View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1532_low_97 (Length: 275)

Name: NF1532_low_97
Description: NF1532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1532_low_97
NF1532_low_97
[»] chr4 (102 HSPs)
chr4 (1-263)||(5664571-5664836)
chr4 (1-152)||(18534680-18534829)
chr4 (9-149)||(18537325-18537463)
chr4 (22-150)||(12102440-12102567)
chr4 (55-150)||(19323083-19323178)
chr4 (21-156)||(18409185-18409322)
chr4 (1-149)||(38890072-38890222)
chr4 (5-149)||(8756103-8756244)
chr4 (18-150)||(38928023-38928158)
chr4 (1-142)||(15032401-15032544)
chr4 (6-150)||(2891633-2891781)
chr4 (9-149)||(41997835-41997975)
chr4 (18-149)||(16453662-16453796)
chr4 (18-149)||(36378645-36378777)
chr4 (6-147)||(30136891-30137031)
chr4 (32-149)||(53405508-53405626)
chr4 (22-152)||(47563117-47563251)
chr4 (24-151)||(14787272-14787402)
chr4 (30-149)||(22802577-22802699)
chr4 (23-149)||(16455585-16455714)
chr4 (24-149)||(14789273-14789401)
chr4 (22-150)||(56030818-56030946)
chr4 (29-149)||(2484715-2484834)
chr4 (6-149)||(3937126-3937266)
chr4 (29-151)||(26085816-26085938)
chr4 (23-149)||(49088915-49089044)
chr4 (29-154)||(5635313-5635437)
chr4 (29-149)||(6765216-6765335)
chr4 (24-149)||(27499408-27499536)
chr4 (24-148)||(6133197-6133326)
chr4 (29-149)||(24348573-24348692)
chr4 (18-149)||(33415334-33415469)
chr4 (32-149)||(36380716-36380834)
chr4 (62-149)||(5198809-5198895)
chr4 (29-149)||(18709003-18709124)
chr4 (18-149)||(24446502-24446635)
chr4 (62-149)||(31849440-31849526)
chr4 (1-149)||(28454019-28454167)
chr4 (6-143)||(36919435-36919576)
chr4 (16-149)||(4215655-4215792)
chr4 (30-149)||(24889164-24889286)
chr4 (29-149)||(37089212-37089333)
chr4 (21-150)||(37312923-37313055)
chr4 (65-149)||(9173987-9174070)
chr4 (1-149)||(16185686-16185832)
chr4 (62-149)||(8631260-8631346)
chr4 (62-149)||(9176315-9176401)
chr4 (6-149)||(17662092-17662237)
chr4 (18-149)||(36921338-36921474)
chr4 (24-149)||(5101276-5101404)
chr4 (34-149)||(40091259-40091378)
chr4 (62-149)||(11006094-11006181)
chr4 (62-149)||(11008408-11008495)
chr4 (28-149)||(22046526-22046648)
chr4 (6-149)||(22800705-22800854)
chr4 (62-149)||(7941728-7941814)
chr4 (6-114)||(40637415-40637530)
chr4 (29-150)||(9148607-9148728)
chr4 (29-149)||(22782577-22782698)
chr4 (1-151)||(9864048-9864198)
chr4 (29-149)||(16931631-16931751)
chr4 (73-142)||(40998877-40998946)
chr4 (29-114)||(51015617-51015702)
chr4 (6-94)||(24879331-24879424)
chr4 (29-143)||(14633690-14633804)
chr4 (69-149)||(10113272-10113351)
chr4 (29-149)||(11437734-11437855)
chr4 (6-128)||(12395712-12395837)
chr4 (6-128)||(12400674-12400799)
chr4 (29-149)||(22780212-22780333)
chr4 (29-150)||(38409576-38409697)
chr4 (34-149)||(3824447-3824569)
chr4 (29-114)||(22044267-22044352)
chr4 (31-132)||(47210655-47210755)
chr4 (4-149)||(52043412-52043555)
chr4 (31-133)||(11435328-11435430)
chr4 (16-150)||(19096238-19096371)
chr4 (30-133)||(52942347-52942453)
chr4 (1-149)||(47150742-47150890)
chr4 (29-149)||(47868773-47868894)
chr4 (22-146)||(3982032-3982154)
chr4 (6-149)||(13547495-13547643)
chr4 (62-131)||(22134476-22134544)
chr4 (29-149)||(44599680-44599799)
chr4 (22-151)||(47275082-47275214)
chr4 (30-143)||(48486687-48486803)
chr4 (62-133)||(18847558-18847627)
chr4 (1-149)||(10114653-10114798)
chr4 (62-131)||(22132248-22132317)
chr4 (1-133)||(29609362-29609490)
chr4 (73-133)||(47078686-47078744)
chr4 (95-156)||(18311208-18311271)
chr4 (73-147)||(5516090-5516162)
chr4 (6-94)||(24880793-24880888)
chr4 (78-149)||(31983383-31983454)
chr4 (22-92)||(3578586-3578655)
chr4 (73-149)||(38269995-38270071)
chr4 (22-147)||(25357998-25358122)
chr4 (78-147)||(9022698-9022765)
chr4 (81-146)||(54928548-54928611)
chr4 (78-149)||(22295576-22295646)
chr4 (6-141)||(619306-619440)
[»] chr8 (56 HSPs)
chr8 (1-149)||(2467979-2468127)
chr8 (1-147)||(31162550-31162697)
chr8 (6-149)||(13858334-13858477)
chr8 (1-149)||(21482648-21482798)
chr8 (2-149)||(21480841-21480990)
chr8 (55-149)||(3005486-3005579)
chr8 (18-149)||(15956312-15956443)
chr8 (6-149)||(25952864-25953010)
chr8 (8-149)||(15185564-15185704)
chr8 (22-142)||(27106754-27106874)
chr8 (22-135)||(36865899-36866014)
chr8 (6-149)||(28251410-28251559)
chr8 (24-133)||(14808123-14808234)
chr8 (18-149)||(15073065-15073202)
chr8 (29-149)||(27827359-27827479)
chr8 (29-133)||(43082347-43082450)
chr8 (62-149)||(27829703-27829790)
chr8 (18-149)||(35872301-35872434)
chr8 (29-149)||(4424392-4424512)
chr8 (24-149)||(14419035-14419163)
chr8 (29-149)||(28283062-28283182)
chr8 (65-149)||(15809628-15809711)
chr8 (6-149)||(33541255-33541402)
chr8 (29-149)||(24873039-24873161)
chr8 (29-149)||(3874367-3874487)
chr8 (65-149)||(14477655-14477740)
chr8 (24-134)||(30480364-30480476)
chr8 (24-149)||(37214109-37214237)
chr8 (18-149)||(15068335-15068472)
chr8 (6-149)||(41383005-41383154)
chr8 (29-133)||(43079976-43080079)
chr8 (29-151)||(3883434-3883556)
chr8 (31-149)||(43530491-43530609)
chr8 (24-149)||(27911441-27911567)
chr8 (24-149)||(27957860-27957986)
chr8 (62-149)||(32339716-32339803)
chr8 (29-149)||(609109-609230)
chr8 (33-149)||(18811085-18811202)
chr8 (29-131)||(44721217-44721318)
chr8 (18-84)||(181833-181901)
chr8 (78-154)||(31578128-31578202)
chr8 (18-131)||(1225521-1225626)
chr8 (100-151)||(31035553-31035604)
chr8 (33-149)||(18813259-18813376)
chr8 (29-149)||(22684491-22684614)
chr8 (78-149)||(16833954-16834024)
chr8 (97-149)||(2467781-2467833)
chr8 (97-149)||(2467880-2467932)
chr8 (22-133)||(5372043-5372157)
chr8 (30-149)||(41385114-41385233)
chr8 (73-149)||(13984934-13985008)
chr8 (97-149)||(6376481-6376533)
chr8 (100-135)||(3898936-3898971)
chr8 (96-149)||(183256-183310)
chr8 (73-149)||(17847927-17848002)
chr8 (81-148)||(31566411-31566476)
[»] chr1 (90 HSPs)
chr1 (1-146)||(18800426-18800571)
chr1 (24-149)||(14183455-14183579)
chr1 (18-149)||(16429256-16429387)
chr1 (42-150)||(30790249-30790357)
chr1 (9-149)||(15916681-15916821)
chr1 (6-149)||(17185979-17186121)
chr1 (5-149)||(8348905-8349046)
chr1 (6-149)||(15669246-15669386)
chr1 (34-149)||(39932398-39932514)
chr1 (21-149)||(40134247-40134378)
chr1 (24-149)||(50078635-50078764)
chr1 (29-149)||(9459277-9459397)
chr1 (29-149)||(9463104-9463224)
chr1 (6-149)||(2949079-2949226)
chr1 (29-149)||(28842812-28842931)
chr1 (6-149)||(50248417-50248564)
chr1 (18-109)||(16428952-16429043)
chr1 (6-147)||(25251123-25251268)
chr1 (32-149)||(3579431-3579550)
chr1 (50-145)||(26519293-26519385)
chr1 (8-146)||(9240937-9241077)
chr1 (29-149)||(16226486-16226607)
chr1 (18-150)||(6114952-6115085)
chr1 (17-149)||(23816186-23816323)
chr1 (29-149)||(13447117-13447236)
chr1 (24-149)||(4131221-4131350)
chr1 (24-151)||(17319193-17319323)
chr1 (29-149)||(16231881-16232002)
chr1 (29-149)||(13358891-13359011)
chr1 (6-149)||(28206912-28207062)
chr1 (8-151)||(13215373-13215520)
chr1 (29-149)||(15294678-15294797)
chr1 (34-141)||(16432705-16432813)
chr1 (18-149)||(47906568-47906704)
chr1 (29-149)||(51750357-51750476)
chr1 (18-149)||(38925328-38925464)
chr1 (24-149)||(18839894-18840022)
chr1 (29-114)||(28840997-28841082)
chr1 (1-133)||(8347143-8347271)
chr1 (1-133)||(13125327-13125456)
chr1 (18-149)||(28998094-28998231)
chr1 (18-149)||(29003810-29003947)
chr1 (30-149)||(6995540-6995662)
chr1 (24-143)||(11457328-11457450)
chr1 (33-149)||(30780361-30780482)
chr1 (6-149)||(14097815-14097963)
chr1 (6-150)||(18307396-18307544)
chr1 (24-149)||(25248398-25248526)
chr1 (6-149)||(27336782-27336934)
chr1 (6-149)||(50307389-50307539)
chr1 (29-150)||(13762154-13762276)
chr1 (65-149)||(51752723-51752805)
chr1 (62-149)||(51757886-51757973)
chr1 (62-151)||(23786191-23786280)
chr1 (6-150)||(39462806-39462957)
chr1 (20-149)||(47451930-47452065)
chr1 (29-150)||(10399668-10399791)
chr1 (24-133)||(12302368-12302480)
chr1 (32-114)||(17324388-17324472)
chr1 (29-149)||(20291774-20291894)
chr1 (6-149)||(27338973-27339125)
chr1 (24-149)||(31424862-31424990)
chr1 (32-149)||(31490226-31490345)
chr1 (29-149)||(46431548-46431668)
chr1 (30-149)||(2617836-2617955)
chr1 (62-149)||(31735365-31735452)
chr1 (78-147)||(16561825-16561892)
chr1 (21-122)||(26332392-26332490)
chr1 (29-149)||(20302759-20302879)
chr1 (6-149)||(41647207-41647355)
chr1 (62-149)||(24326014-24326101)
chr1 (6-107)||(50076563-50076666)
chr1 (95-149)||(28279641-28279695)
chr1 (24-149)||(31422706-31422835)
chr1 (29-149)||(47177680-47177801)
chr1 (22-114)||(25128179-25128271)
chr1 (77-149)||(26613094-26613164)
chr1 (68-150)||(10116120-10116200)
chr1 (30-133)||(15823861-15823967)
chr1 (62-149)||(2510184-2510272)
chr1 (18-145)||(17324482-17324614)
chr1 (5-101)||(42922517-42922608)
chr1 (29-149)||(47180031-47180152)
chr1 (73-149)||(13433508-13433582)
chr1 (30-149)||(25860252-25860371)
chr1 (3-59)||(26520061-26520117)
chr1 (80-151)||(43104548-43104617)
chr1 (1-115)||(13127575-13127686)
chr1 (108-154)||(13426792-13426838)
chr1 (18-133)||(155984-156095)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-149)||(1493-1639)
[»] chr5 (73 HSPs)
chr5 (1-148)||(6661038-6661182)
chr5 (6-149)||(20054124-20054266)
chr5 (29-149)||(10587133-10587252)
chr5 (29-152)||(18469327-18469451)
chr5 (29-149)||(18467002-18467123)
chr5 (24-149)||(41585580-41585708)
chr5 (6-149)||(9020507-9020649)
chr5 (22-149)||(36208877-36209007)
chr5 (28-149)||(38959972-38960093)
chr5 (24-145)||(17818338-17818463)
chr5 (29-147)||(27912854-27912973)
chr5 (29-149)||(39798348-39798468)
chr5 (23-143)||(21289064-21289187)
chr5 (29-149)||(38882406-38882525)
chr5 (6-149)||(1189454-1189599)
chr5 (18-149)||(658204-658337)
chr5 (29-150)||(4236946-4237066)
chr5 (32-149)||(4410343-4410458)
chr5 (16-114)||(20045284-20045384)
chr5 (21-149)||(20505687-20505821)
chr5 (24-114)||(26098167-26098259)
chr5 (29-149)||(27910751-27910872)
chr5 (24-148)||(12555757-12555886)
chr5 (6-114)||(20043277-20043388)
chr5 (24-149)||(37705626-37705755)
chr5 (1-150)||(15445119-15445264)
chr5 (32-150)||(34530558-34530679)
chr5 (29-149)||(34476894-34477014)
chr5 (24-149)||(40221835-40221963)
chr5 (29-149)||(21684294-21684413)
chr5 (6-150)||(696165-696311)
chr5 (21-133)||(2724196-2724310)
chr5 (36-153)||(31179209-31179326)
chr5 (29-131)||(31543052-31543153)
chr5 (24-148)||(6756798-6756926)
chr5 (6-150)||(10474167-10474315)
chr5 (6-149)||(24127143-24127291)
chr5 (18-142)||(18596945-18597072)
chr5 (29-149)||(25921315-25921434)
chr5 (29-141)||(25804342-25804455)
chr5 (24-149)||(31465833-31465962)
chr5 (29-149)||(2175219-2175341)
chr5 (6-150)||(2818178-2818327)
chr5 (29-149)||(10750017-10750137)
chr5 (29-149)||(10757493-10757613)
chr5 (30-149)||(17073199-17073321)
chr5 (29-149)||(34479259-34479379)
chr5 (6-149)||(36402170-36402320)
chr5 (18-149)||(2954714-2954849)
chr5 (18-149)||(18511056-18511193)
chr5 (34-150)||(15552569-15552686)
chr5 (29-149)||(3372977-3373098)
chr5 (30-133)||(16776473-16776577)
chr5 (24-143)||(21948338-21948462)
chr5 (6-112)||(25904390-25904499)
chr5 (6-112)||(26098018-26098127)
chr5 (1-113)||(42771059-42771167)
chr5 (29-149)||(10528937-10529059)
chr5 (5-133)||(2144438-2144562)
chr5 (18-149)||(6745367-6745507)
chr5 (18-149)||(6747603-6747743)
chr5 (18-111)||(18509201-18509299)
chr5 (30-149)||(39854798-39854921)
chr5 (29-131)||(31545401-31545502)
chr5 (62-149)||(15354414-15354502)
chr5 (62-149)||(15356690-15356778)
chr5 (62-149)||(23665396-23665484)
chr5 (62-149)||(23741697-23741785)
chr5 (62-149)||(23793103-23793191)
chr5 (24-150)||(16092044-16092172)
chr5 (104-149)||(35314788-35314833)
chr5 (18-149)||(31472458-31472590)
chr5 (78-149)||(15143826-15143896)
[»] chr7 (76 HSPs)
chr7 (7-149)||(24465832-24465975)
chr7 (16-149)||(7188845-7188979)
chr7 (6-150)||(22394020-22394162)
chr7 (22-149)||(24748907-24749035)
chr7 (22-149)||(27832488-27832616)
chr7 (29-149)||(9027034-9027154)
chr7 (18-149)||(31434892-31435027)
chr7 (2-119)||(20091036-20091153)
chr7 (18-149)||(21678372-21678506)
chr7 (18-149)||(21680338-21680472)
chr7 (18-149)||(37411965-37412101)
chr7 (5-149)||(24813348-24813491)
chr7 (6-149)||(13099317-13099466)
chr7 (22-149)||(26295758-26295885)
chr7 (29-149)||(7351491-7351612)
chr7 (8-118)||(6349097-6349205)
chr7 (24-149)||(443914-444044)
chr7 (29-149)||(20297690-20297810)
chr7 (30-150)||(20626362-20626482)
chr7 (30-150)||(20630253-20630373)
chr7 (30-150)||(20642672-20642792)
chr7 (29-149)||(38394314-38394434)
chr7 (24-149)||(42330846-42330974)
chr7 (22-149)||(44724891-44725022)
chr7 (29-149)||(48457981-48458100)
chr7 (30-151)||(20299789-20299910)
chr7 (1-142)||(24817210-24817350)
chr7 (29-149)||(11759455-11759575)
chr7 (18-142)||(4295788-4295915)
chr7 (24-149)||(11355575-11355705)
chr7 (29-152)||(25542856-25542979)
chr7 (6-114)||(39145867-39145978)
chr7 (62-149)||(43253358-43253444)
chr7 (29-150)||(1606707-1606828)
chr7 (31-132)||(35959-36059)
chr7 (29-149)||(7471821-7471941)
chr7 (18-150)||(27306075-27306213)
chr7 (29-149)||(28485893-28486013)
chr7 (29-149)||(7094301-7094421)
chr7 (29-148)||(28487881-28488000)
chr7 (65-149)||(40946694-40946777)
chr7 (62-149)||(2935630-2935716)
chr7 (29-147)||(3036052-3036170)
chr7 (29-149)||(7349117-7349237)
chr7 (29-149)||(44892-45012)
chr7 (24-140)||(9679375-9679495)
chr7 (66-143)||(38397004-38397080)
chr7 (62-142)||(7092061-7092141)
chr7 (18-149)||(26804818-26804955)
chr7 (29-133)||(40836601-40836704)
chr7 (18-149)||(42223466-42223600)
chr7 (30-132)||(1850310-1850411)
chr7 (29-114)||(18345869-18345954)
chr7 (24-114)||(21592025-21592116)
chr7 (6-114)||(21990447-21990559)
chr7 (32-128)||(22251452-22251550)
chr7 (42-149)||(1049129-1049239)
chr7 (34-149)||(3878911-3879027)
chr7 (29-149)||(7469864-7469983)
chr7 (6-149)||(9681117-9681265)
chr7 (81-149)||(1502816-1502883)
chr7 (78-149)||(6049241-6049310)
chr7 (42-133)||(1046775-1046868)
chr7 (62-150)||(22137439-22137528)
chr7 (62-150)||(40552466-40552555)
chr7 (62-149)||(40550189-40550277)
chr7 (97-150)||(2990481-2990533)
chr7 (76-149)||(20136991-20137066)
chr7 (29-79)||(31155839-31155889)
chr7 (100-149)||(16104631-16104680)
chr7 (22-91)||(16296932-16297000)
chr7 (62-114)||(22108429-22108482)
chr7 (73-149)||(26214729-26214803)
chr7 (97-149)||(2075384-2075436)
chr7 (76-147)||(11081877-11081946)
chr7 (101-148)||(40281236-40281284)
[»] chr2 (60 HSPs)
chr2 (6-149)||(28459038-28459182)
chr2 (1-151)||(20592336-20592486)
chr2 (1-149)||(11577957-11578105)
chr2 (24-149)||(19007922-19008051)
chr2 (2-149)||(31732631-31732774)
chr2 (21-149)||(3022451-3022582)
chr2 (36-149)||(19504178-19504291)
chr2 (6-149)||(14837531-14837679)
chr2 (1-149)||(17897099-17897243)
chr2 (34-149)||(19501843-19501958)
chr2 (6-149)||(17849380-17849528)
chr2 (1-149)||(37962791-37962939)
chr2 (18-154)||(22162864-22163003)
chr2 (55-149)||(22874424-22874519)
chr2 (16-147)||(38020354-38020488)
chr2 (6-149)||(6263993-6264140)
chr2 (6-145)||(6258666-6258809)
chr2 (62-149)||(36560981-36561068)
chr2 (29-143)||(27105091-27105206)
chr2 (62-149)||(42453804-42453890)
chr2 (29-143)||(45279848-45279962)
chr2 (24-149)||(28196917-28197045)
chr2 (62-150)||(36558720-36558808)
chr2 (30-149)||(21520534-21520657)
chr2 (6-149)||(22287181-22287328)
chr2 (24-149)||(13828177-13828300)
chr2 (6-150)||(15539369-15539521)
chr2 (29-143)||(23452084-23452198)
chr2 (6-149)||(22707595-22707743)
chr2 (24-149)||(42923351-42923480)
chr2 (30-114)||(7462826-7462912)
chr2 (29-152)||(13909881-13910006)
chr2 (24-146)||(34979437-34979562)
chr2 (6-103)||(22407346-22407446)
chr2 (18-149)||(45238842-45238978)
chr2 (18-114)||(17848714-17848813)
chr2 (29-149)||(24162063-24162184)
chr2 (82-147)||(35107635-35107699)
chr2 (18-149)||(43623423-43623561)
chr2 (1-149)||(20146459-20146605)
chr2 (29-133)||(35217827-35217930)
chr2 (78-148)||(40699709-40699777)
chr2 (71-149)||(45332020-45332098)
chr2 (76-149)||(34574990-34575061)
chr2 (65-149)||(11739421-11739506)
chr2 (24-149)||(38414028-38414155)
chr2 (29-114)||(42064792-42064877)
chr2 (62-114)||(5375226-5375278)
chr2 (76-147)||(15697376-15697445)
chr2 (78-149)||(33604255-33604324)
chr2 (71-133)||(35215450-35215511)
chr2 (78-149)||(7503125-7503194)
chr2 (1-149)||(8173588-8173733)
chr2 (76-130)||(39287423-39287475)
chr2 (73-142)||(35028900-35028967)
chr2 (73-149)||(41304359-41304433)
chr2 (81-133)||(43482720-43482770)
chr2 (100-132)||(10942379-10942411)
chr2 (100-132)||(10948248-10948280)
chr2 (73-148)||(41302887-41302960)
[»] chr3 (92 HSPs)
chr3 (7-140)||(561633-561764)
chr3 (6-149)||(17795526-17795669)
chr3 (6-149)||(19103966-19104109)
chr3 (24-154)||(41849346-41849475)
chr3 (49-149)||(31151654-31151754)
chr3 (29-149)||(456206-456325)
chr3 (29-149)||(458583-458702)
chr3 (6-149)||(23633720-23633862)
chr3 (29-149)||(42990597-42990717)
chr3 (18-134)||(27635514-27635632)
chr3 (18-133)||(880313-880430)
chr3 (21-150)||(28761286-28761415)
chr3 (18-143)||(880090-880219)
chr3 (18-151)||(1313687-1313824)
chr3 (30-152)||(747057-747180)
chr3 (29-149)||(10955867-10955986)
chr3 (6-149)||(32219352-32219503)
chr3 (1-149)||(25635643-25635788)
chr3 (29-149)||(1321777-1321897)
chr3 (29-149)||(10958163-10958282)
chr3 (6-149)||(32263881-32264028)
chr3 (6-149)||(12267819-12267965)
chr3 (69-160)||(24181669-24181760)
chr3 (18-149)||(43421260-43421394)
chr3 (18-149)||(43423308-43423442)
chr3 (55-149)||(42992705-42992799)
chr3 (31-143)||(5191951-5192062)
chr3 (29-149)||(10621366-10621488)
chr3 (34-149)||(22114143-22114258)
chr3 (28-112)||(26720844-26720928)
chr3 (6-149)||(4308122-4308271)
chr3 (29-149)||(6065633-6065754)
chr3 (6-151)||(36012094-36012245)
chr3 (62-155)||(53893887-53893980)
chr3 (6-149)||(3314952-3315100)
chr3 (29-149)||(5522466-5522586)
chr3 (29-154)||(10084224-10084348)
chr3 (29-149)||(11168399-11168519)
chr3 (24-149)||(15781165-15781293)
chr3 (18-151)||(45883223-45883359)
chr3 (6-134)||(1626542-1626673)
chr3 (18-149)||(53917506-53917643)
chr3 (6-149)||(24979975-24980126)
chr3 (6-150)||(27101021-27101171)
chr3 (1-149)||(36871149-36871296)
chr3 (29-151)||(50494297-50494419)
chr3 (18-114)||(51943653-51943751)
chr3 (1-149)||(53597499-53597644)
chr3 (29-154)||(10191147-10191271)
chr3 (30-150)||(18096739-18096863)
chr3 (29-149)||(28412870-28412989)
chr3 (16-143)||(47701526-47701653)
chr3 (30-149)||(18099010-18099133)
chr3 (73-149)||(25634219-25634294)
chr3 (18-149)||(53915338-53915475)
chr3 (24-147)||(5926611-5926736)
chr3 (6-149)||(28101848-28101992)
chr3 (18-150)||(28181282-28181418)
chr3 (18-94)||(48361567-48361645)
chr3 (30-133)||(5886496-5886599)
chr3 (30-133)||(5899969-5900072)
chr3 (24-149)||(6484644-6484773)
chr3 (62-149)||(25389238-25389326)
chr3 (6-149)||(6232067-6232208)
chr3 (29-149)||(25533723-25533842)
chr3 (29-149)||(51726847-51726966)
chr3 (29-149)||(4103736-4103855)
chr3 (18-149)||(9604447-9604583)
chr3 (31-149)||(11170670-11170788)
chr3 (62-140)||(43228618-43228696)
chr3 (24-149)||(51674608-51674737)
chr3 (29-149)||(6063283-6063404)
chr3 (6-149)||(43226350-43226495)
chr3 (6-149)||(47148745-47148885)
chr3 (33-149)||(18162960-18163080)
chr3 (29-149)||(38210669-38210789)
chr3 (6-129)||(25688021-25688150)
chr3 (6-134)||(53468312-53468443)
chr3 (18-149)||(53591463-53591597)
chr3 (30-149)||(54691417-54691538)
chr3 (24-133)||(4666800-4666911)
chr3 (101-149)||(14634291-14634339)
chr3 (29-132)||(38890338-38890441)
chr3 (6-149)||(3307027-3307176)
chr3 (5-133)||(1620329-1620452)
chr3 (62-142)||(7606450-7606530)
chr3 (82-149)||(21702895-21702960)
chr3 (100-149)||(31021012-31021061)
chr3 (80-149)||(36957651-36957719)
chr3 (73-147)||(11066923-11066995)
chr3 (29-72)||(42992563-42992606)
chr3 (65-149)||(3859845-3859930)
[»] scaffold0057 (1 HSPs)
scaffold0057 (5-149)||(16501-16643)
[»] scaffold0025 (1 HSPs)
scaffold0025 (29-149)||(69133-69253)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-149)||(14231-14376)
[»] chr6 (67 HSPs)
chr6 (18-149)||(24338295-24338429)
chr6 (1-149)||(15346663-15346813)
chr6 (5-149)||(15367352-15367498)
chr6 (1-150)||(3027702-3027849)
chr6 (29-149)||(2628727-2628847)
chr6 (34-149)||(17012387-17012502)
chr6 (18-150)||(3629710-3629846)
chr6 (1-133)||(26945462-26945593)
chr6 (30-149)||(11982872-11982993)
chr6 (21-149)||(3631784-3631915)
chr6 (29-149)||(28241163-28241282)
chr6 (1-135)||(19696758-19696889)
chr6 (34-149)||(26932403-26932518)
chr6 (29-150)||(12195353-12195475)
chr6 (1-149)||(15719960-15720105)
chr6 (32-145)||(14466674-14466787)
chr6 (29-150)||(5273054-5273177)
chr6 (29-142)||(14507025-14507137)
chr6 (30-149)||(9020276-9020398)
chr6 (1-149)||(22610994-22611138)
chr6 (31-149)||(30034447-30034562)
chr6 (69-149)||(6610362-6610440)
chr6 (29-149)||(33309209-33309329)
chr6 (29-149)||(33311478-33311598)
chr6 (78-149)||(25465444-25465513)
chr6 (62-149)||(29754549-29754636)
chr6 (62-152)||(26065958-26066048)
chr6 (24-149)||(3394708-3394837)
chr6 (6-152)||(3233564-3233717)
chr6 (30-149)||(26065333-26065457)
chr6 (62-149)||(26068235-26068322)
chr6 (30-149)||(26085302-26085426)
chr6 (24-133)||(30728686-30728797)
chr6 (29-149)||(30967554-30967673)
chr6 (62-133)||(4816088-4816158)
chr6 (65-150)||(18322482-18322567)
chr6 (65-149)||(1230090-1230173)
chr6 (22-149)||(22869950-22870075)
chr6 (22-149)||(25480217-25480346)
chr6 (76-149)||(8717195-8717268)
chr6 (73-150)||(32280386-32280464)
chr6 (6-149)||(13057517-13057659)
chr6 (62-149)||(19704403-19704493)
chr6 (78-133)||(28078064-28078118)
chr6 (78-150)||(16455279-16455350)
chr6 (22-147)||(22490952-22491077)
chr6 (24-110)||(1069603-1069691)
chr6 (73-148)||(3918767-3918841)
chr6 (6-154)||(15540985-15541132)
chr6 (6-46)||(13040077-13040117)
chr6 (65-133)||(20915214-20915281)
chr6 (28-149)||(14458607-14458729)
chr6 (55-150)||(7294167-7294261)
chr6 (5-46)||(12937146-12937187)
chr6 (100-149)||(25078416-25078465)
chr6 (1-143)||(26505244-26505384)
chr6 (30-149)||(15530003-15530129)
chr6 (97-149)||(28037576-28037630)
chr6 (73-133)||(3919166-3919224)
chr6 (100-149)||(12911369-12911418)
chr6 (97-149)||(13040179-13040232)
chr6 (105-149)||(22857843-22857888)
chr6 (1-66)||(22857887-22857950)
chr6 (78-149)||(30445911-30445981)
chr6 (96-149)||(10584358-10584413)
chr6 (97-149)||(17038514-17038565)
chr6 (101-149)||(20544843-20544891)
[»] scaffold0005 (3 HSPs)
scaffold0005 (24-151)||(52328-52458)
scaffold0005 (24-149)||(50329-50457)
scaffold0005 (29-143)||(183488-183602)
[»] scaffold0127 (1 HSPs)
scaffold0127 (29-149)||(12715-12835)
[»] scaffold0038 (1 HSPs)
scaffold0038 (29-149)||(41325-41444)
[»] scaffold0250 (1 HSPs)
scaffold0250 (29-146)||(3206-3322)
[»] scaffold0004 (1 HSPs)
scaffold0004 (6-149)||(80155-80305)
[»] scaffold0068 (1 HSPs)
scaffold0068 (29-149)||(29497-29616)
[»] scaffold0045 (1 HSPs)
scaffold0045 (18-143)||(85538-85667)
[»] scaffold1674 (1 HSPs)
scaffold1674 (29-147)||(1294-1412)
[»] scaffold0031 (1 HSPs)
scaffold0031 (30-152)||(79508-79634)
[»] scaffold0472 (1 HSPs)
scaffold0472 (29-149)||(6526-6646)
[»] scaffold0133 (1 HSPs)
scaffold0133 (6-147)||(5105-5245)
[»] scaffold0370 (1 HSPs)
scaffold0370 (65-133)||(1310-1377)
[»] scaffold0267 (1 HSPs)
scaffold0267 (62-151)||(385-475)
[»] scaffold0011 (1 HSPs)
scaffold0011 (18-154)||(35901-36044)
[»] scaffold0339 (1 HSPs)
scaffold0339 (22-151)||(4307-4439)
[»] scaffold0154 (1 HSPs)
scaffold0154 (6-148)||(11315-11465)
[»] scaffold0224 (1 HSPs)
scaffold0224 (5-101)||(15723-15814)
[»] scaffold0140 (2 HSPs)
scaffold0140 (62-149)||(24751-24839)
scaffold0140 (76-149)||(22491-22564)
[»] scaffold0256 (1 HSPs)
scaffold0256 (97-149)||(16605-16656)
[»] scaffold0008 (1 HSPs)
scaffold0008 (100-149)||(57271-57320)


Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 5664571 - 5664836
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgtt---gttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattact 97  Q
    |||||||||||||| |||||||||||||||||   ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  5664571 tttcgtgtgttctctctttcttttctctcgttaatgttttctacttttggtttgtcattataacttccatacactttgttttggttgcttgattattacc 5664670  T
Q  98 tgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacactttggtaggaaagtagcacacaataagcgccatatataaacaccaaa 197  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  5664671 ttctccacacatcaagtattttattggtgtgattttcatcgaattcacaacactttggtaggaatgtagtacacaataagcgccatatataaacaccaaa 5664770  T
Q  198 tgcaaaataaaatcagcccctcaaccatctcacttttctctggagctaactcaagaactagatatt 263  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5664771 tgcaaaataaaatcagcccctcaaccatctcacttttctctgtagctaactcaagaactagatatt 5664836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18534829 - 18534680
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| |||||| | ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18534829 tttcgtgtgttctctctttcttt-ctctcgctattttctacttttg-tttgtgtttataacttccatacactttgttttggttgcttgattattacttgc 18534732  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaacactt 152  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  18534731 tccacacatcaagtattttattggtgtgagtttcatcgaattcacgacactt 18534680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 18537463 - 18537325
Alignment:
Q  9 gttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacaca 108  Q
    |||||| |||||||| ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18537463 gttctctctttcttt-ctctcgttgttttatacttttg-tttgtgtttataacttccatacactttgttttgattgcttgattattacttgctccacaca 18537366  T
Q  109 tcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||  ||||||  ||||||||||||||||||    
T  18537365 tcaagtattttataggtgtgaacttcatcgaattcacaaca 18537325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 12102440 - 12102567
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||  |||||| |||||||| || ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  12102440 tttctctcactgttttttacttttgctt-gtgtttataacttccatacactttgttttggttgctcggttattacttgctccacacatcaagtagtttat 12102538  T
Q  122 ttgtgtgattttcatcgaattcacaacac 150  Q
    | |||||||||||||||||||||||||||    
T  12102539 tggtgtgattttcatcgaattcacaacac 12102567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 19323083 - 19323178
Alignment:
Q  55 ttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacac 150  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19323083 ttataacttccatacactttattttagttgcttgattattacttgctccacacatcaagtattttattggtgtgattttcatcgaattcacaacac 19323178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 18409322 - 18409185
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    |||||||||| | |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |||    
T  18409322 ttttctctcgctattttctacttttgtcttgtgattataacttccatacactttgttttggttgcttgactatcacttgctccacacatcaagtttatta 18409223  T
Q  121 tttgtgtga--ttttcatcgaattcacaacactttggt 156  Q
    || ||||||  |||||||||||||||||||| ||||||    
T  18409222 ttggtgtgattttttcatcgaattcacaacaatttggt 18409185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38890222 - 38890072
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||  ||||| ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  38890222 tttcgtgtgttctctctttcttttctctcgctgttttctaattttgccttgtgtttataacttccatacactttg-tttggttgctagattattccttgc 38890124  T
Q  101 tccacacatcaagtattttatttgtgtga---ttttcatcgaattcacaaca 149  Q
    |||||| ||||| ||||||||| ||||||   |||| |||||||||||||||    
T  38890123 tccacatatcaaatattttattggtgtgattttttttatcgaattcacaaca 38890072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 8756244 - 8756103
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    |||||||||| |||||||| ||||||||||||| |||||||| || ||| ||||||||  ||  ||||| ||||||||||||||||||||||||||||||    
T  8756244 gtgtgttctctctttcttt-ctctcgttgttttttacttttgctt-gtgtttataactgtcacccactt-gttttggttgcttgattattacttgctcca 8756148  T
Q  105 cacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  8756147 cacatcaagtattttattgatgtgattttcatcgaattcacaaca 8756103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 38928158 - 38928023
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  38928158 ttcttttatctcgttgttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 38928059  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    | ||||| |||||| |||||||||||||| ||||||    
T  38928058 tgttattggtgtgatttttcatcgaattcgcaacac 38928023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15032544 - 15032401
Alignment:
Q  1 tttcgtgtgttctcgctttcttt---tctctcgttgtttt-ctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattac 96  Q
    |||||||||||||  ||||||||   ||||||| |||||| ||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||    
T  15032544 tttcgtgtgttctttctttctttctttctctcgctgtttttctacttttg-tttatgtttataacttccatacactttgttt-ggttgcttgattattac 15032447  T
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||    
T  15032446 ttgctccgcacatcaagtattttattggtgtgattttcatcgaatt 15032401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 2891633 - 2891781
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||||||||||||||||||| ||||| |||||| |  |||||||||||| |||||||||||||||||||  ||||||    
T  2891633 tgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattattctttgctc 2891732  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||||||| | ||||| |||||| |||||||||||||||||||||    
T  2891733 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaacac 2891781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 41997835 - 41997975
Alignment:
Q  9 gttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacaca 108  Q
    |||||| |||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  41997835 gttctctctttctttgctctcgctgttttctacttttg-tttgtgattataacttccatacactttgttttggttgcttgattatcactttctccacaca 41997933  T
Q  109 tcaagtattttatttgtgtg-attttcatcgaattcacaaca 149  Q
    |||||| | ||||| |||||  |||||||| |||| ||||||    
T  41997934 tcaagtttattattggtgtgttttttcatcaaattaacaaca 41997975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 16453662 - 16453796
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||  |||||||||||||||| ||||| ||||||||  | ||||||||||||||||||||| ||||||| ||||||||||||||||||||     
T  16453662 ttcttttctctcactgttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcacttgctccacacatcaagtt 16453761  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | ||||| |||||| ||||||||||||||||||||    
T  16453762 tgttattggtgtgatttttcatcgaattcacaaca 16453796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 36378645 - 36378777
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||  | |||||||||||||| ||||||| |||||| |  | |||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  36378645 ttcttttctcctgctgttttctacttttcgtttgtgtttataattgtttcatacactttgttt-ggttgcttgattattacttgctccacatatcaagta 36378743  T
Q  116 ttttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||| |||||||||||||||||||| |||||    
T  36378744 ttttattggtgtgattttcatcgaattcgcaaca 36378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 30136891 - 30137031
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||  |||||||| |||||||||||||| |||||    
T  30136891 tgtgttctctctttcttttctcttgttgttttctacttttggtttgtgtttataacttctatacacttt-atttggttgtttgattattacttgttccac 30136989  T
Q  106 acatcaagtattttatttgtgtgatttt-catcgaattcacaa 147  Q
    | ||||| || ||||||  ||||||||| ||||||||| ||||    
T  30136990 atatcaaata-tttattgatgtgattttacatcgaatttacaa 30137031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 53405508 - 53405626
Alignment:
Q  32 tgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-t 130  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| |    
T  53405508 tgttttctacttttggcttgtatttataacttccatacattttgttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgatt 53405607  T
Q  131 tttcatcgaattcacaaca 149  Q
    ||||||||||||| |||||    
T  53405608 tttcatcgaattcgcaaca 53405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 47563117 - 47563251
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    ||||||||| |||||||||||||||| || || |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||    
T  47563117 tttctctcgctgttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgtt 47563216  T
Q  120 atttgtgtgattt--tcatcgaattcacaacactt 152  Q
    ||| ||||| |||  ||||| ||||||||||||||    
T  47563217 attggtgtggttttctcatcaaattcacaacactt 47563251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 14787402 - 14787272
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||| |||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||    
T  14787402 tctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttat 14787303  T
Q  122 ttgtgtga-ttttcatcgaattcacaacact 151  Q
    | |||||| |||||||||||||| |||||||    
T  14787302 tggtgtgatttttcatcgaattcgcaacact 14787272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 22802699 - 22802577
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||| ||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  22802699 gttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgt 22802600  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  22802599 gatttttcatcgaattcacaaca 22802577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 16455585 - 16455714
Alignment:
Q  23 ttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    |||||||| ||||||||| |||| | || || ||||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||    
T  16455585 ttctctcgctgttttctagttttagcttatgattataactgttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgtta 16455684  T
Q  121 tttgtgtga-ttttcatcgaattcacaaca 149  Q
    || |||||| ||||||||||||||||||||    
T  16455685 ttggtgtgatttttcatcgaattcacaaca 16455714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 14789401 - 14789273
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||| |||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||    
T  14789401 tctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttat 14789302  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||||||||| |||||    
T  14789301 tggtgtgatttttcatcgaattcgcaaca 14789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 56030818 - 56030946
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||| |||  ||||||||||| ||||||| | ||||    
T  56030818 tttctctcgctgttttctacttttg-tttgtatttataacttccatacactttgttttggttgcgtgactatctcttgctccacatatcaagtttattat 56030916  T
Q  122 ttgtgtga-ttttcatcgaattcacaacac 150  Q
    | |||||| |||||||||||||| ||||||    
T  56030917 tggtgtgatttttcatcgaattcgcaacac 56030946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 2484834 - 2484715
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  2484834 cgttgttttctacttttggcttgtatttaattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 2484736  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  2484735 attttcatcgaattcacaaca 2484715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 3937266 - 3937126
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||| || || |||||||||||||||||| ||||||||||||||  |||||||| |    
T  3937266 tgtgttctctctttcttt-ctctcgttgttttctacttttg-tttgtgattttatcttccatacactttgttt-ggttgcttgattatcccttgctcctc 3937170  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||| | ||||| |||||| |||||||||||||| |||||    
T  3937169 acatcaagt-tgttattggtgtgatttttcatcgaattcgcaaca 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 26085938 - 26085816
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| ||||    
T  26085938 cgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttgctccacacatcaagt-tgttattggtgt 26085840  T
Q  128 gattttcatcgaattcacaacact 151  Q
    |||| ||||||||||| |||||||    
T  26085839 gattctcatcgaattcgcaacact 26085816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 49088915 - 49089044
Alignment:
Q  23 ttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||||||||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  ||| ||| ||||||||||| | |||    
T  49088915 ttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtttgtta 49089014  T
Q  121 tttgtgtga-ttttcatcgaattcacaaca 149  Q
    || |||||| |||||||||||||| |||||    
T  49089015 ttggtgtgatttttcatcgaattcgcaaca 49089044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 5635437 - 5635313
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||| | ||||| |||||    
T  5635437 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgattgattatcccttgctccacacatcaagt-tgttattggtgtg 5635339  T
Q  129 attttcatcgaattcacaacactttg 154  Q
    ||||||||||||||| ||||| ||||    
T  5635338 attttcatcgaattcgcaacagtttg 5635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 6765216 - 6765335
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||||| || ||||  |||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  6765216 cgttgttttctacttt-ggcttgtatttataa-ttccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtgtg 6765313  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  6765314 atttttcatcgaattcacaaca 6765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 27499408 - 27499536
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||  ||||| |||||| |  |||||| ||||||||||||||||||| |||||  |||||||||||||||||| | ||||    
T  27499408 tctctcgttgttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttggttattcattgctccacacatcaagtttgttat 27499507  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| ||||||||||||||| ||||    
T  27499508 tggtgtgatttttcatcgaattcagaaca 27499536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 6133197 - 6133326
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||  ||||| |||||| |  | |||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||    
T  6133197 tctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattccttgctccacacatcaagtttgttat 6133296  T
Q  122 ttgtgtgatttt---catcgaattcacaac 148  Q
    | |||| |||||   |||||||||||||||    
T  6133297 tggtgtaattttttccatcgaattcacaac 6133326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 24348573 - 24348692
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||| |||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  24348573 cgttgttttctatttttggcttgtatttagttgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 24348671  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  24348672 attttcatcgaattcgcaaca 24348692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 33415469 - 33415334
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataactt--ccatacactttg-ttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| |   |||||||||||| |||||||||||||| |||  |||||||||||||||||||    
T  33415469 ttcttttctctcgctgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagt 33415370  T
Q  115 attttatttgtgtgattt-tcatcgaattcacaaca 149  Q
     | ||||||||||||||| |||||| |||| |||||    
T  33415369 ttgttatttgtgtgatttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 36380716 - 36380834
Alignment:
Q  32 tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||| ||||| |||||| |  | |||||||||||||| | ||||||||| ||||||| ||||||||||||| ||||||||| ||||||    
T  36380716 tgttttctacttttggcttgtgtttataattgtttcatacactttgttt-gattgcttgatcattacttactccacacatcaaatattttattggtgtga 36380814  T
Q  130 ttttcatcgaattcacaaca 149  Q
    ||||||||||||| ||||||    
T  36380815 ttttcatcgaattgacaaca 36380834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 5198809 - 5198895
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  5198809 ttccatacactttgttttggttgcttgattatccattgctccacacatcaagt-tattattggtgtgattttcatcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 18709124 - 18709003
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||| |||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  18709124 cgttgttttctactattggcttgtatttataactttcatacactttgttttggttgcttgattatgccttgctccacacatcaagt-tgttattggtgtg 18709026  T
Q  129 --attttcatcgaattcacaaca 149  Q
       |||||||| |||||||||||    
T  18709025 gttttttcatcaaattcacaaca 18709003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 24446635 - 24446502
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataactt--ccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||| ||||||||||||||||| ||||| |||||| ||  ||||||||||| ||||||||||||||||||  ||| || ||||||||||||     
T  24446635 ttcttttctctc-ttgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtt 24446537  T
Q  116 ttttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||||| ||| |||||||||||||||||    
T  24446536 tgttattggtgtgttttctcatcgaattcacaaca 24446502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 31849526 - 31849440
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  31849526 ttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttcatcgaattcgcaaca 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28454019 - 28454167
Alignment:
Q  1 tttcgtgtgttctcgctttcttt---tctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattact 97  Q
    |||||||||||||| ||||||||   ||||  ||||||||||||||||| || ||| |||||| |  ||| ||||||||||||||| ||||||||||  |    
T  28454019 tttcgtgtgttctctctttctttctttctccggttgttttctacttttgctt-gtgtttataattgtcatccactttgttttggtttcttgattatt--t 28454115  T
Q  98 tgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||| ||||||||||||| | |||| |||||||||||| |||||||||||||    
T  28454116 tgcttcacacatcaagtaatatattggtgtgattttcaacgaattcacaaca 28454167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 36919576 - 36919435
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||  ||||| |||||| |  |||||||||||| |||||||||| |||||||  |||||||    
T  36919576 tgtgttctctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatcccttgctc 36919477  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattc 143  Q
    |||||||||||| | ||||| |||||| ||||||||||||||    
T  36919476 cacacatcaagtttgttattggtgtgatttttcatcgaattc 36919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 4215655 - 4215792
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    |||||||||||||||  ||||||||||||||| ||||| |||||| |  | ||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  4215655 ctttcttttctctcgcagttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattattccttgcttcacacatcaag 4215754  T
Q  114 tattttatttgtgtga---ttttcatcgaattcacaaca 149  Q
    | | ||||||||||||   || ||||||||||| |||||    
T  4215755 t-tgttatttgtgtgagttttctcatcgaattcgcaaca 4215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 24889164 - 24889286
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||| | ||||||| ||||||||||||||||||| | ||||| ||||    
T  24889164 gttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttagattattccttgctccacacatcaagt-tgttattggtgt 24889262  T
Q  128 g--attttcatcgaattcacaaca 149  Q
    |  ||||||||||||||| |||||    
T  24889263 gatattttcatcgaattcgcaaca 24889286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 37089333 - 37089212
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||   |||||||||||||||||| | ||||| |||||    
T  37089333 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttgttattggtgtg 37089234  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  37089233 atttttcatcgaattcgcaaca 37089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 37313055 - 37312923
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    |||||||||| |||||||||||||||| || || |||||| |  | ||||||||||||||||||||||||| |||  ||||||||||||||||||| | |    
T  37313055 ttttctctcgctgttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttat 37312956  T
Q  119 tatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||| |||||| |||||||| ||||| ||||||    
T  37312955 tattggtgtgatttttcatcaaattcgcaacac 37312923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 9174070 - 9173987
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  9174070 catacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattagtgtgattttcatcgaattcgcaaca 9173987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16185832 - 16185686
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||| || | |||||||||||||||||||| | ||||| ||||||||  ||  ||| ||||||||||||||||||||  | ||||    
T  16185832 tttcgtgtgttctctcttttttgtttctcgttgttttctactttt-gcttgtgtttataactgtcacccac-ttgttttggttgcttgatta--atttgc 16185737  T
Q  101 tccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||| ||||||||||||||||| ||||||  |||||| |||||||||||||    
T  16185736 tccatacatcaagtattttattggtgtgatcttttcaacgaattcacaaca 16185686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 8631346 - 8631260
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  8631346 ttccatacactttgttttagttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttcatcgaattcgcaaca 8631260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 9176401 - 9176315
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||| |||||||| |||||    
T  9176401 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttcgtcgaattcgcaaca 9176315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 17662237 - 17662092
Alignment:
Q  6 tgtgttctcgctttcttttctctc-gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| |||  ||||||| | ||||||||||||||||||  |||| |||||| |  ||||||||||||| |||| ||||||||||||  |||||||    
T  17662237 tgtgttctctcttctttttctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcccttgctc 17662138  T
Q  103 cacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| |||||||||||| ||||||| |||||    
T  17662137 cacacatcaagt-tgttattggtgtgattttcaacgaattcgcaaca 17662092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 36921474 - 36921338
Alignment:
Q  18 ttcttttctctcgt--tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    |||||||||||| |  |||||||||||||||| ||||| |||||| |  | |||||||||| |||||||||| |||||||  ||||||||||||||||||    
T  36921474 ttcttttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatcccttgctccacacatcaag 36921375  T
Q  114 tattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | | ||||| |||||| |||||||||||||| |||||    
T  36921374 tttgttattggtgtgatttttcatcgaattcgcaaca 36921338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 5101276 - 5101404
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||| | ||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  |||| |||||||||||||| | ||||    
T  5101276 tctctcggtgttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtttgttat 5101375  T
Q  122 ttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||| |||||||||||||||||    
T  5101376 tggtgtgttttctcatcgaattcacaaca 5101404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 40091378 - 40091259
Alignment:
Q  34 ttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-- 129  Q
    |||||||||||||| ||||| |||||| |  |||||||||||| ||||||||||||||||||   |||||||||||||||||| | ||||| ||||||      
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaat 40091279  T
Q  130 ttttcatcgaattcacaaca 149  Q
    |||||||||||||| |||||    
T  40091278 ttttcatcgaattcgcaaca 40091259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 11006181 - 11006094
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttc-atcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||| ||||| |||||||||||||||    
T  11006181 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttcgatcgaattcacaaca 11006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 11008495 - 11008408
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttc-atcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||| ||||| |||||||||||||||    
T  11008495 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttcgatcgaattcacaaca 11008408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 22046648 - 22046526
Alignment:
Q  28 tcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||||  ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  22046648 tcgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 22046550  T
Q  128 gatttt--catcgaattcacaaca 149  Q
    ||||||   |||||||||||||||    
T  22046549 gatttttcgatcgaattcacaaca 22046526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 22800854 - 22800705
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgtt---ttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| |||  |||||||||| ||||   |||||||||||| ||||| |||||| |  |||||| |||||||||||||||||||| |||  |||||    
T  22800854 tgtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactatcccttgc 22800755  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||| |||||||||| | ||||| |||||| |||||||||||||| |||||    
T  22800754 tccccacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 22800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 7941728 - 7941814
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||||| | || || |||||||||||||||||||| |||||    
T  7941728 ttccatacactttgttttggttgcttaattatcccttgctccacacatcaagt-tgttgttggtgtgattttcatcgaattcgcaaca 7941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 40637415 - 40637530
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgtttt--ggttgcttgattattactt 98  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  |||||||||||||||||  ||||||||||||||| |||    
T  40637415 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattcctt 40637514  T
Q  99 gctccacacatcaagt 114  Q
    ||||||||||||||||    
T  40637515 gctccacacatcaagt 40637530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 9148607 - 9148728
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  |||| |||||||||||||| | ||||| |||||    
T  9148607 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgttccacacatcaagt-tgttattggtgtg 9148705  T
Q  129 attt-tcatcgaattcacaacac 150  Q
     ||| ||||||||||| ||||||    
T  9148706 ttttctcatcgaattcgcaacac 9148728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 22782698 - 22782577
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  22782698 cgttgttttctacttttggcttgtatttataactttcatacgctttgtttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 22782600  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||| |||||||| |||||    
T  22782599 gatttttcgtcgaattcgcaaca 22782577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 9864048 - 9864198
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtt-tgtggttataact--tccatacactttgttttggttgcttgattattact 97  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| || ||   ||||||||  |||   |||||| |||||||| ||||||||||  |    
T  9864048 tttcgtgtgttctctctttcttt-ctctcgttgttttctacttttgcttgtgattttataactgttcc---cactttattttggtttcttgattattttt 9864143  T
Q  98 tgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacact 151  Q
    |  ||||||||||||||||||||||  ||||| |||||| |||||||||||||||    
T  9864144 tcttccacacatcaagtattttattgatgtgatttttcaacgaattcacaacact 9864198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 16931751 - 16931631
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||||||||||||||| |||||  |||||||||||||| |||| | ||||| |||||    
T  16931751 cgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatcccttgctccacacattaagt-tgttattggtgtg 16931653  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  16931652 atttttcatcgaattcacaaca 16931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 40998946 - 40998877
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||| |||| ||||||    
T  40998946 ttgttttggttgcttgattattacttgtttcacacatcaaatattttatttgtgtgatattcaacgaatt 40998877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 51015617 - 51015702
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  51015617 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt 51015702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 24879331 - 24879424
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattatt 94  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||||||||    
T  24879331 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatt 24879424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 14633690 - 14633804
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||| ||||||| ||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  14633690 cgttgttttctacttttggcttgtatttaattgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 14633788  T
Q  129 attt-tcatcgaattc 143  Q
    |||| |||||||||||    
T  14633789 atttctcatcgaattc 14633804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 10113272 - 10113351
Alignment:
Q  69 cactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||| |||||| ||| |||||||||    
T  10113272 cactttgttttggttgcttgattatt--ttgctccacacatcaaatattttattggtgtgatttttcaacgacttcacaaca 10113351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 11437734 - 11437855
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||| || |||||||||||  ||||||||| ||||||||| | ||||| ||||    
T  11437734 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggctgcttgattatctcttgctccatacatcaagt-tgttattggtgt 11437832  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  11437833 gatttttcatcgaattcacaaca 11437855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12395837 - 12395712
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataactt--ccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| | ||||||||| ||||||||||||  |||| |||||| ||  | |||| ||||||||||||||| ||||||| ||||||||    
T  12395837 tgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctc 12395738  T
Q  103 cacacatcaagtattttatttgtgtg 128  Q
    |||||||||||| | ||||| |||||    
T  12395737 cacacatcaagtttgttattggtgtg 12395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 12400799 - 12400674
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataactt--ccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| | ||||||||| ||||||||||||  |||| |||||| ||  | |||| ||||||||||||||| ||||||| ||||||||    
T  12400799 tgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctc 12400700  T
Q  103 cacacatcaagtattttatttgtgtg 128  Q
    |||||||||||| | ||||| |||||    
T  12400699 cacacatcaagtttgttattggtgtg 12400674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 22780333 - 22780212
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| || |  |||||||||  |||| ||||||||| |||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  22780333 cgttgttttctacttttggcttatatttataactttgatacgctttgtttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 22780235  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  22780234 gatttttcatcgaattcgcaaca 22780212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 38409576 - 38409697
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||| |||||||| |||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  38409576 cgttgttttctacttttggcttgtatttaattgttccatacaatttgttttagttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 38409674  T
Q  129 attttc-atcgaattcacaacac 150  Q
     ||||| || |||||||||||||    
T  38409675 tttttcgattgaattcacaacac 38409697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 3824569 - 3824447
Alignment:
Q  34 ttttctactttt-ggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||| || ||||| ||||||||  |||||||| |||| |||||||||||||| |||  ||||||||||||||||||| | ||||| ||||||    
T  3824569 ttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga 3824470  T
Q  130 ttt---tcatcgaattcacaaca 149  Q
    |||   |||||||||||||||||    
T  3824469 tttttctcatcgaattcacaaca 3824447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 22044352 - 22044267
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||||| ||||  |||    || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22044352 cgttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt 22044267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 47210755 - 47210655
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgat 130  Q
    ||||||||||||||||| ||||  |||    |||||||||||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||||    
T  47210755 ttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgctttattatctcttgctccacacatcaagt-tgttattggtgtgat 47210657  T
Q  131 tt 132  Q
    ||    
T  47210656 tt 47210655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 52043555 - 52043412
Alignment:
Q  4 cgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgtttt--ggttgcttgattattacttgct 101  Q
    |||| |||||| |||||||| |||||| |||||||||| |||| || ||| ||||||||  ||  ||| |||||||  |||||||||||||||   ||||    
T  52043555 cgtgagttctctctttcttt-ctctcgctgttttctacgtttgctt-gtgtttataactgtcacccacgttgttttttggttgcttgattattc--tgct 52043460  T
Q  102 ccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||| |||||||||| | | |||||||||||    
T  52043459 ccacacatcaagtattttattggtgtgatttttaacaaattcacaaca 52043412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 11435328 - 11435430
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    ||||||||||||||||| ||||  |||    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||| | ||||| ||||||    
T  11435328 ttgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtga 11435426  T
Q  130 tttt 133  Q
    ||||    
T  11435427 tttt 11435430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 19096238 - 19096371
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||   |  ||| |||| |||||||||||| |||  ||| ||||||||||||| |     
T  19096238 ctttattttctctcgttgttttctactttt-gtttgtgattataactgttacccac-ttgtattggttgcttgactatcccttactccacacatcaaatt 19096335  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    | ||||| |||||| |||||||||||||| ||||||    
T  19096336 tattattagtgtgatttttcatcgaattcgcaacac 19096371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 52942453 - 52942347
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||| |||||| |  ||||||||||||| ||||| |||| |||||||  ||| ||||||||||||| | | |||||||||    
T  52942453 gttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgttatttgtg 52942354  T
Q  127 tgatttt 133  Q
    |||||||    
T  52942353 tgatttt 52942347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47150890 - 47150742
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattact 97  Q
    |||| ||||||||| |||||||| |||||||||| ||||||||||| |||||| |||||| |  |||   ||| ||| ||||||||||||||||| |  |    
T  47150890 tttcttgtgttctctctttcttt-ctctcgttgtcttctacttttg-tttgtgtttataattgttcc---cacattgattttggttgcttgattact--t 47150798  T
Q  98 tgctccacacatcaa----gtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||    ||||||||||||||||||||||| | |||||||||||    
T  47150797 tgctccacacatcaatcaagtattttatttgtgtgattttcaacaaattcacaaca 47150742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 47868773 - 47868894
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||     |||||||||||||| |||||||||| |||||||  ||||||||||||||||||| | ||||| ||||    
T  47868773 cgttgttttctacttttggcttgtattttattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagt-tgttattggtgt 47868871  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  47868872 gatttttcatcgaattcgcaaca 47868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 3982154 - 3982032
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||| |||||||||   || ||||||| ||||||||  ||  |||||| ||||||||||||||||| |  || ||||||||| ||||||||||||    
T  3982154 tttctctcgctgttttctatcgtttgtttgtgtttataactgtcacccacttttttttggttgcttgattaat--tttctccacacaccaagtattttat 3982057  T
Q  122 ttgtgtgattttcatcgaattcaca 146  Q
    | |||||||||| |  |||||||||    
T  3982056 tggtgtgatttttaatgaattcaca 3982032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 13547495 - 13547643
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||||||| | |||||||||||||| ||||| ||||||   |||||||||||||| |||||||||  | ||||| ||||| |    
T  13547495 tgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgtt 13547594  T
Q  102 ccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||| | ||||| ||||| ||| |||| |||| |||||||    
T  13547595 ccacacatcaagtttgttattggtgtgttttctcattgaatgcacaaca 13547643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 22134544 - 22134476
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatt 131  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||| | ||||| ||||||||    
T  22134544 ttccatacactttgttttggttgtttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 44599799 - 44599680
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    |||||||| ||||||||||||||||| |||| | ||||||||||||||||||| | ||||| |||||    
T  44599799 cgttgttttctacttttgccttgtatttaattattccatacgctttgttttggttgcttaatta-tccttgctccacacatcaagt-tgttattggtgtg 44599702  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  44599701 atttttcatcgaattcgcaaca 44599680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 47275082 - 47275214
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    ||||||||| |||||||||||||||| ||||| ||||||   ||| ||||||||  ||||| ||||||||||||  ||| ||||||||||||||| | ||    
T  47275082 tttctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgtt 47275181  T
Q  120 atttgtgtgattt-tcatcgaattcacaacact 151  Q
    |||  |||| |||  || |||||||||||||||    
T  47275182 attgatgtgttttcacaacgaattcacaacact 47275214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 48486687 - 48486803
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| |||||| |  ||||| ||||||||||| |||||||||||||  |||| ||||| |||||| | | ||||| ||||    
T  48486687 gttgttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgt 48486786  T
Q  128 gattt-tcatcgaattc 143  Q
    | ||| |||||||||||    
T  48486787 gttttctcatcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 18847558 - 18847627
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  18847558 ttccatacactttgttt-ggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 18847627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 10114653 - 10114798
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||| ||||||||| |||||||| ||||||||||| ||||| |||  || ||| ||||||||  ||  ||||||||||||||||||| || |||  ||      
T  10114653 tttcatgtgttctctctttcttt-ctctcgttgttatctaccttttctt-gtgtttataactatcacccactttgttttggttgctttataatt--ttat 10114748  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| ||||||||| |||||| |||||| |||| ||||||||    
T  10114749 tccacacatcaaatattttattggtgtgatttttcaacgaactcacaaca 10114798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 22132317 - 22132248
Alignment:
Q  62 ttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatt 131  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||| | ||||| ||||||||    
T  22132317 ttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 29609490 - 29609362
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||| || | |  ||||| |   || ||| ||||||||||||||||||||||  ||      
T  29609490 tttcgtgtgttctctctttcttt-ctatcgttgtttcctacttttgctt-gcgtatataattgttatccacgttgttttggttgcttgattatt--ttat 29609395  T
Q  101 tccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||| ||||||||||||||| ||||||||||    
T  29609394 tccacatatcaagtattttattggtgtgatttt 29609362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 47078686 - 47078744
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||||| |||||||||||||  ||||||||||||| |||||||||||| ||||||||||    
T  47078686 ttgttttgattgcttgattatt--ttgctccacacattaagtattttattggtgtgatttt 47078744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 18311271 - 18311208
Alignment:
Q  95 acttgctccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaacactttggt 156  Q
    |||||||||||||||||||| | ||||| ||||||  |||||||||||||||||||| ||||||    
T  18311271 acttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaatttggt 18311208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 5516162 - 5516090
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    ||||||| |||||||||||| |  || ||||||||||||||||||||||| |||||||||| | || ||||||||    
T  5516162 ttgttttagttgcttgattaat--ttactccacacatcaagtattttattggtgtgatttttaacggattcacaa 5516090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 24880793 - 24880888
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataa--cttccatacactt--tgttttggttgcttgattatt 94  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||| ||||| ||||||   |||| |||||||  |||||||||||||||||||||    
T  24880793 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattatt 24880888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 31983454 - 31983383
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||||||||||||  |||||||||||||||| |||||||||  |||||  ||||||||||||| ||||||    
T  31983454 ttggttgcttgattatt--ttgctccacacatcaaatattttattgatgtgattttttcatcgaatttacaaca 31983383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Complemental strand, 3578655 - 3578586
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgatta 92  Q
    ||||||||||||||||||||||||  |||||| ||||||||  ||  ||| ||||||||||||||||||||    
T  3578655 tttctctcgttgttttctactttt-atttgtgtttataactatcacccacgttgttttggttgcttgatta 3578586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 38270071 - 38269995
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||| |||  ||| ||||||||||||||| | ||||| ||||| |||  ||||||||| |||||    
T  38270071 ttgttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtgttttctatcgaattcccaaca 38269995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 25357998 - 25358122
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgtt-ttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    ||||||||||||||||||||||||| || ||| |||||| |  |||   ||| ||||| ||||||||||||||  |  || |||||||||||||||||||    
T  25357998 tttctctcgttgttttctacttttgctt-gtgtttataattgttcc---cacgttgttattggttgcttgattgct--ttcctccacacatcaagtattt 25358091  T
Q  119 tatttgtgtga--ttttcatcgaattcacaa 147  Q
    |||| ||||||  |||||| |||||||||||    
T  25358092 tattggtgtgattttttcaacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 9022698 - 9022765
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    |||||||||||||||||  |  |||||||||| ||||| |||||| |||||||||| | |||||||||||    
T  9022698 ttggttgcttgattatttgt--ctccacacatgaagtaatttattggtgtgatttttaacgaattcacaa 9022765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 54928611 - 54928548
Alignment:
Q  81 gttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcaca 146  Q
    ||||||||||||  |||||||||| | ||||| |||||||||  ||||||||| ||||||||||||    
T  54928611 gttgcttgatta--acttgctccatatatcaaatattttattaatgtgatttttatcgaattcaca 54928548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 22295576 - 22295646
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||| ||||||||||  |||||| | ||||||||||||||||| |||||| |||| | |||||||||||||    
T  22295576 ttggttacttgattatt--ttgctctagacatcaagtattttattggtgtgattttttaacgaattcacaaca 22295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 619440 - 619306
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| ||||||| |||   |||||||||||||||| | ||||| ||||||||   || ||| |||| |||||||||||| |||  ||| ||||||    
T  619440 tgtgttctctctttcttctctgctgttgttttctactttt-gcttgtgattataactgtgatccac-ttgtattggttgcttgactatcccttactccac 619343  T
Q  106 acatcaagtattttatttgtgtgattt-tcatcgaat 141  Q
    ||||||| | | ||||| ||||| ||| |||||||||    
T  619342 acatcaaatttattattggtgtgttttctcatcgaat 619306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 7e-55; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 2468127 - 2467979
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  2468127 tttcgtgtgttctctctttcttttctctcgttgttttctaattttgttttgtgattataacttccctacactttgttttggttgcttgactatcacttgc 2468028  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  2468027 tccacacatcaagtttattattggtgtgattttcatcgaattcacaaca 2467979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 31162550 - 31162697
Alignment:
Q  1 tttcgtgtgttctcgcttt-cttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttg 99  Q
    ||||||||||||||  ||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||| |||||||||||    
T  31162550 tttcgtgtgttctcttttttcttttctctcgttgttttctacttttggcttgtatttataacttccatacactttgttttggttacttaattattacttg 31162649  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||    
T  31162650 ctccacacatcaagtattttattggtgtgattttcatgaaattcacaa 31162697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 13858477 - 13858334
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||| |||||  |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13858477 tgtgttctccctttcttt-ctctcactgttttctacttttggcttgtgtttataacttccatacactttgttttggttgcttgattatcacttgctccac 13858379  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||| | ||||| |||||| ||||||||||||| ||||||    
T  13858378 acatcaagtttcttattggtgtgatttttcatcgaatttacaaca 13858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 21482648 - 21482798
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactt--tgttttggttgcttgattattactt 98  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||  | |||||||||||| ||||| ||||    
T  21482648 tttcgtgtgttctctctttcttttctctcgctgttttctactttt-gtttgtgattataacttccatacactttattttttggttgcttcattatcactt 21482746  T
Q  99 gctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  21482747 gctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 149
Target Start/End: Original strand, 21480841 - 21480990
Alignment:
Q  2 ttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttg--ttttggttgcttgattattacttg 99  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||  ||||||||| |||||| | ||||     
T  21480841 ttcgtgtgttctctctttcttttctctcgttgttttcttctttt-gtttgtgattataacttccatacactttgttttttggttgtttgattgtcactta 21480939  T
Q  100 ctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| | ||||| |||| | ||||||||||||||||||||    
T  21480940 ctccacacatcaagtttattattggtgttatttttcatcgaattcacaaca 21480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 3005579 - 3005486
Alignment:
Q  55 ttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3005579 ttataacttccatacactttgttt-ggttgtttgattattacttgctccacacatcaagtattttattggtgtgattttcatcgaattcacaaca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 15956312 - 15956443
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||||||| |||| |||  ||||||||||||||||||| |     
T  15956312 ttcttttctctcgttgttttctactttcg-tttgtgattataactttcatacactttgttttggttgtttgactatcccttgctccacacatcaagtttg 15956410  T
Q  118 ttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||  ||||| ||||||||||||||||||||    
T  15956411 ttattgatgtgatttttcatcgaattcacaaca 15956443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 25952864 - 25953010
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttc--catacactttgttttggttgcttgattattacttgctcc 103  Q
    ||||||||| |||||||||||||||  ||||||||||||||| ||||| |||||| | |  |||||||||| |||||||||||||||||| |||| ||||    
T  25952864 tgtgttctctctttcttttctctcgccgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttctcc 25952963  T
Q  104 acacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  25952964 acacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 25953010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 15185704 - 15185564
Alignment:
Q  8 tgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacac 107  Q
    ||||||| |||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  15185704 tgttctctctttcttt-ctctcgttgttttctacttttg-tttatgattataacttccatacactttgttttggttgcttgactatcccttactccacac 15185607  T
Q  108 atcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||| | |||||  ||||| |||||| |||||||||||||    
T  15185606 atcaagtttgttattgatgtgatttttcaccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 27106874 - 27106754
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| | ||||    
T  27106874 tttctctcgttgttttctacttttg-tctgtgattataacttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttat 27106776  T
Q  122 ttgtgtgattt-tcatcgaatt 142  Q
    | ||||| ||| ||||||||||    
T  27106775 tggtgtgttttctcatcgaatt 27106754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 36865899 - 36866014
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    |||||||||||||||||||||||||| || || |||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||    
T  36865899 tttctctcgttgttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgtt 36865998  T
Q  120 atttgtgtgattttca 135  Q
    |||  |||| ||||||    
T  36865999 attgatgtggttttca 36866014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28251559 - 28251410
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| |||  ||||||||||   ||||||||||||| ||| ||||| |||||| |  ||||||||||||||||||||||| |||||||| |||||    
T  28251559 tgtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattattccttgc 28251460  T
Q  101 tccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||||||||| | ||||| ||||||  ||||||||||||||||||||    
T  28251459 tccacacatcaagt-tgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 14808123 - 14808234
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||   |||||||||||||||||| | ||||    
T  14808123 tctctcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccgttgctccacacatcaagtttgttat 14808222  T
Q  122 ttgtgtgatttt 133  Q
    | ||||||||||    
T  14808223 tggtgtgatttt 14808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 15073065 - 15073202
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||| |  |||||||||||||||||| |||||||| |||  |||||||||||||||||    
T  15073065 ttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccacacatcaa 15073164  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | ||||| |||||| |||||||||||||| |||||    
T  15073165 gtttgttattggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 27827359 - 27827479
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    |||||||||||||||||||||||||||| |||  ||||||||||||||||||| | ||||| |||||    
T  27827359 cgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 27827458  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  27827459 attttcatcgaattcgcaaca 27827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 43082347 - 43082450
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||    
T  43082347 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtg 43082445  T
Q  129 atttt 133  Q
    |||||    
T  43082446 atttt 43082450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 27829703 - 27829790
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  27829703 ttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcgcaaca 27829790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 35872434 - 35872301
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataactt--ccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||| ||||||||||||||||| ||||| |||||| ||  ||||||||||| ||||||||||||||||||  ||| || ||||||||||||     
T  35872434 ttcttttctctc-ttgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttcacacatcaagtt 35872336  T
Q  116 ttttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||||| ||| |||||||||||||||||    
T  35872335 tgttattggtgtgttttctcatcgaattcacaaca 35872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 4424392 - 4424512
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||| ||||||||||||||  ||||||||||||| ||||| | ||||| ||||    
T  4424392 cgttgttttctacttttggcttgtatttaattgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaagt-tgttattggtgt 4424490  T
Q  128 gattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||    
T  4424491 gattttcatcgaattcacaaca 4424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 14419163 - 14419035
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||  ||||| |||||| |  ||||||||||||||||||||| | ||||||| |||||||||| ||||||||| | ||||    
T  14419163 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcacttgctccatacatcaagtttgttat 14419064  T
Q  122 ttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||| |||||||||||||||||    
T  14419063 tggtgtgttttctcatcgaattcacaaca 14419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 28283182 - 28283062
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||   || |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  28283182 cgttgttttctacttttggcttgtatttatttttttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 28283084  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  28283083 atttttcatcgaattcgcaaca 28283062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 15809628 - 15809711
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  15809628 catacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttcatcgaattcgcaaca 15809711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 33541402 - 33541255
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| || ||||||||||||| ||||| |||||| |  |||||||||||| ||||| ||||||||||||  ||| |||    
T  33541402 tgtgttctctcttcctttctctctcgctgatttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatcccttactc 33541303  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| |||||| |||| |||||||||||||||    
T  33541302 cacacatcaagtttgttattggtgtgatttttgatcgaattcacaaca 33541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24873161 - 24873039
Alignment:
Q  29 cgttgttttctac-ttttggtttgtggttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    ||||||||||||| |||||| ||||  ||||||||| ||||||||||||||| |||||||| |||||  ||||||||||||||||||| | ||||| |||    
T  24873161 cgttgttttctaccttttggcttgtatttataactttcatacactttgtttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtg 24873063  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| ||||||||||||||||||||    
T  24873062 tgatttttcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 3874367 - 3874487
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||| ||||  ||||||||||||||||||| | ||||| |||||    
T  3874367 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttggttatctcttgctccacacatcaagt-tgttattggtgtg 3874465  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||||||||    
T  3874466 atttttcaacgaattcacaaca 3874487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 14477655 - 14477740
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  14477655 catacactttgttttggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 14477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 134
Target Start/End: Complemental strand, 30480476 - 30480364
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||  |||||| |  |||||||||||||||||||||||||||||||| ||| ||||||||||||| | | ||||    
T  30480476 tctctcgctgttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattccttactccacacatcaaatttgttat 30480377  T
Q  122 ttgtgtgattttc 134  Q
    | |||| ||||||    
T  30480376 tggtgtcattttc 30480364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 37214237 - 37214109
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  || ||||||||||||||||||||||| ||||  ||| ||||| ||||||||| | ||||    
T  37214237 tctctcgttgttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctcttactccatacatcaagtttgttat 37214138  T
Q  122 ttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||| ||||| |||||||||||    
T  37214137 tggtgtgttttctcatcaaattcacaaca 37214109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 15068335 - 15068472
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||| ||||| || ||| |  ||||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  15068335 ttcttttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaa 15068434  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | || || |||||| |||||||||||||| |||||    
T  15068435 gtttgttgttggtgtgatttttcatcgaattcgcaaca 15068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 41383005 - 41383154
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| ||| |||||||||||   ||||||||||||| ||| ||||| |||||| |  |||||| ||||||||||| ||||||||||||  |||||    
T  41383005 tgtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattatctcttgc 41383104  T
Q  101 tccacacatcaagtattttatttgtgt-gattttcatcgaattcacaaca 149  Q
    |||||||||||||| | ||||| |||| | ||||||||||| || |||||    
T  41383105 tccacacatcaagtttgttattggtgtggtttttcatcgaactcgcaaca 41383154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 43079976 - 43080079
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  ||||||||| ||||||||||||||||||||||| |||||   |||||||||||||||||| | ||||| |||||    
T  43079976 cgttgttttctacttttgacttgtatttataactttcatacactttgttttggttgcttaattatccattgctccacacatcaagt-tgttattggtgtg 43080074  T
Q  129 atttt 133  Q
    |||||    
T  43080075 atttt 43080079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 3883556 - 3883434
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||   |||||||||||||||||| | |||||  ||||    
T  3883556 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagt-tgttattgatgtg 3883458  T
Q  129 a-ttttcatcgaattcacaacact 151  Q
    | |||||||||||||| |||||||    
T  3883457 atttttcatcgaattcgcaacact 3883434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 43530491 - 43530609
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga- 129  Q
    ||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||     
T  43530491 ttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgat 43530589  T
Q  130 ttttcatcgaattcacaaca 149  Q
    ||||||| |||||| |||||    
T  43530590 ttttcattgaattcgcaaca 43530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 27911441 - 27911567
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  |||| |||||||||||| ||| ||  ||||| |||||||||||||||||||| ||||||    
T  27911441 tctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttcta-attatcacttgctccacacatcaagttttttat 27911538  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||| | |||||||||||    
T  27911539 tggtgtgatttttcaacaaattcacaaca 27911567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 27957860 - 27957986
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  |||| |||||||||||| ||| ||  ||||| |||||||||||||||||||| ||||||    
T  27957860 tctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttcta-attatcacttgctccacacatcaagttttttat 27957957  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||| | |||||||||||    
T  27957958 tggtgtgatttttcaacaaattcacaaca 27957986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 32339716 - 32339803
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||| ||||||||||||||||||  ||||| ||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  32339716 ttccatacactttgattttggttgcttgattatcccttgccccacacatcaagt-tgttattggtgtgattttcatcgaattcgcaaca 32339803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 609109 - 609230
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgtttt--ggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    ||||||||||||||||||| ||||  |||    || |||||||||||||||  ||||||||||||||  |||||||||| |||||||| | ||||| |||    
T  609109 cgttgttttctacttttggcttgtatttaattgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaagt-tgttattggtg 609207  T
Q  127 tgattttcatcgaattcacaaca 149  Q
     ||||||||||||||||||||||    
T  609208 cgattttcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 18811085 - 18811202
Alignment:
Q  33 gttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-t 130  Q
    ||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| |    
T  18811085 gttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatt 18811183  T
Q  131 tttcatcgaattcacaaca 149  Q
    ||||||||||||| |||||    
T  18811184 tttcatcgaattcgcaaca 18811202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 44721217 - 44721318
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  44721217 cgttgttttctacttttgacttgtatttaattattccatacactttgttttggttgcttgattatcccttactccacacatcaagt-tgttattggtgtg 44721315  T
Q  129 att 131  Q
    |||    
T  44721316 att 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 181833 - 181901
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttg 84  Q
    |||||||||||||||||||||||||||||| ||||| ||||||   || ||||||||||||||||||||    
T  181833 ttcttttctctcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 31578202 - 31578128
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacactttg 154  Q
    |||||||||||||||||  ||||| |||||||||||||||||||| |||||||||| | |||||| |||||| ||||    
T  31578202 ttggttgcttgattatt--ttgctacacacatcaagtattttattcgtgtgatttttaacgaattgacaacaatttg 31578128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 1225521 - 1225626
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    ||||||||||||| |||||||||||||||  ||||| |||||| |         ||||||||||||||||||||||| |||| ||||||||||||||||     
T  1225521 ttcttttctctcgctgttttctacttttgacttgtgtttataattg--------tttgttttggttgcttgattattccttgttccacacatcaagtatg 1225612  T
Q  118 ttatttgtgtgatt 131  Q
    ||||| | ||||||    
T  1225613 ttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 31035553 - 31035604
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacact 151  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  31035553 ctccacacatcaagtattttattggtgtgatttttaacgaattcacaacact 31035604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 18813259 - 18813376
Alignment:
Q  33 gttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-t 130  Q
    ||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||| ||| ||||||| | ||||| |||||| |    
T  18813259 gttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctctacatatcaagt-tgttattggtgtgatt 18813357  T
Q  131 tttcatcgaattcacaaca 149  Q
    ||||||||||||| |||||    
T  18813358 tttcatcgaattcgcaaca 18813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 22684614 - 22684491
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    ||||||| |||||| |||||||||| |||||||  ||||||||||||||||||| | ||||| ||||    
T  22684614 cgttgttttctacttttggcttgtatttaattgttccataaactttgattttggttgcctgattatcccttgctccacacatcaagt-tgttattggtgt 22684516  T
Q  128 gatttt---catcgaattcacaaca 149  Q
    ||||||   |||||||||| |||||    
T  22684515 gattttttccatcgaattcgcaaca 22684491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 16833954 - 16834024
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||||  ||| | |||||||||||||||||||| |||||| |||||| |||||||||||||    
T  16833954 ttggttgcttgattatt--ttgtttcacacatcaagtattttattggtgtgacttttcaacgaattcacaaca 16834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 2467833 - 2467781
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||| ||||||||| | ||||| ||||||||||||||||||||||||||    
T  2467833 ttgctccatacatcaagtttattattagtgtgattttcatcgaattcacaaca 2467781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 2467932 - 2467880
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||| ||||||    
T  2467932 ttgctccacacatcaagtttattattggtgtgattttcatcgaattgacaaca 2467880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 5372157 - 5372043
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataac--ttccatacacttt-gttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    |||||||| ||||||||||||||||| ||| | |||||||  ||||||||| |||  |||| ||||||||| |||   |||||||||||||||||| | |    
T  5372157 tttctctcattgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgt 5372058  T
Q  119 tatttgtgtgatttt 133  Q
    ||||  |||||||||    
T  5372057 tattgatgtgatttt 5372043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 41385114 - 41385233
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacacttt-gttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||| ||||||||| ||||| |||||| |  |||||||||||| |||||||||| ||||||||  ||||||||||    ||||| | |||||||||    
T  41385114 gttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac----caagtttgttatttgtg 41385209  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| ||||||| |||||| |||||    
T  41385210 tgatttttcatggaattcgcaaca 41385233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 13985008 - 13984934
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||| ||||| |  || ||||||||||| ||||||||||| |||||||||| | ||||||| |||||    
T  13985008 ttgttttggttgctcgattaat--tttctccacacatctagtattttattggtgtgatttttaacgaattcgcaaca 13984934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 6376481 - 6376533
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||| ||||||||||||||| ||| |||||||| | |||||||||||    
T  6376481 ttgctccacaaatcaagtattttattggtgcgattttcaacaaattcacaaca 6376533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 3898936 - 3898971
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttca 135  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3898936 ctccacacatcaagtattttattggtgtgattttca 3898971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 183256 - 183310
Alignment:
Q  96 cttgctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  183256 cttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 17847927 - 17848002
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||| |  ||  |||||||||||||||||||||| |||||| |||| | |||||||||||||    
T  17847927 ttgttttggttgcttaattaattttt--tccacacatcaagtattttattggtgtgattttttaacgaattcacaaca 17848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 31566476 - 31566411
Alignment:
Q  81 gttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaac 148  Q
    |||| |||||||||  |||||||| | ||||||||||||||| |||||||||| | | ||||||||||    
T  31566476 gttgtttgattatt--ttgctccatagatcaagtattttattggtgtgatttttaacaaattcacaac 31566411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18800571 - 18800426
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  18800571 tttcgtgtgttctctttttgttttctctcgttgttttctacttttggcttgtgtttataacttccatacactttgttttgattgcttgattattatttgc 18800472  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcaca 146  Q
    || |||||||||||||||| || |||||||||||||||||||||||    
T  18800471 tctacacatcaagtattttgttggtgtgattttcatcgaattcaca 18800426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 14183579 - 14183455
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattt 123  Q
    |||||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  14183579 tctctcgttgttttcttcttttgctt-gtgtttataacttccatacactttgttttggttgcttgattattacttgcttcacacatcaagtattttattg 14183481  T
Q  124 gtgtgattttcatcgaattcacaaca 149  Q
    |||||||||| |||||||||||||||    
T  14183480 gtgtgatttttatcgaattcacaaca 14183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 16429256 - 16429387
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |     
T  16429256 ttcttttctctcgctgttttc-acttttggtttgtgtttataacttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttg 16429354  T
Q  118 ttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||| |||||| ||||||||||||||||||||    
T  16429355 ttattggtgtgatttttcatcgaattcacaaca 16429387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 30790357 - 30790249
Alignment:
Q  42 ttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaat 141  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  30790357 tttttgtttgtgtttataacttccatacactttgttttggttgcttgattattacttgcttcacacatcaggtattttattggtgtgattttcatcgaat 30790258  T
Q  142 tcacaacac 150  Q
    |||||||||    
T  30790257 tcacaacac 30790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 15916681 - 15916821
Alignment:
Q  9 gttctcgctttcttttctctcgttgtttt-ctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacac 107  Q
    |||||| ||||||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15916681 gttctctctttctttt-tctcgctgtttttctacttttggcttgtgtttataacttccatacactttgttttggttgcttgattgttacttgctccacac 15916779  T
Q  108 atcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| |||||| |||||| ||||||||||||||||||||    
T  15916780 atcaagta-tttattggtgtgacttttcatcgaattcacaaca 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 17186121 - 17185979
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  17186121 tgtgttctctctttcttt-ctctcgctgttttctacttttg-tttgtgattataacttccatacactttgttttggttgcttgactatcacttgctccac 17186024  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | ||||||| | ||||| |||||| |||||||| |||||||||||    
T  17186023 atatcaagtttattattggtgtgatttttcatcaaattcacaaca 17185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 8349046 - 8348905
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    |||||||||| |||||||| ||||  |||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  8349046 gtgtgttctctctttcttt-ctctaattgttttctacttttg-tttgtgtttataacttccatacactttgttt-ggttgcttgattattacttgttcca 8348950  T
Q  105 cacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||| |||||| ||||||| |||||| ||||||||||||||||||||    
T  8348949 cacgtcaagt-ttttattggtgtgatttttcatcgaattcacaaca 8348905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 15669386 - 15669246
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| ||||||||||||||| ||| || |||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||| ||||| |||    
T  15669386 tgtgttctctctttcttttctctcgctgtgttatacttttg-tttgtgtttataacttcgatacactttgttttgattgcttgattattatttgcttcac 15669288  T
Q  106 acatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||| |||||||   ||||||||||||||||||||| ||||    
T  15669287 acatcaaatatttta--ggtgtgattttcatcgaattcaaaaca 15669246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 39932398 - 39932514
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttt 132  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| |||    
T  39932398 ttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttt 39932497  T
Q  133 tcatcgaattcacaaca 149  Q
    |||||||||||||||||    
T  39932498 tcatcgaattcacaaca 39932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 40134247 - 40134378
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgat--tattacttgctccacacatcaagtattt 118  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||||||| | |    
T  40134247 ttttctctcgttgttttctacttttggcttgagattataacttccatacactttgttttggttgcctgattatatcacttgctccacacatcaagtttgt 40134346  T
Q  119 tatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||  ||||| ||||||||||||||||||||    
T  40134347 tattgatgtgatttttcatcgaattcacaaca 40134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 50078764 - 50078635
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  50078764 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttat 50078665  T
Q  122 ttgtgtgattt--tcatcgaattcacaaca 149  Q
    | |||||||||  ||||||||||| |||||    
T  50078664 tggtgtgattttctcatcgaattcgcaaca 50078635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 9459397 - 9459277
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  9459397 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 9459299  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  9459298 atttttcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 9463224 - 9463104
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  9463224 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 9463126  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  9463125 atttttcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 2949226 - 2949079
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||| ||||||||||||||||||  |||||||    
T  2949226 tgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatcccttgctc 2949127  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  2949126 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 28842812 - 28842931
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  28842812 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttactccacacatcaagt-tgttattagtgtg 28842910  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  28842911 attttcatcgaattcgcaaca 28842931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 50248564 - 50248417
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||||||||||| |||||||| |||||||||||| |  |||||||||||||||||||||||||||||||  ||| |||    
T  50248564 tgtgttctctcttcctttctctctcgttgttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatcccttactc 50248465  T
Q  103 cacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    |||||||||| | | ||||| ||||||||| |||||||||||||||||    
T  50248464 cacacatcaaatttgttattggtgtgatttatcatcgaattcacaaca 50248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 16428952 - 16429043
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacat 109  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  16428952 ttcttttctctcgatgttttctacttttggtttgtgtttataacttctatacactttgttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 25251268 - 25251123
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||||||||||||||||||| ||||| |||||| |  | ||||||||||||||||||||||||| |||  |||||||    
T  25251268 tgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatcccttgctc 25251169  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaa 147  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||    
T  25251168 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 25251123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 3579550 - 3579431
Alignment:
Q  32 tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||| ||||| |||||| |  |||||||||||| |||||||||| ||||||| |||||||||||||||||||| | ||||| |||||     
T  3579550 tgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgt 3579451  T
Q  130 ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||    
T  3579450 ttttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 26519385 - 26519293
Alignment:
Q  50 tgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcac 145  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  26519385 tgtgtttataacttccatacactttgttt-ggttgcttgattattacttgctccacaca--aagtattttattggtgtgattttcatcgaattcac 26519293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 9241077 - 9240937
Alignment:
Q  8 tgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||  |||||| |  | ||||||||||||||||||||||||||||| |||||||||||    
T  9241077 tgttctctctttcttt-ctctcgctgttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcacttgctccac 9240979  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcaca 146  Q
    || |||||| | ||||| |||||| |||| ||||||||||||    
T  9240978 acttcaagtttgttattggtgtgattttttatcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 16226486 - 16226607
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  16226486 cgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 16226584  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  16226585 gatttttcatcgaattcacaaca 16226607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 6115085 - 6114952
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    ||||||||||||||||| |||||||||||  ||||  |||||||||||||||| ||| |||||||||||||||||| |||| |||||||||||||||||     
T  6115085 ttcttttctctcgttgtcttctacttttgacttgtatttataacttccatacattttattttggttgcttgattatcactttctccacacatcaagtata 6114986  T
Q  118 ttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||   |||||| ||||||| ||||||| |||||    
T  6114985 ttaccggtgtgatttttcattgaattcataacac 6114952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 23816186 - 23816323
Alignment:
Q  17 tttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatca 111  Q
    ||||||||||||||   ||||||||||||||||  ||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23816186 tttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccacacatca 23816285  T
Q  112 agtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||| | ||||| |||||| |||||||||||||| |||||    
T  23816286 agt-tgttattggtgtgatttttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 13447236 - 13447117
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  13447236 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 13447138  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  13447137 attttcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 4131350 - 4131221
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||  |||||||| |||||||||| | ||||    
T  4131350 tctctcgttgttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgctccgcacatcaagtttgttat 4131251  T
Q  122 ttgtgtga--ttttcatcgaattcacaaca 149  Q
    | ||||||  |||||||||||||| |||||    
T  4131250 tggtgtgagtttttcatcgaattcgcaaca 4131221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 17319193 - 17319323
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| | |||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||| ||| ||||||||||||| | | ||||    
T  17319193 tctctcgctattttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattccttactccacacatcaaatttgttat 17319292  T
Q  122 ttgtgtga-ttttcatcgaattcacaacact 151  Q
    | ||| || ||||||||||||||||||||||    
T  17319293 tggtgcgatttttcatcgaattcacaacact 17319323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 16231881 - 16232002
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||   |||||||||||||||||| | ||||| ||||    
T  16231881 cgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatccgttgctccacacatcaagt-tgttattggtgt 16231979  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  16231980 gatttttcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 13358891 - 13359011
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||| |||||||||||||| |||  ||| ||||||||||||||| | ||||| ||||    
T  13358891 cgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgactatcccttactccacacatcaagt-tgttattggtgt 13358989  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  13358990 gattttcatcgaattcgcaaca 13359011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28207062 - 28206912
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| ||||||| |||||    
T  28207062 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttg 28206963  T
Q  100 ctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  28206962 ctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 28206912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 13215373 - 13215520
Alignment:
Q  8 tgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctcca 104  Q
    ||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||| |||| |||  |||||||||    
T  13215373 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctcca 13215472  T
Q  105 cacatcaagtattttatttgtgtgattt-tcatcgaattcacaacact 151  Q
    |||||||||| | ||||| ||||| ||| ||| |||||||||||||||    
T  13215473 cacatcaagtttattattggtgtgttttctcaacgaattcacaacact 13215520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 15294797 - 15294678
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  15294797 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 15294699  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||| || |||||    
T  15294698 attttcatcgaaatcgcaaca 15294678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 16432705 - 16432813
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttt 132  Q
    ||||||||||||||||| || ||||||||| |||||||| ||||||| |||| |||||||||||||||||||||||||| | | ||||| |||||| |||    
T  16432705 ttttctacttttggtttatgtttataactttcatacactgtgttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtgatttt 16432804  T
Q  133 tcatcgaat 141  Q
    |||||||||    
T  16432805 tcatcgaat 16432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 47906568 - 47906704
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  47906568 ttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatctcttgctccacacatcaa 47906667  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | ||||| |||||| |||||||||||||| |||||    
T  47906668 gt-tgttattggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 51750357 - 51750476
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  51750357 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 51750455  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||| ||||||||| |||||    
T  51750456 atttttatcgaattcgcaaca 51750476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 38925464 - 38925328
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg--ttttggttgcttgattattacttgctccacacatcaag 113  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||   ||||||||||||||  |||||||||| ||||||| |||| ||||||||||||||    
T  38925464 ttcttttctctcattgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaag 38925365  T
Q  114 tattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    | | ||||| ||||| ||| ||||| |||||||||||    
T  38925364 tttattattggtgtgttttctcatcaaattcacaaca 38925328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 18839894 - 18840022
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| ||||||||| |||||| ||||| |||||| |  |||||||||||||||| | || |||||||||| ||||||||||||||||||| | ||||    
T  18839894 tctctcgctgttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattccttgctccacacatcaagtttgttat 18839993  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||||||||| |||||    
T  18839994 tggtgtgatttttcatcgaattcgcaaca 18840022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 28840997 - 28841082
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  28840997 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccactcatcaagt 28841082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 8347271 - 8347143
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| || ||| ||||||||||||||| ||  || ||||||||| |||| ||||||||| ||||||||||||||||||| |    
T  8347271 tttcgtgtgttctctctttcttt-ctatcgctgttttctacttttgctta-tgtttataactttcatatactttgttt-ggttgcttgattattacttac 8347175  T
Q  101 tccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||| ||||||||| |||| ||||||||||||    
T  8347174 tccacgcatcaagta-tttacttgtgtgatttt 8347143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 13125456 - 13125327
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||| ||||||||| ||||  |||||||||||||||||||||||| | ||||| ||||||||  ||  ||| ||||||||||||||||||||||  ||||    
T  13125456 tttcatgtgttctctcttttctttctctcgttgttttctactttt-gcttgtgtttataactgtcacccac-ttgttttggttgcttgattatt-tttgc 13125360  T
Q  101 tccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||||||||||||| |||||| ||||||||||    
T  13125359 tccacacatcaagtaatttattggtgtgatttt 13125327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 28998231 - 28998094
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg---ttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||||||||||||||||||| ||||| ||||||   ||||||||||||||    ||||||||| ||||||| ||||||||||||||||||    
T  28998231 ttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaa 28998132  T
Q  113 gtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    || | | ||| ||||| ||| || ||||||||||||||    
T  28998131 gtttgtcattggtgtgttttctcttcgaattcacaaca 28998094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 29003947 - 29003810
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg---ttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||||||||||||||||||| ||||| ||||||   ||||||||||||||    ||||||||| ||||||| ||||||||||||||||||    
T  29003947 ttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaa 29003848  T
Q  113 gtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    || | | ||| ||||| ||| || ||||||||||||||    
T  29003847 gtttgtcattggtgtgttttctcttcgaattcacaaca 29003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 6995662 - 6995540
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| |||||  |  |||||||||||||||||| |||||||| |||  ||||||||||||||||||| | ||||| ||||    
T  6995662 gttgttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtttgttattggtgt 6995563  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  6995562 gatttttcatcgaattcgcaaca 6995540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 11457450 - 11457328
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| ||| || |  |||||| |||||||||||||||| ||||||| ||||||| |||||||||||| | ||||    
T  11457450 tctctcgctgttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcacttgcttcacacatcaagtttgttat 11457351  T
Q  122 ttgtgtga-ttttcatcgaattc 143  Q
    | |||||| ||||||||||||||    
T  11457350 tggtgtgatttttcatcgaattc 11457328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 30780361 - 30780482
Alignment:
Q  33 gttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc--cacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||| |||||| |||||| |  | |||||||||||||||||||||||||||||| ||| |||  |||||||||||| | ||||| |||||    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtg 30780460  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  30780461 agttttcatcgaattcacaaca 30780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 14097963 - 14097815
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| |||||||||||||||||||||||  ||||| |||||| |  ||||||||||||| ||||||||||||||||||  ||||||    
T  14097963 tgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgct 14097864  T
Q  102 ccacacatcaagtattttatttgtgtg-attttcatcgaattcacaaca 149  Q
     |||||||||||| | ||||| |||||  ||||| |||||||| |||||    
T  14097863 tcacacatcaagtttgttattggtgtgttttttcttcgaattcgcaaca 14097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 18307396 - 18307544
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||| | ||||| | ||||||    
T  18307396 tgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcatttgctc 18307495  T
Q  103 cacacatcaagtattttatttgtgtgattt-tcatcgaattcacaacac 150  Q
    |||||||||||| | |||||  |||  ||| ||||||||||| ||||||    
T  18307496 cacacatcaagtttgttattgatgtattttctcatcgaattcgcaacac 18307544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 25248526 - 25248398
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||  || || |||||| |  | ||||||||||||||||||||||||| |||| ||| ||||||||||||||| | ||||    
T  25248526 tctctcgctgttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattccttactccacacatcaagtttgttat 25248427  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    |  ||||| ||||||||||||||||||||    
T  25248426 tgttgtgatttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 27336934 - 27336782
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  ||||    
T  27336934 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttg 27336835  T
Q  100 ctccacacatcaagtattttatttgtgtgattt---tcatcgaattcacaaca 149  Q
    ||||||||||||||| | |||||  ||||||||   ||| |||||||||||||    
T  27336834 ctccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaaca 27336782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 50307539 - 50307389
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| ||||||   |||||||||||||| |||||||||| |||||||  ||||    
T  50307539 tgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttg 50307440  T
Q  100 ctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||| ||||||||| | ||||| |||||| |||||||||||||| |||||    
T  50307439 ctccagacatcaagtttattattggtgtgatttttcatcgaattcccaaca 50307389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 13762154 - 13762276
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  13762154 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatccctttctccacacatcaagt-tgttattggtgtg 13762252  T
Q  129 attt--tcatcgaattcacaacac 150  Q
    ||||  ||||||||||| ||||||    
T  13762253 attttctcatcgaattcgcaacac 13762276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 51752723 - 51752805
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  51752723 catacactttgttttggttgcttgattatcccttgctccacacat-aagt-tattattggtgtgattttcatcgaattcacaaca 51752805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 51757886 - 51757973
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||| | ||||||||||||||||||||    
T  51757886 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtcatttttcatcgaattcacaaca 51757973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 23786191 - 23786280
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacact 151  Q
    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||    
T  23786191 ttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaacact 23786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 39462806 - 39462957
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   |||||||||| |||||| ||||| |||||| |  ||||||||||||| ||||| |||| |||||||  ||||    
T  39462806 tgtgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttg 39462905  T
Q  100 ctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    ||||||||||||||| | ||||| |||||| |||||||||||||| ||||||    
T  39462906 ctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacac 39462957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 47451930 - 47452065
Alignment:
Q  20 cttttctctcgttgtt---ttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||   |||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  ||||||| ||||||||| |    
T  47451930 cttttctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgacacatcaaat 47452029  T
Q  115 attttatttgtgtga-ttttcatcgaattcacaaca 149  Q
     | |||||  ||||| ||||||| ||||||||||||    
T  47452030 ttgttattgatgtgatttttcattgaattcacaaca 47452065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 10399791 - 10399668
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  10399791 cgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgt 10399693  T
Q  128 g--attttcatcgaattcacaacac 150  Q
    |  ||||||||||||||| ||||||    
T  10399692 gatattttcatcgaattcgcaacac 10399668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 12302480 - 12302368
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    |||||||||||||||||||||||  ||||| |||||| |  ||||||||||||| |||||||| | ||||||| |||||||||||||||||||| | |||    
T  12302480 tctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgtta 12302381  T
Q  121 tttgtgtgatttt 133  Q
    || ||||| ||||    
T  12302380 ttggtgtgttttt 12302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 17324388 - 17324472
Alignment:
Q  32 tgttttctacttttggtttgtggttataacttc--catacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    |||||||||||||||| ||||| |||||| ||   ||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  17324388 tgttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccacacatcaagt 17324472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 20291774 - 20291894
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||| ||| |||||||| |||||||||  ||||||||||||||||||| | ||||| ||||    
T  20291774 cgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccacacatcaagt-tgttattggtgt 20291872  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  20291873 gattttcatcgaattcgcaaca 20291894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 27339125 - 27338973
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  ||||    
T  27339125 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttg 27339026  T
Q  100 ctccacacatcaagtattttatttgtgtgattt---tcatcgaattcacaaca 149  Q
     |||||||||||||| | |||||  ||||||||   ||| |||||||||||||    
T  27339025 ttccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaaca 27338973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 31424990 - 31424862
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataactt--ccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||  ||||| |||||| |   ||||||| |||||| ||||||||||| |||| ||||||||||||||||||| | ||||    
T  31424990 tctctcgctgttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttgagtattccttgctccacacatcaagtttgttat 31424891  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| ||||||| |||||| |||||    
T  31424890 tggtgtgatttttcattgaattcgcaaca 31424862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 31490226 - 31490345
Alignment:
Q  32 tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||  ||||| |||||| |  | |||||||||| ||||||||||||||||||  ||||||||||||||||||| || |||| ||||||    
T  31490226 tgttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctcttgctccacacatcaagt-ttgtattggtgtga 31490324  T
Q  130 -ttttcatcgaattcacaaca 149  Q
     |||||||||||||| |||||    
T  31490325 tttttcatcgaattcgcaaca 31490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 46431668 - 46431548
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||| |||||||||||||||||||||||  ||||||||| ||||||||| | ||||| |||||    
T  46431668 cgttgttttctacttttggcttgtatttaattgttccatacgctttgttttggttgcttgattatctcttgctccaaacatcaagt-tgttattggtgtg 46431570  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  46431569 atttttcatcgaattcgcaaca 46431548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 2617836 - 2617955
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  |||||| |||||||||||| | ||||| |||||    
T  2617836 gttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaagt-tgttattggtgtg 2617934  T
Q  129 attttcatcgaattcacaaca 149  Q
     |||||||||||||| |||||    
T  2617935 gttttcatcgaattcgcaaca 2617955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 31735452 - 31735365
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||| |||| ||||||||||| |||||    
T  31735452 ttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtaatttctcatcgaattcgcaaca 31735365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 16561825 - 16561892
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  16561825 ttggttgcttgattatt--tttctccacacatcaagtattttattggtgtgattttcatcgaaatcacaa 16561892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 26332490 - 26332392
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||||| |||||| ||||||||  ||  ||  |||||||| |||||||||||||  ||||||||||||||||||||||||    
T  26332490 ttttctcccgttgttttctacttttg-tttgtgtttataactatcacccatgttgttttgattgcttgattatt--ttgctccacacatcaagtatttta 26332394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 20302759 - 20302879
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||| ||| |||||||| |||||||||  ||||||||| ||||||||| | ||||| ||||    
T  20302759 cgttgttttctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccagacatcaagt-tgttattggtgt 20302857  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  20302858 gattttcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 41647207 - 41647355
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||||| | |||||||||||||||  ||||| ||||||   || ||||||||||| |||||||||  ||||||| |||||||    
T  41647207 tgtgttctctcttcctttctctcttgctgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgct 41647306  T
Q  102 ccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    || |||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  41647307 ccgcacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 41647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 24326014 - 24326101
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||  |||||||||||||||||  ||| ||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  24326014 ttccatacactttactttggttgcttgattatcccttactccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 50076666 - 50076563
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctcc 103  Q
    ||||||||| |||  |||||||||||||||||||||||||   ||||| |||||| |  ||||||||||||||||| ||||||| ||||||  |||||||    
T  50076666 tgtgttctctcttctttttctctcgttgttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattattcattgctcc 50076567  T
Q  104 acac 107  Q
    ||||    
T  50076566 acac 50076563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 28279641 - 28279695
Alignment:
Q  95 acttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  28279641 acttgctccacacatcaagtattttattggtgtgatttttaacgaattcacaaca 28279695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 31422835 - 31422706
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggtt-ataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||  ||||| || |||| |  ||| |||||||| |||| |||| ||||||||| ||||||||||||||||||| | |||    
T  31422835 tctctcgctgttttctacttttgacttgtgttttataattattccgtacactttattttagttgattgattattccttgctccacacatcaagtttgtta 31422736  T
Q  121 tttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||  ||||| |||||||||||||| |||||    
T  31422735 ttgatgtgatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 47177680 - 47177801
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  47177680 cgttgttttctacttttggcttgtatttaattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 47177778  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||| |||||||||||||||    
T  47177779 gatttttgatcgaattcacaaca 47177801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 25128179 - 25128271
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||| ||||||||||||||  |||||| |||||| | | || ||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  25128179 tttctctcgctgttttctactttta-tttgtgattataattgctatccactttgattttggttgcttgattattccttgctctacacatcaagt 25128271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 26613164 - 26613094
Alignment:
Q  77 tttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||| |||||||||| | |||||||||||||    
T  26613164 tttggttgcttgattatt--ttgctccacacgtcaagtatttcattggtgtgatttttaacgaattcacaaca 26613094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 10116120 - 10116200
Alignment:
Q  68 acactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacac 150  Q
    |||| |||||||||||  ||||||| |  |||||||||||||||||||||||||| |||||||||| | |||||||| |||||    
T  10116120 acacgttgttttggttatttgattaat--ttgctccacacatcaagtattttattggtgtgatttttaacgaattcaaaacac 10116200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 15823861 - 15823967
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||  ||||| |||||| |  ||||||||||||| |||||||||| ||||||   ||| ||||||||||||||| | ||||| |||    
T  15823861 gttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtg 15823960  T
Q  127 tgatttt 133  Q
    |||||||    
T  15823961 tgatttt 15823967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 2510272 - 2510184
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt--catcgaattcacaaca 149  Q
    |||||||||||||||||| |||||||||||||  |||||| |||| ||||||| | ||||| ||||||||||  || |||||||||||||    
T  2510272 ttccatacactttgttttcgttgcttgattatctcttgcttcacatatcaagt-tgttattggtgtgattttcacaacgaattcacaaca 2510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 17324614 - 17324482
Alignment:
Q  18 ttcttttctctcgttgttttctacttt-tggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||| ||||||||||||| ||| || || |||||| |  || || ||||||||| ||| ||||||| |||  ||| |||||||||||||||    
T  17324614 ttcttttctctcgctgttttctactttctggcttatgattataattgttctattcactttgttatggctgcttgactatcccttactccacacatcaagt 17324515  T
Q  115 attttatttgtgtga--ttttcatcgaattcac 145  Q
     | ||||| ||||||  ||||||||||||||||    
T  17324514 ttgttattggtgtgagtttttcatcgaattcac 17324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 42922517 - 42922608
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgct 101  Q
    ||||||| || |||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||   || ||||  ||||||||||||||||||||    
T  42922517 gtgtgttatctctttcttt-ctcccgttgttttctactttt-gtttgtgtttataacttccatac---tttttttttttgcttgattattacttgct 42922608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 47180031 - 47180152
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| ||||| |||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  47180031 cgttgttttctacttttggcttgtatttaattattccatacgctttgattttgattgcttaattatcccttgctccacacatcaagt-tgttattggtgt 47180129  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||| |||||||||||||||    
T  47180130 gatttttgatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 13433508 - 13433582
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||| |  |||||||||| || |||||||||||| ||||| ||||||  ||||||||||||    
T  13433508 ttgttttggttgcttgattaat--ttgctccacagattaagtattttattggtgtggttttcaaagaattcacaaca 13433582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 25860371 - 25860252
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||    | |||  ||||||||||||||||||| |  |||| ||||    
T  25860371 gttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttg----actatcccttgctccacacatcaagtttgatattggtgt 25860276  T
Q  128 gatttt--catcgaattcacaaca 149  Q
    | ||||  || |||||||||||||    
T  25860275 ggttttcacaacgaattcacaaca 25860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 26520117 - 26520061
Alignment:
Q  3 tcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttata 59  Q
    |||||||||||| ||||||||||||||| |||||||||||||| | ||||| |||||    
T  26520117 tcgtgtgttctctctttcttttctctcgctgttttctacttttagcttgtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 43104548 - 43104617
Alignment:
Q  80 ggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacact 151  Q
    |||||||||||||||  ||||| |||| ||||| ||||||||| |||| ||||||||| |||||||||||||    
T  43104548 ggttgcttgattatt--ttgcttcacatatcaaatattttattggtgtaattttcatcaaattcacaacact 43104617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13127686 - 13127575
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||| ||||||||| ||||  ||| |||| ||||||||| |||||| || ||| ||||||||  ||  ||||| ||||||||||||||||||||  ||||    
T  13127686 tttcatgtgttctctcttttctttatctcattgttttctccttttgctt-gtgtttataactgtcacccactt-gttttggttgcttgattatt-tttgc 13127590  T
Q  101 tccacacatcaagta 115  Q
    |||||||||||||||    
T  13127589 tccacacatcaagta 13127575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 13426838 - 13426792
Alignment:
Q  108 atcaagtattttatttgtgtgattttcatcgaattcacaacactttg 154  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  13426838 atcaagtattttattggtgtgattttcaacgaattcacaacaatttg 13426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 155984 - 156095
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    ||||||||||  | ||||||||| |||||| ||||| ||||||||  ||  ||||| ||||| ||| |||||||| |  || ||||||||||||||||||    
T  155984 ttcttttctccagctgttttcta-ttttggcttgtgtttataactgtcacccactt-gttttagttacttgattact--tttctccacacatcaagtatt 156079  T
Q  118 ttatttgtgtgatttt 133  Q
    ||||| ||||||||||    
T  156080 ttattggtgtgatttt 156095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1639 - 1493
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1639 tttcgtgtgttctctctttcttttctctcattgttttctacttttggcttgtgtttataacttccatacactttg-tttggttgcttgattattacttgc 1541  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||| || |||||| ||||||||||||| ||||||||||||    
T  1540 tccacacatcaaata-tttattggtgtgattttcattgaattcacaaca 1493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 2e-52; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 6661182 - 6661038
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6661182 tttcgtgtgttctc--tttcttttctctcgttgttttctacttttgctt-gtgtttataacttccatacactttattttggttgcttgattattacttgc 6661086  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaac 148  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  6661085 tccacacatcaaatatttaattggtgtgattttcatcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 20054124 - 20054266
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||||||||| | |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  20054124 tgtgttctctctttcttttctctcttcgttttctacttttg-tttgtgtttataactttcatacactttgttttggttgcttgattattacttgctctac 20054222  T
Q  106 acatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||| |||||||||| |||||||||||||||    
T  20054223 acatcaagtattttattagtgtgatttttatcgaattcacaaca 20054266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 10587133 - 10587252
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||||| |||||    
T  10587133 cgttgttttctacttttgacttgtatttataacttccatacactttgttttggttgcttgatta-tccttgctccacacatcaagtttgttattggtgtg 10587231  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  10587232 attttcatcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 18469327 - 18469451
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| || ||    
T  18469327 cgttgttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtatg 18469426  T
Q  129 a-ttttcatcgaattcacaacactt 152  Q
    | |||||||||||||||||||||||    
T  18469427 atttttcatcgaattcacaacactt 18469451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 18467002 - 18467123
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  18467002 cgttgttttctacttttggcttgtatttataacttccatacactttgttttgattgcttgattatcccttgctccacacatcaagtttgttattagtgtg 18467101  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  18467102 atttttcatcgaattcacaaca 18467123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 41585708 - 41585580
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||  ||||| ||||||||||||| | ||||    
T  41585708 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgccccacacatcaagtttgttat 41585609  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| ||||||||||||||||||||    
T  41585608 tggtgtgatttttcatcgaattcacaaca 41585580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 9020507 - 9020649
Alignment:
Q  6 tgtgttctcgct-ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    ||||||||| || ||||||||| ||||| ||||||||||||| || ||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||||    
T  9020507 tgtgttctctctcttcttttctatcgttattttctacttttgctt-gtgtttataacttcaatacactttattt-ggttgcttgattattaattgctcca 9020604  T
Q  105 cacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    || ||||| ||||||||| ||||||||||||| ||||||||||||    
T  9020605 cagatcaaatattttattcgtgtgattttcattgaattcacaaca 9020649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 36208877 - 36209007
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    |||||||||||||||||||||||||| ||||| |||||| |  || |||||||||||||||||||||||||||| |||||||| ||||||||||| | ||    
T  36208877 tttctctcgttgttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcacttgctctacacatcaagtttatt 36208976  T
Q  120 atttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||  ||||| ||||||||||||||||||||    
T  36208977 attgatgtgatttttcatcgaattcacaaca 36209007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 38960093 - 38959972
Alignment:
Q  28 tcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  38960093 tcgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 38959995  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  38959994 gatttttcatcgaattcgcaaca 38959972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 17818463 - 17818338
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  17818463 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttat 17818364  T
Q  122 ttgtgtgattt--tcatcgaattcac 145  Q
    | ||||| |||  |||||||||||||    
T  17818363 tggtgtggttttctcatcgaattcac 17818338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 27912854 - 27912973
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||| | ||||  |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| ||| |    
T  27912854 cgttgttttctacttttagcttgtatttataacttccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtggg 27912953  T
Q  129 a-ttttcatcgaattcacaa 147  Q
    | ||||||||||||||||||    
T  27912954 atttttcatcgaattcacaa 27912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 39798348 - 39798468
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| | | ||||| |||||    
T  39798348 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaaat-tgttattggtgtg 39798446  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  39798447 atttttcatcgaattcgcaaca 39798468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 21289064 - 21289187
Alignment:
Q  23 ttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||||||||||||||||||||| ||||| |||| |  ||||||||||||||||||||||||||||| |||  ||||||||||||||||||| |  ||    
T  21289064 ttctctcgttgttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgata 21289163  T
Q  121 tttgtgtga-ttttcatcgaattc 143  Q
    || |||||| ||||||||||||||    
T  21289164 ttggtgtgatttttcatcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 38882406 - 38882525
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  38882406 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 38882504  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  38882505 attttcatcgaattcgcaaca 38882525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 1189599 - 1189454
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||  ||||||||||||||| ||||| |||||| |  |||||||| ||||||||||| ||||||||||| |||||||    
T  1189599 tgtgttctctcttcctttctctctcgcagttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattccttgctc 1189500  T
Q  103 cacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||| |  |||| ||||| ||||||||||||||||||||    
T  1189499 cacacatcaagtttgatattggtgtg-ttttcatcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 658337 - 658204
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||| | |||||||||||||||| || || |||| | |  ||| ||||||||||||||||||| |||||||| ||||||||||||||||| |     
T  658337 ttcttttctcttgctgttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgattattccttgctccacacatcaaatt 658238  T
Q  116 ttttatttgtgtgattttcatcgaattcacaaca 149  Q
    | ||||| |||||||||||||||||||| |||||    
T  658237 tgttattggtgtgattttcatcgaattcgcaaca 658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 4236946 - 4237066
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  |||||| |||||||||||| | ||||| |||||    
T  4236946 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgcttcacacatcaagt-tgttattggtgtg 4237044  T
Q  129 attttcatcgaattcacaacac 150  Q
    ||||||| ||||||||||||||    
T  4237045 attttcaacgaattcacaacac 4237066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 32 - 149
Target Start/End: Original strand, 4410343 - 4410458
Alignment:
Q  32 tgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatt 131  Q
    |||||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||    
T  4410343 tgttttctacttttggcttgtatttataacttccatacacctt-ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatt 4410440  T
Q  132 ttcatcgaattcacaaca 149  Q
    |||| ||||||| |||||    
T  4410441 ttcaacgaattcgcaaca 4410458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 20045284 - 20045384
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||| |  ||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  20045284 ctttcttttctctcgttgttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcatttgcttcacacatcaag 20045383  T
Q  114 t 114  Q
    |    
T  20045384 t 20045384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 20505821 - 20505687
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttg---ttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||| |||||| ||||| |||||| |  |||||||||||||   |||||||||| ||||||||||||||||||||||||||||     
T  20505821 ttttctctcgttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtt 20505722  T
Q  116 ttttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    | ||||| ||||| ||| |||| ||||||||||||    
T  20505721 tgttattggtgtgttttctcattgaattcacaaca 20505687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 26098259 - 26098167
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26098259 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagt 26098167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 27910751 - 27910872
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||| ||||||| | ||||  |||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||| | | ||||| |||||    
T  27910751 cgttgttttatacttttagcttgtatttataacttccatacactttattttggttgattgattatcccttgctccacacatcaaatttgttattggtgtg 27910850  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  27910851 atttttcatcgaattcacaaca 27910872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 12555886 - 12555757
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  | |||||||||| ||||||||||||||||||| ||||||||||||||||| | | ||||    
T  12555886 tctctcgttgttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattattccttgctccacacatcaaatttgttat 12555787  T
Q  122 ttgtgtga---ttttcatcgaattcacaac 148  Q
    | ||||||   || ||||||||||||||||    
T  12555786 tggtgtgagttttctcatcgaattcacaac 12555757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 20043277 - 20043388
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttga-ttattacttgctc 102  Q
    ||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||   |||||||||||||||||||| ||||||| |||| ||||||||    
T  20043277 tgtgttctctctttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgatttatcacttgctc 20043376  T
Q  103 cacacatcaagt 114  Q
    |||| |||||||    
T  20043377 cacaaatcaagt 20043388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 37705755 - 37705626
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| || ||| |  |||||| ||||||||||||||||||| ||||| ||||||||||||||||||| | ||||    
T  37705755 tctctcgctgttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttggttattccttgctccacacatcaagtttgttat 37705656  T
Q  122 ttgtgtgattt--tcatcgaattcacaaca 149  Q
    | ||||| |||  |||||||||||||||||    
T  37705655 tggtgtggttttctcatcgaattcacaaca 37705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15445264 - 15445119
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||||| || |||||||| |||||| |||||||||  ||| | ||||| |||||| || ||| ||| |||||||| |||||||||||||  ||||    
T  15445264 tttcgtgtgttttctctttcttt-ctctcgatgttttctatcttttgcttgtgtttataattttcatccacgttgttttgattgcttgattatt--ttgc 15445168  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaacac 150  Q
    |||||||||||||||||||||| ||||| |||| | ||||||||||||||    
T  15445167 tccacacatcaagtattttattggtgtg-tttttaacgaattcacaacac 15445119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 34530679 - 34530558
Alignment:
Q  32 tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||| ||||||||||  ||||| |||||| |  ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||    
T  34530679 tgttgtctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtga 34530580  T
Q  130 -ttttcatcgaattcacaacac 150  Q
     |||||||||||||||||||||    
T  34530579 tttttcatcgaattcacaacac 34530558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 34477014 - 34476894
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  34477014 cgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 34476916  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  34476915 gattttcatcgaattcgcaaca 34476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 40221835 - 40221963
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||   |||||||||||||||||| | ||||    
T  40221835 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaagtttgttat 40221934  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||| |||| ||||||    
T  40221935 tggtgtgatttttcatcaaatttacaaca 40221963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 21684413 - 21684294
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| || |  |||    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  21684413 cgttgttttctacttttggcttttatttaattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 21684315  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  21684314 attttcatcgaattcgcaaca 21684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 696165 - 696311
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttg-cttgattattacttgctc 102  Q
    ||||||||| |||||||| |||| ||||||||||||||||| |||||| ||||||||  |||||||||||| ||||||||  |||||||||  |||||||    
T  696165 tgtgttctctctttcttt-ctct-gttgttttctacttttg-tttgtgtttataactgttccatacactttattttggttttcttgattatctcttgctc 696261  T
Q  103 cacacatcaagtattttatttgtgtgattt--tcatcgaattcacaacac 150  Q
    |||||||||||| | ||||| || ||||||  ||||||||||||||||||    
T  696262 cacacatcaagtctgttattggtatgattttctcatcgaattcacaacac 696311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 2724196 - 2724310
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    |||||| ||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||  ||||||  ||||||||||| | |    
T  2724196 ttttctttcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctatacacatcaagtttgt 2724295  T
Q  119 tatttgtgtgatttt 133  Q
    |||| ||||||||||    
T  2724296 tattggtgtgatttt 2724310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 31179326 - 31179209
Alignment:
Q  36 ttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttc 134  Q
    |||||||||||| ||||| |||    |||||||||||||||||||||||||| |||||  ||||||||| ||||||||| | ||||| |||||| |||||    
T  31179326 ttctacttttggcttgtgtttaattattccatacactttgttttggttgcttaattatcccttgctccatacatcaagt-tgttattggtgtgatttttc 31179228  T
Q  135 atcgaattcacaacacttt 153  Q
    |||||||||||||||||||    
T  31179227 atcgaattcacaacacttt 31179209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 31543052 - 31543153
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| ||||||||||||||||||||||   ||||||||||||||||||| | ||||| |||||    
T  31543052 cgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattaacccttgctccacacatcaagt-tgttattggtgtg 31543150  T
Q  129 att 131  Q
    |||    
T  31543151 att 31543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 6756798 - 6756926
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt-tta 120  Q
    ||||||| |||||||||||||||| ||||| |||||| |  | |||||||||||||||| |||| ||||||| |||||||||||||||||||| || |||    
T  6756798 tctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcacttgctccacacatcaagttttgtta 6756897  T
Q  121 tttgtgtgattt-tcatcgaattcacaac 148  Q
    || ||||| ||| ||||||||||| ||||    
T  6756898 ttggtgtgttttctcatcgaattcgcaac 6756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 10474315 - 10474167
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |  ||||||||||| | ||||| |||||| |  ||||||||||||||||||||| |||||||||| |||||||    
T  10474315 tgtgttctctcttcctttctctctcgctaatttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattccttgctc 10474216  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||||||| | |||||  ||| | |||||||||||| ||||||||    
T  10474215 cacacatcaagtttattattgatgtaatttttcatcgaatacacaacac 10474167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 24127143 - 24127291
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttg-gttgcttgattattacttgct 101  Q
    ||||||||| |||||||| |||||||||||||||||||||||  || || |||||| |  | |||||||||||||||  ||||  |||||||  ||||||    
T  24127143 tgtgttctctctttctttctctctcgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgct 24127242  T
Q  102 ccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| |||| | |||||||||||| ||||||||||||||||||||    
T  24127243 ccacacattaagtttgttatttgtgtgatttttcatcgaattcacaaca 24127291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 18596945 - 18597072
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||||||||||||  ||||| |||||| |  |||||||||||| |||||| ||  ||||||| |||||||||| |||||||||     
T  18596945 ttcttttctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggatgtctgattatcacttgctccatacatcaagtt 18597044  T
Q  116 ttttatttgtgtga-ttttcatcgaatt 142  Q
    | ||||| |||||| |||||||||||||    
T  18597045 tgttattggtgtgatttttcatcgaatt 18597072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 25921434 - 25921315
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  25921434 cgttgttttctacttttggcttgtatttaattgttccatacactttattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 25921336  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||| ||| |||||||| ||||    
T  25921335 attctcaacgaattcaaaaca 25921315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 25804342 - 25804455
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  25804342 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 25804440  T
Q  129 --attttcatcgaat 141  Q
      |||||||||||||    
T  25804441 atattttcatcgaat 25804455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 31465962 - 31465833
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||||| |||||| |||| |||||||||||| | | |||    
T  31465962 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgtta 31465863  T
Q  121 tttgtgtga-ttttcatcgaattcacaaca 149  Q
    || |||||| |||||||| ||||| |||||    
T  31465862 ttggtgtgatttttcatcaaattcgcaaca 31465833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 2175219 - 2175341
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    || |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  2175219 cgttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 2175317  T
Q  129 a---ttttcatcgaattcacaaca 149  Q
    |   |||| |||||||||||||||    
T  2175318 acttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 2818327 - 2818178
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||| ||| |||||||  ||||    
T  2818327 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttg 2818228  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacac 150  Q
    ||||| ||||||||| | ||||| ||||| ||||||||||| |||||||||    
T  2818227 ctccatacatcaagtttgttattggtgtgtttttcatcgaa-tcacaacac 2818178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 10750017 - 10750137
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  10750017 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 10750115  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||| |||||||||||||||    
T  10750116 gattttgatcgaattcacaaca 10750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 10757493 - 10757613
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  10757493 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 10757591  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||| |||||||||||||||    
T  10757592 gattttgatcgaattcacaaca 10757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 17073199 - 17073321
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||  ||||| |||||| |  ||||||||||||||||| |||||||||| || |||||||||||||||||| | | ||||| ||||    
T  17073199 gttgttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcatcacttgctccacacatcaaatttattattggtgt 17073298  T
Q  128 gattttc--atcgaattcacaaca 149  Q
     ||||||  |||||||||||||||    
T  17073299 -attttcggatcgaattcacaaca 17073321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 34479379 - 34479259
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| |||   |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  34479379 cgttgttttctacttttggcttgcatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 34479281  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||| ||||| |||||    
T  34479280 gattttcatcaaattcgcaaca 34479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 36402320 - 36402170
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   ||||||||||||||| | ||||| |||||| |  || |||||||||| |||||||||| |||||||  ||||    
T  36402320 tgtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttg 36402221  T
Q  100 ctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| | ||||| |||||| |||||||||||||| |||||    
T  36402220 ctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 2954714 - 2954849
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggtt-ataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||| |||||||||||||||| ||||| |  |||| |  ||||||||||||||||||||||  ||||||| |||| ||||||||||||| |    
T  2954714 ttcttttctctcgctgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatcacttactccacacatcaaat 2954813  T
Q  115 attttatttgtgtgattt-tcatcgaattcacaaca 149  Q
     | ||||| ||||| ||| |||||||||||| ||||    
T  2954814 ttgttattggtgtgttttctcatcgaattcagaaca 2954849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 18511193 - 18511056
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||| | ||||| |||||| |  | ||||||||||||||| ||||||||| |||  |||||||||||||||||    
T  18511193 ttcttttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcccttgctccacacatcaa 18511094  T
Q  113 gtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    || | |||||  |||||||| ||||||||||| |||||    
T  18511093 gtttgttattgatgtgatttatcatcgaattcgcaaca 18511056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 15552569 - 15552686
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga--tt 131  Q
    |||||||||||| | ||||  ||||||||| ||||||||||||||| |||||||||||||  ||| || ||| |||||||| | ||||| ||||||  ||    
T  15552569 ttttctacttttagcttgtatttataactttcatacactttgttttagttgcttgattatcccttacttcacgcatcaagt-tgttattggtgtgatttt 15552667  T
Q  132 ttcatcgaattcacaacac 150  Q
    |||||||||||||||||||    
T  15552668 ttcatcgaattcacaacac 15552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 3373098 - 3372977
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  3373098 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 3373000  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  3372999 gatttttcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 16776473 - 16776577
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||  |||||| |  | |||||||||||||||| |||| |||||||| ||||||||||||||||||| | ||||| ||||    
T  16776473 gttgttttctacttttggcttgta-ttataattgtttcatacactttgttttgattgcctgattattccttgctccacacatcaagtttgttattggtgt 16776571  T
Q  128 gatttt 133  Q
    ||||||    
T  16776572 gatttt 16776577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 21948338 - 21948462
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgtttt--ggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    ||||||| | |||||||||||||| ||||| |||||| |  |||||||||||| ||||  ||||||||||||||  ||||||||||||||||||| | ||    
T  21948338 tctctcgctattttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgtt 21948437  T
Q  120 atttgtgtgattt-tcatcgaattc 143  Q
    ||| ||||| ||| |||||||||||    
T  21948438 attggtgtgttttctcatcgaattc 21948462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 25904390 - 25904499
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||||||||| ||||||   ||||||||||||||||||  |||||||| |||  ||||| |    
T  25904390 tgtgttctctcttcctttctctctcgctgttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttgactatcccttgcac 25904489  T
Q  103 cacacatcaa 112  Q
    ||||||||||    
T  25904490 cacacatcaa 25904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 26098018 - 26098127
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| | ||||| |||||||||||||||| | ||| |||||| |  ||||||||||||||||||||||||||| |||  |||||||    
T  26098018 tgtgttctctcttcctttctatctcgctgttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatcccttgctc 26098117  T
Q  103 cacacatcaa 112  Q
    ||||||||||    
T  26098118 cacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42771059 - 42771167
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| ||| | ||||||| | |||||||||| |||| || ||| |||||||||||||||| ||   ||||||| ||||||||||||||||    
T  42771059 tttcgtgtgttctctctt-catttctcttgctgttttctacctttgctt-gtgtttataacttccatacattta--tttggttacttgattattacttgc 42771154  T
Q  101 tccacacatcaag 113  Q
    |||||||||||||    
T  42771155 tccacacatcaag 42771167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10529059 - 10528937
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| |||||||||| |||||||  |||||| |||||||||||| | ||||| ||||    
T  10529059 cgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaagt-tgttattggtgt 10528961  T
Q  128 gattt--tcatcgaattcacaaca 149  Q
    |||||  |||||||||||||||||    
T  10528960 gattttctcatcgaattcacaaca 10528937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 2144562 - 2144438
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    |||||||||| |||||||| |||||| ||||||||||||||| || ||| |||||| |   |  ||| ||||||| ||||||||||||||  || |||||    
T  2144562 gtgtgttctctctttcttt-ctctcgctgttttctacttttgctt-gtgtttataattgttacccacattgttttagttgcttgattatt--ttactcca 2144467  T
Q  105 cacatcaagtattttatttgtgtgatttt 133  Q
    ||||| |||||||||||| ||||||||||    
T  2144466 cacataaagtattttattggtgtgatttt 2144438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 6745367 - 6745507
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgtttt---ggttgcttgattattacttgctccacacat 109  Q
    |||||||||||||   |||||||| |||||||| ||||| |||||| |  |||||||||||||||||   || ||||||| |||  ||||||||||||||    
T  6745367 ttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacat 6745466  T
Q  110 caagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||| | ||||| ||||| ||| ||||||||||| |||||    
T  6745467 caagtttgttattggtgtgttttctcatcgaattcgcaaca 6745507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 6747603 - 6747743
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgt---tttggttgcttgattattacttgctccacacat 109  Q
    |||||||||||||   |||||||| |||||||| ||||| |||||| |  ||||||||||||||   |||||||||||||||||  ||||||| ||||||    
T  6747603 ttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacacat 6747702  T
Q  110 caagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||| | ||||| ||||| ||| ||||| ||||| |||||    
T  6747703 caagtttgttattggtgtgttttctcatccaattcgcaaca 6747743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 18509299 - 18509201
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatca 111  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||| |||| |||  ||||||||||||||||    
T  18509299 ttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 39854798 - 39854921
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||| ||||||||| ||||| |||||| |  |||||||||||| |||| |||||||| | |||  ||||||||||| ||||||| | ||||| |||    
T  39854798 gttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttattattggtg 39854897  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| |||||||||||||| |||||    
T  39854898 tgatttttcatcgaattcgcaaca 39854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 31545401 - 31545502
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| |||| ||||  |||||||||||   ||| ||||||||||||||| | ||||| |||||    
T  31545401 cgttgttttctacttttggcttgtatttataactttcatacgctttattttaattgcttgattaacccttactccacacatcaagt-tgttattggtgtg 31545499  T
Q  129 att 131  Q
    |||    
T  31545500 att 31545502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 15354502 - 15354414
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  15354502 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 15354414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 15356778 - 15356690
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  15356778 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 15356690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 23665396 - 23665484
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  23665396 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 23665484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 23741785 - 23741697
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  23741785 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 23741697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 23793191 - 23793103
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  23793191 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 23793103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 16092172 - 16092044
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||| | ||| ||   ||||||| |||||| ||||||||||||| |||   |||||||||| ||||||| | ||||    
T  16092172 tctctcgctgttttctacttttggcttgcgtttacaattgttccatatactttg-tttggttgcttgactatccattgctccacatatcaagtttgttat 16092074  T
Q  122 ttgtgtgattt-tcatcgaattcacaacac 150  Q
    | ||| | ||| ||||||||||||||||||    
T  16092073 tggtgcgttttctcatcgaattcacaacac 16092044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 35314788 - 35314833
Alignment:
Q  104 acacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||| ||||||||| | |||||||||||||    
T  35314788 acacatcaagtattttatttatgtgatttttaacgaattcacaaca 35314833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 31472590 - 31472458
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatt 117  Q
    |||||||||||| |||||||||| |||||||||||  ||||||||   |  ||| |||| |||||||||||| |||  ||| || |||||||||||| |     
T  31472590 ttcttttctctcattgttttctaattttggtttgtaattataactgttacccac-ttgtattggttgcttgagtatctcttacttcacacatcaagtttg 31472492  T
Q  118 ttat--ttgtgtgattttcatcgaattcacaaca 149  Q
    ||||   |||||  |||||||||||||| |||||    
T  31472491 ttatcggtgtgtatttttcatcgaattcgcaaca 31472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 15143826 - 15143896
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| |  || ||||||||||||| ||||||||| || ||| |||||| |||||||||||||    
T  15143826 ttggttgcttgattact--ttactccacacatcaattattttattggtatgatttttcaacgaattcacaaca 15143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 149
Target Start/End: Original strand, 24465832 - 24465975
Alignment:
Q  7 gtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccaca 106  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  24465832 gtgttctctctttcttttctctcgctgttttctacttttggtttgtgattataacttccatacactttgttttggttgcttgaatatcacttgttccaca 24465931  T
Q  107 catcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||| | | ||||| |||||| ||||||||||||||||||||    
T  24465932 catcaaatttattattggtgtgatttttcatcgaattcacaaca 24465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 7188845 - 7188979
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7188845 ctttcttttctctcgctgttttctacttttgctt-gtgtttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagta 7188943  T
Q  116 ttttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||  |||||  |||| |||||||||||||||    
T  7188944 ttttattgatgtgattttttgatcgaattcacaaca 7188979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 22394020 - 22394162
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||||||  |    
T  22394020 tgtgttctctctttcttt-ctctcgttgttttctacttttggtttgtgattataacttccatacactttgttttggttgtttgactatcacttgctc--c 22394116  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    ||||||||| | ||||| |||  | |||||||||||||||||||||    
T  22394117 acatcaagtttattattggtggaatttttcatcgaattcacaacac 22394162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 24748907 - 24749035
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| | ||||    
T  24748907 tttctctcgttgttttctacttttg-tttgtgattataacttccatacactttgttttggttgtttgattatcccttgctccacacatcaagtttgttat 24749005  T
Q  122 ttgtgtgattt--tcatcgaattcacaaca 149  Q
    | ||||| |||  |||||||||||||||||    
T  24749006 tggtgtggttttctcatcgaattcacaaca 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 27832616 - 27832488
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | |||||||||||| |||| | ||||    
T  27832616 tttctctcactgttttctacttttggtttgtgattataacttccatacactttgttttggttacttgattatttcctgctccacacattaagtttgttat 27832517  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | || ||| ||||||||||||||||||||    
T  27832516 tggtatgatttttcatcgaattcacaaca 27832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 9027154 - 9027034
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  9027154 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 9027056  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  9027055 atttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 31435027 - 31434892
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |  ||| |||||||| ||||| ||||||||||||| |||||||||||||||||||     
T  31435027 ttcttttctctcgttgttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattccttgctccacacatcaagtt 31434928  T
Q  116 ttttatttgtgtgattt--tcatcgaattcacaaca 149  Q
    | ||||| |||||||||  ||||||||||| |||||    
T  31434927 tgttattggtgtgattttctcatcgaattcgcaaca 31434892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 20091153 - 20091036
Alignment:
Q  2 ttcgtgtgttctcgctttctttt-ctctcgttgttttctacttttggtttgtggttataacttccatacactttgt-tttggttgcttgattattacttg 99  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||   |||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  20091153 ttcgtgtgttctctctttctttttctctcgttgttttctactttt-acttgt-gttataacttccatacactttgtatctggttgcttgattattacttg 20091056  T
Q  100 ctccacacatcaagtatttt 119  Q
    ||| ||||||||||||||||    
T  20091055 ctcaacacatcaagtatttt 20091036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 21678372 - 21678506
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||| || |||||||||||||||| ||||| |||||| |  ||| |||||||||||||||||||||||||||| ||||||||||| |||||||     
T  21678372 ttcttttctcccgctgttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattattccttgctccacaaatcaagtt 21678471  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | ||||  |||||| ||||||||||||||||||||    
T  21678472 tgttatcggtgtgatttttcatcgaattcacaaca 21678506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 21680338 - 21680472
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |  ||||||||||||||||| ||||| |||||||| |||||| |||||||||||      
T  21680338 ttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgattattccttgcttcacacatcaagct 21680437  T
Q  116 ttttatttgtgt-gattttcatcgaattcacaaca 149  Q
    | ||||| |||| | ||||||||||||||||||||    
T  21680438 tgttattggtgtgggttttcatcgaattcacaaca 21680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 37412101 - 37411965
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||||||||||||| |||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| |||| ||||||||||||||     
T  37412101 ttcttttctctcgttgttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattattccttgttccacacatcaagtt 37412002  T
Q  116 ttttatttgtgtga---ttttcatcgaattcacaaca 149  Q
    | ||||| ||||||   || ||||| |||||||||||    
T  37412001 tgttattggtgtgagttttctcatcaaattcacaaca 37411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 24813491 - 24813348
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgtt-ttggttgcttgattattacttgctcc 103  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||| || |||||| |   |  ||| ||| | ||||||||||||||||||||||||||    
T  24813491 gtgtgttctctcttccttttctctcgttgttttctacttttg-tttatgtttataattgttac-cacgttgatattggttgcttgattattacttgctcc 24813394  T
Q  104 acacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||    
T  24813393 acacatcaagtattttattgatgtgattttcatcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 13099466 - 13099317
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||| ||||  ||  |||||    
T  13099466 tgtgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgacgatcccttgc 13099367  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  13099366 tccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 13099317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 26295758 - 26295885
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||| |||||||||||||||||||| ||||| |||||| || |||||||||||||||| |||||||||||| || ||||||| |||||||||| |||||    
T  26295758 tttctttcgttgttttctacttttggcttgtgtttataattttcatacactttgttttgattgcttgattatcacgtgctccatacatcaagta-tttat 26295856  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||| | |||||||||    
T  26295857 tggtgtgatttttcatcaatttcacaaca 26295885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 7351612 - 7351491
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||| |||||  ||| ||||||||||||||| | ||||| |||||    
T  7351612 cgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttaattatcccttactccacacatcaagt-tgttattggtgtg 7351514  T
Q  129 a--ttttcatcgaattcacaaca 149  Q
    |  ||||||||||||||||||||    
T  7351513 attttttcatcgaattcacaaca 7351491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 6349097 - 6349205
Alignment:
Q  8 tgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacac 107  Q
    ||||||| |||||||| |||||| | ||||||||||||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  6349097 tgttctctctttcttt-ctctcgctattttctacttttgctt-gtgtttataacttccgtacactttgttttggttgcttgattattacttgctccatac 6349194  T
Q  108 atcaagtattt 118  Q
     ||||||||||    
T  6349195 gtcaagtattt 6349205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 443914 - 444044
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||| |  || |||||||||||||||||||||||| |||| ||||||||||||||||||| | ||||    
T  443914 tctctcgctgttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttgactattccttgctccacacatcaagtttgttat 444013  T
Q  122 ttgtgtga---ttttcatcgaattcacaaca 149  Q
    | ||||||   || |||||||||||||||||    
T  444014 tggtgtgagttttctcatcgaattcacaaca 444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 20297690 - 20297810
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  20297690 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 20297788  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  20297789 atttttcatcgaattcacaaca 20297810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 20626362 - 20626482
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||||| || |  |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| || | ||||| ||||||    
T  20626362 gttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggt-tgttattggtgtga 20626460  T
Q  130 -ttttcatcgaattcacaacac 150  Q
     |||||||||||||| ||||||    
T  20626461 tttttcatcgaattcgcaacac 20626482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 20630253 - 20630373
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||||| || |  |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| || | ||||| ||||||    
T  20630253 gttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggt-tgttattggtgtga 20630351  T
Q  130 -ttttcatcgaattcacaacac 150  Q
     |||||||||||||| ||||||    
T  20630352 tttttcatcgaattcgcaacac 20630373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 20642672 - 20642792
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||||| || |  |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| || | ||||| ||||||    
T  20642672 gttgttttctacttttggcttatatttataacttccatacactttattttggttgcttgattatctcttgctccacacatcaggt-tgttattggtgtga 20642770  T
Q  130 -ttttcatcgaattcacaacac 150  Q
     |||||||||||||| ||||||    
T  20642771 tttttcatcgaattcgcaacac 20642792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 38394314 - 38394434
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  38394314 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 38394412  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  38394413 atttttcatcgaattcacaaca 38394434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 42330974 - 42330846
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||   |||||||||||||||||| | ||||    
T  42330974 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttattat 42330875  T
Q  122 ttgtgtgattt-tcatcgaattcacaaca 149  Q
    | | ||||||| ||||||||||| |||||    
T  42330874 tggcgtgatttctcatcgaattcgcaaca 42330846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 44724891 - 44725022
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataac---ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    |||||||||||||||||||||||||| ||||| ||||||    |||||||||||||||||||||||||||| |||  ||||||||||||||||||| | |    
T  44724891 tttctctcgttgttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgt 44724990  T
Q  119 tatttgtgtgattt-tcatcgaattcacaaca 149  Q
    |||| ||||| |||  |||||||||| |||||    
T  44724991 tattggtgtgttttcccatcgaattcgcaaca 44725022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 48457981 - 48458100
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  48457981 cgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 48458079  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  48458080 attttcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 20299789 - 20299910
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||    
T  20299789 gttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtga 20299887  T
Q  130 -ttttcatcgaattcacaacact 151  Q
     |||||||| |||||||||||||    
T  20299888 tttttcatcaaattcacaacact 20299910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 24817350 - 24817210
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgtt-ttggttgcttgattattacttg 99  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||| |||||| ||||||||   |  ||| ||| | ||| || |||||||||||||||    
T  24817350 tttcgtgtgttctgtctttcttttctctcgttgttttctaattttg-tttgtgtttataactgttac-cacgttgatattgttttcttgattattacttg 24817253  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    |||||||||| |||||||||||| ||||||||||||| |||||    
T  24817252 ctccacacattaagtattttattggtgtgattttcattgaatt 24817210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 11759455 - 11759575
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  11759455 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 11759553  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  11759554 atttttcatcgaattcgcaaca 11759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4295915 - 4295788
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||   |||||||||||||| ||||| |||| | |  || ||||||||||||||||||||||||| ||| |||||||||||||||||||     
T  4295915 ttcttttctctcgccattttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgatgattccttgctccacacatcaagtt 4295816  T
Q  116 ttttatttgtgtga-ttttcatcgaatt 142  Q
    | ||||| |||||| |||||||||||||    
T  4295815 tgttattggtgtgatttttcatcgaatt 4295788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 11355575 - 11355705
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||| |||||||||||||||||| ||||| |||||| |  ||||||||||||||||| |||||| |||||||| ||||||||||||||||| | | |||    
T  11355575 tctcttgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttatta 11355674  T
Q  121 tttgtgtga--ttttcatcgaattcacaaca 149  Q
    || ||||||  |||||||||||||| |||||    
T  11355675 ttggtgtgattttttcatcgaattcccaaca 11355705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 25542856 - 25542979
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||| ||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  25542856 cgttgttttctacttttggcttgtatttaattgttccatacattttgttttgattgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 25542954  T
Q  129 a-ttttcatcgaattcacaacactt 152  Q
    | |||||||||||||||||||||||    
T  25542955 atttttcatcgaattcacaacactt 25542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 39145978 - 39145867
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||| |  |  ||||| |||||||||||||||||||||| |||| |||    
T  39145978 tgtgttctctcttcctttctctctcgttgttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcacttactc 39145879  T
Q  103 cacacatcaagt 114  Q
    ||||||||||||    
T  39145878 cacacatcaagt 39145867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 43253444 - 43253358
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||| | | ||||| |||||||||||||||||||| |||||    
T  43253444 ttccatacactttgttttggttgcttgattatctcttgctccacacatcaaat-tgttattggtgtgattttcatcgaattcgcaaca 43253358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 1606707 - 1606828
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||    
T  1606707 cgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtg 1606805  T
Q  129 a-ttttcatcgaattcacaacac 150  Q
    | |||||||||||||||||||||    
T  1606806 atttttcatcgaattcacaacac 1606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 35959 - 36059
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgat 130  Q
    ||||||||||||||||||||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||    
T  35959 ttgttttctacttttggtttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgat 36057  T
Q  131 tt 132  Q
    ||    
T  36058 tt 36059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 7471941 - 7471821
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  7471941 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 7471843  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||| |||||| |||||    
T  7471842 atttttcattgaattcgcaaca 7471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 27306213 - 27306075
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||| ||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  |||| ||||||||||||    
T  27306213 ttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaa 27306114  T
Q  113 gtattttatttgtgtgat-tttcatcgaattcacaacac 150  Q
    || | ||||| ||||||| | ||||||||||| ||||||    
T  27306113 gtttgttattggtgtgatctctcatcgaattcgcaacac 27306075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 28485893 - 28486013
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| | ||||| |||||    
T  28485893 cgttgttttctacttttggcttgtatttaattgttccatacattttgttttggttgcttgattatcccttgctccacatatcaagt-tgttattggtgtg 28485991  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  28485992 atttttcatcgaattcacaaca 28486013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 7094421 - 7094301
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    ||||| ||||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| |||||    
T  7094421 cgttgttttctacttttgacttgtatttaattgttccacacactttattttggttgcttgactatgccttgctccacacatcaagtttgttattggtgtg 7094322  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  7094321 attttcatcgaattcgcaaca 7094301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 28487881 - 28488000
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  28487881 cgttgttttctacttttgacttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 28487979  T
Q  129 a-ttttcatcgaattcacaac 148  Q
    | |||||||||||||| ||||    
T  28487980 atttttcatcgaattcgcaac 28488000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 40946694 - 40946777
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||  ||||||| |||||||||||||||||    
T  40946694 catacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattgatgtgattctcatcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 2935630 - 2935716
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||| ||||||||||||||||| |||||  |||||| |||||||||||| | ||||| ||||||||||||||||||||||||||    
T  2935630 ttccatacgctttgttttggttgcttaattatcccttgcttcacacatcaagt-tgttattggtgtgattttcatcgaattcacaaca 2935716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 3036052 - 3036170
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||| ||||||| | | ||||| |||||    
T  3036052 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccaaacatcaaat-tgttattggtgtg 3036150  T
Q  129 attt-tcatcgaattcacaa 147  Q
    |||| |||||||||||||||    
T  3036151 atttctcatcgaattcacaa 3036170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 7349237 - 7349117
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||| ||||||||| ||||  ||||||||| |||||||||| |||||||||||| |||||  ||| ||||||||||||||| | ||||| |||||    
T  7349237 cgttgtttt-tacttttggcttgtatttataactttcatacactttattttggttgcttaattatcccttactccacacatcaagt-tgttattggtgtg 7349140  T
Q  129 a--ttttcatcgaattcacaaca 149  Q
    |  ||||||||||||||||||||    
T  7349139 attttttcatcgaattcacaaca 7349117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 44892 - 45012
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||| | ||||  |||    ||||||||||||||||||||||||||||||||   |||||||||||||||||| | ||||| |||||    
T  44892 cgttgttttctactttttgcttgtatttaattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagt-tgttattggtgtg 44990  T
Q  129 attt-tcatcgaattcacaaca 149  Q
    |||| ||||||||||| |||||    
T  44991 atttctcatcgaattcgcaaca 45012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 9679375 - 9679495
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||  ||||| |||||| |  ||||||||||||| |||||||||| ||||||| |||||||||||||||||||| | |||    
T  9679375 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgtta 9679474  T
Q  121 tttgtgtgattt-tcatcgaa 140  Q
    || ||||| ||| ||||||||    
T  9679475 ttggtgtgttttctcatcgaa 9679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 38397004 - 38397080
Alignment:
Q  66 atacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattc 143  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  38397004 atacactttgttttggttgctttattatcccttgctccacacatcaagt-tgttattggtgtgattttcatcgaattc 38397080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 7092141 - 7092061
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    ||||| ||||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| |||||||||||||||||||    
T  7092141 ttccacacactttattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaatt 7092061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 26804818 - 26804955
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||  ||||| |||||| |  ||||||||||||||||||||||||||| |||   ||||||||||||||||    
T  26804818 ttcttttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaa 26804917  T
Q  113 gtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
     | | ||||| ||||||||| ||||| ||||| |||||    
T  26804918 atttgttattggtgtgatttctcatcaaattcgcaaca 26804955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 40836704 - 40836601
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||| ||||||||  ||||||||||||||||||| | ||||| |||||    
T  40836704 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgtttgattatcccttgctccacacatcaagt-tgttattggtgtg 40836606  T
Q  129 atttt 133  Q
    |||||    
T  40836605 atttt 40836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 42223466 - 42223600
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||| ||||||||||||||||  ||||| |||||| |  |  ||||||||| ||||||||||||||||||  ||| |||||||||||||||     
T  42223466 ttcttttctctcattgttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatcccttactccacacatcaagtt 42223565  T
Q  116 ttttatttgtgtg-attttcatcgaattcacaaca 149  Q
    | ||||| |||||  |||| ||||||||| |||||    
T  42223566 tgttattggtgtgtttttttatcgaattcgcaaca 42223600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 1850310 - 1850411
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||||||||||| ||||  |||    || |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||    
T  1850310 gttgttttctacttttggcttgtatttaattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtga 1850408  T
Q  130 ttt 132  Q
    |||    
T  1850409 ttt 1850411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 18345869 - 18345954
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  18345869 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagt 18345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 21592116 - 21592025
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||| |||||||||  ||||||| ||||||||||||||||||||    
T  21592116 tctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcacttgctccacacatcaagt 21592025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 21990447 - 21990559
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||||||| ||||| |||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  ||||||    
T  21990447 tgtgttctctcttcctttctctctcgctgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgct 21990546  T
Q  102 ccacacatcaagt 114  Q
    |||||||||||||    
T  21990547 ccacacatcaagt 21990559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 22251550 - 22251452
Alignment:
Q  32 tgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||||| ||||| |||||| |  | |||||||||||||||||||| ||||||||  ||||||| ||||||||||| | ||||| |||||    
T  22251550 tgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 149
Target Start/End: Complemental strand, 1049239 - 1049129
Alignment:
Q  42 ttttggtttgtggttataacttccatacactttgtttt--ggttgcttgattattacttgctccacacatcaagtattttatttgtgtga--ttttcatc 137  Q
    |||||| ||||  ||||||||| |||||||||||||||  ||||||||||||||  ||||||||||||||||||| | ||||| ||||||  ||||| ||    
T  1049239 ttttggcttgtatttataactttcatacactttgttttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgaatttttcttc 1049141  T
Q  138 gaattcacaaca 149  Q
    |||||| |||||    
T  1049140 gaattcgcaaca 1049129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 3878911 - 3879027
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccataca-ctttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt 132  Q
    |||||||||||||||||||  |||    |||||||||  ||||||||||||||||||||||  ||||||||||||||||||| | |||||  ||||||||    
T  3878911 ttttctacttttggtttgtatttaattgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaagt-tattattgatgtgattt 3879009  T
Q  133 -tcatcgaattcacaaca 149  Q
     ||||||||||| |||||    
T  3879010 ctcatcgaattcgcaaca 3879027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 7469983 - 7469864
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||| |||||||||||| | | ||||||||||||||| | | ||||| |||||    
T  7469983 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttagttgcttgatta-tccctgctccacacatcaaat-tgttattggtgtg 7469886  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  7469885 atttttcatcgaattcgcaaca 7469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 9681117 - 9681265
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||||||| | |||||||||||||| ||||| ||||||   |||||||||||||| |||||||||  | ||||| ||||| |    
T  9681117 tgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgtt 9681216  T
Q  102 ccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||| | ||||| ||||| ||| |||| |||| |||||||    
T  9681217 ccacacatcaagtttgttattggtgtgttttctcattgaatgcacaaca 9681265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 1502883 - 1502816
Alignment:
Q  81 gttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||  ||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttcattgaattcacaaca 1502816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 6049241 - 6049310
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||| |  |||||||| ||||||||||||||||| |||||||||| | |||||||||||||    
T  6049241 ttggttgcttgattaat--ttgctccatacatcaagtattttattggtgtgatttttaacgaattcacaaca 6049310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 1046868 - 1046775
Alignment:
Q  42 ttttggtttgtggttataacttccat-acactttgtttt--ggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||| ||||  ||||||||||||| ||||||||||||  ||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  1046868 ttttggcttgtatttataacttccattacactttgttttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 1046775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 22137439 - 22137528
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| |||||||||||||||    
T  22137439 ttccatacgctttgattttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaacac 22137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 40552466 - 40552555
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| |||||||||||||||    
T  40552466 ttccatacgctttgattttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaacac 40552555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 40550189 - 40550277
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  40550189 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 40550277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 2990533 - 2990481
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacac 150  Q
    |||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||    
T  2990533 ttgctccaaacatcaagt-ttttatttatgtgatttttatcgaattcacaacac 2990481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 20137066 - 20136991
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||||||||| |||  ||||||||||||||||| | | ||||| || |||  ||||||||||||||||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttttcatcgaattcacaaca 20136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 31155889 - 31155839
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgtttt 79  Q
    |||| |||||||||||||| ||||  ||||||||| |||||||||||||||    
T  31155889 cgtttttttctacttttggcttgtatttataactttcatacactttgtttt 31155839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 16104631 - 16104680
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||| |||||| | ||||| |||||||||||| |||||||||||||    
T  16104631 ctccacacgtcaagtttattattggtgtgattttcaccgaattcacaaca 16104680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 16297000 - 16296932
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgatt 91  Q
    |||||||||| |||||||||||||| || ||| |||||| |  ||  |||||||||||||||||||||||    
T  16297000 tttctctcgtcgttttctacttttgctt-gtgtttataattgtcagccactttgttttggttgcttgatt 16296932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 22108429 - 22108482
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagt 114  Q
    |||||||| ||||| |||||||||||| |||||  |||||||||||||||||||    
T  22108429 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt 22108482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 26214729 - 26214803
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||| |  |||||||||| || |||||||||||  ||| |||||| |  ||||||||||||    
T  26214729 ttgttttggttgcttgattaat--ttgctccacagataaagtattttataggtgcgatttttaatgaattcacaaca 26214803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 2075384 - 2075436
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||| |||||||| ||||||| ||||| || ||| |||||||||||||    
T  2075384 ttgctccacgcatcaagttttttattggtgtgtttctcaacgaattcacaaca 2075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 11081877 - 11081946
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||  ||||||||| | ||||| |||||    
T  11081877 ttttggttgcttgattatt--tttcttgacacatcaagtattttattgatgtgatttttaacgaatacacaa 11081946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 40281284 - 40281236
Alignment:
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaac 148  Q
    ||||||||||||||||||||||  ||||| |||||| ||||||||||||    
T  40281284 tccacacatcaagtattttattgttgtgacttttcaacgaattcacaac 40281236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28459182 - 28459038
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctcc 103  Q
    ||||||||| |||||||| |||||  |||||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||    
T  28459182 tgtgttctctctttcttt-ctctccctgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctcc 28459084  T
Q  104 acacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  28459083 acacatcaagtgttttattggtgtgattttcatcgaattcacaaca 28459038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 20592336 - 20592486
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| |||| | | ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20592336 tttcgtgtgttctctctttcttt-ctcttgatattttctacttttgctt-gtgattataacttccatacactttgttttggttgcttgattattacttgc 20592433  T
Q  101 tccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaacact 151  Q
    || |||||||| |||||||||| ||||||  ||||||||||||||||||||||    
T  20592434 tctacacatcacgtattttattggtgtgattttttcatcgaattcacaacact 20592486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11578105 - 11577957
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||||| || ||||  |||||||||||||||||||||||||| ||||| ||| |||||||||| ||||| ||||||||||||||||||||||||     
T  11578105 tttcgtgtgttttctcttttctttctctcgttgttttctacttttggcttgtgttta-aacttccatatactttattttggttgcttgattattacttgt 11578007  T
Q  101 tccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||||||||| |||||||  |||||  ||||||||||||||||||||    
T  11578006 tccacacatcaagt-ttttattaatgtgattttttcatcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 19007922 - 19008051
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  19007922 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgttat 19008021  T
Q  122 ttgtgtga--ttttcatcgaattcacaaca 149  Q
    | ||||||  ||||||||||||||||||||    
T  19008022 tggtgtgattttttcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 31732774 - 31732631
Alignment:
Q  2 ttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgct 101  Q
    |||||||||||||  | |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  31732774 ttcgtgtgttctc--tatcttttctctcgctgttttctacttttggtttgtgattataacttccatacactctgttttggttgcttgattataacttgct 31732677  T
Q  102 ccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
     ||||||||||     ||||| ||||||  ||||||||||||||||||||    
T  31732676 tcacacatcaa----attattcgtgtgattttttcatcgaattcacaaca 31732631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 3022451 - 3022582
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    ||||||||||||||||||| ||||||| ||||| |||||| |  ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |    
T  3022451 ttttctctcgttgttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgt 3022550  T
Q  119 tatttgtgtgat-tttcatcgaattcacaaca 149  Q
    |||||||||||| | ||| |||||||||||||    
T  3022551 tatttgtgtgatctctcaccgaattcacaaca 3022582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 19504291 - 19504178
Alignment:
Q  36 ttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttc 134  Q
    |||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||||    
T  19504291 ttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttc 19504193  T
Q  135 atcgaattcacaaca 149  Q
    |||||||||||||||    
T  19504192 atcgaattcacaaca 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 14837531 - 14837679
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||| ||||||||| ||||| |||||| |  || |||||||||||||||||||||||||||| ||||||||    
T  14837531 tgtgttctctcttcctttctctctcgctgttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcacttgctc 14837630  T
Q  103 cacacatcaagtatt-ttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||  |||||||| |||||||||||||||||    
T  14837631 cacacatcaagtattgttattgatgtgatttctcatcgaattcacaaca 14837679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 17897243 - 17897099
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| || ||| ||||||||  |||  |||||||||||||||||||||||||  ||||    
T  17897243 tttcgtgtgttctctctttcttt-ctctcgttgttttctacttttgctt-gtgtttataactgtcatcaactttgttttggttgcttgattatt--ttgc 17897148  T
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||  |||  |||| | |||||||||||||    
T  17897147 tccacacatcaagtattttattgatgtattttttaacgaattcacaaca 17897099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 19501958 - 19501843
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt 132  Q
    |||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||||    
T  19501958 ttttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattt 19501860  T
Q  133 tcatcgaattcacaaca 149  Q
    ||||||||||| |||||    
T  19501859 tcatcgaattcgcaaca 19501843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 17849380 - 17849528
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||| ||||||||||||||||||| ||||| ||| || |  ||||||||||||||||||||||||||| |||  |||||||    
T  17849380 tgtgttctctcttcctttctctcccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatcccttgctc 17849479  T
Q  103 cacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| ||||||  ||||||||||||||||||||    
T  17849480 cacacatcaagtttgttattggtgtgattttttcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 37962939 - 37962791
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||||||||  |||||||||||  ||||||||||||||||  |||||| |||||||||| ||||||| ||||||| || ||| ||||| |||| |    
T  37962939 tttcgtgtgttctctttttcttttctcaagttgttttctactttta-tttgtgattataacttctatacactctgttttgattacttaattatcacttac 37962841  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||| | |||||  ||||| ||||||||||||||||||||    
T  37962840 tccacacatcaagtttattattgatgtgatttttcatcgaattcacaaca 37962791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 22163003 - 22162864
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataac--ttccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||  |||||| ||||||||||       
T  22163003 ttcttttctctcgttgttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatcccttgcttcacacatcaaaat 22162904  T
Q  116 ttttatttgtgtgattt-tcatcgaattcacaacactttg 154  Q
    | ||||| ||||| ||| ||||||||||| ||||| ||||    
T  22162903 tgttattggtgtgttttctcatcgaattcgcaacagtttg 22162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 22874424 - 22874519
Alignment:
Q  55 ttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  22874424 ttataacttccatacactttgttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 38020354 - 38020488
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    ||||||||||| ||| |||||||||||||| | ||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  38020354 ctttcttttctttcgctgttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccatacatcaaa 38020453  T
Q  114 tattttatttgtgtgatttt-catcgaattcacaa 147  Q
    | | ||||| |||||||||| |||| |||||||||    
T  38020454 tttgttattggtgtgattttacatcaaattcacaa 38020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 6264140 - 6263993
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||||||||||||||||| || ||||| | |||| |  ||||||||||||||||||||||| ||||  | ||||||||    
T  6264140 tgtgttctctcttcctttctctctcgttgttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcacttgctc 6264041  T
Q  103 cacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  6264040 cacacatcaagtttgttattagtgtgttttctcatcgaattcacaaca 6263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 145
Target Start/End: Complemental strand, 6258809 - 6258666
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||| | ||||| |||||| |  |||| |||||||||||||||||| ||||||| ||||||||    
T  6258809 tgtgttctctcttcctttctctctcgctgttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcacttgctc 6258710  T
Q  103 cacacatcaagtattttatttgtgtgattt-tcatcgaattcac 145  Q
    |||||||||||| | ||||| || || ||| |||||||||||||    
T  6258709 cacacatcaagtttgttattggtatgttttctcatcgaattcac 6258666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 36561068 - 36560981
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  36561068 ttccatacgctttgttttggttgcttgattattccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 36560981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 27105091 - 27105206
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| |||   |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  27105091 cgttgttttctacttttggcttgcatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtg 27105190  T
Q  129 a-ttttcatcgaattc 143  Q
    | ||||||||||||||    
T  27105191 atttttcatcgaattc 27105206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 42453804 - 42453890
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||| ||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  42453804 ttccatacattttattttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttcatcgaattcacaaca 42453890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 45279962 - 45279848
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  45279962 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 45279864  T
Q  129 attt-tcatcgaattc 143  Q
    |||| |||||||||||    
T  45279863 atttctcatcgaattc 45279848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 28196917 - 28197045
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||| || |||  ||||||||||||||||| | | ||||    
T  28196917 tctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgctggactatcccttgctccacacatcaaatttgttat 28197016  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| ||||||||||| ||||||||    
T  28197017 tggtgtgatttttcatcgaactcacaaca 28197045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 36558808 - 36558720
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||    
T  36558808 ttccatacgctttgttttggttgcttgattatcccttgctccacacatcaagt-tattattggtgtgatttttcatcgaattcacaacac 36558720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 21520657 - 21520534
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||| |||||| |  ||||||||||||  |||||||||| ||||||| |||||||||||||||||||| | ||||| |||    
T  21520657 gttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgttattggtg 21520558  T
Q  127 tgattt-tcatcgaattcacaaca 149  Q
    || ||| ||||||||||| |||||    
T  21520557 tgttttctcatcgaattcgcaaca 21520534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 22287328 - 22287181
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||| ||||  ||||  |||||| |  |||||||||| |||||||||||||||| |||  |||||||    
T  22287328 tgtgttctctcttcctttctctctcgctgttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatcccttgctc 22287229  T
Q  103 cacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  22287228 cacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 22287181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 13828300 - 13828177
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataacttccatacactttgtt-ttggttgcttgattattacttgctccacacatcaagtattttatt 122  Q
    |||| |||||||||||||||||| |||||| ||||||||  ||  ||| ||| | |||||||||||||||||  |||||||||||||||| |||||||||    
T  13828300 tctcccgttgttttctacttttg-tttgtgtttataactgtcacccacgttgatattggttgcttgattatt--ttgctccacacatcaaatattttatt 13828204  T
Q  123 tgtgtgattttcatcgaattcacaaca 149  Q
     |||||||||| | |||||||||||||    
T  13828203 ggtgtgatttttaacgaattcacaaca 13828177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 15539521 - 15539369
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||||||||||||||||| | ||||| ||||||   ||| ||||||||||||||| |||||||| || | |||||||    
T  15539521 tgtgttctctcttcctttctctctcgttgttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttga-taatccttgctc 15539423  T
Q  103 cacacatcaagtattttatttgtgtga------ttttcatcgaattcacaacac 150  Q
    |||||||||||| | ||||| ||||||      |||||||||||||||||||||    
T  15539422 cacacatcaagtttgttattggtgtgaggtgagttttcatcgaattcacaacac 15539369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 23452198 - 23452084
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||| | ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  23452198 cgttgttttctacttttagcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 23452100  T
Q  128 gattttcatcgaattc 143  Q
    ||||||||||||||||    
T  23452099 gattttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 22707743 - 22707595
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||| ||  ||||| |||||| |  ||||||||||||||||||||||||||||| || ||| |||    
T  22707743 tgtgttctctcttcctttctctctcgctgttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttccttactc 22707644  T
Q  103 cacacatcaagtattttatttgtgtgattt--tcatcgaattcacaaca 149  Q
    |||||||||| | | ||||| ||||| |||  ||||||||||| |||||    
T  22707643 cacacatcaaatttgttattggtgtggttttctcatcgaattcgcaaca 22707595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 42923480 - 42923351
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    |||||||||||||||||||||||  ||||| |||||| |  | ||||||||||||||| ||||||||||||||  ||||||||||||||||||| | |||    
T  42923480 tctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgtta 42923381  T
Q  121 tttgtgtgattt-tcatcgaattcacaaca 149  Q
    || ||||| |||  || |||||||||||||    
T  42923380 ttggtgtgttttcacaacgaattcacaaca 42923351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 7462912 - 7462826
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    |||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  7462912 gttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttgctccacacatcaagt 7462826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 13910006 - 13909881
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  13910006 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttactccacacatcaagt-tgttattggtgtg 13909908  T
Q  129 a--ttttc-atcgaattcacaacactt 152  Q
    |  ||||| |||||| |||||||||||    
T  13909907 actttttcgatcgaagtcacaacactt 13909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 146
Target Start/End: Complemental strand, 34979562 - 34979437
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||  || || |||||| |  |||||||||||| |||||||||||| |||||| ||| ||||||||||||||| | ||||    
T  34979562 tctctcgctgttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtttgttat 34979463  T
Q  122 ttgtgtgattt-tcatcgaattcaca 146  Q
    | ||||| ||| |||| |||||||||    
T  34979462 tggtgtgttttctcattgaattcaca 34979437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 22407446 - 22407346
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  |||||||    
T  22407446 tgtgttctctcttcctttctctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctc 22407347  T
Q  103 c 103  Q
    |    
T  22407346 c 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 45238978 - 45238842
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact-tccata--cactttg-ttttggttgcttgattattacttgctccacacatcaag 113  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||| |  |||  ||||| | |||||||||||||| |||  |||| |||||||||||||    
T  45238978 ttcttttctctcgctgttttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgcttggtccacacatcaag 45238879  T
Q  114 tattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | | ||||| |||||| |||||||||||||| |||||    
T  45238878 tttattattggtgtgatttttcatcgaattcgcaaca 45238842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 17848714 - 17848813
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||| |||||||||||||| ||||| | |||||| |  | ||||||||  | |||||||||||||||||| ||||||||||||||||||||    
T  17848714 ttcttttctctcgctgttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgctccacacatcaagt 17848813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24162184 - 24162063
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    || |||||||||| ||||||||||||||||||  ||| ||||||||||||||| | ||||| |||||    
T  24162184 cgttgttttctacttttggcttgtatttaattgtttcatacacttttttttggttgcttgattatctctttctccacacatcaagt-tgttattggtgtg 24162086  T
Q  129 --attttcatcgaattcacaaca 149  Q
      |||||||||| ||||||||||    
T  24162085 atattttcatcgtattcacaaca 24162063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 35107635 - 35107699
Alignment:
Q  82 ttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    ||||||||||||||||||| ||||| |||||||| |||||| |||||||||||| |||||||||||    
T  35107635 ttgcttgattattacttgcaccacatatcaagta-tttattggtgtgattttcaacgaattcacaa 35107699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 43623561 - 43623423
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatca 111  Q
    |||||||||||||   ||||||||||||||||| || || |||||| |  ||||||||||||  |||||||||| |||||||   |||||||||||||||    
T  43623561 ttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatca 43623462  T
Q  112 agtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||   ||||| |||||| |||||||||||||| |||||    
T  43623461 agttagttattggtgtgatttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 20146605 - 20146459
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattact 97  Q
    ||||||||| |||| |||||||||||||||||||||||||||||| | ||||| ||||||   ||||   ||  ||| | ||||||||||||||| |  |    
T  20146605 tttcgtgtgatctctctttcttttctctcgttgttttctactttt-gcttgtgtttataattgttcc---catgttgatattggttgcttgattact--t 20146512  T
Q  98 tgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | || |||||||||||||||||||| |||||| |||||| |||||||||||||    
T  20146511 tacttcacacatcaagtattttattggtgtgatttttcaacgaattcacaaca 20146459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 35217930 - 35217827
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||    
T  35217930 cgttgttttctacttttgacttgtatttaattattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtg 35217832  T
Q  129 atttt 133  Q
    |||||    
T  35217831 atttt 35217827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 40699709 - 40699777
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaac 148  Q
    |||||| ||||||||||  ||||||||||||||||||| ||||||  |||||||| |||||||||||||||    
T  40699709 ttggttacttgattatt--ttgctccacacatcaagtaatttattgatgtgatttccatcgaattcacaac 40699777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 45332098 - 45332020
Alignment:
Q  71 ctttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||| |||||  |||| |||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  45332098 ctttgttttggttgcttaattatcccttgttccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 45332020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 34575061 - 34574990
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||| |  ||| ||||||| |||||||||||||| |||||||||| | |||||||||||||    
T  34575061 ttttggttgcttgattaat--ttgttccacacgtcaagtattttattggtgtgatttttaacgaattcacaaca 34574990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 11739506 - 11739421
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||  || ||||| |||  ||||||| ||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  11739506 catacactttgtttttatttcttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 11739421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 38414155 - 38414028
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||||||||   ||||| |||||| |  ||||||||||||||||| ||||| | ||||| || ||||||||||| ||| | || | |    
T  38414155 tctctcgttgttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcacgtgctccacacaccaa-ttttgttt 38414057  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| ||||||| ||||||||||||    
T  38414056 tggtgtgatttttcatggaattcacaaca 38414028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 42064792 - 42064877
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||| | ||||  |||    |||||||||||||||||| |||||||||| ||  |||||||||||||||||||    
T  42064792 cgttgttttctactttttgcttgtatttaattgttccatacactttgttttagttgcttgatcatcccttgctccacacatcaagt 42064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 5375278 - 5375226
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||||||||| ||||||||||||  ||| |||||||||||||||    
T  5375278 ttccatacactttgttttgattgcttgattatcccttactccacacatcaagt 5375226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 15697376 - 15697445
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||| |||||||||| | | |||||||||    
T  15697376 ttttggttgcttgatta--aattgctctacacatcaagtattttattggtgtgatttttaacaaattcacaa 15697445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 33604255 - 33604324
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||| |  ||||| |||||||||||||||||||| ||||||| |||| | |||||||||||    
T  33604255 ttggttgcttgattaat--ttgcttcacacatcaagtattttattggtgtgatcttcaacaaattcacaaca 33604324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 35215511 - 35215450
Alignment:
Q  71 ctttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| ||||||||||    
T  35215511 ctttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttt 35215450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 7503125 - 7503194
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||| |  || ||||||||||||||||||||||| |||| ||||| | ||||||| |||||    
T  7503125 ttggttgcttgattaat--tttctccacacatcaagtattttattggtgtaatttttaacgaattcccaaca 7503194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 8173588 - 8173733
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattact 97  Q
    |||||||||||| | |||||||||||||||||||||| ||| ||| ||||||| ||||||   ||||   ||| ||| | ||||||||||||||| |  |    
T  8173588 tttcgtgtgttcactctttcttttctctcgttgttttttaccttt-gtttgtgtttataattgttcc---cacgttgatattggttgcttgattact--t 8173681  T
Q  98 tgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||| ||||  ||||||||||| |||||| |||||| |||||||||||||    
T  8173682 tgctccatacat-tagtattttattggtgtgatttttcaacgaattcacaaca 8173733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 39287423 - 39287475
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgat 130  Q
    |||| ||||||||||||  |||||||||||||||||| ||||||||| |||||||    
T  39287423 tttttgttgcttgatta--acttgctccacacatcaaatattttattggtgtgat 39287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 35028900 - 35028967
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    |||||||| ||| |||||||||  ||||||||||||| || ||||||||| |||||||||| | ||||||    
T  35028900 ttgttttgattgtttgattatt--ttgctccacacattaaatattttattggtgtgatttttaacgaatt 35028967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 41304433 - 41304359
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||| |||||||||||| |  ||| || |||| |||||||||||||| |||||| ||| | |||||||||||||    
T  41304433 ttgttttagttgcttgattaat--ttgttctacacgtcaagtattttattggtgtgacttttaacgaattcacaaca 41304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 43482770 - 43482720
Alignment:
Q  81 gttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||||||||| |  |||||||||| |||||||||||||||| |||||||||    
T  43482770 gttgcttgattaat--ttgctccacatatcaagtattttatttatgtgatttt 43482720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 10942411 - 10942379
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattt 132  Q
    ||||||||||||||||||||||| |||||||||    
T  10942411 ctccacacatcaagtattttattggtgtgattt 10942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 10948280 - 10948248
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattt 132  Q
    ||||||||||||||||||||||| |||||||||    
T  10948280 ctccacacatcaagtattttattggtgtgattt 10948248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 41302960 - 41302887
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaac 148  Q
    ||||||| |||||||||||| |  ||||| |||| || |||||||||||| |||| ||||| | ||||||||||||    
T  41302960 ttgttttagttgcttgattaat--ttgcttcacatataaagtattttattggtgtaatttttaacgaattcacaac 41302887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 561764 - 561633
Alignment:
Q  7 gtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccaca 106  Q
    |||||||| |||||| |||||||| ||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  561764 gtgttctctctttctcttctctcgatgttttctacttttgctt-gtgtttataacttccatacactttgttt-ggttgcttgattattacttactccaca 561667  T
Q  107 catcaagtattttatttgtgtgattttcatcgaa 140  Q
    |||||||||||||||| |||||||||||||||||    
T  561666 catcaagtattttattggtgtgattttcatcgaa 561633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 17795526 - 17795669
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||| ||| | |||||||||    
T  17795526 tgtgttctctctttcttttctctcgttgttttctacttttg-tttgtgattataacttccatacattttattttggttgcttgactatcagttgctccac 17795624  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||| | | ||||| |||||| ||||||||||||||||||||    
T  17795625 acatcaaatttattattggtgtgatttttcatcgaattcacaaca 17795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 19103966 - 19104109
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||||||| ||| | |||||||||    
T  19103966 tgtgttctctctttcttttctctcgttgttttctacttttg-tttgtgattataacttccatacattttattttggttgcttgactatcagttgctccac 19104064  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||| | | ||||| |||||| ||||||||||||||||||||    
T  19104065 acatcaaatttattattggtgtgatttttcatcgaattcacaaca 19104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 41849346 - 41849475
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttattt 123  Q
    |||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | |||||     
T  41849346 tctctcgttgttttctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattg 41849444  T
Q  124 gtgtgattttcatcgaattcacaacactttg 154  Q
    |||||||||||||||||||| ||||| ||||    
T  41849445 gtgtgattttcatcgaattcgcaacattttg 41849475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 31151654 - 31151754
Alignment:
Q  49 ttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaa 147  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  31151654 ttgtgtttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagta-tttattggtgtgatttttcatcgaattcacaa 31151752  T
Q  148 ca 149  Q
    ||    
T  31151753 ca 31151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 456206 - 456325
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  456206 cgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 456304  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  456305 attttcatcgaattcacaaca 456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 458583 - 458702
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  458583 cgttgttttctacttttggcttgtatttataactttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 458681  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  458682 attttcatcgaattcacaaca 458702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 23633720 - 23633862
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||||| | ||||||| |||    
T  23633720 tgtgttctctctttcttt-ctctcgatgttttctacttgtggcttgtgtttataaattccatacactttgttttggttgcttgattttcacttgcttcac 23633818  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||| |||| |||||| |||||| ||||||||||||||||||||    
T  23633819 acatctagta-tttattggtgtgatttttcatcgaattcacaaca 23633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 42990597 - 42990717
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| | ||||| |||||    
T  42990597 cgttgttttctacttttggcttgtatttataacttacatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 42990696  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  42990697 attttcatcgaattcgcaaca 42990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 27635632 - 27635514
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  27635632 ttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtt 27635533  T
Q  116 ttttatttgtgtgattttc 134  Q
    | ||||| |||||||||||    
T  27635532 tgttattggtgtgattttc 27635514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 880430 - 880313
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||||     
T  880430 ttcttttctctcgctgttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgattaatccttgctccacacatcaagtt 880331  T
Q  116 ttttatttgtgtgatttt 133  Q
    | ||||  ||||||||||    
T  880330 tgttatgggtgtgatttt 880313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 28761415 - 28761286
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    |||||||||||||||||||||||||| || ||| |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||  | |||    
T  28761415 ttttctctcgttgttttctacttttgctt-gtgattataatttccatacactttattttggttgtttgattatcacttgctccacacatcaagattatta 28761317  T
Q  121 tttgtgtga-ttttcatcgaattcacaacac 150  Q
    || |||||| |||||||||||||||||||||    
T  28761316 ttggtgtgatttttcatcgaattcacaacac 28761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 880219 - 880090
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataac--ttccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||||  ||||||||||||| ||| |||||||||||||||     
T  880219 ttcttttctctcgttgttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattccttactccacacatcaagtt 880120  T
Q  116 ttttatttgtgtga--ttttcatcgaattc 143  Q
    | ||||| ||||||  ||||||||||||||    
T  880119 tattattggtgtgactttttcatcgaattc 880090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 1313687 - 1313824
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||  ||||| |||||| |  ||||||||||||||||||||||||||| |||  |||||||||||||||||||     
T  1313687 ttcttttctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 1313786  T
Q  116 ttttatttgtgtga--ttttcatcgaattcacaacact 151  Q
    | ||||| ||||||  |||||||||||||| |||||||    
T  1313787 tgttattggtgtgagtttttcatcgaattcgcaacact 1313824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 747057 - 747180
Alignment:
Q  30 gttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    |||||||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  747057 gttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 747155  T
Q  129 a-ttttcatcgaattcacaacactt 152  Q
    | |||||||||||||||||||||||    
T  747156 atttttcatcgaattcacaacactt 747180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10955986 - 10955867
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  10955986 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 10955888  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  10955887 attttcatcgaattcacaaca 10955867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 32219352 - 32219503
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  ||||||||||||| ||||||||||||||||||  ||||    
T  32219352 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttg 32219451  T
Q  100 ctccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| | ||||||||||||  ||||||||||||||||||||    
T  32219452 ctccacacatcaagtttgttatttgtgtgattttttcatcgaattcacaaca 32219503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 25635643 - 25635788
Alignment:
Q  1 tttcgtgtgttctcg-ctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttg 99  Q
    ||||||||||||||  |||||||| | |||||||||||||||||||| || ||| ||||||||   |  ||||| || ||||||||||||||||||||||    
T  25635643 tttcgtgtgttctcttctttcttt-cactcgttgttttctacttttgctt-gtgtttataactgttacccactt-gtattggttgcttgattattacttg 25635739  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  25635740 ctccacacatcaagta-tttattagtgtgattttcatcgaattcacaaca 25635788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 1321777 - 1321897
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||||||||| |||||||  ||||||||||||||||||| | ||||| |||||    
T  1321777 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 1321876  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  1321877 attttcatcgaattcgcaaca 1321897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10958282 - 10958163
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||| ||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  10958282 cgttgttttctacttttggcttgtatttaattgttctatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 10958184  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  10958183 attttcatcgaattcacaaca 10958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 32264028 - 32263881
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||  ||||||| ||||||||    
T  32264028 tgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcacttgctc 32263929  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||| | | ||||| |||||| ||||| ||||||||||||||    
T  32263928 cacacatcaaatttgttattagtgtgatttttcttcgaattcacaaca 32263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 12267965 - 12267819
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctcc 103  Q
    ||||||||| |||  || |||||||||||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||| | ||||||    
T  12267965 tgtgttctctcttctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactattccctgctcc 12267866  T
Q  104 acacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||| | | ||||| |||| | |||||||||| |||||||||    
T  12267865 acacatcaaatttgttattggtgtaatttttcatcgagttcacaaca 12267819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 24181669 - 24181760
Alignment:
Q  69 cactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaacactttggtagga 160  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||||    
T  24181669 cactttattttggttgcttgattattaatttctccacacatcaagtattttattagtgtgattttcttcgaattcacaacagtttgttagga 24181760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 43421394 - 43421260
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||| ||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  ||||||||||||||||| |     
T  43421394 ttcttttctctcgctgttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatatcttgctccacacatcaactt 43421295  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | ||||| |||||| |||||||||||||| |||||    
T  43421294 tgttattggtgtgatttttcatcgaattcgcaaca 43421260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 43423442 - 43423308
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||| |||  ||||||||||||||||| |     
T  43423442 ttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaactt 43423343  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | ||||| |||| | |||||||||||||| |||||    
T  43423342 tgttattggtgtaatttttcatcgaattcgcaaca 43423308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 42992705 - 42992799
Alignment:
Q  55 ttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||  |||||||  ||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||    
T  42992705 ttataacttccatacactttgttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtgattttcatcgaattcacaaca 42992799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 5191951 - 5192062
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgat 130  Q
    ||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||||    
T  5191951 ttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgat 5192049  T
Q  131 tttcatcgaattc 143  Q
    |||||||||||||    
T  5192050 tttcatcgaattc 5192062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 10621488 - 10621366
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg--ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    ||||||||||||||||||| ||||  ||||||||| |||||||||||  |||||||||||| |||||  ||||||||||||||||||| | ||||| |||    
T  10621488 cgttgttttctacttttggcttgtatttataactttcatacactttggtttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtg 10621390  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| ||||||||||||||||||||    
T  10621389 tgatttttcatcgaattcacaaca 10621366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 22114258 - 22114143
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt 132  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||| |  |||| |||||||||    
T  22114258 ttttctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgctattggtgtgattt 22114160  T
Q  133 tcatcgaattcacaaca 149  Q
    ||||||||||| |||||    
T  22114159 tcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 26720844 - 26720928
Alignment:
Q  28 tcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    ||||| |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  26720844 tcgttcttttctacttttggcttgtatttataacttccatacactttgttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 4308271 - 4308122
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  |||||||||||||||||||||| | ||||||| |||||    
T  4308271 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttggattattccttgc 4308172  T
Q  101 tccacacatcaagtattttatttgtgtg--attttcatcgaattcacaaca 149  Q
    |||||||||||||| | ||||| |||||  ||||||||||||||| |||||    
T  4308171 tccacacatcaagt-tgttattggtgtgatattttcatcgaattcgcaaca 4308122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 6065754 - 6065633
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||||||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  6065754 cgttgttttctacttttggcttgtatttataactttcatacactttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 6065656  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  6065655 gatttttcatcgaattcgcaaca 6065633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 36012094 - 36012245
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| |||  ||||||||||   ||||||||||||||| | ||||| |||||| |  |||||||||||||||||||||| ||||||||  |||||    
T  36012094 tgtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattatcccttgc 36012193  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacact 151  Q
    |||| ||||||||| | ||||| |||||| |||||||||||||| |||||||    
T  36012194 tccatacatcaagtttgttattggtgtgatttttcatcgaattcgcaacact 36012245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 53893980 - 53893887
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttc-atcgaattcacaacactttgg 155  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||| |||||||| ||||||||||||    
T  53893980 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttcgatcgaatttacaacactttgg 53893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 3314952 - 3315100
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||||||| |||||||||| ||||| ||||| |||||| |  ||||||||||||| ||||||||||||||||||  ||||||    
T  3314952 tgtgttctctcttcctttctctctcgctgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgct 3315051  T
Q  102 ccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||| | ||||| ||||| ||| ||||||||||| |||||    
T  3315052 ccacacatcaagtttattattggtgtgttttctcatcgaattcgcaaca 3315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 5522586 - 5522466
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| | ||||||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| ||||    
T  5522586 cgttgttttctacttttggcttgtatttataactttcttacactttgattttggttgcttgactatcccttgctccacacatcaagt-tgttattggtgt 5522488  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||| ||||||| |||||    
T  5522487 gattttcaacgaattcgcaaca 5522466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 10084348 - 10084224
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    | ||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  10084348 cgttgttttctacttttggcttgtatttaattgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 10084250  T
Q  129 attttcatcgaattcacaacactttg 154  Q
    |||||||||| |||| ||||| ||||    
T  10084249 attttcatcggattcgcaacagtttg 10084224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 11168399 - 11168519
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  11168399 cgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 11168497  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  11168498 gattttcatcgaattcgcaaca 11168519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 15781165 - 15781293
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||||||  ||||| ||||||||  |||||||||||| |||||  |||||||||||  ||| ||||||||||||||| | ||||    
T  15781165 tctctcgttgttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatcccttactccacacatcaagtttgttat 15781264  T
Q  122 ttgtgtgatttt-catcgaattcacaaca 149  Q
    | ||||| |||| ||||||||||||||||    
T  15781265 tggtgtgtttttccatcgaattcacaaca 15781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 45883223 - 45883359
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||| | |||||||||||| ||| ||||| |||||| |  ||||||||||||||||||||||||| | |||  |||||||||||||||||||     
T  45883223 ttcttttctcttgctgttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactatcccttgctccacacatcaagtt 45883322  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaacact 151  Q
    | ||||| |||||| |||||||||||||  |||||||    
T  45883323 tgttattggtgtgatttttcatcgaatttgcaacact 45883359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 1626673 - 1626542
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||||||||||  |||||||  ||||| |||||| |  ||||||||||||||||| |||||||||||||| |||||||    
T  1626673 tgtgttctctcttcctttctctctcgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattccttgctc 1626574  T
Q  103 cacacatcaagtattttatttgtgtgattttc 134  Q
    |||||||||||| | ||||| ||||| |||||    
T  1626573 cacacatcaagtttgttattggtgtggttttc 1626542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 53917643 - 53917506
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||| |  | ||||||||||||||||||||||||| |||  |||||||||||||||||    
T  53917643 ttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaa 53917544  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | ||||| |||||| |||||||||| ||| |||||    
T  53917543 gtttgttattagtgtgatttttcatcgatttcgcaaca 53917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 24979975 - 24980126
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgtt----ttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattactt 98  Q
    ||||||||| |||  |||||||||||||||    |||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  |||    
T  24979975 tgtgttctctcttctttttctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatccctt 24980074  T
Q  99 gctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    |||||||||||||||| | ||||| ||||| ||| |||||||||||||||||    
T  24980075 gctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 27101171 - 27101021
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgc 100  Q
    ||||||||| ||| ||||||||| |   ||||||||||||||| | ||||| |||||| |  ||||||||||||||||||||||| ||||||||  ||||    
T  27101171 tgtgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgattattcattgc 27101072  T
Q  101 tccacacatcaagtattttatttgtgtg--attttcatcgaattcacaacac 150  Q
    |||||||||||||| | ||||| |||||  ||||||||||||||||| ||||    
T  27101071 tccacacatcaagt-tgttattggtgtgatattttcatcgaattcacgacac 27101021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 36871296 - 36871149
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||| |||||||||| |||||||||  ||| | ||||| ||||||||  ||  ||| |||||||||||||||||||||| |||||    
T  36871296 tttcgtgtgttctctctttattttctctcgctgttttctatcttttgcttgtgtttataactgtcacccac-ttgttttggttgcttgattatt-cttgc 36871199  T
Q  101 tccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||  ||||||  |||||| |||||||||||||    
T  36871198 tccacacatcaagta-tttatcggtgtgattttttcaacgaattcacaaca 36871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 50494297 - 50494419
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||    
T  50494297 cgttgttttctacttttggcttgtatttaattattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtg 50494395  T
Q  129 a-ttttcatcgaattcacaacact 151  Q
    | ||||||||||||||||||||||    
T  50494396 atttttcatcgaattcacaacact 50494419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 51943653 - 51943751
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| |  |||| |||||||||||||||||||||| |||  |||||||||||||||||||    
T  51943653 ttcttttctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactatcccttgctccacacatcaagt 51943751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 53597499 - 53597644
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgtt-ttggttgcttgattattact 97  Q
    |||||||||||||| | ||  ||||||||||||||||||| ||||| || ||| ||||||  |||||   ||| ||| | |||||||||||||||||  |    
T  53597499 tttcgtgtgttctctcctttctttctctcgttgttttctatttttgctt-gtgtttataattcttcc---cacgttgatattggttgcttgattatt--t 53597592  T
Q  98 tgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  53597593 tgctccacacataaagtattttattggtgtgattttcatcgaattcacaaca 53597644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 10191271 - 10191147
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    | ||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  10191271 cgttgttttctacttttggcttgtatttaattgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 10191173  T
Q  129 attttcatcgaattcacaacactttg 154  Q
    |||||||||  |||| ||||| ||||    
T  10191172 attttcatcagattcgcaacagtttg 10191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 150
Target Start/End: Complemental strand, 18096863 - 18096739
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  ||||||||||||||||||| | ||||| |||    
T  18096863 gttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtg 18096764  T
Q  127 tga-ttttcatcgaattcacaacac 150  Q
    | | |||||||||||||| ||||||    
T  18096763 taatttttcatcgaattcgcaacac 18096739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 28412989 - 28412870
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  ||||||||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||| | ||||| |||||    
T  28412989 cgttgttttctacttttgacttgtatttataactttcatacactt-gttttggttacttgattatcccttgctccacacatcaagt-tgttattggtgtg 28412892  T
Q  129 -attttcatcgaattcacaaca 149  Q
      ||||||||||||||||||||    
T  28412891 ttttttcatcgaattcacaaca 28412870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 47701653 - 47701526
Alignment:
Q  16 ctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    ||||| |||||||| ||||||||||||||||| ||||| | |||| |  ||||||||||||||||| ||||||||||||||||||| |   |||||||||    
T  47701653 ctttcctttctctcattgttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgattattacttgat---cacatcaag 47701557  T
Q  114 tattttatttgtgtga-ttttcatcgaattc 143  Q
    | | ||||| |||||| ||||||||||||||    
T  47701556 tttgttattggtgtgatttttcatcgaattc 47701526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 18099133 - 18099010
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||| ||| || |  ||||||||||||| |||| |||||||||||||  ||||||||||||||||||| | ||||| |||    
T  18099133 gttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgttattggtg 18099034  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| |||||||||||||| |||||    
T  18099033 tgatttttcatcgaattcccaaca 18099010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 25634219 - 25634294
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||| |||||||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||    
T  25634219 ttgtattggttgcttgattattacttgctccccacattaagta-tttattggtgtgattttcatcgaattcacaaca 25634294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 53915475 - 53915338
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   ||||||||||||||||| ||||| |||||| |  | ||||||||| ||||||||||||||| |||  ||||||||| |||||||    
T  53915475 ttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttgactatcccttgctccatacatcaa 53915376  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | ||||| |||||| |||||||||||||| |||||    
T  53915375 gtttgttattggtgtgatttttcatcgaattcgcaaca 53915338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 5926736 - 5926611
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||||||||| || ||| |||||| |  ||| ||||||||||||||||| |||||||||| ||| || ||||||| |||| | ||||    
T  5926736 tctctcgttgttttctacttttgctt-gtgtttataattgttccttacactttgttttggttacttgattattccttacttcacacatgaagtttgttat 5926638  T
Q  122 ttgtgtga-ttttcatcgaattcacaa 147  Q
    | |||||| ||||||||||||||||||    
T  5926637 tggtgtgagttttcatcgaattcacaa 5926611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 28101992 - 28101848
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctcc 103  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||  | | | || ||||||| ||||||||||||||||||  ||||||||    
T  28101992 tgtgttctctcttcctttctctctcgctgttttctacttttgggttgtgttta--attgctatccactttgattttggttgcttgattatcccttgctcc 28101895  T
Q  104 acacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||| | ||||| |||| | ||||||||||||||||||||    
T  28101894 acacatcaagtttattattggtgtaatttttcatcgaattcacaaca 28101848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 28181282 - 28181418
Alignment:
Q  18 ttcttttctct--cgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaag 113  Q
    |||||||||||  || |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||| ||||||  | ||||||||||||||||||    
T  28181282 ttcttttctctgtcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgatt-gtccttgctccacacatcaag 28181380  T
Q  114 tattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    | | ||||| |||||| ||||  |||||||||||||||    
T  28181381 tttgttattggtgtgatttttgttcgaattcacaacac 28181418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 48361645 - 48361567
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattatt 94  Q
    |||||||||||||||||||||||||||||  ||||| |||||| |  ||||||||||||||||||||||||||||||||    
T  48361645 ttcttttctctcgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattatt 48361567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 5886496 - 5886599
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||| ||||  ||||||||||||||||||| | ||||| ||||    
T  5886496 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaagt-tgttattggtgt 5886593  T
Q  128 gatttt 133  Q
    ||||||    
T  5886594 gatttt 5886599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 5899969 - 5900072
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||| ||||  ||||||||||||||||||| | ||||| ||||    
T  5899969 gttgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaagt-tgttattggtgt 5900066  T
Q  128 gatttt 133  Q
    ||||||    
T  5900067 gatttt 5900072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 6484644 - 6484773
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||  ||||| |||||| |  ||||||||||||| |||||||||||| |||||| ||||||||||||||||| | | |||    
T  6484644 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgtta 6484743  T
Q  121 tttgtgtga-ttttcatcgaattcacaaca 149  Q
    || |||||| |||| || ||||||||||||    
T  6484744 ttagtgtgattttttattgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 25389238 - 25389326
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga--ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| || |||  ||||||||||||||||||||    
T  25389238 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtatgattttttcatcgaattcacaaca 25389326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 6232067 - 6232208
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctcc 103  Q
    ||||||||| |||  || ||||||| |||||| || |||||  ||||| |||||| |  |||||||||||| ||||||||||||||||||||    ||||    
T  6232067 tgtgttctctcttctttctctctcgctgttttttatttttgacttgtgtttataattgttccatacactttattttggttgcttgattatta----ctcc 6232162  T
Q  104 acacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||| | | ||||| |||||||||||||||||||| |||||    
T  6232163 acacatcaaatttgttattagtgtgattttcatcgaattcgcaaca 6232208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 25533723 - 25533842
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||| |||  ||||||||||||||||||| | ||||| |||||    
T  25533723 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttga-tatctcttgctccacacatcaagt-tgttattggtgtg 25533820  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| |||||    
T  25533821 atttttcatcgaattcgcaaca 25533842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 51726966 - 51726847
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||||||||| |||||||||| |||||||| ||||| ||||||||||||| | ||||| ||||    
T  51726966 cgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatt-cttgccccacacatcaagt-tgttattggtgt 51726869  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  51726868 gattttcatcgaattcgcaaca 51726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 4103855 - 4103736
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||| ||||||||   |||  |||||||||||||||||||| ||| ||||| |||| |||  |||||||||| |||||||| | ||||| |||||    
T  4103855 cgttgttttttacttttgacatgtatttataacttccatacactttttttcggttgtttgactatc-cttgctccacgcatcaagtttgttattggtgtg 4103757  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  4103756 attttcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 9604583 - 9604447
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaa 112  Q
    |||||||||||||   |||||||||| ||||||  |||| |||||| |  | ||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  9604583 ttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgattattccttgctccacacatcaa 9604484  T
Q  113 gtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    || | ||||| |||||| |||||||||||||| |||||    
T  9604483 gt-tgttattggtgtgatttttcatcgaattcgcaaca 9604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 11170670 - 11170788
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    ||||||||||||||||| ||||  |||    |||||||||||||| ||||||||||||||||||  ||| ||||||||||||||| | |||||  |||||    
T  11170670 ttgttttctacttttggcttgtatttaattattccatacactttgattttggttgcttgattatcccttactccacacatcaagt-tgttattaatgtga 11170768  T
Q  130 ttttcatcgaattcacaaca 149  Q
    |||||||||||||| |||||    
T  11170769 ttttcatcgaattcgcaaca 11170788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 140
Target Start/End: Original strand, 43228618 - 43228696
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt-tcatcgaa 140  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||| ||||||||    
T  43228618 ttccatacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttctcatcgaa 43228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 51674737 - 51674608
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||| ||||| |||||  |  ||||||| |  |  |||||||||||||||||| ||||||||| ||||||||| | ||||    
T  51674737 tctctcgctgttttctacttttggcttgtgtttatatttgttccatacccacttgtttggttgcttgattattccttgctccatacatcaagtttgttat 51674638  T
Q  122 ttgtgtgattt--tcatcgaattcacaaca 149  Q
    | |||||||||  |||||||||||||||||    
T  51674637 tggtgtgattttctcatcgaattcacaaca 51674608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 6063404 - 6063283
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| ||||| |||||||||||| |||||  |||| |||||||||||||| | ||||  ||||    
T  6063404 cgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgttccacacatcaagt-tgttatcggtgt 6063306  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  6063305 gatttttcatcgaattcgcaaca 6063283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 43226350 - 43226495
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgtt--ttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| ||||||||||| ||||  |||||||||||| ||||  || ||| |  ||||||||||| |||||||||||||||||||  ||||||    
T  43226350 tgtgttctctcttccttttctctcgctgttgtttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttgct 43226447  T
Q  102 ccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||| | ||||| ||||||||| ||||||||||| |||||    
T  43226448 ccacacatcaagt-tgttattggtgtgatttctcatcgaattcgcaaca 43226495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 47148885 - 47148745
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| |||||||||||||||||||||||  ||||| |||||| |  |||||||||||||||||||||| ||||||||        |    
T  47148885 tgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattat-------cc 47148793  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| |||||| |||||||| |||||||||||    
T  47148792 cacacatcaagtttgttattggtgtgagttttcatcaaattcacaaca 47148745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 18162960 - 18163080
Alignment:
Q  33 gttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga 129  Q
    ||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| |||||||  ||| ||||||||||||| | | ||||| ||||||    
T  18162960 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtga 18163059  T
Q  130 -ttttcatcgaattcacaaca 149  Q
     ||||||||||||||| ||||    
T  18163060 tttttcatcgaattcataaca 18163080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 38210669 - 38210789
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    |||||||| |||||||||| ||| ||||| ||  ||||||||||||||||||| | ||||| |||||    
T  38210669 cgttgttttctacttttggcttgtatttaattattccatacgctttgttttgtttgtttgataatcccttgctccacacatcaagt-tgttattggtgtg 38210767  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  38210768 atttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 25688150 - 25688021
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttg---ttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| ||| ||||||||||||||   |||||||||||||| ||||| ||| || |  ||||||||||||| |||||||||  ||||||| |||||    
T  25688150 tgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttg 25688051  T
Q  100 ctccacacatcaagtattttatttgtgtga 129  Q
    |||||||||| |||| | ||||| ||||||    
T  25688050 ctccacacataaagtttgttattggtgtga 25688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 53468443 - 53468312
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| | |||||||||||||  ||||| |||||| |  ||||||||||||||||||| ||||  ||||||  ||||||    
T  53468443 tgtgttctctcttcctttctctctcgctattttctacttttgacttgtgtttataattgttccatacactttgttttggctgctccattattcattgctc 53468344  T
Q  103 cacacatcaagtattttatttgtgtgattttc 134  Q
    |||||||||||| | ||||| ||||| |||||    
T  53468343 cacacatcaagtttgttattggtgtggttttc 53468312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 53591463 - 53591597
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    ||||||||||||| |||||||| ||||||  || || |||||| |  |||||||| ||||||||||||||||||||||  |||| |||||||||||| |     
T  53591463 ttcttttctctcgctgttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgattatcccttgttccacacatcaaatt 53591562  T
Q  116 ttttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    | |||||  |||| ||| |||| ||||||||||||    
T  53591563 tgttattgatgtgttttctcattgaattcacaaca 53591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 54691538 - 54691417
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| |||||| |  | |||||| |||||||||||||| ||||||| ||||||||||||||| || | | |||||  |||    
T  54691538 gttgttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatcacttgctccacacat-aaatttgttattgatgt 54691440  T
Q  128 gattt-tcatcgaattcacaaca 149  Q
    | ||| |||||||||||||||||    
T  54691439 gttttctcatcgaattcacaaca 54691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 4666800 - 4666911
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||| ||||||||||||||  |||||| |  | |||||||||| |||||||||| |||| || |||| ||||||||||||| | | ||||    
T  4666800 tctctcgctgttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcacttactccacacatcaaatttattat 4666899  T
Q  122 ttgtgtgatttt 133  Q
    | ||||||||||    
T  4666900 tggtgtgatttt 4666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 14634339 - 14634291
Alignment:
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||    
T  14634339 tccacacatcaagtattttattggtgtgattttcaacgaattcacaaca 14634291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 38890338 - 38890441
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  38890338 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 38890436  T
Q  128 gattt 132  Q
    |||||    
T  38890437 gattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 3307027 - 3307176
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgct 101  Q
    ||||||||| ||| |||| ||| ||| |||||||||||||||| ||||| ||||||   || ||||||||||| ||||| ||| ||||||||  ||||||    
T  3307027 tgtgttctctcttcctttctctttcgctgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgct 3307126  T
Q  102 ccacacatcaagtatt-ttatttgtgtgattt-tcatcgaattcacaaca 149  Q
     || ||||||||| || ||||| ||||| ||| |||||||||||||||||    
T  3307127 tcatacatcaagttttgttattggtgtgttttctcatcgaattcacaaca 3307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 1620452 - 1620329
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    |||||||||| | ||||||| |||||| ||||||||||||| | ||||| ||||||||  ||  ||| ||||||||||||||||||||  | || |||||    
T  1620452 gtgtgttctctcattcttttatctcgtggttttctactttt-gcttgtgtttataactgtcacccac-ttgttttggttgcttgatta--attttctcca 1620357  T
Q  105 cacatcaagtattttatttgtgtgatttt 133  Q
    || ||||||| ||||||| ||||||||||    
T  1620356 catatcaagt-ttttattggtgtgatttt 1620329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 7606530 - 7606450
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaatt 142  Q
    |||||||||||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| ||||  |||||||||||||    
T  7606530 ttccatacactttgattttggttgcttgactatctcttgctccacacatcaagt-tgttattggtgtatttttcatcgaatt 7606450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 21702895 - 21702960
Alignment:
Q  82 ttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||  |||| ||||||||||||||||||||| || |||||||||  ||||||||||||    
T  21702895 ttgcttgattatt--ttgcaccacacatcaagtattttattggtatgattttcaaagaattcacaaca 21702960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 31021061 - 31021012
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||| ||||||||||   |||||||||||||    
T  31021061 ctccacacatcaagtattttattggtgtgatttttgacgaattcacaaca 31021012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 36957651 - 36957719
Alignment:
Q  80 ggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||  ||||||||||||||||||| | |||||  | |||||||||||||||||| ||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaagt-tgttattgatatgattttcatcgaattcagaaca 36957719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 11066923 - 11066995
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaa 147  Q
    |||||||||||||||||||| |  |||||| ||| | ||||||||||||| | |||||||| | |||||||||||    
T  11066923 ttgttttggttgcttgattaat--ttgctcgacaaaacaagtattttattggggtgatttttaacgaattcacaa 11066995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 42992563 - 42992606
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacact 72  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||    
T  42992563 cgttgttttctacttttggcttgtatttataacttccatacact 42992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 3859845 - 3859930
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttc-atcgaattcacaaca 149  Q
    ||||||||||||||||||||||| | |||  |||  |||||||||||||| | ||||| |||||| ||||| |||||||||||||||    
T  3859845 catacactttgttttggttgcttaactatcccttattccacacatcaagt-tgttattggtgtgacttttcgatcgaattcacaaca 3859930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 16643 - 16501
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctcca 104  Q
    ||||||| || ||||||||||||||||||||||||| ||||| || ||  ||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  16643 gtgtgttttctctttcttttctctcgttgttttctatttttgctt-gtatttataacttccatgcactttgtttag-ttgcttgattattacttgctcca 16546  T
Q  105 cacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||| || | ||||| |||||||||||||||    
T  16545 cacatcaagtattttattggtataatttttatcgaattcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 69253 - 69133
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||||| | ||||| |||||    
T  69253 cgttgttttctacttttggcttgtatttataacttccatacattttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 69154  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  69153 attttcatcgaattcacaaca 69133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 14376 - 14231
Alignment:
Q  6 tgtgttctcgctttcttt-tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    ||||||||| ||| |||| ||||||| |||||||||||||||| ||||| |||||| |  |||||||||||||||||||||||||||||||  |||||||    
T  14376 tgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctc 14277  T
Q  103 cacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||    
T  14276 cacacatcaagt-tgttattggtgtgattttcatcgaattcacaaca 14231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 24338429 - 24338295
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagta 115  Q
    |||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||| |||  |||||||||||||||||||     
T  24338429 ttcttttctctcgttgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctccacacatcaagtt 24338330  T
Q  116 ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||  ||||| ||||||||||||||||||||    
T  24338329 tgttattgatgtgatttttcatcgaattcacaaca 24338295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 15346663 - 15346813
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattactt 98  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||| ||||| |||||| |  |||||| |||||||||||||||||||||||| ||||    
T  15346663 tttcgtgtgttctctctttcttt-ctcttgttgttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcactt 15346761  T
Q  99 gctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||||||||||| | ||||| |||||| ||||||||||||| ||||||    
T  15346762 gttccacacatcaagtttgttattggtgtgatttttcatcgaatttacaaca 15346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 15367352 - 15367498
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctc 102  Q
    |||||||||| |||||||| |||||||  |||||||||||||| ||||| |||||| |  ||||||||||||||||||||||||||||||| || |||||    
T  15367352 gtgtgttctctctttcttt-ctctcgtatttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctc 15367450  T
Q  103 cacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  15367451 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 15367498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 3027849 - 3027702
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||  ||||  ||||||||||||||||||||  |||||||||| |||||||||||||    
T  3027849 tttcgtgtgttctctctttcttt-ctctcgttgttttctacttttgacttgtatttataacttccatacacttt-atttggttgctcgattattacttgc 3027752  T
Q  101 tccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||||||| || |||||  |||||| ||||||| |||||||||||||    
T  3027751 tccacacatcaaata-tttatcggtgtgatttttcattgaattcacaacac 3027702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 2628847 - 2628727
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  2628847 cgttgttttctacttttggcttgtatttataacttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 2628749  T
Q  128 gattttcatcgaattcacaaca 149  Q
    |||||||||||||||| |||||    
T  2628748 gattttcatcgaattcgcaaca 2628727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 17012387 - 17012502
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttt 132  Q
    |||||||||||||| ||||| || |||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||    
T  17012387 ttttctacttttggcttgtgttt-taacgttcatacactttgttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatttt 17012485  T
Q  133 tcatcgaattcacaaca 149  Q
    |||||||||||||||||    
T  17012486 tcatcgaattcacaaca 17012502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 3629846 - 3629710
Alignment:
Q  18 ttcttttctctcgttgttttctactttt-ggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 114  Q
    |||||||||||||||||||||||||||| || ||||| |||||| |  |||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  3629846 ttcttttctctcgttgttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagt 3629747  T
Q  115 attttatttgtgtgattt-tcatcgaattcacaacac 150  Q
     | ||||| ||||| ||| ||||||||||||||||||    
T  3629746 ttgttattggtgtgttttctcatcgaattcacaacac 3629710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 26945462 - 26945593
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgc 100  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||| ||||||||| |||| ||  ||||||||||||||     
T  26945462 tttcgtgtcttctctctttcttttctctcgctgttttctacttttggcttgtgtttataacttccttacactttg-tttgattctttgattattacttgt 26945560  T
Q  101 tccacacatcaagtattttatttgtgtgatttt 133  Q
    | |||| ||||||| ||||||| ||||||||||    
T  26945561 ttcacatatcaagtgttttattggtgtgatttt 26945593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 11982993 - 11982872
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||| || ||| |  |||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| ||||    
T  11982993 gttgttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagt-tgttattggtgt 11982895  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  11982894 gatttttcatcgaattcacaaca 11982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 3631915 - 3631784
Alignment:
Q  21 ttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattt 118  Q
    |||||||||| |||||||||||||||| ||||| |||||| |  ||||||||||||||||||||||| | ||||| ||||||||||||| |||||| | |    
T  3631915 ttttctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcacttgctccacacgtcaagtttgt 3631816  T
Q  119 tatttgtgtg-attttcatcgaattcacaaca 149  Q
    |||| |||||  ||||||||||||||||||||    
T  3631815 tattggtgtgttttttcatcgaattcacaaca 3631784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 28241282 - 28241163
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  28241282 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 28241184  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  28241183 attttcatcgaattcacaaca 28241163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19696758 - 19696889
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgtttt-ctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttg 99  Q
    |||||||||||||| |||||||| |||||| |||||| ||||||||| |||||| ||||||||  ||  |||||||||| ||||||||||||| |  |||    
T  19696758 tttcgtgtgttctctctttcttt-ctctcgctgtttttctacttttg-tttgtgtttataactgtcacccactttgtttcggttgcttgattact--ttg 19696853  T
Q  100 ctccacacatcaagtattttatttgtgtgattttca 135  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19696854 ctccacacatcaagtattttattggtgtgattttca 19696889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 26932518 - 26932403
Alignment:
Q  34 ttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttt 132  Q
    |||||||| ||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| |||    
T  26932518 ttttctacctttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 26932420  T
Q  133 tcatcgaattcacaaca 149  Q
    ||||| |||||||||||    
T  26932419 tcatcaaattcacaaca 26932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 12195475 - 12195353
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||||||||| ||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  12195475 cgttgttttctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 12195377  T
Q  128 ga-ttttcatcgaattcacaacac 150  Q
    || |||||||||||||||||||||    
T  12195376 gatttttcatcgaattcacaacac 12195353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 15719960 - 15720105
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacacttt-gttttggttgcttgattattacttg 99  Q
    |||| ||||||||| ||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||  ||||| |||||||| ||| |||      
T  15719960 tttcatgtgttctctctttcttttctctcgctgttttcta-tttttgtttgtgattataacttccatacactttatttttgattgcttgactatcact-- 15720056  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
     |||||||||||||| | |||||   ||||||||||||||||||| ||||    
T  15720057 -tccacacatcaagtttattattgacgtgattttcatcgaattcataaca 15720105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 145
Target Start/End: Original strand, 14466674 - 14466787
Alignment:
Q  32 tgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-t 130  Q
    ||||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||| ||| ||||||| |||||||||| | | ||||| |||||| |    
T  14466674 tgttttctacttttg-tttgtgattataactttcatacattttgttttggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgatt 14466772  T
Q  131 tttcatcgaattcac 145  Q
    |||||||||||||||    
T  14466773 tttcatcgaattcac 14466787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 5273177 - 5273054
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  ||| || || ||||||||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  5273177 cgttgttttctacttttggcttgtatttaaaaattacatacactttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 5273079  T
Q  128 ga--ttttcatcgaattcacaacac 150  Q
    ||  |||||||||||||||||||||    
T  5273078 gattttttcatcgaattcacaacac 5273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 14507137 - 14507025
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  14507137 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 14507039  T
Q  129 attttcatcgaatt 142  Q
    || |||||||||||    
T  14507038 atattcatcgaatt 14507025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 9020276 - 9020398
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    |||||||||||||||||| ||||  |||||| |  ||||||||||||||||||||||  |||||||  ||||||||||||||||||| | ||||| ||||    
T  9020276 gttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattatctcttgctccacacatcaagtttgttattggtgt 9020375  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || |||||||||||||| |||||    
T  9020376 gatttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 22610994 - 22611138
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataact--tccatacactttgtt-ttggttgcttgattattact 97  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||| || ||| |||||| |  |||   ||||||| | |||||||||||||||||  |    
T  22610994 tttcgtgtgttctctctttctttt-tctcattgttttctacttttgctt-gtgtttataattgttcc---cactttgatattggttgcttgattatt--t 22611086  T
Q  98 tgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  22611087 tgctccacacatcaagtattttattggtgtgattttcatcgaactcgcaaca 22611138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 149
Target Start/End: Complemental strand, 30034562 - 30034447
Alignment:
Q  31 ttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgat 130  Q
    ||||||||||||||| | ||||  ||||||||| ||||||||||| |||||||||||||||| | ||||||||| ||||||||| | ||||| |||||||    
T  30034562 ttgttttctacttttagcttgtatttataactttcatacactttg-tttggttgcttgatta-tccttgctccatacatcaagt-tgttattggtgtgat 30034466  T
Q  131 tttcatcgaattcacaaca 149  Q
    ||||||||||||| |||||    
T  30034465 tttcatcgaattcgcaaca 30034447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 6610440 - 6610362
Alignment:
Q  69 cactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||    
T  6610440 cactttgttttggttgcttgattatt--ttgctccacacattaagtattttattggtgtgattttcaaagaattcacaaca 6610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 33309209 - 33309329
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  33309209 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 33309307  T
Q  128 gattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||    
T  33309308 gattttcatcgaattcacaaca 33309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 33311478 - 33311598
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  33311478 cgttgttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 33311576  T
Q  128 gattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||    
T  33311577 gattttcatcgaattcacaaca 33311598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 25465513 - 25465444
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  25465513 ttggttgcttgattatt--ttgctccatacatcaagtattttattggtgtgattttcatcgaattcacaaca 25465444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 29754636 - 29754549
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  29754636 ttccatacgctttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 26066048 - 26065958
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacactt 152  Q
    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||    
T  26066048 ttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaacactt 26065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 3394708 - 3394837
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtatttta 120  Q
    ||||||| |||||||||||||||| ||||| ||||||   |||||||||||||| ||||||||||||||||||   || ||||||||||||||  |||||    
T  3394708 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagattttta 3394807  T
Q  121 tttgtgtgattt-tcatcgaattcacaaca 149  Q
    || ||||| ||| ||||||||||| |||||    
T  3394808 ttggtgtgttttctcatcgaattcgcaaca 3394837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 3233717 - 3233564
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttg 99  Q
    ||||||||| ||| |||||||||||   ||||||||||||||||||||||| ||||||   || ||| ||||||| |||||||||| ||||||| ||||     
T  3233717 tgtgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcactta 3233618  T
Q  100 ctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaacactt 152  Q
    ||||||||||||| | | |||||  |||| ||| ||||||||||| ||||||||    
T  3233617 ctccacacatcaaatttgttattgatgtgttttctcatcgaattcgcaacactt 3233564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 26065333 - 26065457
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    ||||||||||||||||||  |||| ||||||||  ||||||| ||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| |||    
T  26065333 gttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaagt-tgttattggtg 26065431  T
Q  127 tgattt---tcatcgaattcacaaca 149  Q
    ||||||   |||||||||||||||||    
T  26065432 tgatttttctcatcgaattcacaaca 26065457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 26068322 - 26068235
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||||||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  26068322 ttccatacgctttgttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 26068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 149
Target Start/End: Original strand, 26085302 - 26085426
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    ||||||||||||||||||  |||| ||||||||  ||||||| ||||| |||||||||||||| |||  ||||||||||||||||||| | ||||| |||    
T  26085302 gttgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaagt-tgttattggtg 26085400  T
Q  127 tgattt---tcatcgaattcacaaca 149  Q
    ||||||   |||||||||||||||||    
T  26085401 tgatttttctcatcgaattcacaaca 26085426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 30728797 - 30728686
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||| |||||||||||||||  ||||  |||||| |  |||||||||||||||||||||| |||| |||  ||||||||||||||||||| | ||||    
T  30728797 tctctcgctgttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatcccttgctccacacatcaagtttgttat 30728698  T
Q  122 ttgtgtgatttt 133  Q
    | ||||||||||    
T  30728697 tggtgtgatttt 30728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 30967554 - 30967673
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||  ||||  |||    |||||| ||||||||||||||| |||||||||  ||||||||||||||||||| | ||||| |||||    
T  30967554 cgttgttttctacttttgacttgtatttaattattccatgcactttgttttggttacttgattatctcttgctccacacatcaagt-tgttattggtgtg 30967652  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||| ||||||| |||||    
T  30967653 attttcaacgaattcgcaaca 30967673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 4816158 - 4816088
Alignment:
Q  62 ttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  4816158 ttccatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 4816088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 18322482 - 18322567
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| ||||||| |||||| ||||||    
T  18322482 catacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatagaattcgcaacac 18322567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 1230173 - 1230090
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||||| | ||||| |||||||||| ||||||||| |||||    
T  1230173 catacactttattttggttgcttgattatctcttgatccacacatcaagt-tgttattggtgtgatttttatcgaattcgcaaca 1230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 22870075 - 22869950
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    |||||||||||||||||||  |||   ||||| |||||||   ||  ||| |||||||||||||||||||| |  || ||| ||||||||||||||||||    
T  22870075 tttctctcgttgttttctatctttttcttgtgtttataaccgtcacccacattgttttggttgcttgattaat--tttctcaacacatcaagtattttat 22869978  T
Q  122 ttgtgtgattttcatcgaattcacaaca 149  Q
    | |||||||||| | |||||||||||||    
T  22869977 tggtgtgatttttaacgaattcacaaca 22869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 25480217 - 25480346
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    ||||||||| |||||||||||||||  ||||| ||||||   || |||||||||| ||||||||||| || |||  ||| ||| ||||||||| || |||    
T  25480217 tttctctcgctgttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaaata-ttt 25480315  T
Q  120 atttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||| |||||| ||||||||||||||||||||    
T  25480316 attggtgtgatttttcatcgaattcacaaca 25480346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 8717268 - 8717195
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||  ||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaaca 8717195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 32280386 - 32280464
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | |||||||||||| |||| ||||||||||||||||    
T  32280386 ttgtattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattttttatcgaattcacaacac 32280464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 13057517 - 13057659
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||||||||   ||||||||||||||| |||||| |||||| |      |||||| | ||||||||||||||||   |||||||||    
T  13057517 tgtgttctctctttcttttctctatctgttttctacttttg-tttgtgattataattgttgcccacttt-tattggttgcttgattatcctttgctccac 13057614  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||| | ||||| |||||| |||||||||||||| |||||    
T  13057615 acatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 19704493 - 19704403
Alignment:
Q  62 ttccatacactttg--ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt-tc-atcgaattcacaaca 149  Q
    ||||||||||||||  ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||| || |||||||||||||||    
T  19704493 ttccatacactttgatttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttctcgatcgaattcacaaca 19704403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 28078118 - 28078064
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  28078118 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 28078064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 16455350 - 16455279
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    ||||||||||||||| |  |||||||||| ||||||||||||||| || ||| |||||||||||||||||||||    
T  16455350 ttggttgcttgattact--ttgctccacatatcaagtattttattggtttgatttttcatcgaattcacaacac 16455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 22490952 - 22491077
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||||||||||||||||||||||||  | || |||||| |   |  ||||| |||||||||||||||||||   | ||||||||||| |||| | ||||    
T  22490952 tttctctcgttgttttctacttttggcctatgtttataattgttacccactt-gttttggttgcttgattatccttagctccacacattaagtttgttat 22491050  T
Q  122 ttgtgtga-ttttcatcgaattcacaa 147  Q
    | |||||| ||||||||||||||||||    
T  22491051 tggtgtgatttttcatcgaattcacaa 22491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 1069691 - 1069603
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatc 110  Q
    ||||||| |||||||||||||| | ||||| |||||| |  |||||||||||||||||| |||||||| |||  ||||||||| |||||    
T  1069691 tctctcgctgttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctccatacatc 1069603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 3918767 - 3918841
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaac 148  Q
    |||||||||||||||||||| |  |||||||||| || |||||||||||| |||||| |||||| ||||||||||||    
T  3918767 ttgttttggttgcttgattaat--ttgctccacaaattaagtattttattggtgtgatttttcaacgaattcacaac 3918841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 15541132 - 15540985
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||| || ||||||||||||||||| ||||| |||||| ||||||||   |   |||| ||||||||| ||||| |||  ||||||||||    
T  15541132 tgtgttctctcttttttctctctcgttgttttctaattttg-tttgtgattataactgttaccaactt-gttttggtttcttgactatcccttgctccac 15541035  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaacactttg 154  Q
    ||||||||| | ||||| || ||| ||||||||||| || ||||| ||||    
T  15541034 acatcaagtttgttattggtttgatttttcatcgaagtcgcaacaatttg 15540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 13040077 - 13040117
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttg 46  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  13040077 tgtgttctctctttcttttctctcgttgttttctacttttg 13040117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 20915281 - 20915214
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    ||||||||||||||||||||||||||||   ||||| ||||||||||||| | ||||| ||||||||||    
T  20915281 catacactttgttttggttgcttgattaccccttgccccacacatcaagt-tattattggtgtgatttt 20915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 14458729 - 14458607
Alignment:
Q  28 tcgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||||| ||||  |||    |||||||||||||| |||||||||| |||||||   || ||||||||||||||  | ||||| |||    
T  14458729 tcgttgttttctacttttggcttgtatttaattgttccatacactttgattttggttgcctgattatccattactccacacatcaag-ctattattggtg 14458631  T
Q  127 tga-ttttcatcgaattcacaaca 149  Q
    ||| |||||||||||||| |||||    
T  14458630 tgatttttcatcgaattcgcaaca 14458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 7294167 - 7294261
Alignment:
Q  55 ttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaacac 150  Q
    |||||||| |||  ||| |||||||| || |||||||| |  || ||||||||||||||||||||||| |||||| |||| | ||||||||||||||    
T  7294167 ttataactgccactcacgttgttttgattccttgattaat--tttctccacacatcaagtattttattggtgtgattttttaacgaattcacaacac 7294261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 12937187 - 12937146
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttg 46  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  12937187 gtgtgttctatctttcttttctctcgttgttttctacttttg 12937146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 25078465 - 25078416
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||| | |||||||||| | |||||||||||||    
T  25078465 ctccacacatcaagtattttactggtgtgatttttaacgaattcacaaca 25078416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 26505384 - 26505244
Alignment:
Q  1 tttcgtgtgttctcgctttctttt-ctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttg 99  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||   ||||| ||| ||||   |  ||| ||||||| |||| |||||||  | |||    
T  26505384 tttcatgtgttctctctttctttttctctcgttgttttctactttt-tcttgtgtttacaactgttacccacgttgttttagttgtttgatta--atttg 26505288  T
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattc 143  Q
     ||||||||| || |||||||||  ||||||||||| |||||||    
T  26505287 ttccacacataaaatattttattgatgtgattttcaacgaattc 26505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 15530129 - 15530003
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||  |||||| |  |||||||||||   ||||| |||  |||||||| ||| ||||||||||||||| | ||||| |||    
T  15530129 gttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtg 15530030  T
Q  127 tga----ttttcatcgaattcacaaca 149  Q
    |||    || |||||||||||||||||    
T  15530029 tgagtttttctcatcgaattcacaaca 15530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 28037630 - 28037576
Alignment:
Q  97 ttgctccacacatcaagta-ttttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    ||||||||||||||||||| ||||||| |||||| |||||| |||||||||||||    
T  28037630 ttgctccacacatcaagtatttttattggtgtgatttttcaacgaattcacaaca 28037576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 3919166 - 3919224
Alignment:
Q  73 ttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||||||||||||||||| |  |||||| ||| || |||||||||||| ||||||||||    
T  3919166 ttgttttggttgcttgattaat--ttgctctacaaattaagtattttattggtgtgatttt 3919224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 12911418 - 12911369
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||| ||||||||| |||| ||||| | |||||||||||||    
T  12911418 ctccacacatcaattattttattggtgtaatttttaacgaattcacaaca 12911369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 13040179 - 13040232
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||||| | ||||| |||||| |||||||||||||| |||||    
T  13040179 ttgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgcaaca 13040232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 22857888 - 22857843
Alignment:
Q  105 cacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||    
T  22857888 cacatcaagtattttattggtgtgatttttcaacgaattcacaaca 22857843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22857950 - 22857887
Alignment:
Q  1 tttcgtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttcca 66  Q
    |||||||||||||| ||||| ||||||||| |||||| ||||||| | ||||| ||||||||||||    
T  22857950 tttcgtgtgttctctctttc-tttctctcgctgttttgtactttt-gcttgtgtttataacttcca 22857887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 30445911 - 30445981
Alignment:
Q  78 ttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||||||||  ||||||||||||| || ||||||||| |||| | |||| | |||||||||||||    
T  30445911 ttggttgcttgattatt--ttgctccacacataaaatattttattggtgttattttttaacgaattcacaaca 30445981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 10584358 - 10584413
Alignment:
Q  96 cttgctccacacatcaagtattttatttgtgtgattt--tcatcgaattcacaaca 149  Q
    ||||||||||||||||||| | ||||| ||||| |||  |||||||||||||||||    
T  10584358 cttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaaca 10584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 17038514 - 17038565
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||  |||||||| ||||||| |||||||||||||| |||||||||||    
T  17038514 ttgctccatgcatcaagt-ttttattggtgtgattttcatcaaattcacaaca 17038565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 20544843 - 20544891
Alignment:
Q  101 tccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||||||||||||  ||||||||| | |||||| ||||||    
T  20544843 tccacacatcaagtattttattgatgtgatttttaacgaattaacaaca 20544891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 52328 - 52458
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||| |||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||    
T  52328 tctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttat 52427  T
Q  122 ttgtgtga-ttttcatcgaattcacaacact 151  Q
    | |||||| |||||||||||||| |||||||    
T  52428 tggtgtgatttttcatcgaattcgcaacact 52458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 149
Target Start/End: Original strand, 50329 - 50457
Alignment:
Q  24 tctctcgttgttttctacttttggtttgtggttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 121  Q
    ||||| |||||||||||||||||| ||||| |||||| |  | |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||    
T  50329 tctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttat 50428  T
Q  122 ttgtgtga-ttttcatcgaattcacaaca 149  Q
    | |||||| |||||||||||||| |||||    
T  50429 tggtgtgatttttcatcgaattcgcaaca 50457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 183602 - 183488
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||| ||||||| ||||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  183602 cgttgttttctacttttggcttgtatttaattgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 183504  T
Q  129 attt-tcatcgaattc 143  Q
    |||| |||||||||||    
T  183503 atttctcatcgaattc 183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 12835 - 12715
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||| ||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||     
T  12835 cgttgttgtctacttttggcttgtatttataactttcatacactttgttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtc 12737  T
Q  129 a-ttttcatcgaattcacaaca 149  Q
    | ||||||||||||||||||||    
T  12736 atttttcatcgaattcacaaca 12715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 41444 - 41325
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  41444 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagt-tgttattggtgtg 41346  T
Q  129 attttcatcgaattcacaaca 149  Q
    |||||||||||||||||||||    
T  41345 attttcatcgaattcacaaca 41325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 3206 - 3322
Alignment:
Q  29 cgttgttttctacttttggt-ttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||| |  ||||  ||||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||| | ||||| ||||    
T  3206 cgttgttttctactttttgacttgtatttataactttcatacactttgttt-ggttgcttgattatcccttgctccacacatcaagt-tgttattggtgt 3303  T
Q  128 gattttcatcgaattcaca 146  Q
    |||||||||||||||||||    
T  3304 gattttcatcgaattcaca 3322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 80155 - 80305
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataactt--ccatacactttg-ttttggttgcttgattattacttg 99  Q
    |||| |||| ||| |||||||||||   ||||||||||||||||| ||||| |||||| ||  |||||||||||| |||| ||||| |||||||||||||    
T  80155 tgtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttg 80254  T
Q  100 ctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaaca 149  Q
    ||||||||||||||| | ||||| ||||| ||| ||||||||||| |||||    
T  80255 ctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaaca 80305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 29497 - 29616
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| || |  |||    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  29497 cgttgttttctacttttggcttttatttaattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagt-tgttattggtgtg 29595  T
Q  129 attttcatcgaattcacaaca 149  Q
    ||||||||||||||| |||||    
T  29596 attttcatcgaattcgcaaca 29616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 85538 - 85667
Alignment:
Q  18 ttcttttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagt 114  Q
    |||||||||||||||||||||||||||||  ||||| ||||||   |||||||||||||| ||||||||| ||||||||  |||||||||||||| |||     
T  85538 ttcttttctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaaga 85637  T
Q  115 attttatttgtgtga-ttttcatcgaattc 143  Q
     | ||||| |||||| ||||||||||||||    
T  85638 ttgttattggtgtgatttttcatcgaattc 85667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 1412 - 1294
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtg 128  Q
    ||||||||||||||||||| ||||  |||    ||||||||||||||||||||||||||||||||   || ||||||||||||||| | ||||| |||||    
T  1412 cgttgttttctacttttggcttgtatttaattgttccatacactttgttttggttgcttgattatctttttctccacacatcaagt-tgttattggtgtg 1314  T
Q  129 a-ttttcatcgaattcacaa 147  Q
    | ||||||||||||||||||    
T  1313 atttttcatcgaattcacaa 1294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 79508 - 79634
Alignment:
Q  30 gttgttttctacttttggtttgtggttataact--tccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtg 126  Q
    |||||||||||||||||| ||||| |||||| |  ||||||||||||| |||||||||| | |||||  ||||||||||||||||||| | ||||| |||    
T  79508 gttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtg 79607  T
Q  127 tga-ttttcatcgaattcacaacactt 152  Q
    ||| ||||||| |||||| ||||||||    
T  79608 tgatttttcattgaattcgcaacactt 79634  T

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Target: scaffold0472 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 6526 - 6646
Alignment:
Q  29 cgttgttttctacttttggtttgtggttataacttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgt 127  Q
    ||||||||||||||||||| ||||  |||| | |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| ||||    
T  6526 cgttgttttctacttttggcttgtatttatta-ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgt 6623  T
Q  128 ga-ttttcatcgaattcacaaca 149  Q
    || ||||||||||||||||||||    
T  6624 gatttttcatcgaattcacaaca 6646  T

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Target: scaffold0133 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 147
Target Start/End: Original strand, 5105 - 5245
Alignment:
Q  6 tgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgctccac 105  Q
    ||||||||| |||||||  |||||| |||||| ||||||||| ||| | ||||||| ||||||||||||  ||| ||||||||||||||||||| |  |     
T  5105 tgtgttctctctttcttc-ctctcgctgtttt-tacttttggcttgcgtttataacgtccatacacttttattttgttgcttgattattacttgtttgat 5202  T
Q  106 acatcaagtattttatttgtgtga-ttttcatcgaattcacaa 147  Q
    ||||||||||||||| | |||||| ||||||| ||||||||||    
T  5203 acatcaagtattttaatggtgtgatttttcattgaattcacaa 5245  T

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Target: scaffold0370 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 1377 - 1310
Alignment:
Q  65 catacactttgttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgatttt 133  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  1377 catacactttgttttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 1310  T

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Target: scaffold0267 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 385 - 475
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtgattt-tcatcgaattcacaacact 151  Q
    |||||||| ||||| ||||||||||||||||||  ||||||||||||||||||| | ||||| ||||||||| ||| |||||||||||||||    
T  385 ttccatacgctttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttctcaacgaattcacaacact 475  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 35901 - 36044
Alignment:
Q  18 ttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgtttt-ggttgcttgattattacttgctccacacatca 111  Q
    |||||||||||||   |||||||| | |||||| ||||| |||||| |  | ||||||||||||||| |||||||||| |||  ||||||||||||||||    
T  35901 ttcttttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatca 36000  T
Q  112 agtattttatttgtgtga-ttttcatcgaattcacaacactttg 154  Q
    ||| | ||||| |||| | |||||||||||||| ||| ||||||    
T  36001 agtttgttattggtgtaatttttcatcgaattcgcaatactttg 36044  T

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Target: scaffold0339 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 4307 - 4439
Alignment:
Q  22 tttctctcgttgttttctacttttggtttgtggttataa--cttccatacactttgttttggttgcttgattattacttgctccacacatcaagtatttt 119  Q
    ||||||||| |||||||||||||||| ||||| ||||||   ||| ||||||||  ||||| ||||||||||||  ||| ||||||||||||||| | ||    
T  4307 tttctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgtt 4406  T
Q  120 atttgtgtgattt-tcatcgaattcacaacact 151  Q
    |||  |||| |||  || |||||||||||||||    
T  4407 attgatgtgttttcacaacgaattcacaacact 4439  T

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Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 11465 - 11315
Alignment:
Q  6 tgtgttctcgctttcttttctctcg---ttgttttctacttttggtttgtggttataact--tccatacactttgttttg--gttgcttgattattactt 98  Q
    ||||||||| |||  ||||||||||   ||||||||||||||||| ||||| |||||| |  |||||||||||| ||||   ||||||| |||||| |||    
T  11465 tgtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattcctt 11366  T
Q  99 gctccacacatcaagtattttatttgtgtg--attttcatcgaattcacaac 148  Q
     ||||||||||||||| | ||||| |||||  ||||||||||||||| ||||    
T  11365 actccacacatcaagt-tgttattggtgtgatattttcatcgaattcgcaac 11315  T

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Target: scaffold0224 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 15814 - 15723
Alignment:
Q  5 gtgtgttctcgctttcttttctctcgttgttttctacttttggtttgtggttataacttccatacactttgttttggttgcttgattattacttgct 101  Q
    ||||||| || |||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||   || ||||  ||||||||||||||||||||    
T  15814 gtgtgttatctctttcttt-ctcccgttgttttctactttt-gtttgtgtttataacttccatac---tttttttttttgcttgattattacttgct 15723  T

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Target: scaffold0140 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 24751 - 24839
Alignment:
Q  62 ttccatacactttg-ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||| ||||| |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  24751 ttccatacgctttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 24839  T

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Target: scaffold0140; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 22491 - 22564
Alignment:
Q  76 ttttggttgcttgattattacttgctccacacatcaagtattttatttgtgtga-ttttcatcgaattcacaaca 149  Q
    |||||||||||| |||||  ||||||||||||||||||| | ||||| |||||| ||||| ||||||||||||||    
T  22491 ttttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcgtcgaattcacaaca 22564  T

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Target: scaffold0256 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 16605 - 16656
Alignment:
Q  97 ttgctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  16605 ttgctccacgcatcaagt-ttttattggtgtgattttcatcgaattcacaaca 16656  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 57320 - 57271
Alignment:
Q  100 ctccacacatcaagtattttatttgtgtgattttcatcgaattcacaaca 149  Q
    ||||||||||||| ||| |||||||||||||||| | | |||||||||||    
T  57320 ctccacacatcaaatatgttatttgtgtgatttttaaccaattcacaaca 57271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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