View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15333_high_10 (Length: 206)
Name: NF15333_high_10
Description: NF15333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15333_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 40646803 - 40646606
Alignment:
| Q |
1 |
tgtttggggtttctgggagtgagttgcgaagagaggttaaggatgttctgcttgagattgatgtatcggttgagagatggaatccggttgaaccggcgta |
100 |
Q |
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| T |
40646803 |
tgtttgggttttctgggagtgagttgcgaagagaggttaaggatgttctgcttgagattgatgtatcggttgagagatggaatccggttgaaccggcgta |
40646704 |
T |
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| Q |
101 |
tgaggttgaagggttgtcggaaaatgatgatgtttttgttttggtggttgcacgtgtgattgtggtacttgcacgtgtgggtttagatgatgatgatg |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
40646703 |
tgaggttgaagggttgtcggaaaatgatgatgtttttgttttggtggttgcacgtgtgattgtggtacttgcacgtgtgggtttaggtgatgatgatg |
40646606 |
T |
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