View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15335_low_4 (Length: 282)
Name: NF15335_low_4
Description: NF15335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15335_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 253
Target Start/End: Complemental strand, 48174484 - 48174252
Alignment:
| Q |
22 |
aaaacatacaaaaacaacaacatatatgcctgaaatccacaaatatcggaatctatgcatgtaaaaggacatgcacgtacctcaaaataatgtccattca |
121 |
Q |
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| T |
48174484 |
aaaacatacaaaaacaacaacatatatgcctgaaatccacaaatatcggaatctatgcatgtaaaaggacatgcacgtacctcaaaataatgtccattca |
48174385 |
T |
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| Q |
122 |
aattctcccccttttctctccgatacaacctcaaca-nnnnnnnngcattcccatcatcattgcatgcatggcttcctcttcctttcaccttttcttctt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48174384 |
aattctcccccttttctctccgatacaacctcaacatttttttttgcattcccatcatcattgcatgcatggcttcctcttcctttcaccttttcttctt |
48174285 |
T |
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| Q |
221 |
gatcattctccttccatttttatagcctatgct |
253 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
48174284 |
gatcattctccttccatttttatagcctctgct |
48174252 |
T |
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