View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15335_low_2 (Length: 460)

Name: NF15335_low_2
Description: NF15335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15335_low_2
NF15335_low_2
[»] chr1 (41 HSPs)
chr1 (1-317)||(3101854-3102170)
chr1 (9-88)||(26097852-26097931)
chr1 (9-102)||(12871816-12871909)
chr1 (1-86)||(10304765-10304850)
chr1 (9-111)||(9298241-9298342)
chr1 (396-436)||(3102249-3102289)
chr1 (22-94)||(50107754-50107826)
chr1 (9-88)||(47551290-47551369)
chr1 (17-103)||(25689673-25689759)
chr1 (9-75)||(28399189-28399255)
chr1 (131-252)||(23257413-23257533)
chr1 (17-66)||(25032957-25033006)
chr1 (9-94)||(31426991-31427076)
chr1 (9-87)||(7995402-7995486)
chr1 (10-85)||(13152636-13152711)
chr1 (9-88)||(32878903-32878982)
chr1 (31-102)||(37684916-37684987)
chr1 (31-102)||(37700530-37700601)
chr1 (32-110)||(8224392-8224469)
chr1 (46-88)||(42276593-42276635)
chr1 (9-75)||(49772279-49772345)
chr1 (46-102)||(18343850-18343906)
chr1 (130-177)||(2350946-2350993)
chr1 (130-177)||(6212657-6212704)
chr1 (122-177)||(7995312-7995367)
chr1 (130-177)||(15276189-15276236)
chr1 (29-88)||(28082353-28082412)
chr1 (10-65)||(29069711-29069766)
chr1 (41-88)||(40862666-40862713)
chr1 (9-87)||(2486107-2486185)
chr1 (46-88)||(10627237-10627279)
chr1 (41-75)||(34659494-34659528)
chr1 (9-75)||(46930290-46930356)
chr1 (17-58)||(13999169-13999210)
chr1 (46-103)||(29726423-29726480)
chr1 (31-88)||(33177438-33177495)
chr1 (46-102)||(13488363-13488419)
chr1 (46-102)||(14265522-14265578)
chr1 (46-102)||(27534935-27534991)
chr1 (46-102)||(45193455-45193511)
chr1 (46-102)||(46589380-46589436)
[»] chr3 (44 HSPs)
chr3 (24-102)||(40702645-40702723)
chr3 (9-80)||(47733740-47733811)
chr3 (9-88)||(105890-105969)
chr3 (1-111)||(1074721-1074836)
chr3 (9-102)||(19861114-19861213)
chr3 (8-75)||(41598333-41598400)
chr3 (122-177)||(50520099-50520154)
chr3 (1-84)||(3457126-3457215)
chr3 (1-75)||(25135179-25135253)
chr3 (1-87)||(31730831-31730917)
chr3 (46-100)||(49627932-49627986)
chr3 (46-88)||(53402859-53402901)
chr3 (122-175)||(22844368-22844421)
chr3 (122-175)||(30156035-30156088)
chr3 (23-72)||(31550137-31550186)
chr3 (9-85)||(3312639-3312714)
chr3 (23-75)||(20044716-20044768)
chr3 (46-102)||(32080589-32080645)
chr3 (9-102)||(36691634-36691733)
chr3 (46-102)||(48652275-48652331)
chr3 (130-177)||(1165139-1165186)
chr3 (130-177)||(20251981-20252028)
chr3 (130-177)||(33076609-33076656)
chr3 (25-88)||(48212551-48212614)
chr3 (130-177)||(54706475-54706522)
chr3 (46-88)||(14585700-14585742)
chr3 (46-88)||(53155279-53155321)
chr3 (113-177)||(1074637-1074702)
chr3 (31-88)||(4019815-4019872)
chr3 (211-252)||(27831502-27831543)
chr3 (46-87)||(31270564-31270605)
chr3 (46-87)||(31462596-31462637)
chr3 (122-166)||(3457253-3457297)
chr3 (122-166)||(4019914-4019958)
chr3 (46-102)||(11819321-11819377)
chr3 (197-253)||(28929196-28929252)
chr3 (46-102)||(33637641-33637697)
chr3 (122-178)||(35175039-35175095)
chr3 (122-166)||(40365540-40365584)
chr3 (130-178)||(43839259-43839307)
chr3 (211-255)||(45664625-45664669)
chr3 (45-85)||(48401355-48401395)
chr3 (23-71)||(53293281-53293329)
chr3 (31-75)||(53427015-53427059)
[»] chr4 (34 HSPs)
chr4 (9-88)||(5814541-5814620)
chr4 (1-88)||(56236669-56236756)
chr4 (9-87)||(8712725-8712803)
chr4 (9-88)||(2447995-2448080)
chr4 (1-66)||(22121633-22121698)
chr4 (122-253)||(46267997-46268132)
chr4 (17-75)||(50448865-50448923)
chr4 (122-177)||(7060645-7060700)
chr4 (9-96)||(18995481-18995568)
chr4 (13-88)||(41837530-41837605)
chr4 (3-100)||(43244210-43244313)
chr4 (9-75)||(45756819-45756885)
chr4 (10-88)||(55600384-55600462)
chr4 (1-74)||(56062176-56062249)
chr4 (130-177)||(5388837-5388884)
chr4 (9-88)||(6082271-6082350)
chr4 (130-177)||(9662177-9662224)
chr4 (122-177)||(11210048-11210103)
chr4 (10-101)||(13169275-13169366)
chr4 (122-177)||(37869160-37869215)
chr4 (122-177)||(43157093-43157148)
chr4 (9-86)||(53647827-53647910)
chr4 (46-100)||(26674610-26674664)
chr4 (41-102)||(2945364-2945425)
chr4 (46-87)||(30202276-30202317)
chr4 (49-94)||(43278175-43278220)
chr4 (31-80)||(49066904-49066953)
chr4 (132-177)||(52555483-52555528)
chr4 (46-102)||(1657392-1657448)
chr4 (46-102)||(6911918-6911974)
chr4 (122-166)||(20399649-20399693)
chr4 (221-253)||(34668600-34668632)
chr4 (122-166)||(42197884-42197928)
chr4 (31-87)||(44021422-44021478)
[»] chr2 (39 HSPs)
chr2 (9-88)||(34471161-34471240)
chr2 (9-94)||(15920069-15920154)
chr2 (9-75)||(7581947-7582013)
chr2 (9-75)||(20124629-20124695)
chr2 (9-100)||(9689814-9689911)
chr2 (9-85)||(5754483-5754559)
chr2 (17-93)||(27666413-27666489)
chr2 (9-102)||(13878836-13878935)
chr2 (9-102)||(14018961-14019060)
chr2 (17-88)||(17767407-17767478)
chr2 (9-88)||(12704882-12704967)
chr2 (31-86)||(3397821-3397876)
chr2 (130-177)||(6090213-6090260)
chr2 (29-76)||(16379951-16379998)
chr2 (130-177)||(34471299-34471346)
chr2 (130-177)||(43929043-43929090)
chr2 (46-88)||(4739567-4739609)
chr2 (46-100)||(11942606-11942660)
chr2 (46-100)||(31908646-31908700)
chr2 (46-88)||(34416604-34416646)
chr2 (29-87)||(43929141-43929199)
chr2 (46-87)||(7072790-7072831)
chr2 (46-103)||(11550420-11550477)
chr2 (221-254)||(17055965-17055998)
chr2 (221-254)||(17068412-17068445)
chr2 (221-254)||(17074395-17074428)
chr2 (46-75)||(28230951-28230980)
chr2 (210-247)||(29173519-29173556)
chr2 (46-123)||(41797829-41797905)
chr2 (46-75)||(43473982-43474011)
chr2 (46-102)||(4732308-4732364)
chr2 (130-178)||(7640098-7640146)
chr2 (197-253)||(9689639-9689695)
chr2 (122-166)||(11798283-11798327)
chr2 (9-88)||(11798369-11798449)
chr2 (52-88)||(16136322-16136358)
chr2 (58-102)||(31811821-31811865)
chr2 (50-102)||(38384284-38384336)
chr2 (46-102)||(44942524-44942580)
[»] chr5 (25 HSPs)
chr5 (1-111)||(39531231-39531344)
chr5 (9-86)||(39915688-39915765)
chr5 (1-88)||(7771662-7771755)
chr5 (122-177)||(2415718-2415773)
chr5 (8-75)||(12215326-12215393)
chr5 (13-88)||(42396354-42396434)
chr5 (122-188)||(20271030-20271096)
chr5 (48-86)||(28040869-28040907)
chr5 (46-111)||(6635486-6635550)
chr5 (129-177)||(19645779-19645827)
chr5 (129-177)||(42781339-42781387)
chr5 (122-177)||(28618918-28618973)
chr5 (23-85)||(7151020-7151082)
chr5 (46-100)||(23428490-23428544)
chr5 (50-88)||(32347555-32347593)
chr5 (46-99)||(17732216-17732269)
chr5 (31-88)||(34874078-34874135)
chr5 (124-177)||(37425440-37425493)
chr5 (46-102)||(177931-177987)
chr5 (46-102)||(17331566-17331622)
chr5 (23-75)||(17523382-17523434)
chr5 (122-178)||(20145961-20146017)
chr5 (46-102)||(29098027-29098083)
chr5 (129-177)||(35906592-35906640)
chr5 (122-166)||(39179591-39179635)
[»] scaffold0007 (2 HSPs)
scaffold0007 (9-109)||(201878-201977)
scaffold0007 (197-254)||(201730-201787)
[»] chr7 (39 HSPs)
chr7 (10-88)||(14657698-14657776)
chr7 (9-86)||(38277039-38277116)
chr7 (31-99)||(772660-772728)
chr7 (9-88)||(21954665-21954744)
chr7 (122-253)||(27535759-27535894)
chr7 (46-88)||(28664782-28664824)
chr7 (9-102)||(4621200-4621293)
chr7 (17-102)||(9137159-9137244)
chr7 (3-111)||(39707473-39707580)
chr7 (130-177)||(47750058-47750105)
chr7 (38-88)||(5914596-5914646)
chr7 (17-87)||(32587375-32587445)
chr7 (23-68)||(5436076-5436121)
chr7 (9-102)||(29352421-29352514)
chr7 (122-178)||(47156701-47156757)
chr7 (122-177)||(7986208-7986263)
chr7 (130-177)||(21991001-21991048)
chr7 (122-177)||(25854954-25855009)
chr7 (130-177)||(26017401-26017448)
chr7 (130-177)||(30992566-30992613)
chr7 (122-177)||(37375790-37375845)
chr7 (122-177)||(45482386-45482441)
chr7 (9-87)||(6496087-6496165)
chr7 (46-88)||(17473593-17473635)
chr7 (46-88)||(17579579-17579621)
chr7 (46-88)||(21990900-21990942)
chr7 (46-88)||(26161189-26161231)
chr7 (46-100)||(36253168-36253222)
chr7 (29-75)||(45949532-45949578)
chr7 (9-94)||(6646435-6646520)
chr7 (46-111)||(32643206-32643270)
chr7 (122-166)||(18754011-18754055)
chr7 (31-87)||(19895525-19895581)
chr7 (130-174)||(34594268-34594312)
chr7 (41-85)||(36350395-36350439)
chr7 (122-166)||(37399914-37399958)
chr7 (46-102)||(39090320-39090376)
chr7 (46-102)||(41288194-41288250)
chr7 (1-65)||(43256420-43256484)
[»] chr6 (20 HSPs)
chr6 (46-102)||(30813304-30813360)
chr6 (9-177)||(4921637-4921807)
chr6 (122-177)||(548615-548670)
chr6 (22-88)||(13871467-13871533)
chr6 (46-111)||(1106686-1106750)
chr6 (9-102)||(12156331-12156424)
chr6 (9-88)||(23101249-23101334)
chr6 (23-88)||(31395459-31395524)
chr6 (46-102)||(6419685-6419741)
chr6 (46-102)||(12481197-12481253)
chr6 (46-102)||(12654136-12654192)
chr6 (129-177)||(13233851-13233899)
chr6 (122-166)||(20845324-20845368)
chr6 (8-75)||(8978600-8978667)
chr6 (46-88)||(4394008-4394050)
chr6 (46-88)||(23654488-23654530)
chr6 (22-72)||(28943478-28943528)
chr6 (14-71)||(6127508-6127565)
chr6 (122-166)||(8644544-8644588)
chr6 (122-166)||(29920663-29920707)
[»] chr8 (34 HSPs)
chr8 (2-73)||(18204159-18204230)
chr8 (9-88)||(32778812-32778891)
chr8 (10-88)||(10334372-10334450)
chr8 (9-86)||(20993002-20993079)
chr8 (46-102)||(12248537-12248593)
chr8 (129-253)||(41996866-41996989)
chr8 (46-88)||(24791017-24791059)
chr8 (46-100)||(37128325-37128378)
chr8 (1-88)||(10338671-10338764)
chr8 (46-102)||(7579690-7579746)
chr8 (46-102)||(10148183-10148239)
chr8 (9-77)||(19489024-19489092)
chr8 (46-86)||(22787728-22787768)
chr8 (24-75)||(6219964-6220015)
chr8 (130-177)||(10338574-10338621)
chr8 (122-177)||(11162217-11162272)
chr8 (130-177)||(13570510-13570557)
chr8 (122-177)||(23970926-23970981)
chr8 (49-88)||(24210482-24210521)
chr8 (122-177)||(31874396-31874451)
chr8 (122-177)||(36545524-36545579)
chr8 (1-39)||(3204689-3204727)
chr8 (9-55)||(4429256-4429302)
chr8 (20-66)||(14919251-14919297)
chr8 (29-102)||(3925516-3925589)
chr8 (9-74)||(10633050-10633115)
chr8 (46-87)||(15288677-15288718)
chr8 (46-87)||(15469046-15469087)
chr8 (46-87)||(39067539-39067580)
chr8 (122-166)||(10043087-10043131)
chr8 (46-86)||(12329865-12329905)
chr8 (10-102)||(13576035-13576127)
chr8 (122-178)||(18190593-18190649)
chr8 (41-112)||(31147644-31147715)
[»] scaffold0999 (1 HSPs)
scaffold0999 (10-85)||(1900-1975)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-99)||(41473-41563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-100)||(404090-404168)
[»] scaffold0321 (1 HSPs)
scaffold0321 (3-88)||(6971-7056)
[»] scaffold1379 (1 HSPs)
scaffold1379 (9-88)||(930-1009)
[»] scaffold0542 (1 HSPs)
scaffold0542 (17-76)||(3985-4044)
[»] scaffold0024 (1 HSPs)
scaffold0024 (132-177)||(36850-36895)
[»] scaffold1350 (1 HSPs)
scaffold1350 (46-102)||(1812-1868)
[»] scaffold0536 (1 HSPs)
scaffold0536 (46-102)||(3138-3194)
[»] scaffold0155 (1 HSPs)
scaffold0155 (46-102)||(35322-35378)


Alignment Details
Target: chr1 (Bit Score: 289; Significance: 1e-162; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 3101854 - 3102170
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3101854 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgaaaatttcagagac 3101953  T
Q  101 tttgaatataactagacatattactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcattgttgtttgttgatttcatattt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3101954 tttgaatataactagacatattactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcattgttgtttgttgatttcatattt 3102053  T
Q  201 gtatttaattgatgtaatcaatcaatttaaatgaatatatatcatttatttttatnnnnnnnntgtgttttgttaacgcagtataaataacggacattga 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  3102054 gtatttaattgatgtaatcaatcaatttaaatgaatatatatcatttatttttataaaaaaaatgtgttttgttaacgcagtataaataacggacattga 3102153  T
Q  301 gtctctacgtagaaatg 317  Q
    |||||||||||||||||    
T  3102154 gtctctacgtagaaatg 3102170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 26097931 - 26097852
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| |||| |||||||||||| |||||||||||||||||||| | ||||||||||    
T  26097931 gttgaaaaattagctttgagcaagtgcagattccattaatgacttttgcgtcgtcaacattgcagatccggagacatgag 26097852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 12871816 - 12871909
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| |||| ||||||||||||||| |||| || |||||||||||| |||||||| |||||||| |||||||||||| ||| | |||||||    
T  12871816 gttgaaagattagctttgagcaagtgcagattcgatcaatgactttggcatcgtcaacgttgcagatccagagacatgagtattccggagactt 12871909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 10304765 - 10304850
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    |||||| ||||||||||||| ||||||| ||||| | ||||||| ||||||||| || |||||||| |||||||||| ||||||||    
T  10304765 tgattcaagttgaaatattagctttgagaaagtggagattcaatcaatgactttagcatcgtcaacgttgcagattcggagacatg 10304850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 9298342 - 9298241
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaata 108  Q
    ||||||| |||||||||||||||||||| || | || |||||||||||| ||||||||  ||||||| | |||| ||||| ||||| ||||| |||||||    
T  9298342 gttgaaagattaactttgagcaagtgcagatccgatcaatgactttggcatcgtcaacgatgcagatccggagatatgagtatttcggagac-ttgaata 9298244  T
Q  109 taa 111  Q
    |||    
T  9298243 taa 9298241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 3102249 - 3102289
Alignment:
Q  396 cctcatttttccgaaaccctcgtcactcgctcctcgccgcg 436  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3102249 cctcatttttccgaaaccctcgtcactcgctcctcgccgcg 3102289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 50107826 - 50107754
Alignment:
Q  22 ctttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    |||||| |||||||| ||||||| ||||||||| | |||||||||||||||||| |||| ||||||| |||||    
T  50107826 ctttgatcaagtgcaaattcaatcaatgacttttgtgtcgtcaacattgcagatccagaaacatgagtatttc 50107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 47551290 - 47551369
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| || |||| |||||||||| |||||||||| |||||||| | || |||||||    
T  47551290 gttgaaagattagctttgagcaagtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgag 47551369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 25689759 - 25689673
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagacttt 103  Q
    |||| ||||| | ||| ||||||||||| |||||||| |||||||||||||||||||||    ||||||||| |||||| |||||||    
T  25689759 attagctttgggaaagcgcatattcaatcaatgacttcggcgtcgtcaacattgcagatctgaagacatgagtatttcaaagacttt 25689673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 28399255 - 28399189
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||||||| ||||||||||||||| || |||| ||||||||| || | |||||||||||||||    
T  28399255 gttgaaatattagctttgagcaagtgcagatccaatcaatgacttttgcattgtcaacattgcagat 28399189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 23257413 - 23257533
Alignment:
Q  131 gttttatgctattcgcatggatgttgtgagtctgttaacatattcattgttgtttgttgatttcatatttgtatttaattgatgtaatcaatcaatttaa 230  Q
    ||||| |||||||  ||||||||||||||| ||||||||||||||||  || ||||||  |  |  ||||| |||  || |||||| || ||||||||||    
T  23257413 gttttgtgctattaacatggatgttgtgagcctgttaacatattcatcctt-tttgtttttagcgaatttgcattatatcgatgtactctatcaatttaa 23257511  T
Q  231 atgaatatatatcatttatttt 252  Q
    ||||||| ||||||||||||||    
T  23257512 atgaataaatatcatttatttt 23257533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 25033006 - 25032957
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaac 66  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| |||||    
T  25033006 attaactttgagcaagtgcaaattcaatcaatgactttggcgtcatcaac 25032957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 31427076 - 31426991
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    ||||||| ||||||||||| ||||||||  |||||| ||| ||||| ||||||||||| ||| ||||||| | ||||||| |||||    
T  31427076 gttgaaagattaactttgatcaagtgcaacttcaatcaataacttttgcgtcgtcaacgttggagattcaaaaacatgagtatttc 31426991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 7995486 - 7995402
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||| |||| ||||||||||||||||||    ||||| |  |||||||||||||||||||| |||||||||| |||||||||    
T  7995486 gttgaaagattagctttgagcaagtgcatatccgatcaatgacaatgactttggcgtcgtcaacgttgcagattctgagacatga 7995402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 13152636 - 13152711
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||||| |||||||||||||||||||| || | || ||||||||||||||| ||||| || |||||  ||||||||    
T  13152636 ttgaaagattaactttgagcaagtgcagatccgatcaatgactttggcgtcatcaacgttacagatcaagagacat 13152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 32878903 - 32878982
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||||| ||||||||| ||| |||| | ||||||||||    
T  32878903 gttgaaagattagctttgagcaagtgcagatccgatcaatgactttggtgtcgtcaacgttgtagatccggagacatgag 32878982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 37684987 - 37684916
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||| ||| ||||||||||||||| ||||||||| |||||||| | |||||| ||| |||| ||||||||    
T  37684987 agtgcagattaaattaatgactttggagtcgtcaacgttgcagatccggagacacgagcattttagagactt 37684916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 37700530 - 37700601
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||| ||| ||||||||||||||| ||||||||| |||||||| | |||||| ||| |||| ||||||||    
T  37700530 agtgcagattaaattaatgactttggagtcgtcaacgttgcagatccggagacacgagcattttagagactt 37700601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 8224392 - 8224469
Alignment:
Q  32 gtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaatata 110  Q
    ||||||||  |||||||||||||||||||||||||  |||||||  |||| |||||| ||||| |||| ||||||||||    
T  8224392 gtgcatatctaattaatgactttggcgtcgtcaacgatgcagatctagaggcatgagtatttcggaga-tttgaatata 8224469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 42276593 - 42276635
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  42276593 aatgactttggcgtcgtcaacgttgcagattcggagacatgag 42276635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 49772279 - 49772345
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||||||| |||||| ||| |||| |||||| |||||||||| ||||||||||  ||||||||    
T  49772279 gttgaaatattagctttgatcaaatgcagattcaactaatgacttttgcgtcgtcaatgttgcagat 49772345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 18343850 - 18343906
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| | |||||||    
T  18343850 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagactt 18343906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 2350946 - 2350993
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  2350946 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 2350993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 6212704 - 6212657
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  6212704 cgttttatgctattaacatggatgttgtgagcctgttcacatattcat 6212657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 7995367 - 7995312
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||| ||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  7995367 tactttatcattttatgctattaacatggatgttgtgagtttgttcacagattcat 7995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 15276236 - 15276189
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  15276236 cgttttatgctattaacatggatgttgtgagtctgttcacagattcat 15276189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 28082353 - 28082412
Alignment:
Q  29 caagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||||||| ||||||||| | || |||||| ||||||||||| | |||||||    
T  28082353 caagtgcatattcaatcaatgacttttgtgttgtcaacgttgcagattcaaatacatgag 28082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 29069766 - 29069711
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaa 65  Q
    |||||| ||||| ||||| |||||||||||||||| |||||||||| |||| ||||    
T  29069766 ttgaaagattaattttgatcaagtgcatattcaatcaatgactttgacgtcttcaa 29069711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 40862713 - 40862666
Alignment:
Q  41 caattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||| ||||| ||||||||||||||| |||||||| ||||||||||||    
T  40862713 caatcaatgattttggcgtcgtcaacgttgcagatccagagacatgag 40862666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 2486107 - 2486185
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||||  ||| ||||||  ||||||| |||||||||||||||||  |||| ||||| |||||||| | |||||||||    
T  2486107 gttgaaaggttagctttgaataagtgcagattcaattaatgacttttacgtcatcaacgttgcagatccggagacatga 2486185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 10627237 - 10627279
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
T  10627237 aatgactttggcgtcttcaacgttgcagattcggagacatgag 10627279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 34659528 - 34659494
Alignment:
Q  41 caattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||| ||||||||||||||||||||||||||||||    
T  34659528 caatcaatgactttggcgtcgtcaacattgcagat 34659494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 46930290 - 46930356
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||| |||||||| || ||||| || ||||||||||| |||||| |||||| ||| ||||||||    
T  46930290 gttgaaagattaacttcgaacaagtacaaattcaattaataactttgacgtcgttaacgttgcagat 46930356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 13999169 - 13999210
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcg 58  Q
    ||||||||||||||| |||| ||||||| |||||||||||||    
T  13999169 attaactttgagcaaatgcagattcaatcaatgactttggcg 13999210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 29726480 - 29726423
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagacttt 103  Q
    ||||||||||||||||||||| |||||||  |  ||||||||| ||| ||||||||||    
T  29726480 aatgactttggcgtcgtcaacgttgcagaaccgaagacatgagtattccagagacttt 29726423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 33177495 - 33177438
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| || |||| ||||||||||| ||||||||||||||| || | ||||||||||    
T  33177495 agtgcagatccaatcaatgactttggtgtcgtcaacattgcaaatccggagacatgag 33177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 13488419 - 13488363
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||| |   |||||||||| ||| |||||||||    
T  13488419 aatgactttggcgtcgtcaacgttgcaggtctggagacatgaggattccagagactt 13488363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 14265522 - 14265578
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||||||||| |||||| |||||||| | |||||||||| ||| | |||||||    
T  14265522 aatgactttggcgttgtcaacgttgcagatccggagacatgagtattccggagactt 14265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 27534935 - 27534991
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||| ||||||||||| |||||||| | |||||||||| ||| | |||||||    
T  27534935 aatgactttagcgtcgtcaacgttgcagatccggagacatgaggattccggagactt 27534991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 45193511 - 45193455
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||| ||||||||||||||| |||||||| | |||||||||| ||||  |||||||    
T  45193511 aatgattttggcgtcgtcaacgttgcagatccggagacatgagtattttggagactt 45193455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 46589380 - 46589436
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||| ||||| |||||||| | || ||||||| |||||||||||||    
T  46589380 aatgactttggagtcctcaacgttgcagatccggacacatgagtatttcagagactt 46589436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 40702645 - 40702723
Alignment:
Q  24 ttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||||||||||||| || ||||||||||||||||||||  |||||||| | |||||||||| |||||||||||||    
T  40702645 ttgagcaagtgcatattctatcaatgactttggcgtcgtcaatgttgcagatcctgagacatgagtatttcagagactt 40702723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 47733811 - 47733740
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcaga 80  Q
    ||||||||||||  ||||||||| |||||||||||| ||||||||||||||||||||  |||||||| ||||    
T  47733811 gttgaaatattagttttgagcaaatgcatattcaatcaatgactttggcgtcgtcaaagttgcagatccaga 47733740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 105969 - 105890
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||| | ||||||||| |||||||||| ||||||||||    
T  105969 gttgaaagattagctttgagcaagtgcaaatccgatcaatgacttttgtgtcgtcaacgttgcagattcggagacatgag 105890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1074836 - 1074721
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    |||||| |||||||| |||| ||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | |||||||||| ||| |    
T  1074836 tgattcaagttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggagacatgagtattcc 1074737  T
Q  95 agagactttgaatataa 111  Q
     ||||| ||||||||||    
T  1074736 ggagac-ttgaatataa 1074721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 19861213 - 19861114
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaat------taatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||||||||||||||| ||       |||||||||| | |||||||| |||||||| | |||||||||| |||  ||||||||    
T  19861213 gttgaaatattaactttgagcaagtgcatattcgatcaatgacaatgactttgacatcgtcaacgttgcagatccggagacatgagtattctagagactt 19861114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 41598400 - 41598333
Alignment:
Q  8 agttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||| |||||||||||| || || |||||||||||||||||||||  | |||||| ||||||||    
T  41598400 agttgaaagattaactttgagaaaatgtatattcaattaatgactttggttttgtcaacgttgcagat 41598333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 50520099 - 50520154
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  50520099 tactttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcat 50520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3457126 - 3457215
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgac------tttggcgtcgtcaacattgcagattcagagaca 84  Q
    |||||| |||||||| |||| ||||||||||||||| || | || ||||||      |||||||||||||||||||||||| ||||||||    
T  3457126 tgattcaagttgaaagattagctttgagcaagtgcaaatccgatcaatgacaatgattttggcgtcgtcaacattgcagatccagagaca 3457215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25135253 - 25135179
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||| |||||||||||||  |||||||||||||| | ||||| ||||| |||| | |||||||| ||||||||    
T  25135253 tgattcaagttgaaatattagatttgagcaagtgcaaaatcaatcaatgattttgacatcgtcaacgttgcagat 25135179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31730831 - 31730917
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||| |||||||| ||||||||||| |||||||| || | || ||| ||||||||||| ||||  ||||||||  ||||||||||    
T  31730831 tgattcaagttgaaagattaactttgaacaagtgcaaatccgatcaataactttggcgtcatcaatgttgcagatctagagacatga 31730917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 49627986 - 49627932
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| |||||||    
T  49627986 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccagagac 49627932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 53402859 - 53402901
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  53402859 aatgactttggcgtcgtcaacgttgcagatccagagacatgag 53402901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 22844368 - 22844421
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattc 175  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||||||||    
T  22844368 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacatattc 22844421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 30156088 - 30156035
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattc 175  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||||||||    
T  30156088 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacatattc 30156035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 31550137 - 31550186
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgca 72  Q
    ||||| |||||||||||||||| |||||||||| |||||||||| |||||    
T  31550137 tttgaacaagtgcatattcaatcaatgactttgtcgtcgtcaactttgca 31550186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3312639 - 3312714
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||||||||||| ||||||||||||| | || | |||||||||||| || |||||||| ||| |||| |||||||||    
T  3312639 gttgaaatattagctttgagcaagtgtagatcctattaatgacttt-gcatcgtcaacgttgtagatccagagacat 3312714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 20044768 - 20044716
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||||||||||||||||| ||| | |||| |||||||||| ||||||||    
T  20044768 tttgagcaagtgcatattcaatcaatcattttgacgtcgtcaacgttgcagat 20044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 32080645 - 32080589
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||| ||||| |||||||| | |||||||||| ||||| |||||||    
T  32080645 aatgactttggcgtcatcaacgttgcagatccggagacatgaggatttcggagactt 32080589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 36691733 - 36691634
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgac------tttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| |||||||||| |||||||||||||| || ||||||      ||||||||||||||| ||||||||   |||||||||| ||| | |||||||    
T  36691733 gttgaaagattaactttgcgcaagtgcatattcgatcaatgacaatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccggagactt 36691634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 48652331 - 48652275
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| | |||||||    
T  48652331 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagactt 48652275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 1165186 - 1165139
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||||||    
T  1165186 cgttttatgctattaacatggatgatgtgagtctgttcacatattcat 1165139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 20251981 - 20252028
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||| |||||  ||||||||||||||||||||| ||||||||||    
T  20251981 cgttttatactattaacatggatgttgtgagtctgttcacatattcat 20252028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 33076609 - 33076656
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  33076609 cgttttatgctattaacatggatattgtgagtctgttcacatattcat 33076656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 48212551 - 48212614
Alignment:
Q  25 tgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||| || |||| |||||||||||||| ||||| ||||||||| |  |||||||||    
T  48212551 tgagcaagtgcagatccaatcaatgactttggcgttgtcaatattgcagatccgaagacatgag 48212614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 54706522 - 54706475
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  54706522 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 54706475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 14585700 - 14585742
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||||||||||||   ||||||||||    
T  14585700 aatgactttggcgtcgtcaacattgcagatctggagacatgag 14585742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 53155321 - 53155279
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  53155321 aatgactttggcgtcgtcaactttgcagatccggagacatgag 53155279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 1074702 - 1074637
Alignment:
Q  113 tagacatatt-actttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||| |||||  ||||||||||||||  |||||||| ||||||| |||| ||||||||||    
T  1074702 tagacatatttactttgccgttttatgctattaacatggatgatgtgagtttgttcacatattcat 1074637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 4019815 - 4019872
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| || |||| ||||||||||||||||||||| |||||||| | ||| ||||||    
T  4019815 agtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgag 4019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 27831502 - 27831543
Alignment:
Q  211 gatgtaatcaatcaatttaaatgaatatatatcatttatttt 252  Q
    |||||| || ||||||||||||||||| ||||||||||||||    
T  27831502 gatgtactctatcaatttaaatgaataaatatcatttatttt 27831543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 31270564 - 31270605
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||||||||||||||||| |||||||| | |||||||||    
T  31270564 aatgactttggcgtcgtcaacgttgcagatccggagacatga 31270605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 31462637 - 31462596
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||||||||||||||||||  ||||||| |||||||||||    
T  31462637 aatgactttggcgtcgtcaacggtgcagatccagagacatga 31462596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 3457253 - 3457297
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  3457253 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 3457297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 4019914 - 4019958
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  4019914 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 4019958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 11819321 - 11819377
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||| | |||||||    
T  11819321 aatgactttggcgtcgtcaacgttgcagatccgaagacatgaggattccggagactt 11819377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 28929252 - 28929196
Alignment:
Q  197 atttgtatttaattgatgtaatcaatcaatttaaatgaatatatatcatttattttt 253  Q
    |||||||||  || ||||| ||| ||||||||||||||| | |||||||||||||||    
T  28929252 atttgtattatatcgatgtgatctatcaatttaaatgaacaaatatcatttattttt 28929196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 33637641 - 33637697
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||| | |||||||    
T  33637641 aatgactttggcgtcgtcaacgttgcagatccgtagacatgaggattccggagactt 33637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 35175039 - 35175095
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    |||||| |||||||||||||||  |||||||| ||||||| |||| ||| |||||||    
T  35175039 tactttgtcgttttatgctattaacatggatgatgtgagtttgttcacaaattcatt 35175095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 40365540 - 40365584
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  40365540 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 40365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 43839307 - 43839259
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    ||||||||| ||||  ||||||||||||||||||||| ||| |||||||    
T  43839307 cgttttatgatattaacatggatgttgtgagtctgttcacagattcatt 43839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 45664625 - 45664669
Alignment:
Q  211 gatgtaatcaatcaatttaaatgaatatatatcatttatttttat 255  Q
    |||||| || ||||||||||||||||  |||||||||||||||||    
T  45664625 gatgtactctatcaatttaaatgaatgaatatcatttatttttat 45664669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 48401355 - 48401395
Alignment:
Q  45 taatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||||||||||||||||||||| |||||||| | |||||||    
T  48401355 taatgactttggcgtcgtcaacgttgcagatccggagacat 48401395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 53293281 - 53293329
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgc 71  Q
    ||||| |||||||||||||||| ||||| |||| |||||||||| ||||    
T  53293281 tttgatcaagtgcatattcaatcaatgattttgacgtcgtcaacgttgc 53293329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 53427015 - 53427059
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||| || |||| ||||||||||||||||||||| ||||||||    
T  53427015 agtgcagatccaatcaatgactttggcgtcgtcaacgttgcagat 53427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 5814541 - 5814620
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| |||| || ||||||||||||||| ||||| |||||||| ||||||||||||    
T  5814541 gttgaaagattagctttgagcaagtgcagattcgatcaatgactttggcgtcatcaacgttgcagatccagagacatgag 5814620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 56236756 - 56236669
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| |||||||| |||||||||||||||| ||| || | || ||||||||||||||||||||| |||||||| | ||||||||||    
T  56236756 tgattcaagttgaaagattaactttgagcaagcgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggagacatgag 56236669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 8712725 - 8712803
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||||||||||||||| |||||||| |||||||||||    
T  8712725 gttgaaagattagctttgagcaagtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccagagacatga 8712803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 2447995 - 2448080
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatg------actttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||||||||||||||||||| ||||||| ||||      ||||||||||||||||||||||||||  |||||||||||    
T  2447995 gttgaaagattaactttgagcaagtgcagattcaatcaatgagaatgactttggcgtcgtcaacattgcagatctagagacatgag 2448080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 22121633 - 22121698
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaac 66  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||| |||| ||||||    
T  22121633 tgattcaagttgaaatattagctttgagcaagtgcatatttaatcaatgacttttgcgttgtcaac 22121698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 46267997 - 46268132
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattca---ttgttg--tttgttgatttcatatttgtatttaattgatgta 216  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| |||||||||   ||||||  ||||  || ||  ||||||||||  || ||||||    
T  46267997 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt-acatattcatccttgttgtttttgacgaatttgtatttgtattgtatcgatgta 46268095  T
Q  217 atcaatcaatttaaatgaatatatatcatttattttt 253  Q
     || ||||||||||||||||| ||||| |||||||||    
T  46268096 ctctatcaatttaaatgaataaatatcgtttattttt 46268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 50448923 - 50448865
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||||||| |||||||||||||||||||||||||| ||| | ||||| ||||||||    
T  50448923 attaactttgatcaagtgcatattcaattaatgacttttgcggcttcaactttgcagat 50448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 7060645 - 7060700
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||||||||||  |||||||||||||||| |||| |||| |||||    
T  7060645 tactttatcgttttatgctattaacatggatgttgtgagtttgttcacattttcat 7060700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 18995481 - 18995568
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcag 96  Q
    ||||||| ||||  ||||| ||||| || ||||||| ||||||||| ||||||||||| |||||||| |||| ||||||  |||||||    
T  18995481 gttgaaagattagttttgatcaagtacagattcaatcaatgacttttgcgtcgtcaacgttgcagatccagaaacatgaatatttcag 18995568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 41837530 - 41837605
Alignment:
Q  13 aaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||| ||| |||| |||||||| ||||||||| ||||| ||||||||||||||| ||| ||||  |||||||||||    
T  41837530 aaatgttagcttttagcaagtggatattcaatcaatgattttggcgtcgtcaacgttgtagatctagagacatgag 41837605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 43244313 - 43244210
Alignment:
Q  3 attcgagttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgagaatttcag 96  Q
    |||| |||||||| |||| ||||||||||||||||||    ||||| |  ||||||||||| |||||||| |||||||| | |||||||||| ||||| |    
T  43244313 attcaagttgaaagattagctttgagcaagtgcatatccgatcaatgacaatgactttggcatcgtcaacgttgcagatccggagacatgagtatttcgg 43244214  T
Q  97 agac 100  Q
    ||||    
T  43244213 agac 43244210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 45756819 - 45756885
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||||||||  ||||||||| | || ||||||| |||||||||||  |||||||||||||||||    
T  45756819 gttgaaatattagttttgagcaaattcagattcaatcaatgactttggtatcgtcaacattgcagat 45756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 55600462 - 55600384
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| |||| ||||||||||| ||| || |||| ||||| ||| ||||||||||| |||||||| | ||||||||||    
T  55600462 ttgaaagattagctttgagcaagcgcagatccaatcaatgattttagcgtcgtcaacgttgcagatccggagacatgag 55600384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 56062176 - 56062249
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcaga 74  Q
    |||||| |||||| |||||| |||||||||||| || ||||||| ||||  |||| |||||||||| |||||||    
T  56062176 tgattcaagttgacatattatctttgagcaagtacagattcaatcaatgtatttgacgtcgtcaacgttgcaga 56062249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 5388837 - 5388884
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||| ||||||||||||||||| |||| ||| ||||||    
T  5388837 cgttttatgctattagcatggatgttgtgagtttgttcacagattcat 5388884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 6082350 - 6082271
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| ||||  | ||||| |||||| |||||||| |||||||| | || |||||||    
T  6082350 gttgaaagattagctttgagcaagtgcagattcggtcaatgattttggcatcgtcaacgttgcagatccggaaacatgag 6082271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 9662177 - 9662224
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||||||    
T  9662177 cgttttatgctattaacatggatgatgtgagtctgttcacatattcat 9662224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 11210103 - 11210048
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  11210103 tactttgtcgttttatgctattatcatggatgttgtgagtttgttcacagattcat 11210048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 13169366 - 13169275
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagact 101  Q
    |||||| ||||  ||||| |||||||| ||||||| || |||| |||| || ||||| ||||||||||||| ||||||  ||| ||||||||    
T  13169366 ttgaaagattagttttgatcaagtgcaaattcaatcaacgactgtggcatcatcaacgttgcagattcagaaacatgaatattccagagact 13169275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 37869215 - 37869160
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||| ||||  ||||||||||||||| ||||| ||||||||||    
T  37869215 tactttgtcgttttatgttattaacatggatgttgtgagcctgttcacatattcat 37869160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 43157093 - 43157148
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  43157093 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcat 43157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 53647827 - 53647910
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    ||||||| |||||||||||||||||||| ||    ||||| |  ||||||||||||||| ||||||||||||| | ||||||||    
T  53647827 gttgaaaaattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgccaacattgcagatccggagacatg 53647910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 26674610 - 26674664
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||||| |||||    
T  26674610 aatgactttggcgtcgtcaacgttgcagatccgaagacatgagtatttcggagac 26674664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Original strand, 2945364 - 2945425
Alignment:
Q  41 caattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||| ||||||||||||||||| |||||||||||| | |||||||  | ||||| |||||||    
T  2945364 caatcaatgactttggcgtcgttaacattgcagatccggagacataggtatttcggagactt 2945425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 30202276 - 30202317
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||||||||||||||||| |||||||| | |||||||||    
T  30202276 aatgactttggcgtcgtcaacgttgcagatccggagacatga 30202317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 43278175 - 43278220
Alignment:
Q  49 gactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    |||||||||||||||||| |||||||| |||||||| ||| |||||    
T  43278175 gactttggcgtcgtcaacgttgcagatccagagacacgagtatttc 43278220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 49066904 - 49066953
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcaga 80  Q
    |||||||||| ||| ||||||||||  |||||| ||||||||||||||||    
T  49066904 agtgcatatttaatcaatgactttgatgtcgtcgacattgcagattcaga 49066953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 52555528 - 52555483
Alignment:
Q  132 ttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  52555528 ttttatgctattaacatggatgttgtgagtctgttcacagattcat 52555483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 1657448 - 1657392
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||||||||| |||||||| | |||||||| | ||| |||||||||    
T  1657448 aatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagactt 1657392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 6911918 - 6911974
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||  ||| |||| | |||||||||| ||| |||||||||    
T  6911918 aatgactttggcgtcgtcaatgttgtagatccggagacatgaggattccagagactt 6911974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 20399693 - 20399649
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  20399693 tactttgtcgttttatgctattaccatggatgttgtgagtttgtt 20399649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 34668600 - 34668632
Alignment:
Q  221 atcaatttaaatgaatatatatcatttattttt 253  Q
    ||||||||||||||||| |||||||||||||||    
T  34668600 atcaatttaaatgaataaatatcatttattttt 34668632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 42197884 - 42197928
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  42197884 tactttgtcgttttatgctattgacatggatgttgtgagtttgtt 42197928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 44021478 - 44021422
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||| || ||||||||||||||| ||||||| || |||||||| | |||||||||    
T  44021478 agtgcagatccaattaatgactttgacgtcgtccacgttgcagatccggagacatga 44021422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 34471161 - 34471240
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||||||||||||||||||| || |||| |||||||||||||| |||||| ||||||||  |||||||||||    
T  34471161 gttgaaagattaactttgagcaagtgcagatccaatcaatgactttggcgttgtcaacgttgcagatctagagacatgag 34471240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 15920069 - 15920154
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    |||||||||||| ||||| ||||||||| || | || ||||||||||||||||||||| |||||||| | || ||||||| |||||    
T  15920069 gttgaaatattagctttgtgcaagtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttc 15920154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 7582013 - 7581947
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||||||| ||||||||||||||| ||||||| || ||||||| |||||||||| ||| ||||    
T  7582013 gttgaaatattatctttgagcaagtgcaaattcaatcaacgactttgacgtcgtcaacgttgtagat 7581947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 20124695 - 20124629
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||| |||| ||||||||||||||| |||| || ||||||||||||||||||||| || |||||    
T  20124695 gttgaaagattagctttgagcaagtgcaaattcgatcaatgactttggcgtcgtcaacgtttcagat 20124629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 9689911 - 9689814
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||| |||||||||||||||||||||||    ||||| |  |||||||||||||||||| |||||||||| | ||||||| || ||| |||||||    
T  9689911 gttgaaagattaactttgagcaagtgcatatccgatcaatgacaatgactttggcgtcgtcagcattgcagatccggagacataagtattccagagac 9689814  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 5754483 - 5754559
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||||| ||||||||| |||||||| | |||||||    
T  5754483 gttgaaagattagctttgagcaagtgcagatccgatcaatgactttggtgtcgtcaacgttgcagatccggagacat 5754559  T

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Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 27666413 - 27666489
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaattt 93  Q
    ||||| |||||  ||||||||||||||| ||||||||| ||||| |||||||| |||||||| | ||||||| ||||    
T  27666413 attaattttgatgaagtgcatattcaatcaatgacttttgcgtcatcaacattacagattcaaaaacatgagtattt 27666489  T

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Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 13878935 - 13878836
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| |||||||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | | |||||||| | |||||||||||    
T  13878935 gttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggggacatgagtacttcagagactt 13878836  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 14019060 - 14018961
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| |||||||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | | |||||||| | |||||||||||    
T  14019060 gttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggggacatgagtacttcagagactt 14018961  T

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Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 17767478 - 17767407
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||||||||||| || | || ||||||||  ||||||||||| |||||||| | ||||||||||    
T  17767478 attaactttgagcaagtgcagatccgatcaatgacttctgcgtcgtcaacgttgcagatccggagacatgag 17767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 12704882 - 12704967
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||||||    ||||| |  ||||||||||||||||||||  ||||||||| ||||||||||    
T  12704882 gttgaaagattagctttgagcaagtgcatatcagatcaatcacaatgactttggcgtcgtcaacgctgcagattcggagacatgag 12704967  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 3397876 - 3397821
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    |||||| ||||||  ||||||||||||||| |||||||||||||| | ||||||||    
T  3397876 agtgcagattcaaccaatgactttggcgtcatcaacattgcagatccggagacatg 3397821  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 6090213 - 6090260
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||| ||||||||||||||| |||||| ||| ||||||    
T  6090213 cgttttatgctattagcatggatgttgtgaatctgttcacaaattcat 6090260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 16379998 - 16379951
Alignment:
Q  29 caagtgcatattcaattaatgactttggcgtcgtcaacattgcagatt 76  Q
    |||||||| |||||||||||||||||| |||||| || ||||||||||    
T  16379998 caagtgcagattcaattaatgactttgacgtcgttaatattgcagatt 16379951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 34471299 - 34471346
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  34471299 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 34471346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 43929090 - 43929043
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  43929090 cgttttatgctattaacatggatgttgtgagtctgttcacaaattcat 43929043  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 4739567 - 4739609
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  4739567 aatgactttggcgtcgtcaacgttgcagatccggagacatgag 4739609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 11942606 - 11942660
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| ||||||||   |||||||||| ||| |||||||    
T  11942606 aatgactttggcgtcgtcaacgttgcagatctggagacatgagtattccagagac 11942660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 31908700 - 31908646
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| |||||||| | ||||||| || ||| |||||||    
T  31908700 aatgactttggcgtcgtcaacgttgcagatccggagacataagtattccagagac 31908646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 34416646 - 34416604
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||| ||||||||||||||||||| | ||||||||||    
T  34416646 aatgactttgacgtcgtcaacattgcagatccggagacatgag 34416604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 43929199 - 43929141
Alignment:
Q  29 caagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||||| ||||||| ||||||||||||||| || || |||||||| | |||||||||    
T  43929199 caagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatga 43929141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 7072831 - 7072790
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||||||||||||||||| |||||||| | |||||||||    
T  7072831 aatgactttggcgtcgtcaacgttgcagatccggagacatga 7072790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 11550477 - 11550420
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagacttt 103  Q
    ||||||||||||||||||||| |||||||| |  ||||||| | ||| ||||||||||    
T  11550477 aatgactttggcgtcgtcaacgttgcagatccgaagacatgggtattacagagacttt 11550420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17055998 - 17055965
Alignment:
Q  221 atcaatttaaatgaatatatatcatttattttta 254  Q
    ||||||||||||||||| ||||||||||||||||    
T  17055998 atcaatttaaatgaataaatatcatttattttta 17055965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17068445 - 17068412
Alignment:
Q  221 atcaatttaaatgaatatatatcatttattttta 254  Q
    ||||||||||||||||| ||||||||||||||||    
T  17068445 atcaatttaaatgaataaatatcatttattttta 17068412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 17074428 - 17074395
Alignment:
Q  221 atcaatttaaatgaatatatatcatttattttta 254  Q
    ||||||||||||||||| ||||||||||||||||    
T  17074428 atcaatttaaatgaataaatatcatttattttta 17074395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 28230980 - 28230951
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||||||||||||||||||||||||||    
T  28230980 aatgactttggcgtcgtcaacattgcagat 28230951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 29173556 - 29173519
Alignment:
Q  210 tgatgtaatcaatcaatttaaatgaatatatatcattt 247  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  29173556 tgatgtaatcaatcaatttgaatgaataaatatcattt 29173519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 41797829 - 41797905
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaatataactagacatatta 123  Q
    |||||||||||| |||||||| |||||||| |  ||||||||| ||| ||||||| |||||||||  ||| |||||||    
T  41797829 aatgactttggcatcgtcaacgttgcagatccgaagacatgagtattccagagac-ttgaatatatatagtcatatta 41797905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 43474011 - 43473982
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||||||||||||||||||||||||||    
T  43474011 aatgactttggcgtcgtcaacattgcagat 43473982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 4732308 - 4732364
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||| ||||||||||| |||||||| | |||||||||| ||| | |||||||    
T  4732308 aatgactttagcgtcgtcaacgttgcagatccggagacatgagtattccggagactt 4732364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 7640146 - 7640098
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    ||||||||||||||  ||||||||||||||| ||||| ||| |||||||    
T  7640146 cgttttatgctattaacatggatgttgtgagcctgttcacagattcatt 7640098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 9689695 - 9689639
Alignment:
Q  197 atttgtatttaattgatgtaatcaatcaatttaaatgaatatatatcatttattttt 253  Q
    |||||||||  || |||||| || |||||||||||||||| |||||| |||||||||    
T  9689695 atttgtattatatcgatgtactctatcaatttaaatgaatgtatatcgtttattttt 9689639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 11798327 - 11798283
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  11798327 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 11798283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 11798449 - 11798369
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcaga-ttcagagacatgag 88  Q
    ||||||| |||| ||||||||| ||| | || | || ||||||||| ||||||||||| ||||||| ||| ||||||||||    
T  11798449 gttgaaagattagctttgagcaggtgtagatccgatcaatgacttttgcgtcgtcaacgttgcagatttcggagacatgag 11798369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 16136322 - 16136358
Alignment:
Q  52 tttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  16136322 tttggcgtcgtcaacgttgcagattcggagacatgag 16136358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 31811821 - 31811865
Alignment:
Q  58 gtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||| ||| ||||||||||||||||||||| ||| |||||||||    
T  31811821 gtcgtaaacgttgcagattcagagacatgagtattccagagactt 31811865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 38384336 - 38384284
Alignment:
Q  50 actttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| |||||||||||||| | |||||||||| ||| | |||||||    
T  38384336 actttggcgtcatcaacattgcagatccggagacatgaggattccggagactt 38384284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 44942524 - 44942580
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||| | |||||||    
T  44942524 aatgactttggcgtcgtcaacgttgcagatccgaagacatgagtattccggagactt 44942580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39531344 - 39531231
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatat----tcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcag 96  Q
    ||||||| ||||||| |||| ||||||| ||||||| ||    ||||| ||||||||||||||||||||| |||||||| |||||||||||| ||| | |    
T  39531344 tgattcgggttgaaagattagctttgagaaagtgcagatccgatcaatgaatgactttggcgtcgtcaacgttgcagatccagagacatgagtattccgg 39531245  T
Q  97 agactttgaatataa 111  Q
    |||| ||||||||||    
T  39531244 agac-ttgaatataa 39531231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 39915688 - 39915765
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    ||||||| |||| |||||||||||||||||| |||| ||| |||||| |||||||||| ||| |||||| ||||||||    
T  39915688 gttgaaagattagctttgagcaagtgcatatccaatcaataactttgacgtcgtcaacgttgaagattcggagacatg 39915765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7771755 - 7771662
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| |||||||| |||||||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | ||||||||||    
T  7771755 tgattcaagttgaaagattaactttgagcaagtgcagatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggagacatgag 7771662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 2415718 - 2415773
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  2415718 tactttgtcgttttatgctattaacatggatgttgtgagtctgttcacaaattcat 2415773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 12215326 - 12215393
Alignment:
Q  8 agttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||| ||||  ||||||||||||||||| | || ||||||||| ||||||||||| ||||||||    
T  12215326 agttgaaagattagttttgagcaagtgcatatccgatcaatgacttttgcgtcgtcaacgttgcagat 12215393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 42396434 - 42396354
Alignment:
Q  13 aaatattaactttgagcaagtgcatattca---atta--atgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||| |||||||||||||||||||||   || |  |||||||||||||||||||| |||||||| | ||||||||||    
T  42396434 aaatattagctttgagcaagtgcatattcatcaatgacaatgactttggcgtcgtcaacgttgcagatcctgagacatgag 42396354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 20271030 - 20271096
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcattgttgtttgtt 188  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||| ||||||| || ||||||    
T  20271030 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcattcttttttgtt 20271096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 28040869 - 28040907
Alignment:
Q  48 tgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  28040869 tgactttggcgtcgtcaacattgcagattcggagacatg 28040907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 6635486 - 6635550
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaatataa 111  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| | |||| |||||||||||    
T  6635486 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggaga-tttgaatataa 6635550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 19645827 - 19645779
Alignment:
Q  129 tcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  19645827 tcgttttatgctattaacatggatgttgtgagtctgttcacagattcat 19645779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 42781339 - 42781387
Alignment:
Q  129 tcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||||  |||||||||||||||| |||||||| ||||||    
T  42781339 tcgttttatgctattaacatggatgttgtgagtttgttaacaaattcat 42781387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 28618918 - 28618973
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||| |||||| ||||| ||||||||||    
T  28618918 tactttgtcgttttatgctattaacatggatgatgtgagcctgttgacatattcat 28618973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 7151020 - 7151082
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||||| |||| || |||| || ||||||||||||||| ||||| |||||||| |||||||||    
T  7151020 tttgagtaagtacaaattcgatcaatgactttggcgtcatcaacgttgcagatccagagacat 7151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 23428490 - 23428544
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| ||| |||| | |||||||||| ||||| |||||    
T  23428490 aatgactttggcgtcgtcaacgttgtagatccggagacatgagtatttcggagac 23428544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 32347593 - 32347555
Alignment:
Q  50 actttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  32347593 actttggcgtcgtcaacattgcagatccggagacatgag 32347555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 17732269 - 17732216
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagaga 99  Q
    ||||||||||||||||||||| |||||||| |  ||||||||| ||||| ||||    
T  17732269 aatgactttggcgtcgtcaaccttgcagatccgtagacatgagtatttcggaga 17732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 34874078 - 34874135
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| || |||| ||||||||||||||||||||| ||||| || | ||||||||||    
T  34874078 agtgcagatccaatgaatgactttggcgtcgtcaacgttgcatatccggagacatgag 34874135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 37425440 - 37425493
Alignment:
Q  124 ctttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||| ||||||||||||  ||| |||||||||||| |||| ||||||||||    
T  37425440 ctttatcattttatgctattaacatagatgttgtgagtttgttcacatattcat 37425493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 177987 - 177931
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||||||||| |||||| |||||||| | |||||||||| ||| | |||||||    
T  177987 aatgactttggcgttgtcaacgttgcagatccggagacatgagtattccggagactt 177931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 17331566 - 17331622
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||||||||| |||||||| | |||||||||| ||| | |||||||    
T  17331566 aatgactttggtgtcgtcaacgttgcagatccggagacatgaggattccggagactt 17331622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 17523434 - 17523382
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||| |||||||| ||||||||||||||||| || | |||||| ||||||||    
T  17523434 tttgatcaagtgcaaattcaattaatgacttttgcattgtcaacgttgcagat 17523382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 20146017 - 20145961
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    |||||| || ||||||||||||  ||| |||||||||||| |||| |||||||||||    
T  20146017 tactttgtcattttatgctattaacattgatgttgtgagtttgttcacatattcatt 20145961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 29098027 - 29098083
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||| ||||||||||||||| ||||||||  ||||||||||| ||| | |||||||    
T  29098027 aatgattttggcgtcgtcaacgttgcagatcaagagacatgaggattccggagactt 29098083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 35906592 - 35906640
Alignment:
Q  129 tcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||||  |||||||| |||||| ||||| ||||||||||    
T  35906592 tcgttttatgctattaacatggatgatgtgagcctgttcacatattcat 35906640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 39179635 - 39179591
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  39179635 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 39179591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 201977 - 201878
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaata 108  Q
    |||||||||||| |||||| |||||| | ||||||| ||||| |||||||| ||||||||||||||| ||| |||||||| |||  ||||| ||||||||    
T  201977 gttgaaatattagctttgaacaagtgaaaattcaatcaatgattttggcgttgtcaacattgcagatccagtgacatgagtattcgagaga-tttgaata 201879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 201787 - 201730
Alignment:
Q  197 atttgtatttaattgatgtaatcaatcaatttaaatgaatatatatcatttattttta 254  Q
    |||||||||  |||||| || || |||||||||||||||| |||||||||||||||||    
T  201787 atttgtattgtattgatttactctatcaatttaaatgaatgtatatcatttattttta 201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 14657776 - 14657698
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| ||||||||||||||| ||||||||| || ||||||||||||||| ||||  |||||||| | ||||||||||    
T  14657776 ttgaaagattaactttgagcaaatgcatattcgatcaatgactttggcgtcatcaatgttgcagatccggagacatgag 14657698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 38277039 - 38277116
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    |||||||||||| |||||||||||| || || | || ||||||||||||||||||||| |||||||| ||||| ||||    
T  38277039 gttgaaatattagctttgagcaagttcaaatccgatcaatgactttggcgtcgtcaacgttgcagatacagagtcatg 38277116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 772660 - 772728
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagaga 99  Q
    |||||| || |||| ||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||    
T  772660 agtgcagatccaatcaatgactttggcgtcgtcaacattgaagatccagagacatgagtatttcggaga 772728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 21954744 - 21954665
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||||||||||||||| |||||||| | ||| ||||||    
T  21954744 gttgaaagattagctttgagcaagtgcaaatccgatcaatgactttggcgtcgtcaacgttgcagatccggagtcatgag 21954665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 253
Target Start/End: Original strand, 27535759 - 27535894
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattca---ttgttg--tttgttgatttcatatttgtatttaattgatgta 216  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| |||||||||   ||||||  ||||  || ||  ||||||||||  || ||||||    
T  27535759 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt-acatattcatccttgttgtttttgacgaatttgtatttgtattgtatcgatgta 27535857  T
Q  217 atcaatcaatttaaatgaatatatatcatttattttt 253  Q
     || ||||||||||||||||| ||||| |||||||||    
T  27535858 ctctatcaatttaaatgaataaatatcgtttattttt 27535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 28664824 - 28664782
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  28664824 aatgactttggcgtcgtcaacgttgcagattcagagacatgag 28664782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 4621293 - 4621200
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| ||||  ||||| |||||||| || | || ||||||||||| ||| |||||||||||||| | |||||||||| ||||| |||||||    
T  4621293 gttgaaagattagttttgaacaagtgcagatccgatcaatgactttggtgtcatcaacattgcagatccggagacatgagtatttcggagactt 4621200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 9137159 - 9137244
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||| ||||||| |||||||||||| || | ||||||||||||||||||| |||||||| | ||||||| || ||| | |||||||    
T  9137159 attagctttgagaaagtgcatattcgatcattgactttggcgtcgtcaacgttgcagatccggagacataagtattccggagactt 9137244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 39707473 - 39707580
Alignment:
Q  3 attcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||| ||||||| ||||||||||||||||||||| || |||| |||||||||| | || | ||| ||||| || | |||||||||| ||| | ||||| |    
T  39707473 attcaagttgaagtattaactttgagcaagtgcagatccaatcaatgactttgacatcattaacgttgcatatccggagacatgagtattccggagac-t 39707571  T
Q  103 tgaatataa 111  Q
    |||||||||    
T  39707572 tgaatataa 39707580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 47750058 - 47750105
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  47750058 cgttttatgctattaacatggatgttgtgagtctgttcacatattcat 47750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 5914646 - 5914596
Alignment:
Q  38 attcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  5914646 attcaattaatgactttgatatcgtcaacgttgcagattcagagacatgag 5914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 32587445 - 32587375
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||| |||||||||| |||| ||||||||||||||||||| | ||||||| ||| |||| || ||||||||    
T  32587445 attagctttgagcaactgcagattcaattaatgactttggtgacgtcaaccttgtagatccaaagacatga 32587375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 5436076 - 5436121
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacat 68  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  5436076 tttgagaaagtgcagattcaatgaatgactttggcgtcgtcaacat 5436121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 29352421 - 29352514
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| |||| ||||| ||||||| | |||| || ||||||||| ||||||||||| |||||||| | |||| ||||| ||| || ||||||    
T  29352421 gttgaaagattagctttgtgcaagtgtagattcgatcaatgacttttgcgtcgtcaacgttgcagatccggagagatgagtattccaaagactt 29352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 47156701 - 47156757
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    |||||| |||||||||| ||||  ||||||||||||||||||||| ||| |||||||    
T  47156701 tactttgtcgttttatgttattaacatggatgttgtgagtctgttcacaaattcatt 47156757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 7986208 - 7986263
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||| ||||| ||| ||||||    
T  7986208 tactttgtcgttttatgctattaacatggatgttgtgagcctgttcacagattcat 7986263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 21991001 - 21991048
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  21991001 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 21991048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 25855009 - 25854954
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| | |||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  25855009 tactttgttgttttatgctattaacatggatgttgtgagtctgtttacagattcat 25854954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 26017448 - 26017401
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  26017448 cgttttatgctattaacatggatgttgtgagtctgttcacagattcat 26017401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 30992613 - 30992566
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||||||||    
T  30992613 cgttttatgctattaacatagatgttgtgagtctgttcacatattcat 30992566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 37375845 - 37375790
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||| ||||||| |||| ||||||||||    
T  37375845 tactttgtcgttttatgctattaacatggatgctgtgagtttgttcacatattcat 37375790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 45482386 - 45482441
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  45482386 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcat 45482441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 6496087 - 6496165
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||| ||||||||||| |||||||| || | || ||| |||||| | |||||||  ||||||||| ||||||||||    
T  6496087 gttgaaagattaactttgaacaagtgcagatccgatcaataactttgacatcgtcaatgttgcagatttagagacatga 6496165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 17473635 - 17473593
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| | |||||| ||||||||||||    
T  17473635 aatgactttggcgtcgtcaacgtcgcagatccagagacatgag 17473593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 17579579 - 17579621
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| | |||||| ||||||||||||    
T  17579579 aatgactttggcgtcgtcaacgtcgcagatccagagacatgag 17579621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 21990900 - 21990942
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  21990900 aatgactttggcgtcgtcaacgttgcagatccggagacatgag 21990942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 26161189 - 26161231
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  26161189 aatgactttggcgtcgtcaacgttgcagatccggagacatgag 26161231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 36253168 - 36253222
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| ||| |||| | |||||||| ||||||| |||||    
T  36253168 aatgactttggcgtcgtcaacgttgtagatccggagacatgggaatttcggagac 36253222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 45949578 - 45949532
Alignment:
Q  29 caagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||| || |||| ||||||||||||||||||||| ||||||||    
T  45949578 caagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagat 45949532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 6646520 - 6646435
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttc 94  Q
    ||||||| ||||||||||| ||| || ||||||||| ||||| ||| || |||||||  |||||||| |||| | ||||| |||||    
T  6646520 gttgaaagattaactttgatcaaatgaatattcaatcaatgatttttgcatcgtcaatgttgcagatccagaaatatgagtatttc 6646435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 32643206 - 32643270
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaatataa 111  Q
    |||||||||||||||||| || |||||||| | |||||||||| ||| | ||||| ||||||||||    
T  32643206 aatgactttggcgtcgtccacgttgcagatccggagacatgaggattccggagac-ttgaatataa 32643270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 18754011 - 18754055
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||    
T  18754011 tactttgtcgttttatgctattaacatgaatgttgtgagtctgtt 18754055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 19895581 - 19895525
Alignment:
Q  31 agtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||| ||||||| ||||||||||||||| || || ||| |||||| |||||||||    
T  19895581 agtgcagattcaatcaatgactttggcgtcatccacgttgtagattcggagacatga 19895525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 34594312 - 34594268
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatatt 174  Q
    ||||||||||||||  |||||||||||||||| |||| |||||||    
T  34594312 cgttttatgctattaacatggatgttgtgagtttgttcacatatt 34594268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 36350395 - 36350439
Alignment:
Q  41 caattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||| |||| |||||||||||||||| |||||||||| |||||||    
T  36350395 caatcaatggctttggcgtcgtcaacgttgcagattcggagacat 36350439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 37399914 - 37399958
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  ||| |||||||||||||||||    
T  37399914 tactttgtcgttttatgctattaacatagatgttgtgagtctgtt 37399958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 39090320 - 39090376
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||| ||||  ||||||||||||||||||||| ||| ||| |||||    
T  39090320 aatgactttggagtcatcaatgttgcagattcagagacatgagtattacagtgactt 39090376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 41288194 - 41288250
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| ||| |||| | || ||||||| ||||| |||||||    
T  41288194 aatgactttggcgtcgtcaacgttgtagatccggatacatgagtatttcggagactt 41288250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43256484 - 43256420
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaa 65  Q
    |||||| |||||||||||||||||| |  |||||||||||| || ||| |||||  |||||||||    
T  43256484 tgattcaagttgaaatattaactttaattaagtgcatattccatcaataacttttacgtcgtcaa 43256420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 30813304 - 30813360
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| | |||||||||| |||||||||||||    
T  30813304 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggatttcagagactt 30813360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 4921807 - 4921637
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaata 108  Q
    ||||||| |||| ||||||||||||||| || | || ||||||||||  ||||||||| |||||||| |||||  ||||| ||| | | ||| |||||||    
T  4921807 gttgaaagattagctttgagcaagtgcagatccgatcaatgactttgttgtcgtcaacgttgcagatccagaggtatgagtattccggtgac-ttgaata 4921709  T
Q  109 ta--actagacatat-tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||    ||||||||| || ||| |||||||||||||||  |||| ||||| ||||| |||| ||| ||||||    
T  4921708 tagtcatagacatatgtattttgtcgttttatgctattaacatgaatgttatgagtttgttcacagattcat 4921637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 548670 - 548615
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||||||||| ||| ||||||    
T  548670 tactttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcat 548615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 13871533 - 13871467
Alignment:
Q  22 ctttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||| ||   || ||||||||||||||||||||| |||||||| | ||||||||||    
T  13871533 ctttgagcaagtgcaaatctgatcaatgactttggcgtcgtcaacgttgcagatccggagacatgag 13871467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 1106750 - 1106686
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactttgaatataa 111  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| | ||||| ||||||||||    
T  1106750 aatgactttggcgtcgtcaacgttgcagatccggagacatgagtattccggagac-ttgaatataa 1106686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 12156331 - 12156424
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||| | ||| ||||| ||||||||||||||||   |||||||| | ||||||| ||||||||| | |||||||| | ||| |||||||||    
T  12156331 gttgaaagactaagtttgaacaagtgcatattcaatccttgactttgacttcgtcaatattgcagatccggagacatgcgtattccagagactt 12156424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 23101334 - 23101249
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||||||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | ||||||||||    
T  23101334 gttgaaagattaactttgagcaagtgcaaatccgatcaatgacaatgactttggcgtcgtcaacgttgcagatccggagacatgag 23101249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 31395459 - 31395524
Alignment:
Q  23 tttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||||| ||||| ||||| | |||||||| |||||| |||||||||| |||| |||||    
T  31395459 tttgagcaagtgcagattcagttaataattttggcgttgtcaacgttgcagattcggagaaatgag 31395524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 6419741 - 6419685
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||  |||||||| | |||||||||| ||||| |||||||    
T  6419741 aatgactttggcgtcgtcaaagttgcagatccggagacatgagtatttcggagactt 6419685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 12481253 - 12481197
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| | |||||||||| ||| | |||||||    
T  12481253 aatgactttggcgtcgtcaacgttgcagatccggagacatgaggattccggagactt 12481197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 12654192 - 12654136
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||| ||||| |||||||||| |||||||||| ||| | |||||||    
T  12654192 aatgactttggcgtcatcaacgttgcagattcggagacatgagtattccggagactt 12654136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 13233899 - 13233851
Alignment:
Q  129 tcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  13233899 tcgttttatgctattaacatggatgttgtgagcctgttcacatattcat 13233851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 20845324 - 20845368
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||||||||    
T  20845324 tactttgtcgttttatgctattaacatggatgttgtgagtctgtt 20845368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 8978667 - 8978600
Alignment:
Q  8 agttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    |||||||| ||||  ||||| |||||||||||||||| ||||| ||| || |||||||| ||||||||    
T  8978667 agttgaaagattagttttgatcaagtgcatattcaatcaatgatttttgcatcgtcaacgttgcagat 8978600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 4394008 - 4394050
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  4394008 aatgactttggcgtcgtcaacgttgcagatccggagacatgag 4394050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 88
Target Start/End: Original strand, 23654488 - 23654530
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| | ||||||||||    
T  23654488 aatgactttggcgtcgtcaacgttgcagatccggagacatgag 23654530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 28943478 - 28943528
Alignment:
Q  22 ctttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgca 72  Q
    |||||| |||||||| ||||||| |||||||||| ||| ||||||||||||    
T  28943478 ctttgaacaagtgcaaattcaatcaatgactttgacgttgtcaacattgca 28943528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 6127508 - 6127565
Alignment:
Q  14 aatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgc 71  Q
    |||||||  ||||||||| | |||||||||| ||||||||| ||||||||||| ||||    
T  6127508 aatattagttttgagcaaatacatattcaatcaatgactttagcgtcgtcaacgttgc 6127565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 8644544 - 8644588
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  8644544 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 8644588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 29920707 - 29920663
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  29920707 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 29920663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 18204159 - 18204230
Alignment:
Q  2 gattcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcag 73  Q
    |||| |||||||||||||| |||||| |||||||| ||||||||||| | |||||| |||||||| ||||||    
T  18204159 gatttgagttgaaatattagctttgatcaagtgcagattcaattaataattttggcatcgtcaacgttgcag 18204230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 32778891 - 32778812
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||||||||||||||||||| || | || ||||||||| ||||||||||| ||||||||   ||||||||||    
T  32778891 gttgaaagattaactttgagcaagtgcagatccgatcaatgacttttgcgtcgtcaactttgcagatctggagacatgag 32778812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 10334372 - 10334450
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||| |||||||||| |||| || | || |||||||||||| |||||||| |||||||| | ||||||||||    
T  10334372 ttgaaatattagctttgagcaaatgcagatccgatcaatgactttggcatcgtcaacgttgcagatccggagacatgag 10334450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 20993002 - 20993079
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    ||||||| ||||||||||||||| |||| ||||||||||||| |||| | |||||||| ||||| ||| ||| |||||    
T  20993002 gttgaaaaattaactttgagcaaatgcagattcaattaatgattttgacatcgtcaacgttgcaaatttagaaacatg 20993079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 12248593 - 12248537
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||||||||| ||||||||||||||||||| | ||| |||||||||    
T  12248593 aatgactttggagtcgtcaactttgcagattcagagacatgggtattccagagactt 12248537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 41996866 - 41996989
Alignment:
Q  129 tcgttttatgctattcgcatggatgttgtgagtctgttaacatattcattgttgtttgttgatttcatatttgtatttaattgatgtaatcaatcaattt 228  Q
    |||||||||||||||  ||||||||||||||||||||| ||| ||||||  || ||||||  |  |  ||||| |||  || |||||| || ||||||||    
T  41996866 tcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctt-tttgtttttagcgaatttgcattatatcgatgtactcgatcaattt 41996964  T
Q  229 aaatgaatatatatcatttattttt 253  Q
    ||||||||  |||||||||||||||    
T  41996965 aaatgaatgaatatcatttattttt 41996989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 24791059 - 24791017
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  24791059 aatgactttggcgtcgtcaacgttgcagatccagagacatgag 24791017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 37128378 - 37128325
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||||||||||||||| |||||||| | |||||||||| |||||||||||    
T  37128378 aatgactttggcgtcgtcaac-ttgcagatccggagacatgagtatttcagagac 37128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10338764 - 10338671
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatat----tcaatta--atgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||| |||||||| |||| ||||||||||||||| ||    ||||| |  |||||||||||||||||||| |||||||| | ||||||||||    
T  10338764 tgattcaagttgaaaaattagctttgagcaagtgcagatccgatcaataacaatgactttggcgtcgtcaacgttgcagatccggagacatgag 10338671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 7579746 - 7579690
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||||||||||| |||| |||||||| |||||||||||| ||| | |||||||    
T  7579746 aatgactttggcgtcgccaacgttgcagatccagagacatgagtattccggagactt 7579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 10148183 - 10148239
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||| ||||||||||| |||||||| | |||||||||| ||||| |||||||    
T  10148183 aatgactttagcgtcgtcaacgttgcagatccggagacatgagtatttcggagactt 10148239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 19489024 - 19489092
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattc 77  Q
    ||||||| ||||||||||| |||||||| ||||||| ||||||||| ||   |||||| ||||||||||    
T  19489024 gttgaaagattaactttgatcaagtgcaaattcaatcaatgacttttgctcagtcaacgttgcagattc 19489092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 22787728 - 22787768
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  22787728 aatgactttggcgtcgtcaacattgcagatccggagacatg 22787768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 6220015 - 6219964
Alignment:
Q  24 ttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagat 75  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||| ||||||||    
T  6220015 ttgagcaagtgcagattcaatcaatgattttggcgtcttcaacgttgcagat 6219964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 10338621 - 10338574
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  10338621 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 10338574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 11162217 - 11162272
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||  |||||||||    
T  11162217 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcccatattcat 11162272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 13570557 - 13570510
Alignment:
Q  130 cgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  13570557 cgttttatgctattaacatggatgttgtgagtttgttcacatattcat 13570510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 23970981 - 23970926
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  23970981 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcat 23970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 24210482 - 24210521
Alignment:
Q  49 gactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  24210482 gactttggcgtcgtcaacgttgcagatccagagacatgag 24210521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 31874396 - 31874451
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||| || || ||||||||||    
T  31874396 tactttgtcgttttatgctattaacatggatgttgtgagcctcttcacatattcat 31874451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 36545579 - 36545524
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    |||||| |||||||||||||||  ||||||||||||||| ||||| ||| ||||||    
T  36545579 tactttgtcgttttatgctattaacatggatgttgtgagcctgttcacaaattcat 36545524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3204727 - 3204689
Alignment:
Q  1 tgattcgagttgaaatattaactttgagcaagtgcatat 39  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  3204727 tgattcaagttgaaagattaactttgagcaagtgcatat 3204689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4429256 - 4429302
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttg 55  Q
    ||||||| |||||||||||| |||||||||||||||  |||||||||    
T  4429256 gttgaaagattaactttgagaaagtgcatattcaatcgatgactttg 4429302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 14919297 - 14919251
Alignment:
Q  20 aactttgagcaagtgcatattcaattaatgactttggcgtcgtcaac 66  Q
    |||||||| | |||||| |||||||||||||||||||| ||||||||    
T  14919297 aactttgatccagtgcaaattcaattaatgactttggcatcgtcaac 14919251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 3925589 - 3925516
Alignment:
Q  29 caagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||| ||  ||| ||||||||||| ||||||||| |||||||||  |||||||||| ||| | |||||||    
T  3925589 caagtgcagatcaaatcaatgactttggagtcgtcaacgttgcagatttggagacatgagtattccggagactt 3925516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 10633115 - 10633050
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcaga 74  Q
    ||||||| |||| |||||| |||||| | ||||||| ||||| ||| ||||||||||| |||||||    
T  10633115 gttgaaagattagctttgatcaagtgtagattcaatcaatgatttttgcgtcgtcaacgttgcaga 10633050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 15288718 - 15288677
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||||||||||||||||| ||||| || |||||||||||    
T  15288718 aatgactttggcgtcgtcaacgttgcaaatccagagacatga 15288677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 15469087 - 15469046
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    ||||||||||||||||||||| ||||| || |||||||||||    
T  15469087 aatgactttggcgtcgtcaacgttgcaaatccagagacatga 15469046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 39067580 - 39067539
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatga 87  Q
    |||||||||||||||| |||| |||||||| |||||||||||    
T  39067580 aatgactttggcgtcgccaacgttgcagatccagagacatga 39067539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 10043087 - 10043131
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgtt 166  Q
    |||||| |||||||||||||||  |||||||||||||||| ||||    
T  10043087 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 10043131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 12329865 - 12329905
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatg 86  Q
    ||||||||||||||||||||| |||||||| | ||||||||    
T  12329865 aatgactttggcgtcgtcaacgttgcagatccggagacatg 12329905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 13576127 - 13576035
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||| |||||||||||||||||||| || | || || ||||||||| || ||||  |||||||| | |||| ||||| ||| | |||||||    
T  13576127 ttgaaagattaactttgagcaagtgcagatccgatcaacgactttggcatcttcaatgttgcagatccggagaaatgagtattcctgagactt 13576035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 18190649 - 18190593
Alignment:
Q  122 tactttatcgttttatgctattcgcatggatgttgtgagtctgttaacatattcatt 178  Q
    |||||| |||||||||||||||   ||||||||||||||| |||| ||| |||||||    
T  18190649 tactttgtcgttttatgctattaatatggatgttgtgagtttgttcacagattcatt 18190593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 31147715 - 31147644
Alignment:
Q  41 caattaatgactttggcgtcgtcaacattgcagattc-agagacatgagaatttcagagactttgaatataac 112  Q
    |||| |||||||||| ||||||| || ||||||| || ||||||||||| ||||| ||||| |||||||||||    
T  31147715 caatcaatgactttgacgtcgtccacgttgcagaatccagagacatgagtatttcggagac-ttgaatataac 31147644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 1900 - 1975
Alignment:
Q  10 ttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacat 85  Q
    |||||| |||| ||||||||||||||| || | || ||||||||||||||| ||||| ||||||||  ||||||||    
T  1900 ttgaaagattagctttgagcaagtgcagatccgatcaatgactttggcgtcatcaacgttgcagatcgagagacat 1975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 41563 - 41473
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagaga 99  Q
    ||||||| |||| ||||  |||||| || ||||||| ||| | ||||||||||||||| | | |||| |||||||||||| ||||||||||    
T  41563 gttgaaagattagctttctgcaagtacagattcaatcaataattttggcgtcgtcaacctggaagatccagagacatgagtatttcagaga 41473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 404168 - 404090
Alignment:
Q  22 ctttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagac 100  Q
    ||||||||| ||||| |||| || |||||||||| ||| ||||||||||||||| |  ||||||||| ||||| |||||    
T  404168 ctttgagcatgtgcagattcgatcaatgactttgacgttgtcaacattgcagatccgaagacatgagtatttcggagac 404090  T

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Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 7056 - 6971
Alignment:
Q  3 attcgagttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||| ||| ||| |||| ||| ||||||||||| || | || ||||||||||||||||| ||| |||||||| | ||||||||||    
T  7056 attcgggttaaaagattagcttggagcaagtgcagatccgatcaatgactttggcgtcgttaacgttgcagatccggagacatgag 6971  T

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Target: scaffold1379 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 1009 - 930
Alignment:
Q  9 gttgaaatattaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagattcagagacatgag 88  Q
    ||||||| |||| ||||||| || |||| |||| || ||||||||||| ||| ||||| |||||||| | ||||||||||    
T  1009 gttgaaagattagctttgagaaactgcagattcgatcaatgactttggtgtcatcaacgttgcagatccggagacatgag 930  T

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Target: scaffold0542 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 3985 - 4044
Alignment:
Q  17 attaactttgagcaagtgcatattcaattaatgactttggcgtcgtcaacattgcagatt 76  Q
    |||| |||||| |||||||| || |||| ||| |||||||||||||||||||| ||||||    
T  3985 attatctttgatcaagtgcagatccaatcaataactttggcgtcgtcaacattacagatt 4044  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 36850 - 36895
Alignment:
Q  132 ttttatgctattcgcatggatgttgtgagtctgttaacatattcat 177  Q
    ||||||||||||  ||||||||||||||| ||||| ||||||||||    
T  36850 ttttatgctattaacatggatgttgtgagcctgttcacatattcat 36895  T

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Target: scaffold1350 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 1812 - 1868
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    |||||||||||| |||||||| |||||||| |||| ||||||| ||| | |||||||    
T  1812 aatgactttggcatcgtcaacgttgcagatccagatacatgaggattccggagactt 1868  T

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Target: scaffold0536 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 3138 - 3194
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||| ||||||||| ||||| || | |||||||||| | |||||||||||    
T  3138 aatgactttggtgtcgtcaacgttgcaaatccggagacatgagtacttcagagactt 3194  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 35322 - 35378
Alignment:
Q  46 aatgactttggcgtcgtcaacattgcagattcagagacatgagaatttcagagactt 102  Q
    ||||||||||||||||||||| |||||||| | || ||||||| ||| | |||||||    
T  35322 aatgactttggcgtcgtcaacgttgcagatccggatacatgagtattccggagactt 35378  T

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