View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1532_low_22 (Length: 493)

Name: NF1532_low_22
Description: NF1532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1532_low_22
NF1532_low_22
[»] chr4 (59 HSPs)
chr4 (278-490)||(5664388-5664600)
chr4 (63-261)||(1771170-1771368)
chr4 (64-259)||(27550309-27550504)
chr4 (65-261)||(28982728-28982924)
chr4 (67-261)||(33703139-33703333)
chr4 (66-262)||(23035977-23036173)
chr4 (67-259)||(35017733-35017924)
chr4 (67-261)||(25051691-25051885)
chr4 (55-270)||(55966242-55966457)
chr4 (67-257)||(43514594-43514784)
chr4 (67-257)||(27893750-27893940)
chr4 (67-256)||(23204686-23204875)
chr4 (65-262)||(27864561-27864758)
chr4 (67-257)||(43949709-43949900)
chr4 (66-259)||(27316619-27316813)
chr4 (64-257)||(43735744-43735937)
chr4 (67-259)||(12496956-12497148)
chr4 (66-257)||(31680904-31681095)
chr4 (88-257)||(39631102-39631272)
chr4 (62-262)||(28988470-28988669)
chr4 (67-217)||(51512173-51512323)
chr4 (73-260)||(48463364-48463551)
chr4 (65-260)||(21687005-21687200)
chr4 (73-259)||(41847971-41848157)
chr4 (73-259)||(45490227-45490413)
chr4 (98-258)||(41878407-41878567)
chr4 (94-257)||(41327478-41327641)
chr4 (66-205)||(56215805-56215943)
chr4 (160-259)||(17619153-17619252)
chr4 (107-206)||(46412417-46412516)
chr4 (160-261)||(711958-712059)
chr4 (160-259)||(55272377-55272476)
chr4 (177-257)||(3756264-3756344)
chr4 (160-260)||(32728356-32728456)
chr4 (160-260)||(48435580-48435680)
chr4 (171-262)||(35037002-35037093)
chr4 (179-261)||(960890-960972)
chr4 (66-139)||(19880074-19880147)
chr4 (67-139)||(55272284-55272356)
chr4 (63-139)||(35037125-35037200)
chr4 (89-139)||(712080-712130)
chr4 (65-139)||(17619058-17619132)
chr4 (160-226)||(19879987-19880053)
chr4 (57-139)||(46827604-46827686)
chr4 (66-139)||(3756159-3756232)
chr4 (177-262)||(46827724-46827809)
chr4 (179-260)||(49229684-49229765)
chr4 (67-139)||(48435487-48435559)
chr4 (93-136)||(50526201-50526245)
chr4 (93-148)||(55475217-55475273)
chr4 (93-155)||(17983754-17983817)
chr4 (93-155)||(29977911-29977974)
chr4 (93-155)||(48183060-48183123)
chr4 (93-155)||(50052439-50052502)
chr4 (29-67)||(5664350-5664388)
chr4 (460-490)||(38890193-38890223)
chr4 (91-139)||(960802-960850)
chr4 (96-155)||(29589751-29589811)
chr4 (64-124)||(32728492-32728552)
[»] chr1 (48 HSPs)
chr1 (63-260)||(750209-750406)
chr1 (67-262)||(5489773-5489968)
chr1 (67-259)||(43570994-43571186)
chr1 (62-261)||(48498865-48499064)
chr1 (62-257)||(7447828-7448022)
chr1 (65-262)||(24769405-24769602)
chr1 (66-259)||(50448167-50448360)
chr1 (66-257)||(4401329-4401521)
chr1 (67-262)||(23989431-23989627)
chr1 (68-259)||(37814778-37814969)
chr1 (66-257)||(2497469-2497660)
chr1 (66-217)||(4888085-4888235)
chr1 (160-259)||(48119628-48119727)
chr1 (160-261)||(44112675-44112776)
chr1 (160-259)||(35003294-35003393)
chr1 (160-259)||(38335918-38336017)
chr1 (160-260)||(41065152-41065252)
chr1 (160-259)||(46168383-46168482)
chr1 (166-260)||(38113202-38113296)
chr1 (160-261)||(45639733-45639834)
chr1 (160-260)||(45427746-45427846)
chr1 (62-139)||(35003414-35003491)
chr1 (93-155)||(32813273-32813336)
chr1 (64-139)||(44112797-44112872)
chr1 (160-260)||(45705824-45705924)
chr1 (67-139)||(45705945-45706017)
chr1 (160-259)||(35000114-35000213)
chr1 (73-139)||(48119748-48119814)
chr1 (97-145)||(26440764-26440813)
chr1 (93-156)||(9474886-9474950)
chr1 (67-139)||(35000021-35000093)
chr1 (63-139)||(38113099-38113175)
chr1 (67-139)||(45639640-45639712)
chr1 (93-155)||(2581941-2582004)
chr1 (202-261)||(14427345-14427404)
chr1 (178-221)||(26585500-26585543)
chr1 (64-139)||(26585582-26585657)
chr1 (94-156)||(41758832-41758895)
chr1 (88-139)||(46168503-46168554)
chr1 (93-155)||(50591011-50591074)
chr1 (93-134)||(3000345-3000387)
chr1 (93-134)||(38595180-38595222)
chr1 (66-136)||(45427652-45427722)
chr1 (93-134)||(51898715-51898757)
chr1 (91-155)||(13414785-13414850)
chr1 (66-139)||(41065271-41065344)
chr1 (93-136)||(37649224-37649268)
chr1 (93-156)||(45044570-45044634)
[»] chr3 (46 HSPs)
chr3 (66-262)||(46941050-46941246)
chr3 (67-261)||(40808863-40809057)
chr3 (58-263)||(54237092-54237297)
chr3 (67-262)||(24688310-24688505)
chr3 (64-258)||(42394324-42394518)
chr3 (64-261)||(47190931-47191127)
chr3 (65-262)||(54246054-54246251)
chr3 (66-260)||(25413680-25413874)
chr3 (64-259)||(36150130-36150325)
chr3 (67-258)||(40480750-40480941)
chr3 (67-257)||(53581766-53581956)
chr3 (67-259)||(42100688-42100880)
chr3 (67-259)||(45126836-45127028)
chr3 (66-217)||(52629870-52630021)
chr3 (65-261)||(53273599-53273786)
chr3 (65-257)||(1078229-1078412)
chr3 (67-257)||(27748565-27748746)
chr3 (64-262)||(11064627-11064823)
chr3 (118-224)||(51249343-51249449)
chr3 (67-262)||(9434121-9434316)
chr3 (160-262)||(4190266-4190368)
chr3 (160-261)||(10457893-10457994)
chr3 (171-260)||(25996267-25996356)
chr3 (157-262)||(29558232-29558337)
chr3 (93-155)||(26141543-26141606)
chr3 (64-157)||(29556864-29556956)
chr3 (160-261)||(52627978-52628079)
chr3 (62-145)||(19148882-19148965)
chr3 (160-259)||(34791829-34791928)
chr3 (63-105)||(40488174-40488216)
chr3 (93-149)||(20764932-20764989)
chr3 (62-139)||(51757713-51757789)
chr3 (91-139)||(4190197-4190245)
chr3 (93-155)||(17470431-17470494)
chr3 (93-155)||(33644226-33644289)
chr3 (68-139)||(34791949-34792019)
chr3 (93-155)||(49607440-49607503)
chr3 (97-155)||(51419371-51419430)
chr3 (93-155)||(53982037-53982100)
chr3 (74-129)||(54429180-54429235)
chr3 (65-139)||(10457798-10457872)
chr3 (93-134)||(11095385-11095427)
chr3 (93-155)||(45058564-45058626)
chr3 (93-134)||(52629326-52629368)
chr3 (97-148)||(11347940-11347992)
chr3 (95-134)||(31456717-31456757)
[»] chr8 (40 HSPs)
chr8 (66-262)||(36743390-36743586)
chr8 (72-259)||(29705362-29705549)
chr8 (66-259)||(11582766-11582959)
chr8 (65-262)||(30660648-30660845)
chr8 (71-259)||(2165875-2166063)
chr8 (68-260)||(42197344-42197536)
chr8 (62-257)||(30912465-30912660)
chr8 (67-260)||(2546995-2547188)
chr8 (66-258)||(45397317-45397508)
chr8 (67-262)||(42295192-42295386)
chr8 (73-257)||(29800864-29801048)
chr8 (63-257)||(20148762-20148956)
chr8 (67-260)||(31384663-31384856)
chr8 (90-262)||(5754900-5755072)
chr8 (68-257)||(26125637-26125825)
chr8 (67-217)||(9241594-9241744)
chr8 (64-259)||(1375542-1375737)
chr8 (67-224)||(3743806-3743963)
chr8 (90-260)||(40528565-40528736)
chr8 (163-257)||(42699259-42699353)
chr8 (160-262)||(35181513-35181615)
chr8 (160-261)||(34304786-34304887)
chr8 (160-260)||(18066719-18066819)
chr8 (166-260)||(16603633-16603727)
chr8 (160-262)||(33629994-33630096)
chr8 (65-139)||(34304908-34304981)
chr8 (67-139)||(10678060-10678132)
chr8 (165-258)||(16358839-16358933)
chr8 (160-217)||(10678153-10678210)
chr8 (90-139)||(35181636-35181685)
chr8 (67-139)||(33629901-33629973)
chr8 (93-155)||(15048193-15048255)
chr8 (93-155)||(15197359-15197422)
chr8 (93-155)||(16383403-16383466)
chr8 (460-490)||(2468098-2468128)
chr8 (93-134)||(5957856-5957898)
chr8 (460-490)||(21482647-21482677)
chr8 (93-134)||(37038505-37038547)
chr8 (91-155)||(16056412-16056477)
chr8 (462-490)||(21480841-21480869)
[»] chr6 (29 HSPs)
chr6 (65-260)||(21279928-21280123)
chr6 (65-260)||(9698239-9698434)
chr6 (63-262)||(26669913-26670112)
chr6 (67-257)||(30735984-30736174)
chr6 (65-262)||(7273241-7273438)
chr6 (67-257)||(24203895-24204085)
chr6 (53-262)||(3213397-3213606)
chr6 (57-262)||(7367546-7367751)
chr6 (73-262)||(7292744-7292933)
chr6 (68-259)||(13743130-13743321)
chr6 (68-259)||(13748630-13748821)
chr6 (65-262)||(26466796-26466993)
chr6 (62-259)||(30014343-30014540)
chr6 (66-260)||(21293584-21293778)
chr6 (160-257)||(27441544-27441641)
chr6 (160-261)||(33242401-33242502)
chr6 (160-259)||(33253913-33254012)
chr6 (182-260)||(31109245-31109323)
chr6 (67-139)||(33242523-33242595)
chr6 (65-139)||(27441662-27441736)
chr6 (93-155)||(22880669-22880732)
chr6 (62-139)||(31109125-31109202)
chr6 (66-139)||(33254034-33254107)
chr6 (93-155)||(4231574-4231637)
chr6 (93-155)||(15508035-15508098)
chr6 (93-155)||(15990053-15990116)
chr6 (93-155)||(30341371-30341434)
chr6 (93-155)||(31976274-31976337)
chr6 (93-155)||(32869704-32869767)
[»] scaffold0119 (1 HSPs)
scaffold0119 (63-262)||(682-881)
[»] chr2 (53 HSPs)
chr2 (65-260)||(30838631-30838826)
chr2 (64-258)||(19047158-19047352)
chr2 (67-259)||(1750414-1750606)
chr2 (66-262)||(4764633-4764829)
chr2 (61-257)||(43490303-43490499)
chr2 (66-262)||(12302160-12302356)
chr2 (67-259)||(16096747-16096940)
chr2 (67-261)||(43335671-43335865)
chr2 (68-217)||(42849768-42849916)
chr2 (64-258)||(34817681-34817875)
chr2 (100-259)||(13780676-13780835)
chr2 (72-260)||(42026766-42026956)
chr2 (66-221)||(39149201-39149354)
chr2 (118-257)||(8896542-8896681)
chr2 (160-262)||(43114554-43114656)
chr2 (180-257)||(33229303-33229381)
chr2 (160-257)||(11825655-11825752)
chr2 (160-261)||(16803966-16804067)
chr2 (160-261)||(16843248-16843349)
chr2 (58-263)||(34895640-34895845)
chr2 (160-257)||(41281975-41282072)
chr2 (160-259)||(12415461-12415560)
chr2 (160-259)||(12427521-12427620)
chr2 (166-260)||(18491704-18491798)
chr2 (160-261)||(966835-966936)
chr2 (93-155)||(40613913-40613976)
chr2 (62-139)||(18491825-18491902)
chr2 (62-139)||(41281877-41281954)
chr2 (63-139)||(6518398-6518474)
chr2 (177-257)||(6518487-6518566)
chr2 (67-139)||(11825562-11825634)
chr2 (67-131)||(12415368-12415432)
chr2 (67-131)||(12427428-12427492)
chr2 (63-139)||(12531567-12531643)
chr2 (160-221)||(4451951-4452012)
chr2 (62-139)||(43114677-43114754)
chr2 (67-139)||(966742-966814)
chr2 (177-257)||(4299438-4299518)
chr2 (94-149)||(38273159-38273215)
chr2 (170-257)||(7070418-7070505)
chr2 (177-260)||(14285675-14285758)
chr2 (94-155)||(7465746-7465808)
chr2 (67-139)||(16804088-16804160)
chr2 (67-139)||(16843370-16843442)
chr2 (93-156)||(17820014-17820078)
chr2 (65-113)||(29739358-29739406)
chr2 (93-155)||(2997498-2997561)
chr2 (93-155)||(28863481-28863544)
chr2 (93-155)||(42257219-42257282)
chr2 (93-134)||(9058506-9058548)
chr2 (90-139)||(4299351-4299400)
chr2 (94-134)||(17473047-17473088)
chr2 (91-134)||(27864728-27864772)
[»] scaffold0038 (1 HSPs)
scaffold0038 (64-258)||(112656-112850)
[»] chr5 (28 HSPs)
chr5 (67-261)||(18033980-18034174)
chr5 (66-259)||(2614556-2614749)
chr5 (61-261)||(33801467-33801667)
chr5 (67-259)||(41334571-41334763)
chr5 (92-259)||(22512305-22512472)
chr5 (65-262)||(7617130-7617327)
chr5 (66-262)||(5256992-5257188)
chr5 (73-261)||(38470577-38470765)
chr5 (65-257)||(25914902-25915085)
chr5 (107-212)||(39122381-39122486)
chr5 (64-172)||(39122261-39122369)
chr5 (187-259)||(33855071-33855143)
chr5 (160-259)||(32473395-32473494)
chr5 (160-260)||(17208073-17208173)
chr5 (160-262)||(30622720-30622821)
chr5 (93-156)||(28177801-28177865)
chr5 (67-139)||(30622627-30622699)
chr5 (68-139)||(32473303-32473374)
chr5 (93-156)||(6679724-6679788)
chr5 (93-155)||(2252179-2252242)
chr5 (93-155)||(3921276-3921339)
chr5 (93-155)||(18520895-18520958)
chr5 (93-155)||(26720542-26720605)
chr5 (93-155)||(26990291-26990354)
chr5 (93-134)||(2740300-2740342)
chr5 (93-134)||(42414334-42414376)
chr5 (110-155)||(15409621-15409666)
chr5 (70-139)||(17208194-17208263)
[»] chr7 (41 HSPs)
chr7 (62-259)||(5810827-5811024)
chr7 (66-259)||(24000919-24001112)
chr7 (67-259)||(42538339-42538531)
chr7 (67-233)||(32029725-32029891)
chr7 (73-262)||(5015392-5015581)
chr7 (63-260)||(35069720-35069917)
chr7 (66-259)||(42972852-42973045)
chr7 (64-257)||(16180262-16180454)
chr7 (66-257)||(44416841-44417032)
chr7 (67-257)||(43343532-43343722)
chr7 (63-257)||(44326180-44326374)
chr7 (67-256)||(26898310-26898499)
chr7 (67-261)||(41861672-41861868)
chr7 (70-243)||(27393171-27393344)
chr7 (88-229)||(38160508-38160649)
chr7 (67-257)||(10573751-10573941)
chr7 (66-257)||(4638106-4638297)
chr7 (65-259)||(45326020-45326214)
chr7 (65-260)||(9216301-9216495)
chr7 (92-260)||(43317442-43317610)
chr7 (92-260)||(5194164-5194332)
chr7 (98-260)||(24280535-24280697)
chr7 (63-175)||(47279628-47279740)
chr7 (160-259)||(31513287-31513386)
chr7 (171-262)||(40236916-40237007)
chr7 (160-258)||(31408634-31408732)
chr7 (66-139)||(40237039-40237112)
chr7 (160-262)||(33384867-33384970)
chr7 (93-155)||(46374813-46374876)
chr7 (160-262)||(27535232-27535334)
chr7 (63-139)||(31408537-31408613)
chr7 (192-259)||(39998408-39998475)
chr7 (93-158)||(32564434-32564500)
chr7 (93-155)||(35522902-35522965)
chr7 (93-155)||(36361924-36361987)
chr7 (89-139)||(27535161-27535211)
chr7 (91-155)||(38267064-38267129)
chr7 (63-139)||(31513407-31513483)
chr7 (63-139)||(33384991-33385067)
chr7 (93-156)||(35137559-35137623)
chr7 (93-136)||(46033831-46033875)
[»] scaffold0187 (2 HSPs)
scaffold0187 (67-260)||(14097-14289)
scaffold0187 (67-260)||(24425-24617)
[»] scaffold0385 (1 HSPs)
scaffold0385 (67-261)||(11249-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (67-259)||(23329-23521)
[»] scaffold0003 (2 HSPs)
scaffold0003 (160-257)||(45720-45817)
scaffold0003 (65-139)||(45625-45699)
[»] scaffold0100 (2 HSPs)
scaffold0100 (160-259)||(35457-35556)
scaffold0100 (72-124)||(35369-35421)
[»] scaffold0468 (1 HSPs)
scaffold0468 (460-489)||(1611-1640)


Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 278 - 490
Target Start/End: Original strand, 5664388 - 5664600
Alignment:
Q  278 ggataaacgccaaaaacatatttgacaccataccacctatgcataataagcaccccaacatcctaatgcatagccaatacaaccagaaggtccttacaag 377  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5664388 ggataaacgccaaaaacatatttgacaccacaccacctatgcataataagcaccccaacatcctaatgcatagccaatacaaccagaaggtccttacaag 5664487  T
Q  378 ttacatcaccagaattccatcatggtgtctattgttgacacagtttgaattagcaccattcaaaaagtatctaattaaactcatttcgtgtgttctctct 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5664488 ttacatcaccagaattccatcatggtgtctattgttgacacagtttgaattagcaccattcaaaaagcatctaattaaactcatttcgtgtgttctctct 5664587  T
Q  478 ttcttttctctcg 490  Q
    |||||||||||||    
T  5664588 ttcttttctctcg 5664600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 1771170 - 1771368
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  1771170 aaaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgagacgtggcaacttggaccccacataaatagaag 1771269  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||| ||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  1771270 ataaaatgtggttgtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcctt 1771368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 64 - 259
Target Start/End: Complemental strand, 27550504 - 27550309
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  27550504 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacataaatagaaga 27550405  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||  ||||||||||||||||||||||||    
T  27550404 taaagtgtggttgtaagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 65 - 261
Target Start/End: Original strand, 28982728 - 28982924
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28982728 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 28982827  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||||| |||| ||||||||| |||||||||||||||||||| ||||| |||||||| |||||||| ||  ||||||||||||||||||||||||||    
T  28982828 aaagtgcggttgtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcctt 28982924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 33703333 - 33703139
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  33703333 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccgcacaaatagaagataa 33703234  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  | ||||| ||  ||||||||||||||||||||||||||    
T  33703233 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcctt 33703139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 66 - 262
Target Start/End: Complemental strand, 23036173 - 23035977
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  23036173 agagtgatgatacatgtaccaccccatgtggcaacacatcctttacacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagata 23036074  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||| |||| ||||||||||||||| || ||||||||||| |||||||||||  ||||  |||||||||||||||||||||    
T  23036073 aagtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttccttt 23035977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 35017924 - 35017733
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35017924 gagtgatgatacatgtaccaccccatgtggcaatacatcttttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataa 35017825  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| | | ||||||  ||||||||||||||||||||||||    
T  35017824 agtgtggttgtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 25051885 - 25051691
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||| ||||||||||| | |||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  25051885 gagtgatgatacatgtaccaccccacgtggcaatacatcatttacatccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataa 25051786  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||||| || ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||| |||||||||||    
T  25051785 agtgtgattgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcctt 25051691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 55966242 - 55966457
Alignment:
Q  55 tattttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacaca 154  Q
    |||||||  |||||||| ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||||| |    
T  55966242 tattttcggaaagagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctgacaggtggcaatctagaccccacata 55966341  T
Q  155 aatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacat 254  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||  ||||||||| |||||||||    
T  55966342 aatagaagataaattgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacat 55966441  T
Q  255 tttcctttcagaaaag 270  Q
    ||||||||| ||||||    
T  55966442 tttcctttcggaaaag 55966457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 43514594 - 43514784
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  43514594 gagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacaaaaaattctgacacgtggcaacctagaccccacacaaatagaagataa 43514693  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
     |||||||| ||||||||| ||||||||||| ||||||||||||  ||||||||||| |||||||||  ||||||||||||||||||||||    
T  43514694 ggtgtggttgtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 27893750 - 27893940
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||||| |||||||||||||    
T  27893750 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataa 27893849  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  || |||||| ||||||||||||    
T  27893850 agtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 256
Target Start/End: Original strand, 23204686 - 23204875
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||| |||||||| ||||||||||| |||||||||||||    
T  23204686 gagtgatgatacacgtaccatcccatgtggcaatatatcctttacacccacataaaattctgacatgtggcaacctggaccccacataaatagaagataa 23204785  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattt 256  Q
    ||||||||| ||| ||||| |||| |||||||||||||||||| || ||||||||||| ||||||||  ||| |||||||||||||||||    
T  23204786 agtgtggttgtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 65 - 262
Target Start/End: Complemental strand, 27864758 - 27864561
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||| ||  || |||||||| |||||||| ||    
T  27864758 aagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaat 27864659  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  || |||||| |||||||||||||||||    
T  27864658 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttccttt 27864561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 43949709 - 43949900
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| || || ||||||||||||||||| ||||| |||||||||||||||||||||   |||| ||| ||||||||||||||||    
T  43949709 gagtgatgatacatgtaccaccctatttggcaatacaccctttatacccatacaaaattctgacacgtggcatattggatcccgcacaaatagaagataa 43949808  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacatttt 257  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||| ||||||    
T  43949809 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 27316619 - 27316813
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaa-ttctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||| ||| | |||||||||||    
T  27316619 agagtgatgatacatttatcatcccatgtgacaatacaccctttacatccacacaaaaattctgacacgtggcaacttggactccaaataaatagaagat 27316718  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||||  |||||||||| | |||||||||||    
T  27316719 aaagtgtggttatgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 64 - 257
Target Start/End: Complemental strand, 43735937 - 43735744
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  43735937 aaagagtgatgatacatgtaccaccccacgtggcaatacaccctttacatccacataaaattctgacacgtgacaacttggatcccacacaaatagaaga 43735838  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| || ||||||||| ||| ||||||||| |||||||||||  |||| |||| | ||||||||  |||| ||||||||||| |||||    
T  43735837 taaagtgtgattgtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 12497148 - 12496956
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||| |||||||||| |||| |||||||| ||||||||  ||||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||    
T  12497148 gagtaatgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataa 12497049  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||| || | ||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||  |||||||||||| |||||||||||    
T  12497048 agtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 31681095 - 31680904
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  |  |||||||| ||||||||||||    
T  31681095 agagtggtgatacatgtagcatcccatgtggcaatacaccctttacacctacataaaattctgacacgtggcaatctaaaccccacataaatagaagata 31680996  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||  |||| |||  || |||||| | ||||||||||    
T  31680995 aagtgtggttgtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 88 - 257
Target Start/End: Complemental strand, 39631272 - 39631102
Alignment:
Q  88 cccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatt 187  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| ||   || ||||||||||||||||||||||||||||||| ||||||||| |    
T  39631272 cccatgtgacaatacatcctttacacccacacaaaattctgacacgtgacatattgaaccccacacaaatagaagataaagtgtggttgtgagatgaact 39631173  T
Q  188 taccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacatttt 257  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||||| ||||||    
T  39631172 taccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 62 - 262
Target Start/End: Complemental strand, 28988669 - 28988470
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    |||||||||| ||||||||||||   | |||||| |||||||||| |||| | || ||||||||||||||  ||||||| ||||||||||||||||||||    
T  28988669 aaaaagagtggtgatacatgtacaccctcatgtgacaatacaccccttac-ctcatacaaaattctgacatatggcaacctggaccccacacaaatagaa 28988571  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    || ||||||||||| ||||||||||||| |||||| |||||| | |||||||||||||||| |||||| |||  ||||||||||||||||||||||||||    
T  28988570 gagaaagtgtggttatgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcctt 28988471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 67 - 217
Target Start/End: Original strand, 51512173 - 51512323
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||| ||||||||||| | || | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  51512173 gagtgatgatacatgtaccaccccacgtggcaatacatctttaatacccacacaaaattctgacacgtggcaacctggaccccacacaaataaaagataa 51512272  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    ||||||||| | ||||||| ||||||||||||| |||||||||||||||||    
T  51512273 agtgtggttataagatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 73 - 260
Target Start/End: Original strand, 48463364 - 48463551
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    ||||||||||||||  | |||||||||||||||||||||||||||| |||||||||||| |||| ||  || |||||||| |||||||| ||||||| ||    
T  48463364 tgatacatgtaccactctatgtggcaatacaccctttacacccacataaaattctgacatgtggtaatctgaaccccacataaatagaaaataaagtatg 48463463  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||| ||||||||| |||||||||||||||||||||||||| |||||||||   |||| |||  || |||||| |||||||||||||||    
T  48463464 gttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcct 48463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 21687200 - 21687005
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||||||||| |||||||| || |||||||||||||  |||||||  |||||||||||||||||||||||||| || || ||| |||||||||||||    
T  21687200 aagagtgatgatatatgtaccaacctatgtggcaatacattctttacattcacacaaaattctgacacgtggcaacctgaactccagacaaatagaagat 21687101  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||| ||||| ||||||||| |||| |||||||  |||||||||  | |||| |||||||||||  ||  |||| ||||||||||||||||||||    
T  21687100 aaagtatggttatgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcct 21687005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 73 - 259
Target Start/End: Complemental strand, 41848157 - 41847971
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    ||||||||||||   ||||||||||||||||||| ||||| |||| ||||||||||||| ||| |||  || ||||||||||||||||||| ||||||||    
T  41848157 tgatacatgtacacccccatgtggcaatacaccccttacatccacgcaaaattctgacatgtgacaatctgaaccccacacaaatagaagagaaagtgtg 41848058  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||| || ||||||||| ||||||| || ||||| |||||||||||||||| |||||  |||| |||| ||||| |||||||||||||    
T  41848057 gttgtgcgatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 73 - 259
Target Start/End: Original strand, 45490227 - 45490413
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    |||||||||||  | || ||||||||||| | | ||||||||||||||| |||||||||||||||||| |||| |||  |||||||||||||||||||||    
T  45490227 tgatacatgtagtaccctatgtggcaatatatcatttacacccacacaagattctgacacgtggcaacctggatcccgtacaaatagaagataaagtgtg 45490326  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||| |||||||||||||| ||| ||||||||||||||| |||||||||| || ||||  ||  ||  ||||||||||||||||||||    
T  45490327 gttgtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 98 - 258
Target Start/End: Complemental strand, 41878567 - 41878407
Alignment:
Q  98 aatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaata 197  Q
    ||||||| ||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||| || || ||||| ||||||||| ||| |||||||    
T  41878567 aatacactctttacaccaacacaaaattctgacacgtgacaatctggaccccacacaaatagaagagaaggtttggttgtgagatgaacttatcaaaata 41878468  T
Q  198 tccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    ||||||||  || |||||||||||| |||||| |||  ||| |||||||||||||||||||    
T  41878467 tccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 94 - 257
Target Start/End: Original strand, 41327478 - 41327641
Alignment:
Q  94 tggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaa 193  Q
    ||||||||||||| |||||| |||| |||||||| ||| |||||||| |||||||||||||||| ||||| ||||||||| | |||||||||||||||||    
T  41327478 tggcaatacaccccttacactcacaaaaaattctaacatgtggcaacctggaccccacacaaattgaagagaaagtgtggatgtgagatgaatttaccaa 41327577  T
Q  194 aatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||| ||| || | |||  |||||||||||||||||  |||  ||||||||  ||||||||||||    
T  41327578 aatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 56215805 - 56215943
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| ||||||||||||    ||||||||| |||||||  ||||||||||||||||||||||||  | ||||| | |||||||||||||||| ||| |    
T  56215805 agagtggtgatacatgtacaccaccatgtggccatacacctcttacacccacacaaaattctgacatatagcaacctagaccccacacaaatag-agaga 56215903  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaat 205  Q
    |||||||||| |||||| ||||| |||||||||| |||||    
T  56215904 aagtgtggttgtgagataaattttccaaaatatcgctaat 56215943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 17619153 - 17619252
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||   || |||||||||||||||||||||    
T  17619153 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 107 - 206
Target Start/End: Original strand, 46412417 - 46412516
Alignment:
Q  107 tttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaata 206  Q
    |||||| | ||||||||||||||||||||||||  |  |||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||    
T  46412417 tttacatctacacaaaattctgacacgtggcaatttaaaccccacataaatagaagataaagtgtggttgtgagaagaacttaccaaaatatctctaata 46412516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 712059 - 711958
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||||||||||||| |||| ||| ||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  712059 aagagaaagtatgtttgtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 711960  T
Q  260 tt 261  Q
    ||    
T  711959 tt 711958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 55272377 - 55272476
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||| | ||||| ||   |||| |||||||||||||||||||    
T  55272377 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 3756264 - 3756344
Alignment:
Q  177 tgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||| ||||||| ||||||||| |||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||    
T  3756264 tgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 32728456 - 32728356
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||| ||||| ||| |||| ||||||||||||||| ||||||| ||   |||| |||||||||||||||||||    
T  32728456 aagagaaagtatgattgtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T
Q  260 t 260  Q
    |    
T  32728356 t 32728356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 48435580 - 48435680
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| || || ||||||||||||||||| || |||||||| ||||||||||||||| ||||||  ||   || ||||||||||||||| |||||    
T  48435580 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 48435679  T
Q  260 t 260  Q
    |    
T  48435680 t 48435680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 35037093 - 35037002
Alignment:
Q  171 tggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||| |||||||||||||||||||||||| |||| ||||||||||||||| | ||||| |    ||||||| |||||||||||||| ||||    
T  35037093 tggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttttcttt 35037002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Original strand, 960890 - 960972
Alignment:
Q  179 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||||||||||||||||| ||||||||  || ||||||||||| | ||||| ||   ||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcctt 960972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 19880147 - 19880074
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  19880147 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 19880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 55272284 - 55272356
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  55272284 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 55272356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 35037200 - 35037125
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| |||| ||||||||||||  ||| |||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  35037200 aaaatagtggtgatacatgtacactcc-atgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 712130 - 712080
Alignment:
Q  89 ccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  712130 ccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 712080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 17619058 - 17619132
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||| ||||||||||||   ||||  ||||||||||||  ||||||||||||||||| |||||| |||||||    
T  17619058 aagagtggtgatacatgtacatccccacctggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 17619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 19880053 - 19879987
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggt 226  Q
    |||| ||||| || || |||||||||||||||||||| ||| ||||| |||||||||||||| ||||    
T  19880053 aagagaaagtatgattgtgagatgaatttaccaaaatgtccataatatatggggtgtacaatagggt 19879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 46827604 - 46827686
Alignment:
Q  57 ttttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| |||||||||| ||||||||||||    |||||||| |||||| |  ||||||||||||||||| |||||| |||||||    
T  46827604 ttttaaaaaagagtggtgatacatgtacacctccatgtggaaatacatctcttacacccacacaaaatcctgacatgtggcaa 46827686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 3756159 - 3756232
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||| ||||||||||||  ||||||||||||||||| |  ||||||||||| |||||  ||||| |||||||    
T  3756159 agagtggtgatacatgtacactcccatgtggcaatacaactcttacacccacataaaatcatgacatgtggcaa 3756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 46827724 - 46827809
Alignment:
Q  177 tgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||| ||||||||||||  | | |||| ||| ||||||||||| | ||||| ||   |||||||||||||||||||||||||||    
T  46827724 tgagataaatttaccaaaacgttcttaatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttccttt 46827809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 49229684 - 49229765
Alignment:
Q  179 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||||||||| ||||||| |||| ||||  ||||||||| ||||||| ||   |||| ||||||| ||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcct 49229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 48435487 - 48435559
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   |||||||| ||||||| |  ||||||||||||||||| |||||| |||||||    
T  48435487 gagtggtgatacatgtacacccccatgtgacaatacatctcttacacccacacaaaatcctgacatgtggcaa 48435559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 50526245 - 50526201
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtgg 136  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  50526245 gtggcaatacaccctttgacacccacacaaaaatctgacacgtgg 50526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 55475217 - 55475273
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccc 148  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||||| | ||||||||    
T  55475217 gtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccc 55475273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 17983817 - 17983754
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  17983817 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 17983754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 29977911 - 29977974
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| ||| ||||||||||||| |||||||||| |  | |||||||||||||||    
T  29977911 gtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaa 29977974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 48183123 - 48183060
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  48183123 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 48183060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 50052502 - 50052439
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  50052502 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 50052439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 5664350 - 5664388
Alignment:
Q  29 aagtcggatgacaaaacattaccaagtattttcaaaaag 67  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  5664350 aagtcggacaacaaaacattaccaagtattttcaaaaag 5664388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 460 - 490
Target Start/End: Complemental strand, 38890223 - 38890193
Alignment:
Q  460 atttcgtgtgttctctctttcttttctctcg 490  Q
    |||||||||||||||||||||||||||||||    
T  38890223 atttcgtgtgttctctctttcttttctctcg 38890193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 960802 - 960850
Alignment:
Q  91 atgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| |||||||||  ||||||||||||||||| |||||| |||||||    
T  960802 atgtgacaatacacctcttacacccacacaaaatcctgacatgtggcaa 960850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 29589811 - 29589751
Alignment:
Q  96 gcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||| || |||||||||||||| ||||| | ||||| | |||||||||||||||    
T  29589811 gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaa 29589751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 32728552 - 32728492
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaat 124  Q
    |||||||| ||||||||||||   ||||||||||||||||||  |||||| |||| |||||    
T  32728552 aaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacgcacaaaaaat 32728492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 182; Significance: 3e-98; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 750209 - 750406
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  750209 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggtaacatggaccccacacaaatagaag 750308  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  750309 ataaagtgtggttttgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcct 750406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 67 - 262
Target Start/End: Complemental strand, 5489968 - 5489773
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  5489968 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 5489869  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  5489868 agtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccttt 5489773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 43570994 - 43571186
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  43570994 gagtgatgatatatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagataa 43571093  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  43571094 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 62 - 261
Target Start/End: Original strand, 48498865 - 48499064
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  48498865 aaaatgagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaa 48498964  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||  ||| ||||||||||||||||||||||    
T  48498965 gataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcctt 48499064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 62 - 257
Target Start/End: Complemental strand, 7448022 - 7447828
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7448022 aaaaagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa 7447923  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||||||| ||||||||| ||| |||||||||  |||||||| |||||||||||||| ||||||||  |||| |||||||||||||||||    
T  7447922 gataaagtgtggttgtgagatgaacttatcaaaatatctgtaatacat-gggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 65 - 262
Target Start/End: Original strand, 24769405 - 24769602
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24769405 aagagtgatgatacatgtaccaccccatgtggcaatacactctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 24769504  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||| |||||| ||  || |||||||||| |||||||||||||    
T  24769505 aaagtgtggttgtgataagaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttccttt 24769602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 50448167 - 50448360
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  50448167 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaacccacaaaaatagaagata 50448266  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    || ||||||| | ||||||| |||| ||||||||||||||||||  |||||||||||| |||||| ||  ||| ||||||||||||||||||||    
T  50448267 aaatgtggttgtaagatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 4401521 - 4401329
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  4401521 agagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcatattggaccccacacaaatagaagata 4401422  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacatttt 257  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||  ||||||||| | ||| ||||||||||| ||||||    
T  4401421 aagtgtggttgtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 23989431 - 23989627
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| |||||||||||||| || || |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  23989431 gagtggtgatacatgtaccaccctatatggcaatacaccctttacacccacacaagattctgacatgtggcaacctggaccccacacaaatagaagataa 23989530  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacattttccttt 262  Q
    ||||||||| |||||| |||||||||||||||||||||||||| |||| |||||| | ||||| ||| | |||||||||||||||||||||||||||    
T  23989531 agtgtggttgtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttccttt 23989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 68 - 259
Target Start/End: Complemental strand, 37814969 - 37814778
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37814969 agtggtgatacatgtaccaccccatgtggcaatacaccctttacatccatataaaattctgacacgtggcaatctggaccccacataaatagaagataaa 37814870  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| | |||| |||  ||||||||| ||||||||||||||    
T  37814869 gtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 2497469 - 2497660
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| ||||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||| |||  |||| |||||| ||||||| ||||    
T  2497469 agagtggtgatacatgtaccacaccatgtggcaatacaccctttatacccacataaaattctgacacgtgacaatctggatcccacataaatagatgata 2497568  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||  |||| |||  || |||||| ||||||||||||    
T  2497569 aagtgtggttgtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 4888235 - 4888085
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||||| || ||||||  ||||| |||||||||||||| |||    
T  4888235 agagtgatgatacatgtacca-cccatgtggcaatatatcctttacatccacacaaaattctgatacatggcaatttggacaccacacaaatagaaaata 4888137  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||||||||| |||||| || |||||||||||||||||||||||||| ||||    
T  4888136 aagtgtggttgtgagataaacttaccaaaatatccctaatacatgggatgta 4888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 48119727 - 48119628
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  48119727 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 44112776 - 44112675
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  44112776 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T
Q  260 tt 261  Q
    ||    
T  44112676 tt 44112675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 35003393 - 35003294
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| ||||  |||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  35003393 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 38336017 - 38335918
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| |||||| ||||||||  |||||| ||   ||||||||||||||||||||||||    
T  38336017 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 41065252 - 41065152
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| ||||||||||  ||||||| ||||||||||||||  ||||||| ||   ||||||||||||||||||||||||    
T  41065252 aagagaaagtatggttgtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T
Q  260 t 260  Q
    |    
T  41065152 t 41065152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 46168482 - 46168383
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| ||| ||||||||||| || | || ||   ||||||||||||||||||||||||    
T  46168482 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 38113202 - 38113296
Alignment:
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||| ||||| |||||||||||||||||||| ||  |||| ||||||||||||||| ||||||| ||   |||||||||||| ||||||||||||    
T  38113202 aagtatggttgtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcct 38113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 45639733 - 45639834
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||||||||||||| ||||  |||||||||||||| || |||| ||   ||| ||||||||||||||||||||    
T  45639733 aagagaaagtatgattgtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcc 45639832  T
Q  260 tt 261  Q
    ||    
T  45639833 tt 45639834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 45427746 - 45427846
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||||| ||||||||| ||||||| ||   || ||| |||||||||||||||||    
T  45427746 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcc 45427845  T
Q  260 t 260  Q
    |    
T  45427846 t 45427846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 35003491 - 35003414
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||| ||||||||| ||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  35003491 aaaaagagtggtgatacatgcacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 32813273 - 32813336
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||| |||||    
T  32813273 gtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaa 32813336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 44112872 - 44112797
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||| ||||||||||||     ||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  44112872 aaagagtggtgatacatgtacaccttcatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 44112797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 45705924 - 45705824
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||||||| |||||| ||| |||| ||||| ||||||||| |  |||| ||   |||||||||||| |||||||||||    
T  45705924 aagagaaagtatggttgtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcc 45705825  T
Q  260 t 260  Q
    |    
T  45705824 t 45705824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 45706017 - 45705945
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||    |||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  45706017 gagtggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 45705945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 35000114 - 35000213
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||| |||||| |||||| |||||||||||||  || |||||| | ||||| ||   || |||||||||||||||||||||    
T  35000114 aagagaaagtatggttgtgagataaatttatcaaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 48119814 - 48119748
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||||||   |||| |||||||||||||  ||||||||||||||||| |||||| |||||||    
T  48119814 tgatacatgtacacccccacgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 48119748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 26440764 - 26440813
Alignment:
Q  97 caatacacccttta-cacccacacaaaattctgacacgtggcaacatgga 145  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatgga 26440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 9474950 - 9474886
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| ||||||    
T  9474950 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaa 9474886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 35000021 - 35000093
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   |||||||||||||||| |  ||||||||| ||||||| |||||| |||||||    
T  35000021 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccatacaaaatcctgacatgtggcaa 35000093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 38113099 - 38113175
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||| |||| |||||||    ||||||| |||||||||  ||||||||||||||||| |||||| |||||||    
T  38113099 aaaagagtggtgattcatgtacacctccatgtgacaatacacctcttacacccacacaaaatcctgacatgtggcaa 38113175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 45639640 - 45639712
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||| ||||||||||||||  ||||||||||||||||| || ||| |||||||    
T  45639640 gagtggtgatacatgtacacccccttgtggcaatacacctcttacacccacacaaaatcctaacatgtggcaa 45639712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 2581941 - 2582004
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  2581941 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 2582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 14427404 - 14427345
Alignment:
Q  202 taatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||| |||| |||||||||| ||||||| ||   ||||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcctt 14427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 26585543 - 26585500
Alignment:
Q  178 gagatgaatttaccaaaatatccctaatacatggggtgtacaat 221  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaat 26585500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 26585657 - 26585582
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||| ||||||||||||   |||||| ||||||||| |  ||||| ||||||||||| |||||| |||||||    
T  26585657 aaagagtggtgatacatgtacacccccatgcggcaatacatctcttacatccacacaaaatcctgacatgtggcaa 26585582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 41758832 - 41758895
Alignment:
Q  94 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    |||||||||||||||| ||| |||||||||| |||||||||| |  ||||||||||| ||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaa 41758895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 46168554 - 46168503
Alignment:
Q  88 cccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||||||||| |  |||||||||||||||||| ||||| |||||||    
T  46168554 cccatgtggcaatacatctcttacacccacacaaaattatgacatgtggcaa 46168503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 50591074 - 50591011
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  50591074 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 50591011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 3000345 - 3000387
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  3000345 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 3000387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 38595180 - 38595222
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  38595180 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 38595222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 45427652 - 45427722
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtgg 136  Q
    |||||| ||||||||||||   ||||||||||||||||||  || || ||||||||||| |||||| ||||    
T  45427652 agagtggtgatacatgtacatccccatgtggcaatacacctcttccatccacacaaaatcctgacatgtgg 45427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 51898757 - 51898715
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  51898757 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 51898715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 13414785 - 13414850
Alignment:
Q  91 atgtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||| ||||||||||||| |||||||||||||| ||| |||||| |  || ||||||||||||||    
T  13414785 atgtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaa 13414850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 41065344 - 41065271
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||| ||||| ||||||   ||||||||||||||||||  ||||| || |||||||| |||||| |||||||    
T  41065344 agagtggtgatatatgtacacccccatgtggcaatacacctcttacatccgcacaaaatcctgacatgtggcaa 41065271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 37649224 - 37649268
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtgg 136  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||    
T  37649224 gtggcaatacactctttgacacccacacaaaaatctgacacgtgg 37649268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 45044634 - 45044570
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    ||||||||||||| ||| ||||||| |||||| ||||||| || || ||||||||||| ||||||    
T  45044634 gtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaa 45044570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 3e-83; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 66 - 262
Target Start/End: Complemental strand, 46941246 - 46941050
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46941246 agagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacataaaattctgacacgtggcaacttggaccccacacaaatagaagata 46941147  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||    
T  46941146 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttccttt 46941050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 40809057 - 40808863
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40809057 gagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 40808958  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || |||||| ||||||||||||||||    
T  40808957 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcctt 40808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 58 - 263
Target Start/End: Complemental strand, 54237297 - 54237092
Alignment:
Q  58 tttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaat 157  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||    
T  54237297 tttccaaatgagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaatattctgacacgtggcaatctggaccccacacaaat 54237198  T
Q  158 agaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  54237197 agaagataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 54237098  T
Q  258 cctttc 263  Q
    | ||||    
T  54237097 cgtttc 54237092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 67 - 262
Target Start/End: Original strand, 24688310 - 24688505
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  24688310 gagtgatgatacatgtaccaccccatgtggcaatacaccatttacccccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 24688409  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||||||    
T  24688410 agtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttccttt 24688505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 42394324 - 42394518
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||    
T  42394324 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaaga 42394423  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  42394424 taaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 64 - 261
Target Start/End: Original strand, 47190931 - 47191127
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  47190931 aaagagtgatgatacatgtaccattccatgtggcaatacaccctttacacccacacaaaattctgacatgtggtaacttggaccccacacaaatagaaga 47191030  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    |||||||||||| ||||||||| ||| ||||||||| ||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  47191031 taaagtgtggttgtgagatgaacttatcaaaatatctctaatacat-gggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcctt 47191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 65 - 262
Target Start/End: Original strand, 54246054 - 54246251
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  54246054 aagagtgatgatacatgtaccaccccatgtggcaatacattctttacacccacataaaattctgacatgtggcaacctggaccccacacaaatagaagat 54246153  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| ||||||||| |||| |||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  54246154 aaagtgtggttgtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccttt 54246251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 66 - 260
Target Start/End: Complemental strand, 25413874 - 25413680
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  25413874 agagtgatgatacatgtaccaccccatatgacaatacaccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaatagaagata 25413775  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25413774 aagtgtggttgtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 25413680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 64 - 259
Target Start/End: Complemental strand, 36150325 - 36150130
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36150325 aaagagtggtgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggactccacacaaatagaaga 36150226  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||| ||||||| ||||||||||| |||  |||||| |||||||||||||||||    
T  36150225 taaagtgtggttgtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 67 - 258
Target Start/End: Complemental strand, 40480941 - 40480750
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  40480941 gagtgatgatacatgtatcaccccatgcggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccctacacaaatagaagataa 40480842  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||  || |||  |||||||||||||||||||||||    
T  40480841 agtgtggttgtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 53581766 - 53581956
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53581766 gagtgatgatacctgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 53581865  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||| || |||||||||| ||||| |||  ||| ||||||||||||||||||    
T  53581866 agtgtggttgtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 42100880 - 42100688
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||| |||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||||||||| |||||||    
T  42100880 gagtgatcatacatgtaccacctcatgtggcaatgcaccctttacacccacataaaattctgacacgtggcaacctgaactccacacaaataaaagataa 42100781  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    | ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  42100780 aatgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 45126836 - 45127028
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| || |||| ||  ||||||||||| |||||||| ||||    
T  45126836 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccacataaaattctggcatgtggtaatctggaccccacataaatagaaaataa 45126935  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||| ||||||||||||||    
T  45126936 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 52630021 - 52629870
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  52630021 agagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtagcaacctggaccctacataaatagaagata 52629922  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||||||||| ||||||||| |||| ||||||||| |||||||| |||||||    
T  52629921 aagtgtggttgtgagatgaacttacaaaaatatccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 65 - 261
Target Start/End: Original strand, 53273599 - 53273786
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||||| |||||| ||| |||| |||||| ||||| |||||    
T  53273599 aagagtgatgatacatgtaccatcccatgtggcaatacacct---------acacaaaattctgatacgtggtaacctggatcccacataaataaaagat 53273689  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||  || | ||||||| |||||||||||||    
T  53273690 aaagtatggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcctt 53273786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 1078412 - 1078229
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||    
T  1078412 aagagtgatgatacatgtaccacctcatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctgaactccacacaaatagaagat 1078313  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |        || |||||||||  ||| ||||||| ||||||||||  ||||||||||| |||| |||||  ||||||||||||||||||||||    
T  1078312 a--------ttgtgagatgaacctacaaaaatat-cctaatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 67 - 257
Target Start/End: Complemental strand, 27748746 - 27748565
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| |||||||||||||| ||||||||||||||||||          |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27748746 gagtggtgatacatgtaccaccccatgtggcaatacaccg---------acacaaaattctgacatgtggcaacctggaccccacacaaatagaagataa 27748656  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||| | ||| ||||||||| |||||||||||||||||||||||  |||||| |||| |||||| |||  || |||||||||||||||||||    
T  27748655 agtattgttgtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 262
Target Start/End: Original strand, 11064627 - 11064823
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||| ||||||||||||  ||   |||| |||||||||| |||||||||||||||||| ||||| |||| ||  | ||||||||||||||||||||    
T  11064627 aaagagtggtgatacatgtacactcttgtgtgacaatacaccccttacacccacacaaaattttgacatgtggtaatctagaccccacacaaatagaaga 11064726  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
      ||||||| || ||||||||||| | ||||||||| ||||  ||| |||||||||||| |||||| |||  || | ||||||  ||||||||||||||    
T  11064727 gtaagtgtgattatgagatgaattaatcaaaatatctctaaagcatagggtgtacaatgaggtgtatgaataaatgatgttca--taacattttccttt 11064823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 51249449 - 51249343
Alignment:
Q  118 acaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||||||||||||| |||||||  |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||| ||||||    
T  51249449 acaaaattctgacatgtggcaatctggatcccacacaaatagaagagaaagtgtggttgtgagatgaatttaccaaaatatccttaatgcatgaggtgta 51249350  T
Q  218 caatggg 224  Q
     ||||||    
T  51249349 taatggg 51249343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 262
Target Start/End: Complemental strand, 9434316 - 9434121
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| ||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||| |||||||     |        | ||  |||| ||    
T  9434316 gagtggtgatacatgtacactcccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaaggaaaagtgagaggagatgaaagagaa 9434217  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| | ||||| ||   |||||||||||||||||||||||||||    
T  9434216 agtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttccttt 9434121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 4190266 - 4190368
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||||||||||||||||| |||||||||  |||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  4190266 aagagaaagtatggttgtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T
Q  260 ttt 262  Q
    |||    
T  4190366 ttt 4190368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 10457893 - 10457994
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||| ||||||||||||||||| |||| ||||||||||||||| ||||||| ||   || |||||||||||||||||||||    
T  10457893 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 10457992  T
Q  260 tt 261  Q
    ||    
T  10457993 tt 10457994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 25996356 - 25996267
Alignment:
Q  171 tggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||| |||||||||||||||||||| ||| ||||| ||||||||||||||  | |||| ||   |||||||||||||||||||||||||    
T  25996356 tggttgtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcct 25996267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 29558232 - 29558337
Alignment:
Q  157 tagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattt 256  Q
    ||||| ||||| |||| || ||||||||||||||||| |||| ||||||| || |||||||||||| | |||| |||  |||||||||||| |||||||     
T  29558232 tagaaaataaaatgtgattgtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacattg 29558331  T
Q  257 tccttt 262  Q
    ||||||    
T  29558332 tccttt 29558337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 26141606 - 26141543
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||    
T  26141606 gtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaa 26141543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 29556864 - 29556956
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaat 157  Q
    |||||||| ||||||||||||||   |||||||||||||||  |||||||||| | |||| ||||||| |||||||| || |||||||||||||    
T  29556864 aaagagtggtgatacatgtaccactacatgtggcaatacacaatttacacccatataaaa-tctgacatgtggcaacctgaaccccacacaaat 29556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 52627978 - 52628079
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||||||||||| | |||| |||| |||||||||| || |||| ||   ||||||||||| ||||||||||||    
T  52627978 aagagaaagtatgattgtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcc 52628077  T
Q  260 tt 261  Q
    ||    
T  52628078 tt 52628079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 19148965 - 19148882
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatgga 145  Q
    ||||||| || ||| ||||||||   ||||||||||||||||||  ||||||||||||||||||||||||  ||||||| ||||    
T  19148965 aaaaagaatggtgacacatgtacacccccatgtggcaatacaccacttacacccacacaaaattctgacatatggcaacctgga 19148882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 34791928 - 34791829
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||  ||||| |||||||| |||| ||| ||||||  |||||| ||   ||||||||||||||||||||||||    
T  34791928 aagagaaagtatggttgtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 40488216 - 40488174
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacacc 105  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  40488216 aaaagagtgatgatacatataccatcctatgtggcaatacacc 40488174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 20764989 - 20764932
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggacccc 149  Q
    |||| ||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  20764989 gtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggacccc 20764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 51757789 - 51757713
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| ||||| |||||||||||| | |||||||||||||| |||  ||||||||||||| ||| |||||| |||||||    
T  51757789 aaaatgagtggtgatacatgtac-accccatgtggcaatatacctcttacacccacacacaatcctgacatgtggcaa 51757713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 4190197 - 4190245
Alignment:
Q  91 atgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  4190197 atgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 4190245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 17470431 - 17470494
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| |  || ||||||||||||||    
T  17470431 gtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaa 17470494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 33644226 - 33644289
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  33644226 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 33644289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 34792019 - 34791949
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| |||||||| ||| ||||||| ||||||||||||  ||||| ||||||||||| |||||| |||||||    
T  34792019 agtggtgatacatctac-atcccatatggcaatacacctcttacatccacacaaaatcctgacatgtggcaa 34791949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 49607440 - 49607503
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||| |||||||||    
T  49607440 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaa 49607503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Complemental strand, 51419430 - 51419371
Alignment:
Q  97 caatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||| |||||| ||||||||||||| ||||||||||||| |||| |||||| |||||    
T  51419430 caatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaa 51419371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 53982037 - 53982100
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  53982037 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 53982100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 54429180 - 54429235
Alignment:
Q  74 gatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctga 129  Q
    |||||||||||   ||||| ||||||||||||  ||||||||||||||||||||||    
T  54429180 gatacatgtacacccccatatggcaatacacctcttacacccacacaaaattctga 54429235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 10457798 - 10457872
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||| |||||||||||    | ||||||||||||||||  ||||| ||||||||||| |||||| |||||||    
T  10457798 aagagtgttgatacatgtataccctcatgtggcaatacacctcttacatccacacaaaatcctgacatgtggcaa 10457872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 11095427 - 11095385
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  11095427 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 45058626 - 45058564
Alignment:
Q  93 gtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||| ||||||||| |||| ||||||| ||| | | ||||||||| |||||    
T  45058626 gtggcaatacacccttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaa 45058564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 52629326 - 52629368
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  52629326 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 52629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 11347992 - 11347940
Alignment:
Q  97 caatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccc 148  Q
    ||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  11347992 caatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccc 11347940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 31456717 - 31456757
Alignment:
Q  95 ggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  31456717 ggcaatacaccctttgacacccacacaaaaatctgacacgt 31456757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 7e-81; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 66 - 262
Target Start/End: Original strand, 36743390 - 36743586
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36743390 agagtgatgatacatgtaccaccccatgtggcaatacaccatttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 36743489  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  36743490 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccttt 36743586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 72 - 259
Target Start/End: Complemental strand, 29705549 - 29705362
Alignment:
Q  72 atgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgt 171  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29705549 atgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccgcacaaatagaagataaagtgt 29705450  T
Q  172 ggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  29705449 ggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 11582959 - 11582766
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  11582959 agagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 11582860  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  11582859 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 65 - 262
Target Start/End: Original strand, 30660648 - 30660845
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  30660648 aagagtgatgatacatgtatcatcctatgtggcaatacaccctttacatccacataaaattctgacacgtggcaacctggaccccacacaaatagaagat 30660747  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||  |||||||||||||||||||||||||||    
T  30660748 aaagtgtggttgtaagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttccttt 30660845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 2165875 - 2166063
Alignment:
Q  71 gatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtg 170  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  2165875 gatgatacatgtaccatcccatgtgacaatacaccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaatagaagataaagtg 2165974  T
Q  171 tggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||  || ||||||||||||| |||||||    
T  2165975 tggttatgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 68 - 260
Target Start/End: Original strand, 42197344 - 42197536
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  42197344 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattttgacacgtggcaatctggaccccacacaaatagaagataaa 42197443  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||| ||||||||| ||||||||||||||||||||||| | |||| ||||||||||||||||  || ||||||||||||||||||||||    
T  42197444 gtgtggttgtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcct 42197536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 62 - 257
Target Start/End: Original strand, 30912465 - 30912660
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  30912465 aaaaagagtgatgatacatgtaccaccccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacctagaccccacacaaatagaa 30912564  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||| ||| |||| ||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||    
T  30912565 gataaggtgcggttgtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 67 - 260
Target Start/End: Complemental strand, 2547188 - 2546995
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  2547188 gagtgatgatacatgtaccaccctatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaatagaagataa 2547089  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| |||||| ||  ||| |||||||||||||||||||||    
T  2547088 agtgtggttgtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 2546995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 66 - 258
Target Start/End: Complemental strand, 45397508 - 45397317
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  45397508 agagtgatgatacatgtacca-cccatgtggcaacacaccctttacacccacacaaaattctgacacgtggcaatctggagcccacacaaatagaagata 45397410  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    || ||||||| ||||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||  ||||||||||| |||||||||||    
T  45397409 aattgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 67 - 262
Target Start/End: Complemental strand, 42295386 - 42295192
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||| |||||||| ||||||| ||| |||||||||||||    
T  42295386 gagtgatgataaatgtaccatcctatgtggcaatataccctttacatccacacaaaattctgacatgtggcaacttggaccc-acataaatagaagataa 42295288  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||| ||||    
T  42295287 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttttcttt 42295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 73 - 257
Target Start/End: Original strand, 29800864 - 29801048
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||||| |||||||||||||||||||    
T  29800864 tgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagataaagtgtg 29800963  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  || |||||| ||||||||||||    
T  29800964 gttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 63 - 257
Target Start/End: Complemental strand, 20148956 - 20148762
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||| ||||||| |    
T  20148956 aaaagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatg 20148857  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  20148856 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 260
Target Start/End: Complemental strand, 31384856 - 31384663
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  31384856 gagtgatgatatatgtaccaccccatgtggcaatataccctttacatccacataaaattctgacacgtagcaacctggaccccacacaaatagaagataa 31384757  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |  |||| |||  |||||||||||||||| | ||||||    
T  31384756 agtgtggttgtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaatactttcct 31384663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 90 - 262
Target Start/End: Complemental strand, 5755072 - 5754900
Alignment:
Q  90 catgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaattta 189  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||| |||    
T  5755072 catggggcaatacaccctttacacccacacaaaattctaacacgtggcaacttggatcccacataaatagaagataaagtgtggttgtgagatgaactta 5754973  T
Q  190 ccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||  || ||||||||||||||||||||||||    
T  5754972 ccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttccttt 5754900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 68 - 257
Target Start/End: Complemental strand, 26125825 - 26125637
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    |||| ||||| |||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||  ||||||| ||| ||||||||||||||    
T  26125825 agtggtgatatatgtaccaccccatgtggcaatacaccctttacacccgcataaaattctgacacgtggcaatctggaccc-acataaatagaagataaa 26125727  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||  |||| |||  ||||||||| ||||||||||||    
T  26125726 gtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 67 - 217
Target Start/End: Complemental strand, 9241744 - 9241594
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  9241744 gagtgatgatacatgtaccaccccatgtggcaacacaccctttgcacccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 9241645  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    ||||||||| ||||||||| |||| ||||||||||||||| || |||||||    
T  9241644 agtgtggttgtgagatgaacttacaaaaatatccctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 64 - 259
Target Start/End: Complemental strand, 1375737 - 1375542
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||| |||||||||||||| || ||||| |||||||  |||||||||||||||| ||||| |||||||||||  || || ||||||||||||||||    
T  1375737 aaagagtggtgatacatgtaccaccctatgtgacaatacattctttacacccacacaagattctaacacgtggcaatctgaactccacacaaatagaaga 1375638  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||  || ||||||||||||| |||||||    
T  1375637 taaagtgtagttgtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 3743963 - 3743806
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||  || |||| ||| |||||||||||||    
T  3743963 gagtgatgatatatgtaccaccccatgtagcaatacaccctttacacccacataaaattctgacacgtggcaatctgaaccctacataaatagaagataa 3743864  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggg 224  Q
    ||||||||| ||||||||| ||| |||||||| | ||||| |||||||||| ||||||    
T  3743863 agtgtggttgtgagatgaacttatcaaaatatacttaatatatggggtgtataatggg 3743806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 90 - 260
Target Start/End: Original strand, 40528565 - 40528736
Alignment:
Q  90 catgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaattta 189  Q
    |||||| ||||| | | |||||| |||||||||||| ||||| ||| |||| || ||||||||||||||||||| ||||||||||| |||||| ||||||    
T  40528565 catgtgacaatatatcatttacatccacacaaaattatgacatgtgacaacttgaaccccacacaaatagaagagaaagtgtggttgtgagataaattta 40528664  T
Q  190 ccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacattttcct 260  Q
     |||||| ||||||||| ||||||||||||||||||| |  ||| | |||||||||||||||  ||||||||    
T  40528665 tcaaaatgtccctaatatatggggtgtacaatggggtttgtgaataaaagggtgttcatgtattattttcct 40528736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 42699353 - 42699259
Alignment:
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||    
T  42699353 ataaagtgtggttgtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 35181615 - 35181513
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  35181615 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T
Q  260 ttt 262  Q
    |||    
T  35181515 ttt 35181513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 34304887 - 34304786
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||   |||| |||||||||||||||||||    
T  34304887 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 34304788  T
Q  260 tt 261  Q
    ||    
T  34304787 tt 34304786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 18066719 - 18066819
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||| |||||||| |  |||| ||   ||||||||||||||||||||||||    
T  18066719 aagagaaagtatggttgtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcc 18066818  T
Q  260 t 260  Q
    |    
T  18066819 t 18066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 16603633 - 16603727
Alignment:
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||| ||||| |||||||||||||||||||| ||  |||| ||||||||||| |||  |||||| ||   |||||||| ||||||||||||||||    
T  16603633 aagtatggttgtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcct 16603727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 33629994 - 33630096
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| | ||| ||||||||| |||| ||||| |||||||| ||| |||||||||||| |||||| ||   |||||||||| ||||||||||| |    
T  33629994 aagagaaagtatagttgtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttttc 33630093  T
Q  260 ttt 262  Q
    |||    
T  33630094 ttt 33630096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 34304981 - 34304908
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||| |||||||||||| | ||||||||||||||||||  ||||||||| ||||||| |||||| |||||||    
T  34304981 aagagtggtgatacatgtac-accccatgtggcaatacacctcttacacccaaacaaaatcctgacatgtggcaa 34304908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 10678060 - 10678132
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   |||||||||||||||| |  ||||||||||||||||| |||||| |||||||    
T  10678060 gagtggtgatacatgtacacccccatgtggcaatacatctcttacacccacacaaaatcctgacatgtggcaa 10678132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 258
Target Start/End: Original strand, 16358839 - 16358933
Alignment:
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttc-atgtaacattttc 258  Q
    ||||| ||||| ||||||||||||| |||||||| | |||| |||||| |||||||| ||||||| ||   |||||| ||| |||||||||||||    
T  16358839 aaagtatggttgtgagatgaatttatcaaaatattcttaatgcatgggatgtacaatagggtgtatgattaaagggtcttcaatgtaacattttc 16358933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 10678153 - 10678210
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||| ||||| ||||| |||||||||||||||||||| ||| ||||| ||||||||||    
T  10678153 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatatatggggtgta 10678210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 35181685 - 35181636
Alignment:
Q  90 catgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  35181685 catgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 35181636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 33629901 - 33629973
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||| ||||||   ||||||||||||||||||  ||||||| |||||||||| ||||| |||||||    
T  33629901 gagtggtgatatatgtacacccccatgtggcaatacacctcttacacctacacaaaattttgacatgtggcaa 33629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 15048255 - 15048193
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| ||||| |||||||| |||||||||| || ||||||||||| |||||    
T  15048255 gtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaa 15048193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 15197359 - 15197422
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  15197359 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 15197422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 16383403 - 16383466
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  16383403 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 16383466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 460 - 490
Target Start/End: Complemental strand, 2468128 - 2468098
Alignment:
Q  460 atttcgtgtgttctctctttcttttctctcg 490  Q
    |||||||||||||||||||||||||||||||    
T  2468128 atttcgtgtgttctctctttcttttctctcg 2468098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 5957856 - 5957898
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  5957856 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 5957898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 460 - 490
Target Start/End: Original strand, 21482647 - 21482677
Alignment:
Q  460 atttcgtgtgttctctctttcttttctctcg 490  Q
    |||||||||||||||||||||||||||||||    
T  21482647 atttcgtgtgttctctctttcttttctctcg 21482677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 37038505 - 37038547
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  37038505 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 37038547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 16056477 - 16056412
Alignment:
Q  91 atgtggcaataca-ccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||| ||||||| ||||| |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  16056477 atgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 16056412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 490
Target Start/End: Original strand, 21480841 - 21480869
Alignment:
Q  462 ttcgtgtgttctctctttcttttctctcg 490  Q
    |||||||||||||||||||||||||||||    
T  21480841 ttcgtgtgttctctctttcttttctctcg 21480869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 3e-80; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 21280123 - 21279928
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21280123 aagagtgatgatacatgtaccaccccatgtggcaatataccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagat 21280024  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||  ||||| ||  |||||||||||||||||||||||||    
T  21280023 aaagtgtggttgtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcct 21279928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 65 - 260
Target Start/End: Original strand, 9698239 - 9698434
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  9698239 aagagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagat 9698338  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  9698339 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 9698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 63 - 262
Target Start/End: Original strand, 26669913 - 26670112
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||| | ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  26669913 aaaagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaag 26670012  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  26670013 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttt 26670112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 67 - 257
Target Start/End: Complemental strand, 30736174 - 30735984
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  30736174 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccccacataaatagaagataa 30736075  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||| || ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||  ||  ||||||||||||||||||    
T  30736074 agtgtgattgtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 65 - 262
Target Start/End: Original strand, 7273241 - 7273438
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||| ||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  7273241 aagagtgatgatgcatgtaccaccccatgtggtaatacactctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagat 7273340  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  7273341 aaagtgtgattgtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttccttt 7273438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 24203895 - 24204085
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  24203895 gagtgatgatacatgtaccactccatgtgacaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaatataa 24203994  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||  || |||||||||||||||||||    
T  24203995 agtgtggttgtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 53 - 262
Target Start/End: Complemental strand, 3213606 - 3213397
Alignment:
Q  53 agtattttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccaca 152  Q
    |||||||| || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  3213606 agtattttaaataagagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccaca 3213507  T
Q  153 caaatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaac 252  Q
     |||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||| | |||| |||  ||||||||| |||||||    
T  3213506 taaatagaagataaagtatggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaac 3213407  T
Q  253 attttccttt 262  Q
    ||||||||||    
T  3213406 attttccttt 3213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 57 - 262
Target Start/End: Complemental strand, 7367751 - 7367546
Alignment:
Q  57 ttttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||    
T  7367751 ttttaaaaaagaatgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggatcccacataaa 7367652  T
Q  157 tagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattt 256  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |||||| |||  || | ||||||| ||||||||    
T  7367651 tagaaaataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattt 7367552  T
Q  257 tccttt 262  Q
    ||||||    
T  7367551 tccttt 7367546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 7292933 - 7292744
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7292933 tgatacatgtaccaccccatgtggcaatacaccctttacacacaaacaaaattctgacacgtggcaacctggaccccacacaaatagaagataaagtgtg 7292834  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||| ||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||  || ||||||| ||||||||||||||||    
T  7292833 gttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttccttt 7292744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 13743130 - 13743321
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    |||| |||||||||||||| || ||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13743130 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13743229  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||  || |||||||||||||||||||||    
T  13743230 gtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 68 - 259
Target Start/End: Original strand, 13748630 - 13748821
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    |||| |||||||||||||| || ||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13748630 agtggtgatacatgtaccaccctatgtggcaatatatcctttacacccacacaagattctgacacgtggcaacctggaccccacacaaatagaagataaa 13748729  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| || |||| |||  || |||||||||||||||||||||    
T  13748730 gtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 65 - 262
Target Start/End: Complemental strand, 26466993 - 26466796
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||| ||||| || ||||||||||||||| |||||||||| ||||||| |||| |||||||||| || |||||| |||||||||||||    
T  26466993 aagagtgatgatacatttaccaccctatgtggcaatacaccttttacacccatacaaaatcctgatacgtggcaacctgaaccccaaacaaatagaagat 26466894  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  26466893 aaagtgtggttgtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttccttt 26466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 62 - 259
Target Start/End: Complemental strand, 30014540 - 30014343
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| | ||||||||    
T  30014540 aaaaaaagtgatgatacatgtatcaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggtaacttggaccccatataaatagaa 30014441  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| ||||| ||||||||| |||||||||||| ||||||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||    
T  30014440 gataaagtatggttgtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 66 - 260
Target Start/End: Original strand, 21293584 - 21293778
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||    
T  21293584 agagtggtgatacatgtaccacctcatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggaccccacataaatagaagata 21293683  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||   |||| |||  ||||||||| |||||||||||||||    
T  21293684 aagtgtggttgtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcct 21293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 257
Target Start/End: Complemental strand, 27441641 - 27441544
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||||||| || |||||||| ||||||| ||   ||||||||||||||||||||||    
T  27441641 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 33242502 - 33242401
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||||||||| ||| ||||||||||||||||||||  |||||| ||   || |||||||||||||||||||||    
T  33242502 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcc 33242403  T
Q  260 tt 261  Q
    ||    
T  33242402 tt 33242401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 33254012 - 33253913
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| || || ||||||||||||||||| || |||||||| ||||||||||||||| ||||||  ||   || |||||||||||||||||||||    
T  33254012 aagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 31109245 - 31109323
Alignment:
Q  182 tgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||| ||||||||||||| | ||||||||||| |||||| |||| ||   |||||||||||||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcct 31109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 33242595 - 33242523
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  33242595 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 33242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 27441736 - 27441662
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||| ||||||||||||   ||||||||||||||||||  ||||||||||| ||||| |||||| |||||||    
T  27441736 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 27441662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 22880732 - 22880669
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  || |||||||| |||||    
T  22880732 gtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaa 22880669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 31109125 - 31109202
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||| ||| |||||| |   || |||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  31109125 aaaaagagtgttgacacatgtgcacccctatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 31109202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 33254107 - 33254034
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||| ||||||||||||    ||||||||||||||||| |||| ||||||||||||| | |||| |||||||    
T  33254107 agagtggtgatacatgtacacctccatgtggcaatacaccttttatacccacacaaaatccggacatgtggcaa 33254034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 4231574 - 4231637
Alignment:
Q  93 gtggcaatacaccctttac-acccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || | |||||||||||| ||||||||||||| | ||||||||| |||||    
T  4231574 gtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaa 4231637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 15508098 - 15508035
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  15508098 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 15508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 15990116 - 15990053
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  15990116 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 15990053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 30341434 - 30341371
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  30341434 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 30341371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 31976274 - 31976337
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||  ||||| ||||| |||||    
T  31976274 gtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaa 31976337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 32869704 - 32869767
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  32869704 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 32869767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 63 - 262
Target Start/End: Complemental strand, 881 - 682
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||| | ||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  881 aaaagagcggtgatatatgtaccacctcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacctggactccacacaaatagaag 782  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  781 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttccttt 682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 7e-78; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 30838826 - 30838631
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30838826 aagagtgatgatacatgtaccaccccatgtggcaatacaccttttacacctacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 30838727  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  | ||||| ||  |||||||||||||||||||||||||    
T  30838726 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 30838631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 19047352 - 19047158
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||    
T  19047352 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaaga 19047253  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  19047252 taaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 1750606 - 1750414
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||  ||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1750606 gagtgatgatatttgtaccaccccatgtggcaacacaccctttacactcacacaaaattctgacacgtggcaatctggaccccacacaaatagaagataa 1750507  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  1750506 agtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 66 - 262
Target Start/End: Original strand, 4764633 - 4764829
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4764633 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagata 4764732  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||||||||  || |||||| |||||||||||||||||    
T  4764733 aagtgtggttgtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttccttt 4764829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 61 - 257
Target Start/End: Original strand, 43490303 - 43490499
Alignment:
Q  61 caaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaataga 160  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| |||||||    
T  43490303 caaaaagagtgatgctacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacataaataga 43490402  T
Q  161 agataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||  ||||||||||||||||||||||    
T  43490403 agataaagtgtggttatgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 66 - 262
Target Start/End: Original strand, 12302160 - 12302356
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||| ||||||||||||| || |||||||||||||||| |||||||| ||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||    
T  12302160 agagcgatgatacatgtatcaccccatgtggcaatacatcctttacatccacacaaaattctgacacatggtaacctggaccccacataaatagaagata 12302259  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  12302260 aagtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttccttt 12302356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 67 - 259
Target Start/End: Complemental strand, 16096940 - 16096747
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggacccc-acacaaatagaagata 165  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| || |||||||||    
T  16096940 gagtgatgatacatgtaccacatcatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttagacccccacataagtagaagata 16096841  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| |||||| || | ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  16096840 aagtgtggttgtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 67 - 261
Target Start/End: Original strand, 43335671 - 43335865
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  43335671 gagtgatgatacatgtaccaccccatgtggcaatataccttttacatccacacaaaattctgacacgtggcaacctggatcccacataaatagaagataa 43335770  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||  || | ||||||| |||||||||||||    
T  43335771 agtgtagttgtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcctt 43335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 42849768 - 42849916
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaa 167  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  42849768 agtgatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaa-ataaa 42849866  T
Q  168 gtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  42849867 gtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgta 42849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 64 - 258
Target Start/End: Original strand, 34817681 - 34817875
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||||||||||||||||   ||||||||||||| | ||| ||||||||| |||||||||||||| |||||||| |||| |||  ||||||||||||    
T  34817681 aaagagtgatgatacatgtacacccccatgtggcaatgctccccttacacccatacaaaattctgacatgtggcaacctggatcccgtacaaatagaaga 34817780  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
     ||||||||||| |||||||||||||||||||| | | || | |||||||||||||||| |||||  |||  |||||||||||||||||||||||    
T  34817781 gaaagtgtggttgtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 13780676 - 13780835
Alignment:
Q  100 tacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaatatc 199  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||||    
T  13780676 tacaccctttacacctatacaaaattctgacatgtggcaacctggaccccacataaatagaagagaaagtgtggttgtgagatgaatttatcaaaatatc 13780775  T
Q  200 cctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||  ||||||||||||||| |||||  |||  ||  ||||| ||||||||||||||    
T  13780776 cctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 72 - 260
Target Start/End: Complemental strand, 42026956 - 42026766
Alignment:
Q  72 atgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgt 171  Q
    |||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||  | ||||| | |||||||||||||||||| | |||||||    
T  42026956 atgatacatgtacacctccatgtggcaatacaccccttacacccacacaaaattctgacatcttgcaacctagaccccacacaaatagaaaagaaagtgt 42026857  T
Q  172 ggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataa--gggtgttcatgtaacattttcct 260  Q
     ||| |||||||||||| |||||||||||||||| |  ||| ||||||||||  |||| |||  ||  |||||||||||||||||||||||    
T  42026856 agttgtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcct 42026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 39149201 - 39149354
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||| |||||| ||  | ||||| ||||||||| ||||||    
T  39149201 agagtgatgatacatgtacca-cccatgtggtaatacaccttttacacccacacaaaattatgagacgtggtaatttagaccc-acacaaataaaagata 39149298  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaat 221  Q
    |||||| ||| || |||||| ||||||||||||| ||||||||| || ||||||||    
T  39149299 aagtgtagttgtgggatgaacttaccaaaatatctctaatacataggatgtacaat 39149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 8896542 - 8896681
Alignment:
Q  118 acaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgta 217  Q
    |||||||||||||| |||||||| || ||| ||||||||||||| | |||||||| || |||||||||||||||||||||| |||| |  || |||||||    
T  8896542 acaaaattctgacatgtggcaacctgaacctcacacaaatagaaaagaaagtgtgattgtgagatgaatttaccaaaatattcctattgtatagggtgta 8896641  T
Q  218 caatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||  |||  |||  ||||||||||||||||||||||    
T  8896642 caatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 43114656 - 43114554
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  43114656 aagagaaagtatggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T
Q  260 ttt 262  Q
    |||    
T  43114556 ttt 43114554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 33229381 - 33229303
Alignment:
Q  180 gatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa-ataagggtgttcatgtaacatttt 257  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 11825655 - 11825752
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||| ||||| || || ||||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||    
T  11825655 aagagaaagtatgattgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 16804067 - 16803966
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| ||| |||||| |||||||| |||||| |||||||| ||||||| ||   ||||||||||||||||||||||||    
T  16804067 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T
Q  260 tt 261  Q
    ||    
T  16803967 tt 16803966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 16843349 - 16843248
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| ||| |||||| |||||||| |||||| |||||||| ||||||| ||   ||||||||||||||||||||||||    
T  16843349 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T
Q  260 tt 261  Q
    ||    
T  16843249 tt 16843248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 263
Target Start/End: Original strand, 34895640 - 34895845
Alignment:
Q  58 tttcaaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaat 157  Q
    |||| ||||||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||     |        | ||    
T  34895640 tttccaaaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaaggaaaagggagaggagat 34895739  T
Q  158 agaagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
      |||||||||| || || ||||||||||||||||| || |||||||| ||||||||||||||| ||||||  ||   || ||||||||||||||| |||    
T  34895740 gaaagataaagtatgattgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacacttt 34895839  T
Q  258 cctttc 263  Q
    ||||||    
T  34895840 cctttc 34895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 41281975 - 41282072
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||| ||||| ||||| ||||||||| ||| |||||| |||||||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||    
T  41281975 aagagaaagtatggttgtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 12415461 - 12415560
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||| || |||||||||| |||||||| |||||||||||||||  |||||| ||   ||||||||||||||||||||||||    
T  12415461 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 12427521 - 12427620
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||| || |||||||||| |||||||| |||||||||||||||  |||||| ||   ||||||||||||||||||||||||    
T  12427521 aagagaaagtatggttgtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 18491798 - 18491704
Alignment:
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||| ||||| |||||||||||||||||||| | | |||| |||| |||||||||| ||||||| ||   |||||||||||||||||||||||||    
T  18491798 aagtatggttgtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 18491704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 966835 - 966936
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| || || |||||||||||||||||||  | | |||| ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||    
T  966835 aagagaaagtatgtttgtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 966934  T
Q  260 tt 261  Q
    ||    
T  966935 tt 966936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 40613976 - 40613913
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||    
T  40613976 gtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaa 40613913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 18491902 - 18491825
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| || ||| |||||||    
T  18491902 aaaaagagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctaacatgtggcaa 18491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 41281877 - 41281954
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||| ||||||||||||   ||||| ||||||||||||  ||||||||||||||||| |||||| |||||||    
T  41281877 aaaaagagtggtgatacatgtacacccccatatggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 41281954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 6518398 - 6518474
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||| ||||||||||||    ||||||| ||||||||| |||||||||||||||||| |||||| |||||||    
T  6518398 aaaagagtggtgatacatgtacacctccatgtgtcaatacaccttttacacccacacaaaatcctgacatgtggcaa 6518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 6518487 - 6518566
Alignment:
Q  177 tgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||| | ||||| | | ||| |||||||||||||||||||    
T  6518487 tgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatg-attaaaggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 11825562 - 11825634
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  11825562 gagtggtgatacatgtacatccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 11825634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 12415368 - 12415432
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgaca 131  Q
    ||||| ||||||||||||  |||||||||||||||||||  ||||| ||||||||||||||||||    
T  12415368 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgaca 12415432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 12427428 - 12427492
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgaca 131  Q
    ||||| ||||||||||||  |||||||||||||||||||  ||||| ||||||||||||||||||    
T  12427428 gagtggtgatacatgtacactcccatgtggcaatacacctcttacatccacacaaaattctgaca 12427492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 12531567 - 12531643
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||||||||||||||||    |||| ||||||||||||  ||||||||||||||||| |||||| |||||||    
T  12531567 aaaagagtgatgatacatgtacacctccatatggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 12531643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 4451951 - 4452012
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaat 221  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||| |||  ||||||||||    
T  4451951 aagagaaagtatggttgtgagatgaatttaccaaaatatccctaatgcatatggtgtacaat 4452012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 43114754 - 43114677
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| ||||| ||||||||||||   | ||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  43114754 aaaatgagtggtgatacatgtacaccctcatgtggcaatacacctcttacacccacacaaaatcctgacaagtggcaa 43114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 966742 - 966814
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||||||||| ||||||||  ||||||||||||||||| |||||| |||||||    
T  966742 gagtggtgatacatgtacatccccatgtggaaatacacctcttacacccacacaaaatcctgacatgtggcaa 966814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 4299438 - 4299518
Alignment:
Q  177 tgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||||||||||||| ||  |||| ||||| ||||||||| ||||||| ||   |||||||||||| |||||||||    
T  4299438 tgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 38273215 - 38273159
Alignment:
Q  94 tggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggacccc 149  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || |||||||||||    
T  38273215 tggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggacccc 38273159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 7070505 - 7070418
Alignment:
Q  170 gtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||| | ||||||||||| |||||| |||| |||| |||| |  ||||||||| |||| |||  ||||||||||||||||||||||    
T  7070505 gtggttgtaagatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 14285758 - 14285675
Alignment:
Q  177 tgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||||||||||||||||||  ||||| || ||||||||||| ||||||| ||   |||||||||  ||||| ||||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttcct 14285675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 7465808 - 7465746
Alignment:
Q  94 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || ||||||||||||||    
T  7465808 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaa 7465746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 16804160 - 16804088
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   || || || |||||||||  |||||||||||||||||||||||| |||||||    
T  16804160 gagtggtgatacatgtacacccctatatgacaatacacctcttacacccacacaaaattctgacatgtggcaa 16804088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 16843442 - 16843370
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   || || || |||||||||  |||||||||||||||||||||||| |||||||    
T  16843442 gagtggtgatacatgtacacccctatatgacaatacacctcttacacccacacaaaattctgacatgtggcaa 16843370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 17820078 - 17820014
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||  || |||||||||||||||    
T  17820078 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaa 17820014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 29739358 - 29739406
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacac 113  Q
    |||||| |||||||||||||||||  ||||||||||| |||||||||||    
T  29739358 aagagtaatgatacatgtaccatcatatgtggcaatataccctttacac 29739406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 2997561 - 2997498
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  2997561 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 2997498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 28863481 - 28863544
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  28863481 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 28863544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 42257219 - 42257282
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||| | ||| ||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  42257219 gtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaa 42257282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 9058506 - 9058548
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  9058506 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 9058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 4299351 - 4299400
Alignment:
Q  90 catgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||||||| |  ||||||||||||||||| |||||| |||||||    
T  4299351 catgtggcaatacatctcttacacccacacaaaatcctgacatgtggcaa 4299400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 17473047 - 17473088
Alignment:
Q  94 tggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  17473047 tggcaatacaccctttgacacccacacaaaaatctgacacgt 17473088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 27864728 - 27864772
Alignment:
Q  91 atgtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||    
T  27864728 atgtggcaatacaccctttgacatccacacaaaaatctgacacgt 27864772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 147; Significance: 3e-77; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 112850 - 112656
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||    
T  112850 aaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacacgtggcaatctggaccccacacaaatagaaga 112751  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||  ||||||||  |||||||||||||||||||||||    
T  112750 taaagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 18034174 - 18033980
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  18034174 gagtgatgatacatgtaccaccccatatggcaatacaccctttacacccatataaaattctgacacgtggcaacctggaccccacacaaatagaagataa 18034075  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  18034074 agtgtggttgtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcctt 18033980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 2614556 - 2614749
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2614556 agagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 2614655  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  2614656 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 61 - 261
Target Start/End: Complemental strand, 33801667 - 33801467
Alignment:
Q  61 caaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaataga 160  Q
    |||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  33801667 caaatagagtgatgatatatgtaccttcccatgtggcaatacactctttacacccacacaaaattctgacacgtggcaacttggatcccacacaaataga 33801568  T
Q  161 agataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||| ||  |||| ||||||||||||||||||||    
T  33801567 agataaagtgtggttgtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcct 33801468  T
Q  261 t 261  Q
    |    
T  33801467 t 33801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 41334571 - 41334763
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41334571 gagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccacacaaatagaagataa 41334670  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||| |||||| |||  ||||||||||||||||||||||||    
T  41334671 agtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 22512472 - 22512305
Alignment:
Q  92 tgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttacc 191  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  22512472 tgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtggttgtgagatgaacttacc 22512373  T
Q  192 aaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||    
T  22512372 aaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 65 - 262
Target Start/End: Complemental strand, 7617327 - 7617130
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||| ||| |||| | || |||||| |||||||||||    
T  7617327 aagagtgatgatacatgtatcaccccatgtggcaatacaccttttacaccaacacaaaattctgacatgtgacaacttagatcccacataaatagaagat 7617228  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||||||||||||    
T  7617227 aaagtgtggttgtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttccttt 7617130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 66 - 262
Target Start/End: Complemental strand, 5257188 - 5256992
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||||| ||||||||||||    
T  5257188 agagtggtgatacatgtaccaccccatgtggcaatacaccctttacacccacataaaattctgacatgtggcaatcttgaccccacataaatagaagata 5257089  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||  || |||||| |||||||||||| ||||    
T  5257088 aagtgtggttgtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttcttt 5256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 73 - 261
Target Start/End: Complemental strand, 38470765 - 38470577
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||| |||||||||| |||||| ||  ||||||||||| |||||||||||||||||||    
T  38470765 tgatacatgtaccacctcatatggcaatacaccctttacacccacataaaattctgatacgtggtaatctggaccccacataaatagaagataaagtgtg 38470666  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
     || ||| |||||||||||||||||||| ||||||||||||||||||||||  |||| |||  ||||||||| ||||||||||||||||    
T  38470665 attgtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcctt 38470577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 257
Target Start/End: Original strand, 25914902 - 25915085
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25914902 aagagtgatgatacatgtaccacctcatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacctggaccccacacaaatagaagat 25915001  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |        || |||||||||  ||| |||||||  ||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  25915002 a--------ttatgagatgaacctacaaaaatat-tctaatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 39122381 - 39122486
Alignment:
Q  107 tttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaatatccctaata 206  Q
    |||||| |||||||| ||||||||| |||||||| |  ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  39122381 tttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaagataaagtgtagttgtgagatgaatttaccaaaatattcctaata 39122480  T
Q  207 catggg 212  Q
    ||||||    
T  39122481 catggg 39122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 39122261 - 39122369
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    |||||||| |||||||||||||| |||||||| ||||| | | |||||| |||||||| ||||||||| |||||||| |  |||||||||||||||||||    
T  39122261 aaagagtggtgatacatgtaccaccccatgtgacaatatatcatttacatccacacaagattctgacatgtggcaacctaaaccccacacaaatagaaga 39122360  T
Q  164 taaagtgtg 172  Q
    |||||||||    
T  39122361 taaagtgtg 39122369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 33855071 - 33855143
Alignment:
Q  187 ttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33855071 ttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 32473395 - 32473494
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||| ||||||||||||||||||| |||| ||||||||||  |||||| ||   ||||||||||||||||||||||||    
T  32473395 aagagaaagtatggttgtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 17208173 - 17208073
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||| ||| |||| |||||||||||||||   ||||| ||   ||||||||||| ||||||||||||    
T  17208173 aagagaaagtatggttgtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcc 17208074  T
Q  260 t 260  Q
    |    
T  17208073 t 17208073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 30622720 - 30622821
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||| ||||||||||||||||| |||| |||||| | |||||| ||||||| ||   |||| |||||||||||||||||||    
T  30622720 aagagaaagtatggttgtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttcc 30622818  T
Q  260 ttt 262  Q
    |||    
T  30622819 ttt 30622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 28177801 - 28177865
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||  ||||||||||| ||||||    
T  28177801 gtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaa 28177865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 30622627 - 30622699
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||| ||||||||||||   ||||||||||||||||||  |||||||||||||||||| ||||| |||||||    
T  30622627 gagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaattttgacatgtggcaa 30622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 32473303 - 32473374
Alignment:
Q  68 agtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||| ||||||||||||    |||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  32473303 agtggtgatacatgtacacctccatgtggcaatacacctcttacacccacacaaaattctgacatgtggcaa 32473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 6679724 - 6679788
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||  ||||||||||| ||||||    
T  6679724 gtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaa 6679788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 2252242 - 2252179
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  2252242 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 2252179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 3921339 - 3921276
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| |||||    
T  3921339 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaa 3921276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 18520958 - 18520895
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  18520958 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 18520895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 26720542 - 26720605
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||||| |||| ||| |||| ||||||||||||| ||||||| ||| |||||    
T  26720542 gtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaa 26720605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 26990291 - 26990354
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||||||| |||| ||| |||| ||||||||||||| ||||||| ||| |||||    
T  26990291 gtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaa 26990354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 2740300 - 2740342
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  2740300 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 2740342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 42414376 - 42414334
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgt 134  Q
    ||||||||||||||||| |||||||||||||| ||||||||||    
T  42414376 gtggcaatacaccctttgacacccacacaaaaatctgacacgt 42414334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 15409666 - 15409621
Alignment:
Q  110 acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    |||||||||||||| |||||||||| || ||||||||||| |||||    
T  15409666 acacccacacaaaaatctgacacgtagccacatggaccccgcacaa 15409621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 17208263 - 17208194
Alignment:
Q  70 tgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||||||||||||   || ||||| |||||||||  ||||| ||||||||||| |||||| |||||||    
T  17208263 tgatgatacatgtacacccctatgtgacaatacacctcttacatccacacaaaatcctgacatgtggcaa 17208194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 1e-76; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 62 - 259
Target Start/End: Original strand, 5810827 - 5811024
Alignment:
Q  62 aaaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaa 161  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  5810827 aaaaagagtgatgatacatgtaccaccccatgtggcaatacaccctttacacccatacaaaattttgacatgtggcaacttggaccccacacaaatagaa 5810926  T
Q  162 gataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  5810927 gataaagtgtggttgtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 66 - 259
Target Start/End: Original strand, 24000919 - 24001112
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  24000919 agagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagata 24001018  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  24001019 aagtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 42538339 - 42538531
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  42538339 gagtaatgatacatgtaccacctcatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaatctggaccccacacaaatagaagataa 42538438  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  42538439 agtgtggttgtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 32029725 - 32029891
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  32029725 gagtcatgatacatgtaccaccccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataa 32029824  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa 233  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32029825 agtgtggttgttagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaa 32029891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 73 - 262
Target Start/End: Complemental strand, 5015581 - 5015392
Alignment:
Q  73 tgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtg 172  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5015581 tgatacatgtaccaccccatgtggcaatacaccttttacactcacacaaaattctgacacgtggcaacttggaccccacacaaatagaagataaagtgtg 5015482  T
Q  173 gttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||  ||| |||||||||||||||||||||||    
T  5015481 gttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttccttt 5015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 63 - 260
Target Start/End: Complemental strand, 35069917 - 35069720
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||| | ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  35069917 aaaagagtgatgatacatgtaccatcctatgtggcaatatatcctttacatctacacaaaattctgacacgtggcaacttggacctcacataaatagaag 35069818  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||  ||| |||||||||||||||||||||    
T  35069817 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcct 35069720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 66 - 259
Target Start/End: Complemental strand, 42973045 - 42972852
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42973045 agagtaatgatacatgtactatcctatgtggcaatacaccatttacacccacacaaaattctgacacgtggcaacttggaccccacacaaatagaagata 42972946  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    || ||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||  |||| |||||| ||||||||||||    
T  42972945 aaatgtggttgtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 64 - 257
Target Start/End: Original strand, 16180262 - 16180454
Alignment:
Q  64 aaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaaga 163  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16180262 aaagagtgatgatacatgtaccaccccatgtggcaatacaccttttacatccacacaaaattctgacacgtggcaacctggaccccacacaaatagaaga 16180361  T
Q  164 taaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||||| ||||||||||||||||||||||   |||||| ||||||||||||| |||||||||||  || |||||| ||||||||||||    
T  16180362 taaagtgtggttgtgagatgaatttaccaaaatatttataatacgtggggtgtacaat-gggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 44416841 - 44417032
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    ||||||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44416841 agagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagata 44416940  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||  || | |||||||||||||||||    
T  44416941 aagtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 67 - 257
Target Start/End: Original strand, 43343532 - 43343722
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  43343532 gagtgatgatacatgtaccacctcatgtggcaatacaccttttacatccacacaaatttctgacacgtggcaacttggaccccacacaaatagaagataa 43343631  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| ||  || | |||||||||||||||||    
T  43343632 agtgtggttgtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 63 - 257
Target Start/End: Complemental strand, 44326374 - 44326180
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||| ||||||| |    
T  44326374 aaaagagtggtgatacatgtaccacaccatgtggcaatacaccctttacacccacataaaattctgacacgtggcaatctggatcccacataaatagatg 44326275  T
Q  163 ataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  44326274 ataaagtgtggttgtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 256
Target Start/End: Original strand, 26898310 - 26898499
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  26898310 gagtggtgatacatgtaccatcctatgtggcaatacaccttttacacccacataaaattctgacacgtggtaacctggaccccacacaaatagaatataa 26898409  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattt 256  Q
    ||||||||| | ||||||| |||||||||||||||||||||||||  |||||||| ||||||| |||  || ||||||||||||||||||    
T  26898410 agtgtggttgtaagatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 41861868 - 41861672
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  41861868 gagtggtgatacatgtaccactccatgtggcaatacaccctttacacccatacaaaattctgacacgtggcaacctggaccccatacaaatagaagataa 41861769  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccc--taatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||||||| |||||| || ||||||||||||| |  |||||||| ||||||| ||| ||||||| |||  ||||||||||||||||||||||||||    
T  41861768 agtgtggttgtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcctt 41861672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 27393171 - 27393344
Alignment:
Q  70 tgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagt 169  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||| | |||||| ||||||||||| ||||||||||||||||    
T  27393171 tgatgatacatgtaccaccccatgtggcaatacatcctttacacccacataaaattctgacatgaggcaacctggaccccacataaatagaagataaagt 27393270  T
Q  170 gtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgt 243  Q
    |||||| ||||||||| |||| |||||||||||||||||| | ||||||||| || ||||||||  ||||||||    
T  27393271 gtggttgtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 38160508 - 38160649
Alignment:
Q  88 cccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatt 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||| |    
T  38160508 cccatgtggcaatacaccccttacacccacacaaaattctgacacgtggcaacttggaccccacataaatagaagataaagtgtagttgtgagatgaagt 38160607  T
Q  188 taccaaaatatccctaatacatggggtgtacaatggggtgta 229  Q
    ||| |||||||||||||||||||||||||||||||| |||||    
T  38160608 tactaaaatatccctaatacatggggtgtacaatggagtgta 38160649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 67 - 257
Target Start/End: Complemental strand, 10573941 - 10573751
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||| |||||||||||||| | |||||| ||||| | |||||||||||||| |||||||||| | |||||||  | ||||||||| |||||||||||||    
T  10573941 gagtggtgatacatgtaccaccgcatgtgacaatatatcctttacacccacataaaattctgatatgtggcaatcttgaccccacataaatagaagataa 10573842  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||| |||  ||||||||| ||||||||||||    
T  10573841 agtgtggttgtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 4638106 - 4638297
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagata 165  Q
    |||||| |||||||||||||| || | ||| |||||||||||||||| ||| |||| |||||||||||||| ||| | ||||||||||||||||||||||    
T  4638106 agagtggtgatacatgtaccaccctacgtgacaatacaccctttacatccatacaagattctgacacgtggtaacctagaccccacacaaatagaagata 4638205  T
Q  166 aagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||| | ||||| |||  || |||||||||||||||||||    
T  4638206 aagtatggttgtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 65 - 259
Target Start/End: Complemental strand, 45326214 - 45326020
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||||| |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||| |||| |   ||||||||||| |||||||||||    
T  45326214 aagagtggtgatacatgtaccaccccatgtgacaatacaccatttacacccacataaaattctgacaggtggtagtctggaccccacataaatagaagat 45326115  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||| | |||| |||  || |||||| |||||||| |||||    
T  45326114 aaagtgtgattgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 65 - 260
Target Start/End: Complemental strand, 9216495 - 9216301
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagat 164  Q
    ||||| ||||||| || ||||| |||||||| ||||||||| |||||| |||||||||||||||||| | |||||| |  ||||||||||||||||||||    
T  9216495 aagagggatgatatatataccaccccatgtgacaatacaccttttacatccacacaaaattctgacatgcggcaacttaaaccccacacaaatagaagat 9216396  T
Q  165 aaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||| ||||||| ||||||||| ||||||||||||| ||||| ||| ||||||||||| || | ||||||  |||||||||||||||||||||||||    
T  9216395 aaaatgtggttgtgagatgaacttaccaaaatatctctaatgcat-gggtgtacaataggatataggaataaagggtgttcatgtaacattttcct 9216301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 92 - 260
Target Start/End: Complemental strand, 43317610 - 43317442
Alignment:
Q  92 tgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttacc 191  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||||||  ||||||| || ||||||||||||| |    
T  43317610 tgtggcaatacaccccttacacccacacaaaattctgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatc 43317511  T
Q  192 aaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |||||||||||||  ||| || ||||||||| |||||| |||  || ||||||||||||||||||||||    
T  43317510 aaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 43317442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 92 - 260
Target Start/End: Original strand, 5194164 - 5194332
Alignment:
Q  92 tgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttacc 191  Q
    |||||||||||| || |||||||||||||||||| ||||| |||||||  | ||||||||||||||||||||  ||||||| || ||||||||||||| |    
T  5194164 tgtggcaatacaacccttacacccacacaaaattttgacatgtggcaatctagaccccacacaaatagaagagtaagtgtgattgtgagatgaatttatc 5194263  T
Q  192 aaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||| ||| |||| |||||||||||| |||||| |||  || ||||||||||||||||||||||    
T  5194264 aaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcct 5194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 98 - 260
Target Start/End: Original strand, 24280535 - 24280697
Alignment:
Q  98 aatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataaagtgtggttttgagatgaatttaccaaaata 197  Q
    ||||||||  |||||| | ||||||||||||| |  ||||||| |||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  24280535 aatacacctcttacactcgcacaaaattctgatatatggcaacttggaccccacacaaatagaagagaaagtgtgattgtgagatgaatttaccaaaata 24280634  T
Q  198 tccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    |  ||| | |||||| |||| ||| ||||||| |||  ||||||||||| |||||||||||||    
T  24280635 tttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcct 24280697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 175
Target Start/End: Original strand, 47279628 - 47279740
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaag 162  Q
    ||||||||| |||||||||||||||||||| || |||||||||||||| ||||||| |||||||||| | |||| ||  |||| || | | |||||||||    
T  47279628 aaaagagtggtgatacatgtaccatcccatctgacaatacaccctttatacccacataaaattctgatatgtggtaatctggatcctatataaatagaag 47279727  T
Q  163 ataaagtgtggtt 175  Q
    |||||||||||||    
T  47279728 ataaagtgtggtt 47279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 31513386 - 31513287
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||| |||||||| |||||| ||||||| ||   ||| ||||||||||||||||||||    
T  31513386 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 40237007 - 40236916
Alignment:
Q  171 tggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttccttt 262  Q
    ||||| ||||||||| |||||||||| |||||||| ||||||||||||||| || |||| ||   |||||||||||||||||||||||||||    
T  40237007 tggttgtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttccttt 40236916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 31408634 - 31408732
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    |||| ||||| ||||| ||| |||||||||||||||||||| |||| |||||| |||||||| | ||||| ||   |||||||||||||||||||||||    
T  31408634 aagagaaagtatggttgtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 40237112 - 40237039
Alignment:
Q  66 agagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    |||||| ||||||||||||   ||||||||||||||||||  ||||||||||||||||| |||||| |||||||    
T  40237112 agagtggtgatacatgtacacccccatgtggcaatacacctcttacacccacacaaaatcctgacatgtggcaa 40237039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 33384970 - 33384867
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaat-ggggtgtaggaaataagggtgttcatgtaacattttc 258  Q
    |||| ||||| || || |||||||||||||||||||| |||||||| ||||| || |||||| |||||||| ||   || | ||||||||||||||||||    
T  33384970 aagagaaagtatgtttgtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttc 33384871  T
Q  259 cttt 262  Q
    ||||    
T  33384870 cttt 33384867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 46374876 - 46374813
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||||| |||||    
T  46374876 gtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaa 46374813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 27535232 - 27535334
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| | ||| ||||||||| |||||||||| ||  ||| |||||| ||||||||| | ||||| ||   ||||||||||||||||||||||||    
T  27535232 aagagaaagtatagttgtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 27535331  T
Q  260 ttt 262  Q
    |||    
T  27535332 ttt 27535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 139
Target Start/End: Original strand, 31408537 - 31408613
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||| ||||||||||||   |||||||| |||||||||  ||||||||||| ||||| |||||| |||||||    
T  31408537 aaaagagtggtgatacatgtacacccccatgtgacaatacacctcttacacccacataaaatcctgacatgtggcaa 31408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 39998475 - 39998408
Alignment:
Q  192 aaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||||||||||||||||||||||||||| || |||| ||   ||  ||||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 32564500 - 32564434
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaata 158  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||| | ||||||||| ||||||||    
T  32564500 gtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaata 32564434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 35522902 - 35522965
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||| | ||||| ||| |||||    
T  35522902 gtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaa 35522965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 36361987 - 36361924
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||||||||| ||||| |||||||||||||| |||||||||| |  || ||||||||||||||    
T  36361987 gtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaa 36361924  T

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Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 139
Target Start/End: Original strand, 27535161 - 27535211
Alignment:
Q  89 ccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||||||||| |  ||||| |||||||||||||||||| |||||||    
T  27535161 ccatgtggcaatacatctcttacatccacacaaaattctgacatgtggcaa 27535211  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 38267064 - 38267129
Alignment:
Q  91 atgtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaa 155  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  38267064 atgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaa 38267129  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 31513483 - 31513407
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||| ||||||||||||   |  |||||||||||||||  ||||| | ||||||||| |||||| |||||||    
T  31513483 aaaagagtggtgatacatgtacacccttatgtggcaatacacctcttacatctacacaaaatcctgacatgtggcaa 31513407  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 33385067 - 33384991
Alignment:
Q  63 aaaagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||||| |||||||||||    |||||||| |||||||||  ||||||||| ||||||| |||| | |||||||    
T  33385067 aaaagagtggtgatacatgtaaacccccatgtgacaatacacctcttacacccatacaaaatcctgatatgtggcaa 33384991  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 35137559 - 35137623
Alignment:
Q  93 gtggcaatacacccttt-acacccacacaaaattctgacacgtggcaacatggaccccacacaaa 156  Q
    ||||||||||||||||| |||||||||||||| ||| |||||| |  || |||||||| ||||||    
T  35137559 gtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaa 35137623  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 46033875 - 46033831
Alignment:
Q  93 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 136  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||    
T  46033875 gtggcaatacaccctttaacacccacataaaaatctgacacgtgg 46033831  T

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Target: scaffold0187 (Bit Score: 142; Significance: 3e-74; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 67 - 260
Target Start/End: Original strand, 14097 - 14289
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  14097 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccc-acacaaatagaagataa 14195  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  14196 agtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 14289  T

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Target: scaffold0187; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 67 - 260
Target Start/End: Original strand, 24425 - 24617
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  24425 gagtgatgatacatgtaccaccccatgtggcaatacaccctttacatccacacaaaattctgacacgtggcaacctggaccc-acacaaatagaagataa 24523  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcct 260  Q
    ||||||||| ||||||||| |||| |||||||||||||||||| || ||||||||||||||||| ||  |||||||||||||||||||||||||    
T  24524 agtgtggttgtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 24617  T

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Target: scaffold0385 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 67 - 261
Target Start/End: Complemental strand, 11443 - 11249
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||| |||||||||||  ||||||||||||    
T  11443 gagtgatgatacatgtaccatcccatgtggcaatacactatttacacctacacaaaattctgacacgtagcaacttggaccccacatcaatagaagataa 11344  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcctt 261  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||  ||| |||||||||| |||||||||||    
T  11343 agtgtggttgtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcctt 11249  T

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Target: scaffold0157 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 67 - 259
Target Start/End: Original strand, 23329 - 23521
Alignment:
Q  67 gagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaacatggaccccacacaaatagaagataa 166  Q
    |||| |||||||||| |||| |||||||| ||||||||  ||||||||||||||||||||| |||||||||||  || ||| ||||||||||||||||||    
T  23329 gagtaatgatacatgcaccaccccatgtgacaatacacgttttacacccacacaaaattctaacacgtggcaaattgaacctcacacaaatagaagataa 23428  T
Q  167 agtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||||| || | ||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||  |||||||||||| |||||||||||    
T  23429 agtgtgattgtaagatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

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Target: scaffold0003 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 45720 - 45817
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacatttt 257  Q
    |||| ||||| ||||| |||||||||||||||||||||||| |||||||| || |||||||| ||||||| ||   ||||||||||||||||||||||    
T  45720 aagagaaagtatggttgtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 45625 - 45699
Alignment:
Q  65 aagagtgatgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaattctgacacgtggcaa 139  Q
    ||||||| ||||||||||||   ||||||||||||||||||  ||||||||||| ||||| |||||| |||||||    
T  45625 aagagtggtgatacatgtacacacccatgtggcaatacacctcttacacccacataaaatcctgacatgtggcaa 45699  T

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Target: scaffold0100 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 35457 - 35556
Alignment:
Q  160 aagataaagtgtggttttgagatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaaataagggtgttcatgtaacattttcc 259  Q
    |||| ||||| ||||| ||||||||||||||||| || |||||||| |||||||||||||||  |||||| ||   || |||||| ||||||||||||||    
T  35457 aagagaaagtatggttgtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

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Target: scaffold0100; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 35369 - 35421
Alignment:
Q  72 atgatacatgtaccatcccatgtggcaatacaccctttacacccacacaaaat 124  Q
    |||||||||||||   ||||||||||||||||||  ||||||||| |||||||    
T  35369 atgatacatgtacacccccatgtggcaatacacctcttacacccatacaaaat 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 1640 - 1611
Alignment:
Q  460 atttcgtgtgttctctctttcttttctctc 489  Q
    ||||||||||||||||||||||||||||||    
T  1640 atttcgtgtgttctctctttcttttctctc 1611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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