14893862)
chr6 (137-216)||(15172606-15172685)
chr6 (137-216)||(15470790-15470869)
chr6 (85-219)||(25949700-25949835)
chr6 (84-219)||(8603879-8604015)
chr6 (84-200)||(23346751-23346867)
chr6 (96-219)||(25507969-25508093)
chr6 (96-219)||(26139042-26139166)
chr6 (84-219)||(26474329-26474465)
chr6 (84-219)||(24392466-24392601)
chr6 (84-219)||(28720895-28721030)
chr6 (102-219)||(5152219-5152337)
chr6 (102-219)||(14991869-14991984)
chr6 (102-219)||(19614786-19614903)
chr6 (102-219)||(25775417-25775535)
chr6 (167-219)||(4741363-4741416)
chr6 (84-219)||(19612307-19612443)
chr6 (84-219)||(20105200-20105336)
chr6 (84-219)||(20464753-20464889)
chr6 (96-199)||(26018358-26018462)
chr6 (96-219)||(29254363-29254487)
chr6 (102-219)||(18449154-18449272)
chr6 (102-219)||(18627811-18627929)
chr6 (102-219)||(18993540-18993658)
chr6 (102-219)||(19966240-19966358)
chr6 (166-219)||(25923037-25923091)
chr6 (137-219)||(29682985-29683067)
chr6 (167-208)||(12660100-12660141)
chr6 (167-208)||(18974047-18974088)
[»] chr1 (18 HSPs)
chr1 (84-219)||(25404654-25404789)
chr1 (102-219)||(20412631-20412748)
chr1 (84-219)||(16148020-16148155)
chr1 (84-219)||(20898226-20898361)
chr1 (84-219)||(23299268-23299403)
chr1 (85-209)||(16384528-16384652)
chr1 (84-219)||(28208262-28208398)
chr1 (84-219)||(16880124-16880260)
chr1 (84-214)||(46143116-46143247)
chr1 (169-219)||(26194609-26194659)
chr1 (84-215)||(41802655-41802787)
chr1 (167-219)||(28763530-28763583)
chr1 (167-219)||(12059434-12059486)
chr1 (84-219)||(16354465-16354601)
chr1 (167-199)||(20448807-20448839)
chr1 (167-199)||(20534573-20534605)
chr1 (102-219)||(19365013-19365131)
chr1 (106-219)||(21240442-21240556)
[»] chr7 (34 HSPs)
chr7 (102-219)||(46274475-46274592)
chr7 (84-219)||(1614294-1614429)
chr7 (84-219)||(4465359-4465494)
chr7 (84-219)||(11483430-11483565)
chr7 (102-219)||(1464129-1464246)
chr7 (84-208)||(17206127-17206251)
chr7 (84-219)||(4460369-4460504)
chr7 (84-219)||(4541547-4541682)
chr7 (84-219)||(16896837-16896972)
chr7 (84-217)||(3376088-3376222)
chr7 (126-219)||(30063578-30063671)
chr7 (104-219)||(17911964-17912079)
chr7 (84-217)||(39271538-39271672)
chr7 (102-219)||(8521751-8521869)
chr7 (102-219)||(22579006-22579124)
chr7 (102-219)||(23292342-23292459)
chr7 (102-219)||(38387745-38387863)
chr7 (84-219)||(48713827-48713963)
chr7 (167-218)||(4256270-4256321)
chr7 (102-219)||(782363-782481)
chr7 (84-218)||(4982727-4982856)
chr7 (137-219)||(15523406-15523488)
chr7 (102-219)||(20624981-20625099)
chr7 (102-219)||(34391002-34391120)
chr7 (137-219)||(38877783-38877865)
chr7 (167-219)||(2307237-2307290)
chr7 (96-208)||(8780032-8780145)
chr7 (96-219)||(8786871-8786995)
chr7 (141-199)||(12348371-12348429)
chr7 (102-219)||(12568016-12568134)
chr7 (102-215)||(15706839-15706953)
chr7 (167-219)||(19515019-19515072)
chr7 (167-219)||(21005180-21005233)
chr7 (167-219)||(39389115-39389168)
[»] chr4 (18 HSPs)
chr4 (84-219)||(12345531-12345666)
chr4 (85-219)||(11922019-11922153)
chr4 (84-219)||(10731515-10731650)
chr4 (84-219)||(10945284-10945419)
chr4 (84-219)||(33330584-33330719)
chr4 (84-219)||(16953498-16953633)
chr4 (84-219)||(20058740-20058876)
chr4 (84-219)||(25190564-25190699)
chr4 (102-219)||(5675849-5675966)
chr4 (84-219)||(8561892-8562027)
chr4 (102-219)||(31594265-31594383)
chr4 (102-219)||(17996514-17996632)
chr4 (102-219)||(43701165-43701283)
chr4 (84-208)||(9192628-9192753)
chr4 (102-219)||(21275632-21275750)
chr4 (167-218)||(3771847-3771899)
chr4 (85-219)||(39043064-39043199)
chr4 (102-219)||(24124823-24124941)
[»] chr5 (15 HSPs)
chr5 (102-215)||(20724441-20724554)
chr5 (84-219)||(20169047-20169183)
chr5 (84-219)||(21390049-21390185)
chr5 (102-219)||(21382657-21382775)
chr5 (134-219)||(24166641-24166726)
chr5 (169-219)||(23029228-23029278)
chr5 (84-219)||(12410906-12411042)
chr5 (88-215)||(19890125-19890253)
chr5 (84-219)||(21833306-21833442)
chr5 (83-219)||(22171166-22171302)
chr5 (84-215)||(16677462-16677593)
chr5 (84-219)||(24165633-24165769)
chr5 (88-219)||(31414861-31414993)
chr5 (167-217)||(20738724-20738775)
chr5 (167-219)||(34222788-34222841)
[»] chr2 (20 HSPs)
chr2 (102-218)||(29576940-29577056)
chr2 (84-219)||(20980-21115)
chr2 (84-219)||(21344109-21344244)
chr2 (103-215)||(24609663-24609775)
chr2 (84-219)||(24322175-24322310)
chr2 (84-219)||(23340944-23341079)
chr2 (84-219)||(539575-539711)
chr2 (84-219)||(19012584-19012719)
chr2 (84-219)||(24177269-24177404)
chr2 (126-219)||(20852505-20852598)
chr2 (102-218)||(29563572-29563689)
chr2 (84-201)||(23704675-23704794)
chr2 (102-219)||(20636041-20636159)
chr2 (167-219)||(24371098-24371150)
chr2 (102-219)||(23613734-23613852)
chr2 (102-219)||(24172373-24172491)
chr2 (146-219)||(23256655-23256728)
chr2 (167-219)||(25858244-25858297)
chr2 (176-219)||(24365985-24366028)
chr2 (84-208)||(44998635-44998760)
[»] chr3 (31 HSPs)
chr3 (84-219)||(40846856-40846991)
chr3 (84-202)||(20224804-20224922)
chr3 (104-219)||(11827006-11827121)
chr3 (84-219)||(17023619-17023754)
chr3 (102-219)||(8532271-8532388)
chr3 (84-219)||(17775164-17775299)
chr3 (84-219)||(19076465-19076600)
chr3 (83-219)||(13605419-13605556)
chr3 (84-219)||(3212837-3212973)
chr3 (84-219)||(11399260-11399396)
chr3 (84-219)||(25055398-25055534)
chr3 (84-219)||(36079444-36079580)
chr3 (84-219)||(13070153-13070288)
chr3 (102-219)||(3280215-3280333)
chr3 (102-219)||(27407593-27407710)
chr3 (102-219)||(19566587-19566705)
chr3 (104-219)||(14347674-14347790)
chr3 (102-215)||(13418774-13418888)
chr3 (167-219)||(11577406-11577459)
chr3 (102-219)||(14444839-14444957)
chr3 (102-219)||(14456886-14457004)
chr3 (102-219)||(17209964-17210082)
chr3 (102-219)||(20150886-20151004)
chr3 (167-219)||(8685502-8685554)
chr3 (96-219)||(17051113-17051237)
chr3 (102-219)||(14137343-14137462)
chr3 (102-219)||(19655690-19655808)
chr3 (84-219)||(1993831-1993967)
chr3 (84-219)||(1998990-1999126)
chr3 (127-219)||(27992106-27992198)
chr3 (171-219)||(42244209-42244257)
[»] scaffold0213 (1 HSPs)
scaffold0213 (102-219)||(21976-22093)
[»] scaffold0197 (1 HSPs)
scaffold0197 (85-219)||(8401-8536)
[»] scaffold0001 (5 HSPs)
scaffold0001 (104-219)||(82201-82316)
scaffold0001 (103-219)||(33256-33371)
scaffold0001 (103-219)||(38563-38678)
scaffold0001 (84-215)||(521135-521266)
scaffold0001 (102-219)||(159448-159566)
[»] scaffold0049 (1 HSPs)
scaffold0049 (84-219)||(14187-14323)
[»] scaffold1092 (1 HSPs)
scaffold1092 (84-219)||(1278-1414)
[»] scaffold1058 (1 HSPs)
scaffold1058 (84-219)||(2655-2791)
[»] scaffold0098 (2 HSPs)
scaffold0098 (84-219)||(43883-44019)
scaffold0098 (175-219)||(4472-4516)
[»] scaffold0123 (1 HSPs)
scaffold0123 (102-219)||(14472-14589)
[»] chr8 (14 HSPs)
chr8 (138-219)||(24221180-24221261)
chr8 (84-219)||(6280128-6280264)
chr8 (106-219)||(26013312-26013426)
chr8 (106-219)||(21319804-21319917)
chr8 (94-219)||(19791811-19791936)
chr8 (102-219)||(23193530-23193648)
chr8 (146-219)||(18008502-18008575)
chr8 (167-219)||(24967635-24967688)
chr8 (168-208)||(22904987-22905027)
chr8 (84-219)||(26854451-26854587)
chr8 (102-219)||(14821566-14821684)
chr8 (102-219)||(21140047-21140165)
chr8 (167-219)||(1990145-1990198)
chr8 (166-218)||(29004014-29004067)
[»] scaffold0278 (1 HSPs)
scaffold0278 (84-219)||(12115-12251)
[»] scaffold0713 (1 HSPs)
scaffold0713 (96-219)||(6290-6414)
[»] scaffold0011 (1 HSPs)
scaffold0011 (84-219)||(173121-173257)
[»] scaffold0674 (1 HSPs)
scaffold0674 (102-219)||(1380-1498)
[»] scaffold0855 (1 HSPs)
scaffold0855 (167-219)||(3847-3899)
[»] scaffold0847 (1 HSPs)
scaffold0847 (167-219)||(4012-4064)
[»] scaffold0773 (1 HSPs)
scaffold0773 (84-219)||(1496-1632)
[»] scaffold0058 (1 HSPs)
scaffold0058 (102-219)||(62171-62289)
[»] scaffold0264 (1 HSPs)
scaffold0264 (167-219)||(22079-22132)
[»] scaffold0258 (1 HSPs)
scaffold0258 (84-219)||(21240-21376)
[»] scaffold0074 (2 HSPs)
scaffold0074 (167-219)||(22394-22446)
scaffold0074 (84-219)||(53809-53945)
[»] scaffold0037 (2 HSPs)
scaffold0037 (176-219)||(83908-83951)
scaffold0037 (177-219)||(48779-48821)
[»] scaffold0471 (1 HSPs)
scaffold0471 (102-219)||(9411-9529)
[»] scaffold0150 (2 HSPs)
scaffold0150 (177-219)||(19744-19786)
scaffold0150 (177-219)||(26573-26615)
[»] scaffold0362 (1 HSPs)
scaffold0362 (168-219)||(8878-8930)
[»] scaffold0031 (1 HSPs)
scaffold0031 (84-219)||(100789-100925)


Alignment Details
Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16207197 - 16207414
Alignment:
Q  1 ccaactccacaacttcgataacgagagtttggtccttttctgtgtatttttatttttcgacccttaattacctctgcttgctcctcctttctgtttcatt 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | |    
T  16207197 ccaactccacaacttcgataacgagagtttggcccttttgtgtgtatttttatttttcgacccttaattagctctgcttgctcctcctttctgtcttagt 16207296  T
Q  101 aagtgtgtttctctagt----aatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagact 196  Q
    || |||||||||||||     || |||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||| |||||  |||||    
T  16207297 aattgtgtttctctagctagcaaccacgcctatttttataattgattgttattgaaatctttaaagtttgaaattttattatctcaatgtttgtcagact 16207396  T
Q  197 attttcttgttttgcaat 214  Q
    |||||| |||||||||||    
T  16207397 attttcatgttttgcaat 16207414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 22600927 - 22601062
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| ||||||| ||||||| || |||||||  |||||||||| || |||||  |||||||||||||||||    
T  22600927 ctcctttcggtctcagtgagtgtgtttctctagcaatcacgcctattttcatggttgatttctattgaaatccttgaagttcgaaactttattgtctcaa 22601026  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| ||||||||||    
T  22601027 ggtttgctagactattttcatgtttcgcaatccttg 22601062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 5399741 - 5399606
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| ||||||| ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||    
T  5399741 ctcctttcagtctcagtgagtgtgtttctctagcaatcacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaa 5399642  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| |||| |||||    
T  5399641 ggtttgctagactattttcatgtttcgcaacccttg 5399606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 13216945 - 13217062
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||  ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||||||||||    
T  13216945 agtgtgtttctctagcaaccacacctattttcatggttgattgctattgaaatcgttgaagctcgaaactttattgtctcaaggtttgctagactatttt 13217044  T
Q  202 cttgttttgcaatccttg 219  Q
      ||||||||||||||||    
T  13217045 tatgttttgcaatccttg 13217062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 25969077 - 25968941
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| ||||||| ||||||| || |||||||| ||||  |||| || |||||||||||||||| |||||||    
T  25969077 ctcctttcggtctcagtgagtgtgttcctctagcaatcacgcctattttcatggttgattgctattagaatccttgaagtttaaaactttatatgtctca 25968978  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||  ||||| ||||||||||    
T  25968977 aggtttgctagactatttttatgtttcgcaatccttg 25968941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 29094039 - 29093924
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  ||||||||||||||||||||||||||||||||||     
T  29094039 agtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactatttg 29093940  T
Q  202 cttgttttgcaatcct 217  Q
    | ||||| ||||||||    
T  29093939 catgtttcgcaatcct 29093924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 25964430 - 25964296
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| ||||||| ||||||| || |||||||| ||||  |||| || |||||||||||||||| |||||||    
T  25964430 ctcctttcggtctcagtgagtgtgttcctctagcaatcacgcctattttcatggttgattgctattagaatccttgaagtttaaaactttatatgtctca 25964331  T
Q  183 aggtttgctagactattttcttgttttgcaatcct 217  Q
    |||||||||||||||||||  ||||| ||||||||    
T  25964330 aggtttgctagactattttaatgtttcgcaatcct 25964296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 17793549 - 17793684
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    ||||||||||||||| | ||||||||||||||| || |||| ||||| | || |||||||| |||||||||| || |||   | || |||||||||||||    
T  17793549 ctcctttctgtttcagtgagtgtgtttctctagaaaccacgcctattctcatggttgattgctattgaaatccttgaagcacataaatttattgtctcaa 17793648  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||  | | ||||||||||||||    
T  17793649 ggtttgctagactattcacatattttgcaatccttg 17793684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 6795455 - 6795319
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||  ||||||| || |||||||| ||||  |||| || ||||| |||||||||| |||||||    
T  6795455 ctcctttcggtctcaatgagtgtgttcctctagcaaccacacctattttcatggttgattgctattagaatccttgaagttcaaaactttatatgtctca 6795356  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  6795355 aggtttgctagactattttcatgtttcgcaatccttg 6795319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 3924153 - 3924018
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||  |||||| | |||||||| |||||| || |||||||||| | || |||||||| ||||  |||| || |||    |||||||||||||||||    
T  3924153 ctccttttggtttcagtgagtgtgttcctctagcaaccacgtctattctcatggttgattgctattagaatccttgaagaacgaaactttattgtctcaa 3924054  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || ||||| ||||||||||    
T  3924053 ggtttgctagactattctcatgtttcgcaatccttg 3924018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 1176890 - 1176842
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatc 215  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1176890 aaactttattgtctcaaggtttgctagactattttcatgttttgcaatc 1176842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 20435758 - 20435622
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||| |||||||||| |||||| || ||||  |||| | || |||||||| ||||| |||| || |||   ||||||||||| ||||||    
T  20435758 ctcctttcggtttcagtaagtgtgttcctctagcaaccacgcatattctcatggttgattgctattggaatccttgaagaacaaaactttatttgtctca 20435659  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    || |||||||||||||| || ||||| ||||||||||    
T  20435658 agctttgctagactattctcatgtttcgcaatccttg 20435622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 23509968 - 23510104
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||  |||||||||| |||||| || |||||||||| | || |||||||| ||||  |||| || |||    |||||||||| ||||||    
T  23509968 ctcctttcggtttcggtaagtgtgttgctctagcaaccacgtctattctcatggttgattgctattagaatccttgaagaacgaaactttatttgtctca 23510067  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||| ||||||||| || ||||||||||||||||    
T  23510068 aggtttgttagactattctcatgttttgcaatccttg 23510104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 26822371 - 26822236
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | |||||||| ||||||  | |||| ||||| | || |||||||| ||||| |||| ||  ||    |||||||||||||||||    
T  26822371 ctcctttcggtttcagtgagtgtgttcctctagctaccacgcctattctcatggttgattgctattggaatccttgtagaacgaaactttattgtctcaa 26822272  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||| || ||||||||||||||||    
T  26822271 ggtttgctaaactattctcatgttttgcaatccttg 26822236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 28733710 - 28733845
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||    |||||||||||||||||    
T  28733710 ctcctttcggtttcagtgagtgtgttcctctagcaaccacgcctattatcatggttgattgctattagaatccttgaagaacgaaactttattgtctcaa 28733809  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    | |||||||||||||| || ||||| ||||||||||    
T  28733810 gatttgctagactattctcatgtttcgcaatccttg 28733845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 20221648 - 20221566
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||| | || ||||   ||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  20221648 gttgattgctattgaaaccctttaagtacgaaactttattgtctcaaggtttgctagactattctcatgtttcgcaatccttg 20221566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 20225543 - 20225465
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatc 215  Q
    ||||||||||||||||| | || ||||   ||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  20225543 gttgattgttattgaaaccctttaagtaagaaactttattgtctcaaggtttgctagactattctcatgtttcgcaatc 20225465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 22115632 - 22115550
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||| | || ||||   ||||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  22115632 gttgattgctattgaaaccctttaagtacgaaactttattgtctcaaggtttgctagactattctcatgtttcgcaatccttg 22115550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 22119527 - 22119449
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatc 215  Q
    ||||||||||||||||| | || ||||   ||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  22119527 gttgattgttattgaaaccctttaagtaagaaactttattgtctcaaggtttgctagactattctcatgtttcgcaatc 22119449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 19695907 - 19695790
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||| ||||| ||| || |||| ||||| | || |||||||| |||||||||| || |||    ||||||||||||||||||||||||||||||||  |    
T  19695907 agtgtctttctgtagcaaccacgcctattctcatggttgattgctattgaaatccttgaagcacgaaactttattgtctcaaggtttgctagactatcgt 19695808  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||| ||||||||||    
T  19695807 catgtttcgcaatccttg 19695790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 25030875 - 25030923
Alignment:
Q  171 tttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  25030875 tttattgtctcaaggtttgctagactattctcatgttttgcaatccttg 25030923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 26157835 - 26157715
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||| ||||| | || |||||||||||||  |||| || |||   |||||||||| |||||||||||||||||||    
T  26157835 tcattgagtgtgttcctctagcaaccacgcctattctcatggttgattgttattagaatccttgaagaacaaaactttatgtgtctcaaggtttgctaga 26157736  T
Q  195 ctattttcttgttttgcaatc 215  Q
    |||||||| | ||| ||||||    
T  26157735 ctattttcatttttcgcaatc 26157715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 31965170 - 31965222
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  31965170 aaactttattgtctcaacgtttgctagactattatcatgttttgcaatccttg 31965222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 14893862 - 14893811
Alignment:
Q  168 aactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  14893862 aactttattgtctgaaggtttgctagactattctcatgttttgcaatccttg 14893811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 15172685 - 15172606
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatcc 216  Q
    |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||| |||| || ||||| |||||||    
T  15172685 gttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagattattgtcatgtttcgcaatcc 15172606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 15470790 - 15470869
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatcc 216  Q
    |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||| |||| || ||||| |||||||    
T  15470790 gttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagattattgtcatgtttcgcaatcc 15470869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 25949835 - 25949700
Alignment:
Q  85 tcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaa 183  Q
    ||||||| || ||| | |||||||| ||| || ||||||| ||||||| || | | | || ||||  |||| || ||||| |||||||||| ||||||||    
T  25949835 tcctttcagtctcaatgagtgtgttcctcaagcaatcacgcctattttcatggattactgctattagaatccttgaagttcaaaactttatatgtctcaa 25949736  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| |||||  |||||||||    
T  25949735 ggtttgctagactattttcatgtttcacaatccttg 25949700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 8604015 - 8603879
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || ||||||||   ||| |||| || ||| |  ||||||||| ||||| |    
T  8604015 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgcctttggaatccttgaagctcgaaactttatgtgtctga 8603916  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| |||||  |||||||||    
T  8603915 aggtttgctagactattttcatgtttcacaatccttg 8603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 23346751 - 23346867
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | |||||||| ||| || || |||| ||||| | |  |||||||| ||||| |||| || |||   ||||||||||||||| ||    
T  23346751 ctcctttcggtttcagtgagtgtgttcctcaagcaaccacgcctattctcaaggttgattgctattggaatcctttaagaacaaaactttattgtctaaa 23346850  T
Q  184 ggtttgctagactattt 200  Q
    |||||||||||||||||    
T  23346851 ggtttgctagactattt 23346867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 25508093 - 25507969
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| ||||||   |||| | || |||||||||||||  |||| || |||    ||||||||| |||||||||||||||||||    
T  25508093 tcattgagtgtgttcctctagcaatcactcttattctcatggttgattgttattagaatccttgaagaacgaaactttatgtgtctcaaggtttgctaga 25507994  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || ||||| ||||||||||    
T  25507993 ctattatcatgtttcgcaatccttg 25507969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 26139166 - 26139042
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||| ||||| | || |||||||||||||  |||| || |||   |||||||||| | |||||||||||||||||    
T  26139166 tcattgagtgtgttcctctagcaaccacgcctattctcatggttgattgttattagaatccttgaagaacaaaactttatgtttctcaaggtttgctaga 26139067  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || | ||| ||||||||||    
T  26139066 ctattctcatatttcgcaatccttg 26139042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 26474465 - 26474329
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||  ||||||| ||||| | || |||||||| ||||  |||| || |||||  ||||||||| |||| ||    
T  26474465 ctcctttcggtctcagtgagtgtgttcctctaacaatcacgcctattatcatggttgattgctattagaatccttgaagttcgaaactttatatgtccca 26474366  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || ||||| ||||| ||||    
T  26474365 aggtttgctagactattctcatgtttcgcaattcttg 26474329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 24392466 - 24392601
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||| ||||  ||| || |||| ||||| | || |||||||| |||||||| | || |||   ||||||||||||||||||    
T  24392466 ctcctttcggtctcagtgagtgtatttcattagcaaccacgcctattctcatggttgattgctattgaaacccttgaagcacaaaactttattgtctcaa 24392565  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||| |||| || |||||  |||||||||    
T  24392566 ggtttgctagattattctcatgtttcacaatccttg 24392601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 28720895 - 28721030
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||| | | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||    |||||||||||||||||    
T  28720895 ctcctttcagttttagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattagaatccttgaagaacgaaactttattgtctcaa 28720994  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    | |||||||||| ||| || ||||| ||||||||||    
T  28720995 gatttgctagacaattctcatgtttcgcaatccttg 28721030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 5152219 - 5152337
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| ||||||||| |||  ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  5152219 agtgtgttcctctagtaagcacacctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 5152318  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  5152319 tcatgtttcgcaatccttg 5152337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 14991869 - 14991984
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||  || |||| ||||||| || |||||||| ||||||||   || ||| |  |||| |||||  ||||||||| |||||||||||||    
T  14991869 agtgtgtttctctatcaaccacgcctattttcatggttgattgctattgaaaatcttgaagatcgaaacattatt--ctcaaggttagctagactatttt 14991966  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||| ||||||||||    
T  14991967 catgtttcgcaatccttg 14991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 19614786 - 19614903
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    ||||| || |||||| || |||| ||||||| || |||||||| ||||  |||| || | |||  ||||||||| |||| ||||||||||||||||||||    
T  19614786 agtgttttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgacgttcgaaactttatatgtc-caaggtttgctagactattt 19614884  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  19614885 tcatgtttcgcaatccttg 19614903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 25775535 - 25775417
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| ||  ||| |||||||  | |||||||| ||||  |||| || |||||  ||||||||| |||| ||||||||||||||||||||    
T  25775535 agtgtgttcctctagcaacaacgcctattttcttggttgattgctattagaatccttgaagttcgaaactttatatgtcccaaggtttgctagactattt 25775436  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  25775435 tcatgtttcacaatccttg 25775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 4741416 - 4741363
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| ||||||||||    
T  4741416 aaactttatatgtctcaaggtttgctagactattctcatgtttcgcaatccttg 4741363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 19612307 - 19612443
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| | ||  |||| || |||    |||||||||| ||||||    
T  19612307 ctcctttcagtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctcttagaatccttgaagaacgaaactttatttgtctca 19612406  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || |||||  |||||||||    
T  19612407 aggtttgctagactattctcatgtttcacaatccttg 19612443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 20105200 - 20105336
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | ||||||||  ||||| || ||||||||||   || |||||||| ||||  |||| || |||   |||||||||| |||||||    
T  20105200 ctcctttcggtctcagtgagtgtgttcttctagcaaccacgtctattcccatggttgattgctattagaatccttgaagaacaaaactttatatgtctca 20105299  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || ||||| |||| |||||    
T  20105300 aggtttgctagactattctcatgtttcgcaacccttg 20105336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 20464889 - 20464753
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||  |||||| |||| ||||| | || ||| |||| |||||||  | || |||  | |||||||||||||||||    
T  20464889 ctcctttcggtctcaatgagtgtgtttcgttagtaaccacgcctattctcatggttaattgctattgaatcccttgaagcatgaaactttattgtctcaa 20464790  T
Q  184 ggtttgcta-gactattttcttgttttgcaatccttg 219  Q
    ||||| ||| ||||||| || ||||||| ||||||||    
T  20464789 ggttttctaggactattctcatgttttgaaatccttg 20464753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 199
Target Start/End: Complemental strand, 26018462 - 26018358
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||| ||||| | || |||||||||||||  |||| || |||    ||||||||| |||||||||||||||||||    
T  26018462 tcattgagtgtgttcctctagcaaccacgcctattctcatggttgattgttattagaatccttgaagaacgaaactttatgtgtctcaaggtttgctaga 26018363  T
Q  195 ctatt 199  Q
    |||||    
T  26018362 ctatt 26018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 29254487 - 29254363
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||| ||||||| || |||||||| ||||  ||||  | |||    ||||||||| |||||||||||||||||||    
T  29254487 tcattgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccatgaagaacgaaactttatgtgtctcaaggtttgctaga 29254388  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || |||||  |||||||||    
T  29254387 ctattctcatgtttctcaatccttg 29254363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18449272 - 18449154
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || ||||||   ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  18449272 agtgtgttcctctagcaagcacgcctattttcatggttgatcactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 18449173  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  18449172 tcatgtttcgcaatccttg 18449154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18627929 - 18627811
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||  || |||| ||||| | || |||||||| ||||  |||| || |||  | |||||||||| |||||||||||||||||||||||     
T  18627929 agtgtgttcctctaacaaccacgcctattctcatggttgattgctattagaatccttgaagaatgaaactttatttgtctcaaggtttgctagactattc 18627830  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  18627829 tcatgtttcacaatccttg 18627811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 18993658 - 18993540
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    |||||||||| ||||||||||||||||||| |||     
T  18993658 agtgtgttcctctagcaaccacgcctattctcatggttgattggtattggaatccttgaagaacgaaactttatttgtctcaaggtttgctagaccattc 18993559  T
Q  201 tcttgttttgcaatccttg 219  Q
    |  ||||| ||||||||||    
T  18993558 ttatgtttcgcaatccttg 18993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 19966240 - 19966358
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || || | ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  19966240 agtgtgttcctctagcaagcatgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 19966339  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  19966340 tcatgtttcgcaatccttg 19966358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 25923037 - 25923091
Alignment:
Q  166 aaaactttatt-gtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||| |||||||||||||||| |||||| || ||||| ||||||||||    
T  25923037 aaaactttatttgtctcaaggtttgctacactattctcatgtttcgcaatccttg 25923091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 29683067 - 29682985
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||| | || ||||   ||||||||||||||  ||||||||||||||||| || ||||| ||| ||||||    
T  29683067 gttgattgctattgaaaccctttaagtacgaaactttattgtcttgaggtttgctagactattatcatgtttcgcagtccttg 29682985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 12660100 - 12660141
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttt 208  Q
    ||||||| ||||||||||||||||||||||||| || |||||    
T  12660100 aaactttcttgtctcaaggtttgctagactattctcatgttt 12660141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 18974088 - 18974047
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttt 208  Q
    |||||||||||||||||||||||||||| |||| || |||||    
T  18974088 aaactttattgtctcaaggtttgctagattattctcatgttt 18974047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 25404654 - 25404789
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| || |||| ||||||||||| |||||||||| || ||| | ||||||||||||||||||    
T  25404654 ctcctttcggtctcagtgagtgtgtttctctagaaaccacgcctgttttcatagttgattgctattgaaatccttgaagctcaaaactttattgtctcaa 25404753  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||||||||| ||||    
T  25404754 ggtttgctagactattttcatgttttgcaattcttg 25404789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20412748 - 20412631
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||  ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||||||||||    
T  20412748 agtgtgtttctctagcaaccacacctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactatttt 20412649  T
Q  202 cttgttttgcaatccttg 219  Q
    | |||||  |||||||||    
T  20412648 catgtttcacaatccttg 20412631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 16148020 - 16148155
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| |  ||||||| |||||| || |||| ||||| | || |||||||| ||||  ||||||| |||    |||||||||||||||||    
T  16148020 ctcctttcagtttcagtgtgtgtgttcctctagcaaccacgcctattctcatggttgattgctattataatctttgaagaacgaaactttattgtctcaa 16148119  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || ||||||||||||||||    
T  16148120 ggtttgctagactattatcatgttttgcaatccttg 16148155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 20898226 - 20898361
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||| | || |||| ||||||| || ||||| || |||||||||| || ||| |  |||||||||||||||||    
T  20898226 ctcctttcggtctcagtgagtgtgtttctctggcaaccacgcctattttcatggttgaatgctattgaaatcattgaagctcgaaactttattgtctcaa 20898325  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||  |||||  |||||||||    
T  20898326 ggtttgctagactatttttatgtttcacaatccttg 20898361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 23299403 - 23299268
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||| ||| || ||| |||||||| || |||||||  |||||||||| || ||  |  |||||||||||||||||    
T  23299403 ctcctttcggtgtcagtgagtgtgtttctttagcaaccacttctattttcatggttgattagtattgaaatccttgaatctcgaaactttattgtctcaa 23299304  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| |||||  |||||||||    
T  23299303 ggtttgctagactattttcatgtttcacaatccttg 23299268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 16384528 - 16384652
Alignment:
Q  85 tcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaag 184  Q
    ||||||| || ||| | ||||||||||||||| ||||||  ||||| |||| |||||||| |||||||||| || |||     |||||||||||||||||    
T  16384528 tcctttcggtctcagtgagtgtgtttctctagcaatcacacctattcttatggttgattgctattgaaatccttgaagcacgcaactttattgtctcaag 16384627  T
Q  185 gtttgctagactattttcttgtttt 209  Q
    ||||||||||||||| || ||||||    
T  16384628 gtttgctagactattatcatgtttt 16384652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 28208398 - 28208262
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||    
T  28208398 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctca 28208299  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| || || ||||||||||    
T  28208298 aggtttgctagactattttcatgattcgcaatccttg 28208262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 16880260 - 16880124
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||  || |||||| ||||||||| |||| ||    
T  16880260 ctcctttcggtctcagtgagtgtgttactctagcaaccacgcctattctcatggttgattgctattagaattcttgaagtttgaaactttatatgtccca 16880161  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || ||||||||||||||||    
T  16880160 aggtttgctagactattctcatgttttgcaatccttg 16880124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 46143116 - 46143247
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| |||||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||||| || | || ||    
T  46143116 ctcctttcggtctcagtaagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaacttcatatatccca 46143215  T
Q  183 aggtttgctagactattttcttgttttgcaat 214  Q
    |||||||||||||||||||| ||||| |||||    
T  46143216 aggtttgctagactattttcatgtttcgcaat 46143247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 26194659 - 26194609
Alignment:
Q  169 actttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  26194659 actttattgtctcaaggtttgctagactattctcatgtttcgcaatccttg 26194609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 41802787 - 41802655
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||  ||||||| || |||||||| ||||  |||| || | |||  ||||||||| |||| ||    
T  41802787 ctcctttcggtctcagtgagtgtgttcctctagcaaccacacctattttcatggttgattgctattagaatccttgatgttcgaaactttatatgtccca 41802688  T
Q  183 aggtttgctagactattttcttgttttgcaatc 215  Q
    |||||||||||||||||||| ||||| ||||||    
T  41802687 aggtttgctagactattttcatgtttcgcaatc 41802655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 28763530 - 28763583
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||||| ||||||||    
T  28763530 aaactttatatgtctcaaggtttgctagactattctcatgttttgtaatccttg 28763583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 12059434 - 12059486
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| ||||||||||||||||| |||| || ||||| ||||||||||    
T  12059434 aaactttattttctcaaggtttgctagattattctcatgtttcgcaatccttg 12059486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 16354601 - 16354465
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||   |||| ||||| |||||||    
T  16354601 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattagaatccttgaagaacaaaattttatatgtctca 16354502  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || ||||| |||| |||||    
T  16354501 aggtttgctagactattctcatgtttcgcaacccttg 16354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 20448839 - 20448807
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactatt 199  Q
    |||||||||||||||||||||||||||||||||    
T  20448839 aaactttattgtctcaaggtttgctagactatt 20448807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 20534605 - 20534573
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactatt 199  Q
    |||||||||||||||||||||||||||||||||    
T  20534605 aaactttattgtctcaaggtttgctagactatt 20534573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 19365131 - 19365013
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||| | | || |||||||  ||||  |||| || |||||  ||||||||| |||| |||||||||||||||||||     
T  19365131 agtgtgttcctctagcaaccacgcctactctcatggttgattactattagaatccttgaagttcgaaactttatatgtcccaaggtttgctagactattc 19365032  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||| ||||||||    
T  19365031 tcatgttttgaaatccttg 19365013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 21240556 - 21240442
Alignment:
Q  106 tgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattg-tctcaaggtttgctagactattttctt 204  Q
    |||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||  | ||||||||||  ||||| |||||||||||||||| || |    
T  21240556 tgttcctctagcaaccacgactattctcatggttgattgctattggaatccttgaagaatgaaactttatttctctcagggtttgctagactattctcat 21240457  T
Q  205 gttttgcaatccttg 219  Q
    |||| ||||||||||    
T  21240456 gtttcgcaatccttg 21240442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 46274592 - 46274475
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| ||||||| ||||||| || |||||||| |||||||||| || |||||  ||||||||||||||||| |||||||||||||||||    
T  46274592 agtgtgtttctctagcaatcacgcctattttcatggttgattgctattgaaatccttgaagttcgaaactttattgtctcaaagtttgctagactatttt 46274493  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||| ||||||||||    
T  46274492 catgtttcgcaatccttg 46274475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 1614429 - 1614294
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || ||   ||||||| || ||||||||||||||||||| || |||||  |||||||||||||||||    
T  1614429 ctcctttcggtctcagtgagtgtgtttctctagcaaccatacctattttcatggttgattgttattgaaatccttgaagttcgaaactttattgtctcaa 1614330  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| ||||||||||    
T  1614329 ggtttgctagactattttcatgtttcgcaatccttg 1614294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 4465359 - 4465494
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || |||| | |||||||||||||||||    
T  4465359 ctcctttcagtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagtatgaaactttattgtctcaa 4465458  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
     |||||||| ||||||||| |||||| |||||||||    
T  4465459 agtttgctatactattttcatgttttacaatccttg 4465494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 11483430 - 11483565
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | |||||||||||| || || |||| ||||||| || ||| |||| |||||||||| || ||| |  |||||||||||||||||    
T  11483430 ctcctttcggtctcaatgagtgtgtttctccagaaaccacgcctattttcatggtttattgctattgaaatccttgaagctcgaaactttattgtctcaa 11483529  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11483530 ggtttgctagactattttcatgttttgcaatccttg 11483565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 1464246 - 1464129
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||| ||||||||| || ||||  |||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||||||||||    
T  1464246 agtgtttttctctagcaaccacgcatattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactatttt 1464147  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||||| ||||||||    
T  1464146 catgttttgtaatccttg 1464129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 208
Target Start/End: Original strand, 17206127 - 17206251
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | ||| ||||||||||| || |||||||||| | || |||||||| |||||||||| || ||| || |||||||| ||||||||    
T  17206127 ctcctttcggtttcagtgagtatgtttctctagcaaccacgtctattctcatggttgattgctattgaaatccttgaagcttgaaactttactgtctcaa 17206226  T
Q  184 ggtttgctagactattttcttgttt 208  Q
    |||||||||||||||| || |||||    
T  17206227 ggtttgctagactattctcatgttt 17206251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 4460369 - 4460504
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || || | ||||||| || |||||||| | |||||||| || ||| |  |||||||||||||||||    
T  4460369 ctcctttcggtctcagtgagtgtgtttctctagcaaccatgcctattttcatggttgattgcttttgaaatccttgaagctcgaaactttattgtctcaa 4460468  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| | ||||||||    
T  4460469 ggtttgctagactattttcatgtttcgaaatccttg 4460504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 4541682 - 4541547
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    ||||||||  ||||| | ||||||||||||| | || |||||||||| | || |||||||| ||||||||||  | |||    |||||||||||||||||    
T  4541682 ctcctttcaatttcaatgagtgtgtttctcttgcaaccacgtctattctcatggttgattgctattgaaatccatgaagaacgaaactttattgtctcaa 4541583  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || ||||||||||||||||    
T  4541582 ggtttgctagactattctcatgttttgcaatccttg 4541547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 16896837 - 16896972
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    ||||||||||| ||| | ||||||||||||||| ||||| | ||||||| || |||||||| |||||||||| || ||| |   ||||||||||||| ||    
T  16896837 ctcctttctgtctcagtgagtgtgtttctctagcaatcatgcctattttcatggttgattgctattgaaatccttgaagctcgtaactttattgtctgaa 16896936  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| ||||||||| | ||| ||||||||||    
T  16896937 ggtttgctaaactattttcatatttcgcaatccttg 16896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 217
Target Start/End: Original strand, 3376088 - 3376222
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||    
T  3376088 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctca 3376187  T
Q  183 aggtttgctagactattttcttgttttgcaatcct 217  Q
    |||||||||||||||||||| ||||| ||||||||    
T  3376188 aggtttgctagactattttcatgtttcgcaatcct 3376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 30063578 - 30063671
Alignment:
Q  126 ctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  30063578 ctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactattttcatttttcgcaatccttg 30063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 219
Target Start/End: Complemental strand, 17912079 - 17911964
Alignment:
Q  104 tgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttct 203  Q
    ||||||||||||| || | |  ||||||| || |||||||| |||||||||| || ||||   |||||||||| |||||||||||||||| ||||||||     
T  17912079 tgtgtttctctagcaaccgcacctattttcatggttgattgctattgaaatccttgaagtacgaaactttattatctcaaggtttgctaggctattttca 17911980  T
Q  204 tgttttgcaatccttg 219  Q
    ||||| ||||||||||    
T  17911979 tgtttcgcaatccttg 17911964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 39271672 - 39271538
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| ||| |||    
T  39271672 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtatca 39271573  T
Q  183 aggtttgctagactattttcttgttttgcaatcct 217  Q
    |||||||||||||||||||| ||||| ||||||||    
T  39271572 aggtttgctagactattttcatgtttcgcaatcct 39271538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 8521751 - 8521869
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||  ||||||  ||||||| || ||||||| |||||  |||| || |||||  ||||||||| |||||||||||||||||||||||||    
T  8521751 agtgtgttcctctaacaatcacacctattttcatggttgattattattagaatccttgaagttcgaaactttatatgtctcaaggtttgctagactattt 8521850  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  8521851 tcatgtttcacaatccttg 8521869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 22579124 - 22579006
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || ||||| |||||| ||| ||||||||||||  |||||||||||    
T  22579124 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcaaaactctatatgtctcaaggttcactagactattt 22579025  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  22579024 tcatgtttcgcaatccttg 22579006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 23292342 - 23292459
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||  ||||||| || |||||||| ||||  |||| || |||||  ||| ||||| |||| ||||||||||||||||||||    
T  23292342 agtgtgttcctctagcaaccacacctattttcatggttgattgctattagaatccttgaagttcgaaa-tttatatgtcccaaggtttgctagactattt 23292440  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||||||||||||    
T  23292441 tcatgttttgcaatccttg 23292459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 38387745 - 38387863
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgt-ctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || ||||||||||||||| |||||||  ||||  |||| || |||||  ||||| |||  | ||||||||| ||||||||||||    
T  38387745 agtgtgttcctctagcaagcacgtctatttttatggttgattactattataatccttgaagttcgaaactctataattctcaaggttcgctagactattt 38387844  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  38387845 tcatgtttcgcaatccttg 38387863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 48713963 - 48713827
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| || ||| || |||| ||||||| |  | |||||| ||||  |||| || |||||  ||||||||| |||||||    
T  48713963 ctcctttcggtctcagtgagtgtgttcctatagcaaccacgcctattttcaagggtgattgctattagaatccttgaagttcgaaactttatatgtctca 48713864  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| ||||||||| ||||| ||||||||||    
T  48713863 aggtttgctatactattttcatgtttcgcaatccttg 48713827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 4256270 - 4256321
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatcctt 218  Q
    ||||||||||||||||||||||||||||||||| || |||||  ||||||||    
T  4256270 aaactttattgtctcaaggtttgctagactattctcatgtttctcaatcctt 4256321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 782363 - 782481
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| |||  |||||||||||  |||||||||||    
T  782363 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctataagtctcaaggttcactagactattt 782462  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||||||||||||    
T  782463 tcatgttttgcaatccttg 782481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 4982727 - 4982856
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||||| ||||||     |||| || |||| ||||| | || |||||||| |||||||||| || |||    |||||||||||||||||    
T  4982727 ctcctttcggtttcattgagtgtg-----ctagcaaccacgcctattctcatggttgattgctattgaaatccttgaagaacgaaactttattgtctcaa 4982821  T
Q  184 ggtttgctagactattttcttgttttgcaatcctt 218  Q
    | ||| |||||||||| || ||||| |||||||||    
T  4982822 gattttctagactattctcatgtttcgcaatcctt 4982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 15523488 - 15523406
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||| | || ||||   ||| |||||||||||||||||||| |||||||| || |||| |||||||||||    
T  15523488 gttgattgatattgaaaccctttaagtacgaaattttattgtctcaaggtttgcaagactattctcatgttgtgcaatccttg 15523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20625099 - 20624981
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||||||||| |||  |||||||||||  |||||| ||||    
T  20625099 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagtttaaaactctataagtctcaaggttcactagacaattt 20625000  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  20624999 tcatgtttcgcaatccttg 20624981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 34391120 - 34391002
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  34391120 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 34391021  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  34391020 tcatgtttcgcaatccttg 34391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 219
Target Start/End: Complemental strand, 38877865 - 38877783
Alignment:
Q  137 gttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||| | || |||  | ||||||||||||||||| ||||||||||||||| |  ||||| ||||||||||    
T  38877865 gttgattgctattgaaaccctttaagaatgaaactttattgtctcaaagtttgctagactattctaatgtttcgcaatccttg 38877783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 2307290 - 2307237
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| ||||||||||    
T  2307290 aaactttatatgtctcaaggtttgctagactattctcatgtttcgcaatccttg 2307237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 8780032 - 8780145
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| ||||||||||||||| || |||| ||||| | || |||||||| ||||  |||| || |||    ||||||||| |||||||||||||||||||    
T  8780032 tcattgagtgtgtttctctagcaaccacgcctattctcatggttgattgctattcgaatccttgaagaacgaaactttatatgtctcaaggtttgctaga 8780131  T
Q  195 ctattttcttgttt 208  Q
    ||||| || |||||    
T  8780132 ctattctcatgttt 8780145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 8786871 - 8786995
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||    ||||||||| |||||||||||||||||||    
T  8786871 tcattgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattagaatccttgaagaacgaaactttatatgtctcaaggtttgctaga 8786970  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || ||||| |||| |||||    
T  8786971 ctattctcatgtttcgcaacccttg 8786995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 12348429 - 12348371
Alignment:
Q  141 attgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatt 199  Q
    |||| |||||||||| || ||||   |||||||||||||||||||||||| ||||||||    
T  12348429 attgctattgaaatcctttaagtacgaaactttattgtctcaaggtttgcaagactatt 12348371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 12568134 - 12568016
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| |||  |||||||||||  |||||||||||    
T  12568134 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctataagtctcaaggttcactagactattt 12568035  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  12568034 tcatgtttcgcaatccttg 12568016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 15706839 - 15706953
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||  ||||||| || |||||||  ||||  |||| || ||||| |||||| ||| ||||||||||||  |||||||||||    
T  15706839 agtgtgttcctctagcaagcacacctattttcatggttgattactattagaatcattgaagttcaaaactctatatgtctcaaggttcactagactattt 15706938  T
Q  201 tcttgttttgcaatc 215  Q
    || ||||| ||||||    
T  15706939 tcatgtttcgcaatc 15706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 19515019 - 19515072
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| ||||||||||||||||| |||||| || ||||| ||||||||||    
T  19515019 aaactttatgtgtctcaaggtttgctacactattctcatgtttcgcaatccttg 19515072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 21005180 - 21005233
Alignment:
Q  167 aaactttatt-gtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| ||||||||||||||||||||||| || |||||  |||||||||    
T  21005180 aaactttatttgtctcaaggtttgctagactattctcatgtttcacaatccttg 21005233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 39389168 - 39389115
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||| |||||    
T  39389168 aaactttatatgtctcaaggtttgctagactattctcatgtttcgcaacccttg 39389115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 12345531 - 12345666
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| | ||||||||||||||||||    
T  12345531 ctcctttcggtctcaatgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagctcaaaactttattgtctcaa 12345630  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| |||||  |||||||||    
T  12345631 ggtttgctagactattttcatgtttctcaatccttg 12345666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 11922019 - 11922153
Alignment:
Q  85 tcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaag 184  Q
    ||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  ||||||||||||||||||    
T  11922019 tcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatcattgaagctcgaaactttattgtctcaag 11922118  T
Q  185 gtttgctagactattttcttgttttgcaatccttg 219  Q
    |||| ||||||||||||| ||||||||||||||||    
T  11922119 gtttactagactattttcatgttttgcaatccttg 11922153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 10731650 - 10731515
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||    
T  10731650 ctcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatcgttgaagctcgaaactttattgtctcaa 10731551  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| |||| |||||    
T  10731550 ggtttgctagactattttcatgtttcgcaaaccttg 10731515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 10945419 - 10945284
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||    
T  10945419 ctcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatcgttgaagctcgaaactttattgtctcaa 10945320  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| |||| |||||    
T  10945319 ggtttgctagactattttcatgtttcgcaaaccttg 10945284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 33330584 - 33330719
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | ||||||||||||||| || ||| |||||| | || |||||||| |||||||||| || |||   ||||||||||||||||||    
T  33330584 ctcctttcggtttcagtgagtgtgtttctctagcaaccacatctattctcatggttgattgctattgaaatccttgaagcacaaaactttattgtctcaa 33330683  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
     ||||||||||||||| |  ||||||||||||||||    
T  33330684 cgtttgctagactattcttgtgttttgcaatccttg 33330719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 16953498 - 16953633
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | |||||||||||||||||| |||  || |||| || |||||||| |||||||||| || |||||  ||||||||||||| |||    
T  16953498 ctcctttcggtctcagtgagtgtgtttctctagtaaccacacctgttttcatggttgattgctattgaaatccttgaagttcgaaactttattgtcgcaa 16953597  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    | ||||||||||| ||||| ||||| ||||||||||    
T  16953598 gatttgctagactgttttcatgtttcgcaatccttg 16953633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 20058740 - 20058876
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || || | ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||    
T  20058740 ctcctttcggtctcactgagtgtgttcctctagcaaccatgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctca 20058839  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||||||||||||||    
T  20058840 aggtttgctagactattttcatgttttgcaatccttg 20058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 25190699 - 25190564
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    ||||||||||| ||| | ||||||||||||||| || |||| ||||| | || |||||||| ||| |||||| || | |    |||||||||||||||||    
T  25190699 ctcctttctgtctcagtgagtgtgtttctctagcaaccacgcctattctcatggttgattgctatcgaaatccttgaggcacgaaactttattgtctcaa 25190600  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || ||||| ||||||||||    
T  25190599 ggtttgctagactattctcatgtttcgcaatccttg 25190564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 5675966 - 5675849
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    |||||||||||| || || ||| | |||| | || |||||||| |||||||||| || |||  | |||||||||||||||| |||||||||||||||| |    
T  5675966 agtgtgtttctccagcaaccacttttattctcatggttgattgctattgaaatccttgaagaatgaaactttattgtctcatggtttgctagactattct 5675867  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||||||||| ||||    
T  5675866 catgttttgcaatacttg 5675849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 8561892 - 8562027
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | ||||| || |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    ||| |||||||||||||    
T  8561892 ctcctttcggtttcagtgagtgttttcctctagcaaccacgcctattctcatggttgattgctattggaatccttgaagaacgaaattttattgtctcaa 8561991  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || ||||| ||||||||||    
T  8561992 ggtttgctagactattatcatgtttcgcaatccttg 8562027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 31594383 - 31594265
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  || |||||| |||||||||||||||||||||||||    
T  31594383 agtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaagctttatatgtctcaaggtttgctagactattt 31594284  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  31594283 tcatgtttcacaatccttg 31594265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 17996632 - 17996514
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||| ||||| ||| ||||||||||||  |||||||||||    
T  17996632 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagtttgaaactctatatgtctcaaggttcactagactattt 17996533  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  17996532 tcatgtttcgcaatccttg 17996514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 43701165 - 43701283
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||| | |||||| || ||||  |||||| || |||| ||| ||||  |||| || |||||  ||||||||| |||||||||||||||||||||||||    
T  43701165 agtgtggtcctctagcaaccacgcatattttcatggttggttgctattagaatcattgaagttcgaaactttatatgtctcaaggtttgctagactattt 43701264  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  43701265 tcatgtttcgcaatccttg 43701283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 9192753 - 9192628
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| |||   |||||||||||    |||||||||| ||||||    
T  9192753 ctcctttcggtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctataagaatctttaaagaacgaaactttatttgtctca 9192654  T
Q  183 aggtttgctagactattttcttgttt 208  Q
    ||||||||||||||||| || |||||    
T  9192653 aggtttgctagactattctcatgttt 9192628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 21275750 - 21275632
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  21275750 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 21275651  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  21275650 tcatgtttcgcaatccttg 21275632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 3771847 - 3771899
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatcctt 218  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||||||||    
T  3771847 aaactttatgtgtctcaaggtttgctagactattctcatgtttcgcaatcctt 3771899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 39043064 - 39043199
Alignment:
Q  85 tcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaa 183  Q
    ||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||||| | |||| ||     
T  39043064 tcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattactattagaatccttgaagttcgaaactttgtatgtcccag 39043163  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| |||||  |||||||||    
T  39043164 ggtttgctagactattttcatgtttcacaatccttg 39043199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 24124823 - 24124941
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || ||||||   ||||  |||| || |||||  ||||| ||| ||||||||| ||  |||||||||||    
T  24124823 agtgtgttcctctagcaaccacgcctattttcatggttgatcactattagaatccttgaagttcgaaactctatatgtctcaagattcactagactattt 24124922  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||||||||||||    
T  24124923 tcatgttttgcaatccttg 24124941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 20724441 - 20724554
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||| ||| || |||||||||||| || |||||||| |||||||||| || |||||  |||||||||||||||||||||||||||||||||||    
T  20724441 agtgtgtttctttagcaaccacgtctattttcatggttgattgctattgaaatccttgaagttcgaaactttattgtctcaaggtttgctagactatttt 20724540  T
Q  202 cttgttttgcaatc 215  Q
    | ||||| ||||||    
T  20724541 catgtttcgcaatc 20724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 20169047 - 20169183
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||| ||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||| ||||||||| |||||||    
T  20169047 ctcctttcggtctcagtgagtgggttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagtttgaaactttatatgtctca 20169146  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    || ||||||||||||||||| |||||  |||||||||    
T  20169147 agctttgctagactattttcatgtttcacaatccttg 20169183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 21390185 - 21390049
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| || ||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||| |||| |||||||    
T  21390185 ctcctttcggtctcagtgagtgtgttcctttagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaacattatatgtctca 21390086  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  21390085 aggtttgctagactattttcatgtttcgcaatccttg 21390049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 21382775 - 21382657
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| |  |||||||||||||  |||| || |||||| ||||||||| |||||||| |||| ||| |||||||    
T  21382775 agtgtgttcctctagcaaccacgcctattttcaaggttgattgttattagaatccttgaagtttgaaactttatatgtctcaaagttttctatactattt 21382676  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  21382675 tcatgtttcgcaatccttg 21382657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 24166726 - 24166641
Alignment:
Q  134 atagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||| |||||||| | || ||||  |||||||||||||||||||||||| |||| |||| || ||||| ||||||||||    
T  24166726 atagttgattgctattgaaaccctttaagtacaaaactttattgtctcaaggtttgttagattattctcatgtttcgcaatccttg 24166641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 23029228 - 23029278
Alignment:
Q  169 actttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||    
T  23029228 actttattgtctcaaggtttgctagactattctcatgtttcgcaatccttg 23029278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 12411042 - 12410906
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| ||||||   |||||||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    |||||||||| |||| |    
T  12411042 ctcctttcggtttcagcgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattggaatccttgaagaacgaaactttatttgtctta 12410943  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    | ||||||||||||||| || ||||||||||||||||    
T  12410942 aagtttgctagactattctcatgttttgcaatccttg 12410906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 215
Target Start/End: Complemental strand, 19890253 - 19890125
Alignment:
Q  88 tttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggt 186  Q
    |||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    |||||||||| ||||||||||    
T  19890253 tttcggtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattggaatccttgaagaacgaaactttatttgtctcaaggt 19890154  T
Q  187 ttgctagactattttcttgttttgcaatc 215  Q
    ||||||||||||| || ||||| ||||||    
T  19890153 ttgctagactattctcatgtttcgcaatc 19890125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 21833442 - 21833306
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| ||||||  | |||| ||||||| || |||||||| ||||  |||  || |||||  ||||||||| ||||  |    
T  21833442 ctcctttcggtctcagtgagtgtgttcctctagccaccacgcctattttcatggttgattgctattagaattcttgaagttcgaaactttatatgtccta 21833343  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  21833342 aggtttgctagactattttcatgtttcgcaatccttg 21833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 22171302 - 22171166
Alignment:
Q  83 cctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctca 182  Q
    ||||||||| |||||| | |||||||| |||||| || |||| |||||    | |||||||| ||||| |||| || |||    ||||||||||||||||    
T  22171302 cctcctttcggtttcagtgagtgtgttcctctagcaaccacgcctattcccgtggttgattgctattggaatccttgaagaacgaaactttattgtctca 22171203  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| |||||| |  ||||| ||||||||||    
T  22171202 aggtttgctaaactattcttatgtttcgcaatccttg 22171166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 16677593 - 16677462
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| | |||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||    |||||||||||||||||    
T  16677593 ctcctttcggcttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattagaatccttgaagaacgaaactttattgtctcaa 16677494  T
Q  184 ggtttgctagactattttcttgttttgcaatc 215  Q
     ||||| ||||||||| || ||||||||||||    
T  16677493 agtttgatagactattctcatgttttgcaatc 16677462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 24165769 - 24165633
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||  |||| || |||  | ||||||||| |||||||    
T  24165769 ctcctttcggtctcactgagtgtgttactctagcaaccacgcctattctcatggttgattgctattagaatccttgaagaatgaaactttatatgtctca 24165670  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||| |||||||||| || ||||| |||| |||||    
T  24165669 aggtttactagactattctcatgtttcgcaacccttg 24165633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 219
Target Start/End: Complemental strand, 31414993 - 31414861
Alignment:
Q  88 tttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggt 186  Q
    |||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| ||| | |||| || |||    |||||||||| ||| ||||||    
T  31414993 tttcggtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctatgggaatccttgaagaacgaaactttatttgtcccaaggt 31414894  T
Q  187 ttgctagactattttcttgttttgcaatccttg 219  Q
    ||||| ||||||| || ||||||||||||||||    
T  31414893 ttgctggactattctcatgttttgcaatccttg 31414861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 20738775 - 20738724
Alignment:
Q  167 aaactttatt-gtctcaaggtttgctagactattttcttgttttgcaatcct 217  Q
    |||||||||| ||||||||||||||||||||||| || ||||| ||||||||    
T  20738775 aaactttatttgtctcaaggtttgctagactattctcatgtttcgcaatcct 20738724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 34222788 - 34222841
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||| |||||    
T  34222788 aaactttatatgtctcaaggtttgctagactattctcatgtttcgcaacccttg 34222841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 218
Target Start/End: Original strand, 29576940 - 29577056
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||||||||||||||||||||    
T  29576940 agtgtgtttctctagcaaccacgactattttcatggttgattgctattgaaatccttcaagctcgaaactttattgtctcaaggtttgctagactatttt 29577039  T
Q  202 cttgttttgcaatcctt 218  Q
      |||||||||||||||    
T  29577040 aatgttttgcaatcctt 29577056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 20980 - 21115
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  |||||||||||||||||    
T  20980 ctcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaa 21079  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||| |||||||||||||| ||||| ||||||||||    
T  21080 ggttcgctagactattttcatgtttcgcaatccttg 21115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 21344109 - 21344244
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || ||||||||||||||||||| || ||| |  |||||||||||||||||    
T  21344109 ctcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgttattgaaatccttgaagctcgaaactttattgtctcaa 21344208  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||| |||||||||||||| ||||| ||||| ||||    
T  21344209 ggttcgctagactattttcatgtttcgcaatgcttg 21344244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 24609663 - 24609775
Alignment:
Q  103 gtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttc 202  Q
    |||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  ||||||||||||||||||||||||||||||||||||    
T  24609663 gtgtgtttctctagaaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactattttc 24609762  T
Q  203 ttgttttgcaatc 215  Q
     ||||| ||||||    
T  24609763 atgtttcgcaatc 24609775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 24322310 - 24322175
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||| ||||| || ||||   |||||||||| ||||||    
T  24322310 ctcctttcagtctcaatgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattaaaatccttgaagtacgaaactttattatctcaa 24322211  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| ||||||||||    
T  24322210 ggtttgctagactattttcatgtttcgcaatccttg 24322175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 23341079 - 23340944
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| ||||||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||    
T  23341079 ctcctttcggtctcagtgagtgtgttcctctagaaatcacg-ctattttcatggttgattgatattagaatccttgaagttcgaaactttatatgtctca 23340981  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23340980 aggtttgctagactattttcatgtttcgcaatccttg 23340944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 539711 - 539575
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | || ||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || ||||| |||||||||| |||||||    
T  539711 ctcctttcggtctcagtgagcgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcaaaactttatatgtctca 539612  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||| ||||    
T  539611 aggtttgctagactattttcatgtttcgcaattcttg 539575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 19012584 - 19012719
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||| | | ||||| ||||||||| ||||||| ||||| | || |||||||  |||||||||| || ||  |  |||||||||||||||||    
T  19012584 ctcctttcggttttagtgagtgtatttctctagcaatcacgcctattctcatggttgattaatattgaaatccttgaacctcgaaactttattgtctcaa 19012683  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| || |||||  |||||||||    
T  19012684 ggtttgctagactattctcatgtttcacaatccttg 19012719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 24177269 - 24177404
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||| |||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||||||||||||||||    
T  24177269 ctcctttcggtctcagtgagtttgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttattgtctcaa 24177368  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| | ||| || |||||||    
T  24177369 ggtttgctagactattttcatatttcgctatccttg 24177404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 20852598 - 20852505
Alignment:
Q  126 ctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||| || |||||||| |||| ||||| || ||| |  |||||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  20852598 ctattttcatggttgattgctatttaaatccttgaagctcgaaactttattgtctcaaggtttgctagactattttcatgtttcacaatccttg 20852505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 29563689 - 29563572
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||| | || |||||||||||||  |||| || |||||  ||||||||| |||| |||||||||||||||||||     
T  29563689 agtgtgttcctctagcaaccacgcctattctcatggttgattgttattagaatcattgaagttcgaaactttatatgtcccaaggtttgctagactattc 29563590  T
Q  201 tcttgttttgcaatcctt 218  Q
    || ||||| |||||||||    
T  29563589 tcatgtttcgcaatcctt 29563572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 201
Target Start/End: Complemental strand, 23704794 - 23704675
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagtt-gattgttattgaaatctttaaagtttaaaactttat-tgtctc 181  Q
    |||||||| || ||| | |||||||| |||||| ||||||| |||||||  | ||| ||||| |||   |||| || |||||||||||||||| ||||||    
T  23704794 ctcctttcggtctcagtgagtgtgttcctctagcaatcacgcctattttgctggtttgattgctataagaatccttgaagtttaaaactttatatgtctc 23704695  T
Q  182 aaggtttgctagactatttt 201  Q
    ||||||||||||||||||||    
T  23704694 aaggtttgctagactatttt 23704675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20636159 - 20636041
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||| ||||| ||| ||||||||||||  |||||||||||    
T  20636159 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagtttgaaactctatatgtctcaaggttcactagactattt 20636060  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  20636059 tcatgtttcgcaatccttg 20636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 24371098 - 24371150
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||| ||| || ||||| ||||||||||    
T  24371098 aaactttattgtctcaaggtttgctagacaattctcatgtttcgcaatccttg 24371150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 23613734 - 23613852
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||  ||||||| || |||||||| ||||  |||| || |||||   |||||||| | |||||||||||||||||||||||    
T  23613734 agtgtgttcctctagcaaccacacctattttcatggttgattgctattagaatccttgaagttcgtaactttatatttctcaaggtttgctagactattt 23613833  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  23613834 tcatgtttctcaatccttg 23613852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 24172491 - 24172373
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  24172491 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 24172392  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  24172391 tcatgtttcgcaatccttg 24172373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 23256655 - 23256728
Alignment:
Q  146 tattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| || ||| |  ||||| |||||||||||||||||| |||||||| || ||||| ||||||||||    
T  23256655 tattgaaatccttgaagctcgaaactctattgtctcaaggtttgcaagactattctcatgtttcgcaatccttg 23256728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 25858244 - 25858297
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||    
T  25858244 aaactttatgtgtctcaagatttgctagactattctcatgttttgcaatccttg 25858297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 24365985 - 24366028
Alignment:
Q  176 tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||||||| || ||||| ||||||||||    
T  24365985 tgtctcaaggtttgctagactattctcatgtttcgcaatccttg 24366028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 44998760 - 44998635
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||| | || ||||| |||| | || |||||||| ||||  |||| || |||   |||||||||| |||||||    
T  44998760 ctcctttcggtctcagtgagtgtgttcctctggcaaccacgtttattctcatggttgattgctattagaatccttgaagaacaaaactttatatgtctca 44998661  T
Q  183 aggtttgctagactattttcttgttt 208  Q
    ||||||||||||||||| || |||||    
T  44998660 aggtttgctagactattctcatgttt 44998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 40846991 - 40846856
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  ||||||||||||| |||    
T  40846991 ctcctttcggtctcagtgagtgtgtttctctagaaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtcccaa 40846892  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
     |||||||||||||||||| ||||||||||||||||    
T  40846891 tgtttgctagactattttcatgttttgcaatccttg 40846856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 20224804 - 20224922
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| ||||||| ||||||| || |||||||| |||||||||| || ||| | ||||||||||| ||||||    
T  20224804 ctcctttcggtctcagtgagtgtgtttctctagcaatcacgcctattttcatggttgattgctattgaaatccttgaagctcaaaactttattatctcaa 20224903  T
Q  184 ggtttgctagactattttc 202  Q
    |||||||||||||||||||    
T  20224904 ggtttgctagactattttc 20224922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 11827006 - 11827121
Alignment:
Q  104 tgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttct 203  Q
    ||||||||||||| || |||| || |||| || |||||||| |||||||||| || ||| |  ||||||||||||||||||||||||||||||||||||     
T  11827006 tgtgtttctctagcaaccacgcctgttttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgctagactattttca 11827105  T
Q  204 tgttttgcaatccttg 219  Q
    ||||| ||||||||||    
T  11827106 tgtttcgcaatccttg 11827121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 17023754 - 17023619
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| || ||| | ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  |||||||| ||||||||    
T  17023754 ctcctttcggtctcagtgagtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttagtgtctcaa 17023655  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||| |||||||||||| ||||| ||||||||||    
T  17023654 ggtttgttagactattttcatgtttcgcaatccttg 17023619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 8532388 - 8532271
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||| ||||||| || |||||||  | || ||||| || ||| |  |||||||||||||||||||||||||||||||||||    
T  8532388 agtgtgtttctctagcaaccacgcctattttcatggttgattcctgttaaaatccttgaagctcgaaactttattgtctcaaggtttgctagactatttt 8532289  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||||||||||||||    
T  8532288 catgttttgcaatccttg 8532271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 17775299 - 17775164
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | ||||||||||| ||| || |||| ||||| | || |||||||| |||||||||| || |||  |||||||||||||||||||    
T  17775299 ctcctttcggtttcagtgagtgtgtttctttagcaaccacgcctattctcatggttgattgctattgaaatccttgaagcataaaactttattgtctcaa 17775200  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||| ||| || ||||| ||||| ||||    
T  17775199 ggtttgctagacaattctcatgtttcgcaattcttg 17775164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 19076600 - 19076465
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | ||||||||||| ||| || |||| ||||| | || |||||||| |||||||||| || |||  |||||||||||||||||||    
T  19076600 ctcctttcggtttcagtgagtgtgtttctttagcaaccacgcctattctcatggttgattgctattgaaatccttgaagcataaaactttattgtctcaa 19076501  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||| ||| || ||||| ||||| ||||    
T  19076500 ggtttgctagacaattctcatgtttcgcaattcttg 19076465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 13605556 - 13605419
Alignment:
Q  83 cctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctc 181  Q
    ||||||||| || ||| | |||||||| |||||| || |||||||||||| || |||||||| ||||  |||| || |||||  ||||||||| ||||||    
T  13605556 cctcctttcggtctcagtgagtgtgttcctctagcaaccacgtctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctc 13605457  T
Q  182 aaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||| ||||| ||||| ||||||||||    
T  13605456 aaggtttgctagactcttttcatgtttcgcaatccttg 13605419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 3212973 - 3212837
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| ||||||||  ||||||||| |||| ||    
T  3212973 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttaaagttcgaaactttatatgtccca 3212874  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  3212873 aggtttgctagactattttcatgtttcgcaatccttg 3212837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 11399396 - 11399260
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||||||||| ||| ||    
T  11399396 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatttgtccca 11399297  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  11399296 aggtttgctagactattttcatgtttcgcaatccttg 11399260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 25055534 - 25055398
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||  ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||    
T  25055534 ctcctttcggtctcaatgagtgtgttcctctagcaaccacacctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctca 25055435  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  25055434 aggtttgctagactattttcatgtttcgcaatccttg 25055398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 36079580 - 36079444
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||  ||||||| ||||||| || ||| ||||||||   |||| || |||||  ||||||||| |||||||    
T  36079580 ctcctttcggtctcagtgagtgtgttcctctaacaatcacgcctattttcatggttaattgttatcagaatccttgaagttcgaaactttatatgtctca 36079481  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  36079480 aggtttgctagactattttcatgtttcgcaatccttg 36079444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 13070288 - 13070153
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    |||||||||||||||||    
T  13070288 ctcctttcggtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattggaatccttgaagaacgaaactttattgtctcaa 13070189  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||| | || ||||| ||||||||||    
T  13070188 ggtttgctagactactctcatgtttcgcaatccttg 13070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 3280333 - 3280215
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  || | || ||||| |||||||||| |||||||||||||||||||||||||    
T  3280333 agtgtgttcctctagcaaccacgcctattttcatggttgattactattagaaaccttgaagttcaaaactttatatgtctcaaggtttgctagactattt 3280234  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  3280233 tcatgtttcgcaatccttg 3280215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 27407710 - 27407593
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||  ||||||| || |||||||| |||||||||| || ||| |   ||||||||||||||||| ||||||||||  ||||    
T  27407710 agtgtgtttctctagcaaccacacctattttcatggttgattgctattgaaatccttgaagctcgtaactttattgtctcaagatttgctagaccttttt 27407611  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||| ||||||||||    
T  27407610 catgtttcgcaatccttg 27407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 19566587 - 19566705
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||| |||||||| ||||| |||||    
T  19566587 agtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtcccaaggtttactagattattt 19566686  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||||||||||||    
T  19566687 tcatgttttgcaatccttg 19566705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 14347674 - 14347790
Alignment:
Q  104 tgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattttc 202  Q
    |||||| |||||| || ||||  |||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||||||||||||||||||||||    
T  14347674 tgtgttcctctagcaaccacgcttattttcatggttgattgctattagaatccttgaagttagaaactttatatgtctcaaggtttgctagactattttc 14347773  T
Q  203 ttgttttgcaatccttg 219  Q
     |||||  |||||||||    
T  14347774 atgtttcacaatccttg 14347790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 13418888 - 13418774
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||| |||| |||||||| ||||  |||| || |||    |||||||||| |||||||||||||||||||||||     
T  13418888 agtgtgttcctctagcaaccacgcctattcttatggttgattgctattagaatccttgaagaacgaaactttatttgtctcaaggtttgctagactattc 13418789  T
Q  201 tcttgttttgcaatc 215  Q
    || ||||||||||||    
T  13418788 tcatgttttgcaatc 13418774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 11577406 - 11577459
Alignment:
Q  167 aaactttattgtctcaaggttt-gctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  11577406 aaactttattgtctcaaggttttgctagactattttcatgtttcgcaatccttg 11577459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 14444839 - 14444957
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  14444839 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 14444938  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  14444939 tcatgtttcgcaatccttg 14444957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 14456886 - 14457004
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  14456886 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 14456985  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  14456986 tcatgtttcgcaatccttg 14457004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 17210082 - 17209964
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||||||||| | || |||||||| ||||  |||| || |||    ||||||||  ||||||||||||||||||||||||     
T  17210082 agtgtgttcctctagaaaccacgtctattctaatggttgattgctattagaatccttgaagaacgaaactttacatgtctcaaggtttgctagactattc 17209983  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||||||| |||||    
T  17209982 tcatgttttgcaacccttg 17209964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 20151004 - 20150886
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  ||||||| |||||  ||||| |||  |||||||||||  |||||||||||    
T  20151004 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatctttgaagttcgaaactctataagtctcaaggttcactagactattt 20150905  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  20150904 tcatgtttcgcaatccttg 20150886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 8685502 - 8685554
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||| ||||||||||||||||||||||||||| || |||||  |||||||||    
T  8685502 aaactatattgtctcaaggtttgctagactattctcatgtttcacaatccttg 8685554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 219
Target Start/End: Complemental strand, 17051237 - 17051113
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| |||||||| |||||| || |||  ||||| | || |||||||| |||| ||||| || |||    ||||||||| |||||||||||||||||||    
T  17051237 tcattgagtgtgttcctctagcaaccacacctattctcatggttgattgctattaaaatccttgaagaacgaaactttatatgtctcaaggtttgctaga 17051138  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || ||||| |||| |||||    
T  17051137 ctattctcatgtttcgcaacccttg 17051113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 14137343 - 14137462
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggttt-gctagactatt 199  Q
    |||||||| |||||| || |||| ||||||| || ||||| || ||||  | || || || || |||||||||| |||| |||||||| |||||||||||    
T  14137343 agtgtgttcctctagcaaccacgcctattttcatggttgactgctattagagtcgttgaaattcaaaactttatatgtcccaaggttttgctagactatt 14137442  T
Q  200 ttcttgttttgcaatccttg 219  Q
    ||| ||||| ||||||||||    
T  14137443 ttcatgtttcgcaatccttg 14137462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 19655690 - 19655808
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| |||  |||||||||||  |||||||||||    
T  19655690 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatgagtctcaaggttcactagactattt 19655789  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  19655790 tcatgtttcgcaatccttg 19655808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 1993967 - 1993831
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || |||  ||||| | || |||||||| ||||  |||| || |||    ||||||||| |||||||    
T  1993967 ctcctttccgtttcagtgagtgtgttcctctagcaaccacacctattctcatggttgattgctattagaatccttgaagaacgaaactttatatgtctca 1993868  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||  || ||||| |||| |||||    
T  1993867 aggtttgctagactatactcatgtttcgcaacccttg 1993831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 1999126 - 1998990
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || |||  ||||| | || |||||||| ||||  |||| || |||    ||||||||| |||||||    
T  1999126 ctcctttccgtttcagtgagtgtgttcctctagcaaccacacctattctcatggttgattgctattagaatccttgaagaacgaaactttatatgtctca 1999027  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||  || ||||| |||| |||||    
T  1999026 aggtttgctagactatactcatgtttcgcaacccttg 1998990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 27992106 - 27992198
Alignment:
Q  127 tatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||| |||| ||||||||||||||||| | || |||    ||||||||  |||||||||||| |||||||||| || ||||| | ||||||||    
T  27992106 tattcttatggttgattgttattgaaaccctttaagaacgaaactttaaggtctcaaggtttactagactattctcatgtttcgtaatccttg 27992198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 42244209 - 42244257
Alignment:
Q  171 tttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||||||| || ||||||| | ||||||    
T  42244209 tttattgtctcaaggtttgatagactattctcatgttttgtagtccttg 42244257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 22093 - 21976
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||| ||||||| || |||||||| |||||||||| || ||| |  ||||||||||||||||||||||| |||||||||||    
T  22093 agtgtgtttctctagcaaccacgcctattttcatggttgattgctattgaaatccttgaagctcgaaactttattgtctcaaggtttgttagactatttt 21994  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||| ||||||||||    
T  21993 catgtttagcaatccttg 21976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 219
Target Start/End: Original strand, 8401 - 8536
Alignment:
Q  85 tcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaa 183  Q
    ||||||| || ||| | |||||||| |||||| ||||||| ||||||| || |||||||| ||||  |||| || ||||| |||||||||| ||||||||    
T  8401 tcctttcggtctcagtgagtgtgttcctctagcaatcacgcctattttcatggttgattgctattagaatccttgaagttcaaaactttatatgtctcaa 8500  T
Q  184 ggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||| ||||| ||||||||||    
T  8501 ggtttgctagactattttcatgtttcgcaatccttg 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 82201 - 82316
Alignment:
Q  104 tgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttct 203  Q
    ||||| ||||||| || |||| ||||||| ||||||| ||| |||||||||| || ||| |  |||||||||||||||||||||| ||||||||||||||    
T  82201 tgtgtctctctagcaaccacgcctattttcatagttggttgctattgaaatccttgaagctcgaaactttattgtctcaaggttttctagactattttct 82300  T
Q  204 tgttttgcaatccttg 219  Q
    ||||| ||||||||||    
T  82301 tgtttcgcaatccttg 82316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 33371 - 33256
Alignment:
Q  103 gtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttc 202  Q
    |||||||||| ||| || |||| | |||||||| |||||||| |||||||||| || |||||  ||||||||||||||||||||||||||||||||||||    
T  33371 gtgtgtttctgtagcaaccacgcc-atttttatggttgattgctattgaaatccttgaagttagaaactttattgtctcaaggtttgctagactattttc 33273  T
Q  203 ttgttttgcaatccttg 219  Q
     | |||  |||||||||    
T  33272 atttttcacaatccttg 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 38678 - 38563
Alignment:
Q  103 gtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttc 202  Q
    |||||||||| ||| || |||| | |||||||| |||||||| |||||||||| || |||||  ||||||||||||||||||||||||||||||||||||    
T  38678 gtgtgtttctgtagcaaccacgcc-atttttatggttgattgctattgaaatccttgaagttagaaactttattgtctcaaggtttgctagactattttc 38580  T
Q  203 ttgttttgcaatccttg 219  Q
     | |||  |||||||||    
T  38579 atttttcacaatccttg 38563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 521266 - 521135
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaa 183  Q
    |||||||| |||||| | |||||||| |||||| || ||||  |||| | || |||||||||||||| |||| || ||    ||||||||||||||||||    
T  521266 ctcctttcggtttcaatgagtgtgttcctctagcaaccacgcatattctcatggttgattgttattggaatccttgaaaaacaaaactttattgtctcaa 521167  T
Q  184 ggtttgctagactattttcttgttttgcaatc 215  Q
    ||||| |||||||||| || ||||| ||||||    
T  521166 ggtttcctagactattctcatgtttcgcaatc 521135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 159566 - 159448
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || ||||| |||||| ||| ||||||||||||   ||||||||||    
T  159566 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcaaaactctatatgtctcaaggttcaatagactattt 159467  T
Q  201 tcttgttttgcaatccttg 219  Q
    || |||||  |||||||||    
T  159466 tcatgtttcacaatccttg 159448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 14187 - 14323
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| ||||||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||| ||    
T  14187 ctcctttcggtctcagtgagtgtgttcctctagcaatcacgcctattttaatggttgattgctattagaatccttgaagttctaaactttatatgtccca 14286  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  14287 aggtttgctagactattttcatgtttcgcaatccttg 14323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 1278 - 1414
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| ||||| |||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||| ||    
T  1278 ctcctttcggtctcaataagtatgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtcaca 1377  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  1378 aggtttgctagactattttcatgtttcgcaatccttg 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1058 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1058
Description:

Target: scaffold1058; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 2655 - 2791
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| ||||| |||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||| ||    
T  2655 ctcctttcggtctcaataagtatgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtcaca 2754  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  2755 aggtttgctagactattttcatgtttcgcaatccttg 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 43883 - 44019
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  ||||||||| ||||||     
T  43883 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctcc 43982  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  43983 aggtttgctagactattttcatgtttcgcaatccttg 44019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 4472 - 4516
Alignment:
Q  175 ttgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||| || ||||||||||||||||    
T  4472 ttgtctcaaggtttgctagactattctcatgttttgcaatccttg 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 14589 - 14472
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactatttt 201  Q
    ||||||||||||||| || |||| ||||| | || |||||||| |||||||||| || |||     || |||||||||||||||||||||||||||||      
T  14589 agtgtgtttctctagcaaccacgcctattctcatggttgattgctattgaaatccttgaagcacggaaatttattgtctcaaggtttgctagactattca 14490  T
Q  202 cttgttttgcaatccttg 219  Q
    | ||||||||||||||||    
T  14489 catgttttgcaatccttg 14472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 24221180 - 24221261
Alignment:
Q  138 ttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||| | || ||||  |||||||||||||||||||||||||||||||||| || |||||  |||||||||    
T  24221180 ttgattgttattgaaaccctttaagtacaaaactttattgtctcaaggtttgctagactattctcatgtttcacaatccttg 24221261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 6280264 - 6280128
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| | |||| || |||| ||||||| || |||| ||| ||||  |||| || |||||  ||||||||| |||||||    
T  6280264 ctcctttcagtctcagtgagtgtgttcccctagcaaccacgcctattttcatggttggttgctattagaatccttgaagttcgaaactttatatgtctca 6280165  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  6280164 aggtttgctagactattttcatgtttcgcaatccttg 6280128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 26013426 - 26013312
Alignment:
Q  106 tgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattttctt 204  Q
    |||| |||||| || |||||||||||| || |||||||| ||||  |||| || |||||  ||||||||| |||||||||||||||||||| ||||||      
T  26013426 tgttcctctagcaaccacgtctattttcatggttgattgctattagaatccttgaagttcgaaactttatatgtctcaaggtttgctagacaattttcaa 26013327  T
Q  205 gttttgcaatccttg 219  Q
    |||| ||||||||||    
T  26013326 gtttcgcaatccttg 26013312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 21319917 - 21319804
Alignment:
Q  106 tgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttg 205  Q
    ||||||||||| ||||||| ||||||| || |||||||| || ||||||| |  ||| |  |||||||||||||| ||||||| |||||||||| || ||    
T  21319917 tgtttctctagcaatcacgcctattttcatggttgattgctagtgaaatcctagaagctcgaaactttattgtctgaaggttttctagactattgtcatg 21319818  T
Q  206 ttttgcaatccttg 219  Q
    |||  |||||||||    
T  21319817 tttctcaatccttg 21319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 219
Target Start/End: Original strand, 19791811 - 19791936
Alignment:
Q  94 tttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttattgtctcaaggtttgctag 193  Q
    ||||| |||||||||| |||| | || |||||||||| | ||  ||||||| ||||| |||| || |||   |||||||| |||||||||||||||||||    
T  19791811 tttcagtaagtgtgttcctcttgcaaccacgtctattctcatgattgattgctattggaatccttgaagaagaaaacttttttgtctcaaggtttgctag 19791910  T
Q  194 actattttcttgttttgcaatccttg 219  Q
    || ||| || |||||  |||||||||    
T  19791911 accattctcatgtttcacaatccttg 19791936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 23193530 - 23193648
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctcaaggtttgctagactattt 200  Q
    ||||||||||||||| || |||| ||||| |  | |||||||| ||||  |||| || |||    |||||||||| |||||||||||||||||||||||     
T  23193530 agtgtgtttctctagcaaccacgcctattctcttggttgattgctatttgaatccttgaagaacgaaactttatttgtctcaaggtttgctagactattc 23193629  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  23193630 tcatgtttcgcaatccttg 23193648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 18008575 - 18008502
Alignment:
Q  146 tattgaaatctttaaagtttaaaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||| || ||| |  |||||||||||||| ||||||||||||| ||||||| |||||  |||||||||    
T  18008575 tattgaaatccttgaagctcgaaactttattgtcttaaggtttgctagaatattttcatgtttcacaatccttg 18008502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 24967688 - 24967635
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||| |||||    
T  24967688 aaactttatatgtctcaaggtttgctagactattctcatgttttgcaacccttg 24967635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 22905027 - 22904987
Alignment:
Q  168 aactttattgtctcaaggtttgctagactattttcttgttt 208  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  22905027 aactttattgtctcaaggtttgctagactattctcatgttt 22904987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 26854587 - 26854451
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || |||| ||||| | || |||||||| | ||  |||| || ||   | |||||||||| ||||||    
T  26854587 ctcctttcggtttcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctttttgaatccttgaataattaaactttatttgtctca 26854488  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || |||||  |||||||||    
T  26854487 aggtttgctagactattctcatgtttcacaatccttg 26854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 14821684 - 14821566
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||  ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  14821684 agtgtgttcctctagcaagcacacctattttcatggttgattactattagaatccttgaagttctaaactctatgtgtctcaaggttcactagactattt 14821585  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  14821584 tcatgtttcgcaatccttg 14821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 21140165 - 21140047
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || ||||  |||| | || |||||||||||||  |||| || |||    ||||||||| ||||||||||||||||||||||||     
T  21140165 agtgtgttcctctagaaaccacgcttattctcatggttgattgttattagaatccttgaagaaagaaactttatatgtctcaaggtttgctagactattc 21140066  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| |||| |||||    
T  21140065 tcatgtttcgcaacccttg 21140047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 1990145 - 1990198
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| |||| |||||    
T  1990145 aaactttatatgtctcaaggtttgctagactattctcatgtttcgcaacccttg 1990198  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 29004067 - 29004014
Alignment:
Q  166 aaaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatcctt 218  Q
    |||||||||| |||||||||||||||||||||||| || ||||| |||| ||||    
T  29004067 aaaactttatatgtctcaaggtttgctagactattctcatgtttcgcaaccctt 29004014  T

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Target: scaffold0278 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 12115 - 12251
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||| |||| |||| ||    
T  12115 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgattgctattagaatcctttaagttcgaaacattatatgtccca 12214  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  12215 aggtttgctagactattttcatgtttcgcaatccttg 12251  T

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Target: scaffold0713 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 219
Target Start/End: Original strand, 6290 - 6414
Alignment:
Q  96 tcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctaga 194  Q
    ||||| ||| ||||||||||| || |||| ||||| | || |||||||||||||  |||| || |||   |||||||||| |||||||||||||||||||    
T  6290 tcattgagtttgtttctctagcaaccacgcctattctcatggttgattgttattagaatccttgaagaacaaaactttatgtgtctcaaggtttgctaga 6389  T
Q  195 ctattttcttgttttgcaatccttg 219  Q
    ||||| || | ||| ||||||||||    
T  6390 ctattctcatatttcgcaatccttg 6414  T

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Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 173257 - 173121
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| |||||| | |||||||| |||||| || ||||  |||||| || |||||||| ||||| |||| || |||    |||||||||| |||| |    
T  173257 ctcctttcggtttcagtgagtgtgttcctctagcaaccacgcttattttcatggttgattgctattggaatccttgaagaacgaaactttatttgtctta 173158  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||| || | ||||||||||||||    
T  173157 aggtttgctagactattctcatattttgcaatccttg 173121  T

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Target: scaffold0674 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 1380 - 1498
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||| ||||| ||| ||||||||||||  |||||||||||    
T  1380 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagtttgaaactctatatgtctcaaggttcactagactattt 1479  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  1480 tcatgtttcgcaatccttg 1498  T

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Target: scaffold0855 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 3899 - 3847
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||||||| || |||||  |||||||||    
T  3899 aaactttattgtctcaaggtttgctagactattctcatgtttcacaatccttg 3847  T

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Target: scaffold0847 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 4064 - 4012
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||||||||||||||||||||||| || |||||  |||||||||    
T  4064 aaactttattgtctcaaggtttgctagactattctcatgtttcacaatccttg 4012  T

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Target: scaffold0773 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 1632 - 1496
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||||| || |||||||| ||||  |||| || |||||  |||| |||| ||| |||    
T  1632 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattttaatggttgattgctattagaatccttgaagttcgaaacattatatgtatca 1533  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||| |||||||| | ||| ||||||||||    
T  1532 aggtttgctaggctattttcatatttcgcaatccttg 1496  T

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Target: scaffold0058 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 219
Target Start/End: Complemental strand, 62289 - 62171
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| ||| ||||||||||||  |||||||||||    
T  62289 agtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctatatgtctcaaggttcactagactattt 62190  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||| ||||||||||    
T  62189 tcatgtttcgcaatccttg 62171  T

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Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22079 - 22132
Alignment:
Q  167 aaactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||| |||||||||||||||||||||||| || ||||| ||||||||||    
T  22079 aaactttatgtgtctcaaggtttgctagactattctcatgtttcgcaatccttg 22132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 21240 - 21376
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    ||||| || |||||| | |||||||| |||||| || |||| ||||||| || |||||||  ||||  |||| || |||||  ||||| |||  ||||||    
T  21240 ctcctatcggtttcagtgagtgtgttcctctagcaagcacgcctattttcatggttgattactattagaatccttgaagttcgaaactctataagtctca 21339  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||  ||||||||||||| ||||| ||||||||||    
T  21340 aggttcactagactattttcatgtttcgcaatccttg 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22394 - 22446
Alignment:
Q  167 aaactttattgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||||||||||||||||||| |||| || ||||| || |||||||    
T  22394 aaactttattgtctcaaggtttgctagattattctcatgtttcgctatccttg 22446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 53809 - 53945
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttatt-gtctca 182  Q
    |||||||| || ||| | |||||||| |||||| || |||| ||||| | || |||||||| ||||| |||| || |||    ||| |||||| ||||||    
T  53809 ctcctttcggtctcagtgagtgtgttcctctagcaaccacgcctattctcatggttgattgctattggaatccttgaagaacgaaaatttatttgtctca 53908  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||| ||| || ||||| ||||||||||    
T  53909 aggtttgctagaccattctcatgtttcgcaatccttg 53945  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 83908 - 83951
Alignment:
Q  176 tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||    
T  83908 tgtctcaaggtttactagactattttcatgtttcgcaatccttg 83951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 48821 - 48779
Alignment:
Q  177 gtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  48821 gtctcaaggttcactagactattttcatgttttgcaatccttg 48779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 219
Target Start/End: Original strand, 9411 - 9529
Alignment:
Q  102 agtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctcaaggtttgctagactattt 200  Q
    |||||||| |||||| || |||| ||||||| || ||||||   ||||  |||| || |||||  ||||| ||| ||||||||| ||  |||||||||||    
T  9411 agtgtgttcctctagcaaccacgcctattttcatggttgatcactattagaatccttgaagttcgaaactctatatgtctcaagattcactagactattt 9510  T
Q  201 tcttgttttgcaatccttg 219  Q
    || ||||||||||||||||    
T  9511 tcatgttttgcaatccttg 9529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 19786 - 19744
Alignment:
Q  177 gtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  19786 gtctcaaggttcactagactattttcatgttttgcaatccttg 19744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 26615 - 26573
Alignment:
Q  177 gtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  26615 gtctcaaggttcactagactattttcatgttttgcaatccttg 26573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 8878 - 8930
Alignment:
Q  168 aactttat-tgtctcaaggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||||| |||||||||||| ||||||||||| || || |||||||||||||    
T  8878 aactttatgtgtctcaaggttggctagactattctcatgctttgcaatccttg 8930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 100925 - 100789
Alignment:
Q  84 ctcctttctgtttcattaagtgtgtttctctagtaatcacgtctatttttatagttgattgttattgaaatctttaaagtttaaaactttat-tgtctca 182  Q
    ||||| ||||| ||| | |||||||| |||||| || |||| ||||||| || ||||||   ||||  |||| || ||||| |||||| ||| |||||||    
T  100925 ctcctatctgtctcagtgagtgtgttcctctagcaaccacgcctattttcatggttgataactattagaatccttgaagttcaaaactctatatgtctca 100826  T
Q  183 aggtttgctagactattttcttgttttgcaatccttg 219  Q
    |||||   || ||||||||| ||||| ||||||||||    
T  100825 aggttcagtatactattttcatgtttcgcaatccttg 100789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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