View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1532_low_119 (Length: 223)
Name: NF1532_low_119
Description: NF1532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1532_low_119 |
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Alignment Details
Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 44489096 - 44488947
Alignment:
| Q |
1 |
aacatttggtaagaaaacaatttttatttcattttcagaaactata----catcttttggttaggtctaattcaatccttacaaaatcagcttttacaat |
96 |
Q |
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| T |
44489096 |
aacatttggtaagaaaacaatttttatttcattttcagaaactatatatacatcttttggttaggtctaattcaatccttacaaaatcagcttttacaat |
44488997 |
T |
|
| Q |
97 |
gaagatatattgtcttcatttataaacacattttcagactatatattattggac |
150 |
Q |
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|||| |||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
44488996 |
gaag----attgtcttcatttataaacacattttcagactatatcttattggac |
44488947 |
T |
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