View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15337_high_9 (Length: 308)

Name: NF15337_high_9
Description: NF15337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15337_high_9
NF15337_high_9
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-277)||(17978-18254)
[»] chr5 (17 HSPs)
chr5 (1-277)||(38144507-38144781)
chr5 (1-247)||(19512196-19512441)
chr5 (1-247)||(28370055-28370299)
chr5 (8-252)||(22750957-22751201)
chr5 (9-252)||(23528450-23528690)
chr5 (183-247)||(18407944-18408008)
chr5 (192-271)||(22438723-22438803)
chr5 (183-247)||(23111200-23111264)
chr5 (192-277)||(42961566-42961651)
chr5 (193-248)||(19236900-19236955)
chr5 (232-277)||(1856452-1856497)
chr5 (232-277)||(21674422-21674467)
chr5 (195-248)||(22461158-22461211)
chr5 (195-248)||(22467782-22467835)
chr5 (193-248)||(20781744-20781799)
chr5 (219-248)||(17021913-17021942)
chr5 (194-258)||(34830086-34830149)
[»] scaffold0025 (1 HSPs)
scaffold0025 (5-245)||(14398-14638)
[»] chr7 (31 HSPs)
chr7 (1-251)||(14422794-14423043)
chr7 (8-252)||(18873176-18873420)
chr7 (8-247)||(15167991-15168230)
chr7 (1-247)||(16009387-16009631)
chr7 (8-243)||(10895795-10896030)
chr7 (1-258)||(13743519-13743774)
chr7 (8-258)||(12709833-12710083)
chr7 (8-258)||(13122904-13123154)
chr7 (3-258)||(12590633-12590885)
chr7 (133-258)||(13007374-13007497)
chr7 (50-245)||(16677152-16677348)
chr7 (50-245)||(17651388-17651584)
chr7 (192-297)||(21230910-21231015)
chr7 (192-247)||(11382871-11382926)
chr7 (192-247)||(11389348-11389403)
chr7 (192-271)||(20311026-20311107)
chr7 (184-247)||(13679485-13679548)
chr7 (192-276)||(148619-148703)
chr7 (193-248)||(2971254-2971309)
chr7 (193-248)||(20906461-20906516)
chr7 (193-247)||(11311059-11311113)
chr7 (212-253)||(831628-831669)
chr7 (212-253)||(1196808-1196849)
chr7 (212-253)||(34958578-34958619)
chr7 (191-247)||(46625961-46626017)
chr7 (193-248)||(29181109-29181164)
chr7 (9-85)||(13007252-13007329)
chr7 (233-290)||(14945066-14945123)
chr7 (233-290)||(15372659-15372716)
chr7 (195-248)||(31155396-31155449)
chr7 (196-248)||(16091078-16091130)
[»] chr3 (38 HSPs)
chr3 (5-245)||(24192768-24193009)
chr3 (1-248)||(23370505-23370751)
chr3 (1-247)||(9534138-9534382)
chr3 (8-247)||(14762758-14762997)
chr3 (36-245)||(20247791-20247999)
chr3 (8-245)||(38310802-38311039)
chr3 (66-271)||(16801444-16801647)
chr3 (164-258)||(41455087-41455178)
chr3 (12-245)||(55499104-55499337)
chr3 (133-248)||(24933828-24933941)
chr3 (186-247)||(18929239-18929300)
chr3 (183-247)||(17240513-17240577)
chr3 (193-248)||(13302240-13302295)
chr3 (193-248)||(13323787-13323842)
chr3 (1-85)||(10414693-10414778)
chr3 (1-85)||(10421363-10421448)
chr3 (193-248)||(12033444-12033499)
chr3 (193-248)||(13312896-13312951)
chr3 (193-248)||(17131732-17131787)
chr3 (193-248)||(51301589-51301644)
chr3 (1-85)||(10389604-10389689)
chr3 (232-277)||(24122228-24122273)
chr3 (193-248)||(14865846-14865901)
chr3 (213-248)||(23392819-23392854)
chr3 (191-245)||(16801027-16801081)
chr3 (233-271)||(18127695-18127733)
chr3 (233-271)||(18135465-18135503)
chr3 (195-248)||(10389443-10389496)
chr3 (195-248)||(10414532-10414585)
chr3 (195-248)||(10421202-10421255)
chr3 (232-277)||(13967769-13967814)
chr3 (232-277)||(13973244-13973289)
chr3 (1-85)||(24933987-24934072)
chr3 (212-248)||(2247649-2247685)
chr3 (197-253)||(10833303-10833359)
chr3 (233-261)||(14543478-14543506)
chr3 (233-261)||(16829104-16829132)
chr3 (233-261)||(16837626-16837654)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-248)||(111496-111741)
scaffold0026 (8-258)||(11840-12090)
[»] chr1 (17 HSPs)
chr1 (1-247)||(20437024-20437269)
chr1 (133-271)||(41111977-41112112)
chr1 (183-247)||(32651563-32651627)
chr1 (183-247)||(18712790-18712854)
chr1 (192-247)||(19663517-19663572)
chr1 (191-247)||(20805320-20805376)
chr1 (192-247)||(11158093-11158148)
chr1 (191-245)||(10811785-10811839)
chr1 (193-248)||(20851132-20851187)
chr1 (193-248)||(20857759-20857814)
chr1 (193-248)||(21706276-21706331)
chr1 (193-248)||(21710818-21710873)
chr1 (217-247)||(24476350-24476380)
chr1 (217-247)||(25091418-25091448)
chr1 (213-246)||(18271338-18271371)
chr1 (213-246)||(18275992-18276025)
chr1 (9-85)||(41111855-41111932)
[»] chr6 (35 HSPs)
chr6 (1-258)||(10986170-10986426)
chr6 (1-247)||(23839008-23839253)
chr6 (9-293)||(18800255-18800538)
chr6 (1-247)||(4477667-4477912)
chr6 (8-271)||(29614124-29614386)
chr6 (36-247)||(23057783-23057993)
chr6 (113-258)||(930085-930229)
chr6 (133-271)||(12168305-12168440)
chr6 (9-271)||(19785847-19786104)
chr6 (133-271)||(19878398-19878533)
chr6 (9-245)||(21565214-21565449)
chr6 (133-258)||(19287214-19287337)
chr6 (133-271)||(19884174-19884309)
chr6 (163-248)||(34639986-34640069)
chr6 (183-248)||(34646660-34646725)
chr6 (192-297)||(24512794-24512899)
chr6 (183-248)||(25469704-25469767)
chr6 (195-247)||(9187498-9187550)
chr6 (191-247)||(25348486-25348542)
chr6 (191-245)||(25598643-25598697)
chr6 (191-247)||(25397172-25397228)
chr6 (183-248)||(31252413-31252478)
chr6 (191-247)||(19471335-19471391)
chr6 (191-245)||(2286769-2286823)
chr6 (213-247)||(18659450-18659484)
chr6 (213-247)||(24441673-24441707)
chr6 (195-248)||(11288668-11288721)
chr6 (9-85)||(12168183-12168260)
chr6 (195-248)||(15458492-15458545)
chr6 (195-248)||(15465087-15465140)
chr6 (9-85)||(19287092-19287169)
chr6 (9-85)||(19878276-19878353)
chr6 (9-85)||(19884052-19884129)
chr6 (220-248)||(28288509-28288537)
chr6 (213-253)||(29415551-29415591)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-297)||(11159-11446)
[»] scaffold0553 (1 HSPs)
scaffold0553 (1-248)||(10195-10441)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-248)||(1525-1771)
[»] chr8 (16 HSPs)
chr8 (1-248)||(44477433-44477678)
chr8 (1-248)||(44492591-44492836)
chr8 (8-245)||(8727735-8727972)
chr8 (8-258)||(23866430-23866680)
chr8 (1-277)||(27940822-27941099)
chr8 (133-258)||(17054533-17054656)
chr8 (183-247)||(23482053-23482117)
chr8 (191-247)||(18614271-18614327)
chr8 (192-297)||(14056514-14056619)
chr8 (192-297)||(25111976-25112081)
chr8 (191-247)||(39364919-39364975)
chr8 (193-247)||(29643386-29643440)
chr8 (193-248)||(24320670-24320725)
chr8 (191-247)||(21931696-21931752)
chr8 (220-277)||(21325736-21325794)
chr8 (232-277)||(30765880-30765925)
[»] chr2 (19 HSPs)
chr2 (1-247)||(19661454-19661698)
chr2 (1-247)||(6483528-6483772)
chr2 (1-247)||(6486995-6487239)
chr2 (50-271)||(26583687-26583904)
chr2 (9-245)||(23878826-23879060)
chr2 (9-245)||(23089057-23089292)
chr2 (9-247)||(23101463-23101700)
chr2 (133-248)||(5706023-5706137)
chr2 (183-247)||(23265133-23265197)
chr2 (183-247)||(23280201-23280265)
chr2 (186-247)||(21908353-21908414)
chr2 (192-277)||(6260142-6260227)
chr2 (191-247)||(24661576-24661632)
chr2 (193-248)||(10577-10632)
chr2 (193-248)||(25180929-25180984)
chr2 (148-257)||(26885139-26885246)
chr2 (195-258)||(23168288-23168351)
chr2 (195-258)||(23579545-23579608)
chr2 (240-277)||(19665044-19665081)
[»] scaffold0029 (1 HSPs)
scaffold0029 (34-271)||(111724-111960)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-271)||(102-368)
[»] scaffold1773 (1 HSPs)
scaffold1773 (8-255)||(995-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-255)||(49996-50241)
[»] scaffold0924 (1 HSPs)
scaffold0924 (8-258)||(740-990)
[»] chr4 (17 HSPs)
chr4 (8-258)||(8045822-8046071)
chr4 (8-271)||(11847923-11848191)
chr4 (133-248)||(53483646-53483760)
chr4 (192-297)||(15408139-15408244)
chr4 (191-247)||(8834895-8834951)
chr4 (191-247)||(13888641-13888697)
chr4 (193-245)||(14486661-14486713)
chr4 (191-247)||(15245215-15245271)
chr4 (191-242)||(22724691-22724742)
chr4 (212-253)||(15747551-15747592)
chr4 (191-247)||(15308120-15308176)
chr4 (193-248)||(16146830-16146885)
chr4 (193-248)||(27906266-27906321)
chr4 (217-247)||(15069781-15069811)
chr4 (217-247)||(15076381-15076411)
chr4 (233-269)||(1650182-1650219)
chr4 (191-248)||(14912081-14912138)
[»] scaffold0154 (1 HSPs)
scaffold0154 (78-297)||(30743-30962)
[»] scaffold0117 (2 HSPs)
scaffold0117 (34-258)||(1887-2109)
scaffold0117 (34-258)||(8564-8786)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-245)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-245)||(3624-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (133-253)||(1727-1845)
scaffold0796 (133-253)||(5750-5868)
[»] scaffold0456 (4 HSPs)
scaffold0456 (181-252)||(920-991)
scaffold0456 (181-252)||(8065-8136)
scaffold0456 (2-101)||(800-899)
scaffold0456 (2-101)||(7945-8044)
[»] scaffold0107 (1 HSPs)
scaffold0107 (192-297)||(40482-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (135-254)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (192-297)||(135473-135578)
[»] scaffold0235 (1 HSPs)
scaffold0235 (194-297)||(22543-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (192-271)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (183-247)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (183-247)||(116887-116951)
scaffold0004 (213-246)||(60441-60474)
[»] scaffold0461 (1 HSPs)
scaffold0461 (183-247)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (183-247)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (183-247)||(101928-101992)
[»] scaffold0634 (1 HSPs)
scaffold0634 (8-86)||(3478-3557)
[»] scaffold0124 (2 HSPs)
scaffold0124 (192-247)||(34276-34331)
scaffold0124 (191-248)||(35438-35495)
[»] scaffold0815 (1 HSPs)
scaffold0815 (196-258)||(1453-1515)
[»] scaffold0138 (1 HSPs)
scaffold0138 (191-247)||(12296-12352)
[»] scaffold2054 (1 HSPs)
scaffold2054 (195-258)||(717-780)
[»] scaffold0317 (1 HSPs)
scaffold0317 (184-247)||(1378-1441)
[»] scaffold0139 (2 HSPs)
scaffold0139 (192-247)||(14997-15052)
scaffold0139 (233-271)||(26892-26930)
[»] scaffold0096 (1 HSPs)
scaffold0096 (191-251)||(39503-39563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-257)||(493019-493082)
[»] scaffold0790 (1 HSPs)
scaffold0790 (219-258)||(5480-5519)
[»] scaffold0348 (2 HSPs)
scaffold0348 (193-248)||(9336-9391)
scaffold0348 (233-297)||(14604-14668)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-248)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-248)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (193-247)||(1913-1967)
[»] scaffold0609 (1 HSPs)
scaffold0609 (183-248)||(5857-5922)
[»] scaffold0261 (1 HSPs)
scaffold0261 (193-258)||(23559-23624)
[»] scaffold0335 (1 HSPs)
scaffold0335 (191-247)||(2628-2684)
[»] scaffold0053 (1 HSPs)
scaffold0053 (193-248)||(79490-79545)
[»] scaffold0067 (3 HSPs)
scaffold0067 (233-271)||(46708-46746)
scaffold0067 (233-261)||(55733-55761)
scaffold0067 (233-261)||(62119-62147)
[»] scaffold0481 (1 HSPs)
scaffold0481 (201-246)||(676-721)
[»] scaffold0249 (2 HSPs)
scaffold0249 (240-277)||(2219-2256)
scaffold0249 (195-248)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (191-247)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (198-247)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (193-245)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (191-247)||(121902-121958)
scaffold0031 (191-247)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (195-247)||(69749-69801)
[»] scaffold0005 (1 HSPs)
scaffold0005 (233-261)||(266108-266136)


Alignment Details
Target: scaffold0090 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 17978 - 18254
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17978 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 18077  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatca-tcaaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||| |||||||  ||||||||||||||||||    
T  18078 aacagaattaacatgaccattaccatttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagcta-agcaattaggtcaattttc 18176  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||    
T  18177 aaaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcg 18254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 163; Significance: 5e-87; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 38144781 - 38144507
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  38144781 tacaaatcttcatcaattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 38144682  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    |  ||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  38144681 at-agaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa--ttatgcaattaggtcaattttc 38144585  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38144584 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcg 38144507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 19512196 - 19512441
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  19512196 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 19512295  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    |  ||||||||||||| || ||||  ||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  19512296 at-agaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttc 19512393  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19512394 agaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 28370299 - 28370055
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  28370299 tacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 28370200  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  28370199 a-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 28370103  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28370102 agaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 22750957 - 22751201
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  22750957 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 22751055  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  22751056 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 22751153  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751154 ttatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 23528450 - 23528690
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatg-atcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaa 107  Q
    |||||||||| || ||||  ||||||| ||||||||||||||| || ||||||||||||| | ||||| |||| ||||  |||| | ||| |||  | ||    
T  23528450 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-aa 23528548  T
Q  108 ttaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 205  Q
     |||||| | | |||| ||||  || |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||    
T  23528549 ctaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaat 23528643  T
Q  206 tatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23528644 tatagattatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 271  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 277
Target Start/End: Original strand, 42961566 - 42961651
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 42961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 1856497 - 1856452
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 1856452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 21674467 - 21674422
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 21674422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 20781744 - 20781799
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  20781744 aattttcagaaatcatatattataattattgaaagataatcccacccttaccttag 20781799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 248
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  219 tattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 34830086 - 34830149
Alignment:
Q  194 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||| ||||  |||||||| ||||| || ||||||||||||||  ||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgcagaa 34830149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 5 - 245
Target Start/End: Complemental strand, 14638 - 14398
Alignment:
Q  5 aatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaaca 104  Q
    |||||||||||||||||||||||||||  | ||||||||| || ||||||||||||||| ||||| |||||||||||||| | |||||||||||||| ||    
T  14638 aatattcatcaatttatccaatcaatcatattttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaa-ca 14540  T
Q  105 gaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcaga 202  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  14539 gaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttcaga 14441  T
Q  203 aattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14440 aattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 14422794 - 14423043
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| ||||||||    
T  14422794 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattaca 14422893  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  14422894 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttc 14422991  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttt 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422992 agaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 18873176 - 18873420
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  18873176 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 18873274  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  18873275 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 18873372  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873373 ttatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 15167991 - 15168230
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  15167991 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 15168089  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  15168090 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 15168187  T
Q  205 ttatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  15168188 ttatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 16009387 - 16009631
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  ||||||||||| || ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  16009387 tacaaatcttcatcaattcatccaatcaatcataatttcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 16009486  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaaccct-aaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| ||| ||||| |||||||| |||||||| |   |||||||||||||||||||    
T  16009487 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaacccacaatttatcttccaaaacca--tgcaattaggtcaattttc 16009583  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16009584 agaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 10896030 - 10895795
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  10896030 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 10895932  T
Q  107 attaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 205  Q
    |||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||| ||||    
T  10895931 attaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttcaaaaat 10895833  T
Q  206 tatagattatgattattgagagatagtctcacccttac 243  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10895832 tatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 13743519 - 13743774
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||| ||||||||||||||||||| ||| |  |||||||| ||||| ||||||||||||| ||||||| |||||| |||| |||| ||| || | ||||    
T  13743519 tacaattattcatcaatttatccaaccaagcataatttcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataataca 13743618  T
Q  101 aacagaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt 198  Q
    |  | ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||     
T  13743619 agaa-aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt- 13743714  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13743715 caggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 258
Target Start/End: Complemental strand, 12710083 - 12709833
Alignment:
Q  8 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 105  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | |||||||||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  12710083 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatag 12709985  T
Q  106 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 203  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  12709984 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 12709888  T
Q  204 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12709887 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 258
Target Start/End: Complemental strand, 13123154 - 13122904
Alignment:
Q  8 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 105  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | |||||||||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  13123154 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattacaaatag 13123056  T
Q  106 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 203  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  13123055 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 13122959  T
Q  204 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13122958 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 258
Target Start/End: Complemental strand, 12590885 - 12590633
Alignment:
Q  3 caaatattcatcaatttatccaatcaatccaaatttcaatcaattcatg-atcacagcaacaacataggttaagttttcattctggacatcacattacaa 101  Q
    |||||||||||||||  || ||||  ||||||| ||||||||||| ||| || ||||||||||||| | ||||| |||||||||  |||| | ||| |||    
T  12590885 caaatattcatcaataaatacaattcatccaaaattcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaa 12590786  T
Q  102 acagaattaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
      | || |||||| | | |||| ||||  || |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |    
T  12590785 gaa-aactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-c 12590692  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12590691 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 13007374 - 13007497
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13007374 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 13007470  T
Q  232 tctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||    
T  13007471 tctcacccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  50 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcc-cgtcagaatcatcatcaa 148  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||    ||| | ||| ||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattacaccatcctcctcaaaatcatcatcaa 16677250  T
Q  149 -ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
     |||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16677251 accctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  50 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcc-cgtcagaatcatcatcaa 148  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||    ||| | ||| ||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattacaccatcctcctcaaaatcatcatcaa 17651486  T
Q  149 -ccctaaccctcaattt-attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
     |||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17651487 accctaacccttaattttatcttccaaaaactat-gcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 21231015 - 21230910
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 21230916  T
Q  292 ctctct 297  Q
    ||||||    
T  21230915 ctctct 21230910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||  ||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 13679485 - 13679548
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679485 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 148619 - 148703
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatc 276  Q
    |||||||||||||  ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatc 148703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| ||||||| || | ||| |||||||||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||| ||||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 29181164 - 29181109
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  29181164 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 29181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 13007252 - 13007329
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  13007252 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 13007329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 14945123 - 14945066
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctct 290  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||  ||||||||    
T  14945123 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 14945066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 15372716 - 15372659
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctct 290  Q
    |||||||||||||||| |||||||||||| | ||||||| ||||| ||  ||||||||    
T  15372716 ctcacccttaccttagatttgcagaagaaatgcacagcaaaatcggttcctaggctct 15372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 31155396 - 31155449
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 31155449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 16091078 - 16091130
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16091078 tttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 7e-83; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 5 - 245
Target Start/End: Original strand, 24192768 - 24193009
Alignment:
Q  5 aatattcatcaatttatccaatcaatccaaatttcaatcaattcatgat-cacagcaacaacataggttaagttttcattctggacatcacattacaaac 103  Q
    |||||||||||||||||||||||||||  | ||||||||| || ||||| |||||||||| ||||| |||||||||||||||| |||||||||||||| |    
T  24192768 aatattcatcaatttatccaatcaatcatattttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaa-c 24192866  T
Q  104 agaattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcag 201  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  24192867 agaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttcag 24192965  T
Q  202 aaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24192966 aaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 23370751 - 23370505
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  23370751 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 23370652  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  23370651 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttc 23370554  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370553 agaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 9534138 - 9534382
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||  |||||  |||| |||||||||||||||  |||| ||||||||    
T  9534138 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattaca 9534237  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||  |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  9534238 a-cagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 9534334  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9534335 agaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 14762997 - 14762758
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  14762997 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 14762899  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  14762898 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaa 14762801  T
Q  205 ttatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  14762800 ttatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 36 - 245
Target Start/End: Complemental strand, 20247999 - 20247791
Alignment:
Q  36 tttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgtc 134  Q
    |||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  | ||||||||||| ||||||| ||||||| ||    
T  20247999 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaa-aattaacatgatcattacccatttcccttc 20247901  T
Q  135 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247900 agaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 20247803  T
Q  234 tcacccttacct 245  Q
    ||||||||||||    
T  20247802 tcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 38311039 - 38310802
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||| ||| ||||||||| ||  ||||| ||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  |||    
T  38311039 attcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-aga 38310941  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||| ||||||||    
T  38310940 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatattcagaaa 38310843  T
Q  205 ttatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  38310842 ttatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 271
Target Start/End: Complemental strand, 16801647 - 16801444
Alignment:
Q  66 ataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattac-catttcccgtcagaatcatcatcaaccctaaccctcaattt 164  Q
    ||||||||||  ||||||||  |||||||||||||  || | ||||||||| |||||| |  ||| | ||| |||||||||||||||||||| |||||||    
T  16801647 ataggttaagaattcattctaaacatcacattacag-catatttaacatgatcattacaccattctcctcaaaatcatcatcaaccctaaccttcaattt 16801549  T
Q  165 attttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaatta 264  Q
      | | |||||||||  ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16801548 tatcttcaaaagctaa-gcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggatta 16801451  T
Q  265 cacagca 271  Q
    |||||||    
T  16801450 cacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 41455178 - 41455087
Alignment:
Q  164 tattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41455178 tattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  12 atcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaa 111  Q
    ||||||| |||||||||||   | |||||||||||| ||||||||||||||   |||| ||||| |||||||| | |||||||||||| |||| ||||||    
T  55499337 atcaattcatccaatcaattatattttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattac-aacataattaa 55499239  T
Q  112 catgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattata 209  Q
    ||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |   ||| ||||||||||||| | ||||||| |    
T  55499238 catgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcagttaggtcaattttcccgaaattaca 55499141  T
Q  210 gattat-gattattgagagatagtctcacccttacct 245  Q
     |||||  |||| ||||||||||||||||||||||||    
T  55499140 tattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 24933941 - 24933828
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| ||||||   |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24933941 tcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 24933845  T
Q  232 tctcacccttaccttag 248  Q
    |||||||||||||||||    
T  24933844 tctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10414778 - 10414693
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||||||||||| || ||||  ||||||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10414778 tacaaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10414693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10421448 - 10421363
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||||||||||| || ||||  ||||||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10421448 tacaaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10421363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||| |||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 10389689 - 10389604
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||||||||||| || ||||  ||| ||| ||||||||||| || |||  |||||||||||| ||||||| |||||||||    
T  10389689 tacaaatattcatcaattcatacaattcatcaaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattct 10389604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 24122273 - 24122228
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcg 24122228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 14865846 - 14865901
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  14865846 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 14865901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 248
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  213 tatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 16801027 - 16801081
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  16801027 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 16801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 18127733 - 18127695
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagca 271  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18127733 ctcacccttaccttagttttgcagaaaaaatacacagca 18127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 18135503 - 18135465
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagca 271  Q
    |||||||||||||||||||||||||| || |||||||||    
T  18135503 ctcacccttaccttagttttgcagaaaaaatacacagca 18135465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 10389496 - 10389443
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10389496 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 10414585 - 10414532
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10414585 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 10421255 - 10421202
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  10421255 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 13967814 - 13967769
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 13967769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 13973289 - 13973244
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 13973244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 24934072 - 24933987
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||||||||||| || ||||  ||| ||| ||||||||||| || |||  |||||||||||| | ||||| |||||||||    
T  24934072 tacaaatattcatcaattcatacaatacatcaaaaattcaatcaattaatggattgcagcaacaacatggattaagctttcattct 24933987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttag 248  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 10833359 - 10833303
Alignment:
Q  197 ttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 253  Q
    ||||||| ||||| | |||||||| |||  | |||||||||||||||||||||||||    
T  10833359 ttcagaatttatacactatgattactgaatgttagtctcacccttaccttagttttg 10833303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 14543506 - 14543478
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  14543506 ctcacccttaccttagttttgcagaagaa 14543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 16829132 - 16829104
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  16829132 ctcacccttaccttagttttgcagaagaa 16829104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 16837654 - 16837626
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  16837654 ctcacccttaccttagttttgcagaagaa 16837626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 111496 - 111741
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  111496 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 111595  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  111596 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 111692  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  111693 agaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 8 - 258
Target Start/End: Complemental strand, 12090 - 11840
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||| | |||||||||||||||||| || |||||||||||||||| | || | |||||||  |||    
T  12090 attcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattacaag-aga 11992  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  11991 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaa-ctat-gcaattaggtcaattttcagaaa 11894  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11893 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 20437269 - 20437024
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||    
T  20437269 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattaca 20437170  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | || ||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  20437169 a-cataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttc 20437072  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20437071 agaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 41111977 - 41112112
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41111977 tcagaatcatcatcaaaccctaactttcatcttatttttcaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 41112073  T
Q  232 tctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  41112074 tctcacccttaccttagttttgcagaa-aattagacagca 41112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 41111855 - 41111932
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  41111855 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 41111932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 147; Significance: 2e-77; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 10986426 - 10986170
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||    
T  10986426 tacaaatcttcatcaattcatccaatcaatcgtaatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattaca 10986327  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||     
T  10986326 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttt 10986229  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  10986228 agaaattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 23839008 - 23839253
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||    
T  23839008 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattaca 23839107  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| | |||||||||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||||    
T  23839108 a-cagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccctcaatttatcttccaaacactat-gcaattaggtcaattttc 23839205  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839206 agaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 293
Target Start/End: Original strand, 18800255 - 18800538
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | ||||||||||||  |||||||| |||||| |||| ||||| ||||||| || |||||||||||||| ||||||    
T  18800255 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaa-cagaat 18800353  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaattaggtcaattttcagaaatt 206  Q
    |||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||    
T  18800354 taacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaattaggtcaattttcagaaatt 18800451  T
Q  207 atagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcct 293  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||  |||||||||||    
T  18800452 atagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttcctaggctctcct 18800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 4477667 - 4477912
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| || ||||| | ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| ||||||||    
T  4477667 tacaaatctttatcaaatcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattaca 4477766  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||| ||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  4477767 a-cagaattagcatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttc 4477864  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4477865 agaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 29614386 - 29614124
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||| | |||||||||||||||||| || |||||||||||||||  ||||  || |||||  |||    
T  29614386 attcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacatt-caatacaag-aga 29614289  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| | |||  ||| |||| ||||||||||||||||||    
T  29614288 attaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattat-gcaactaggtcaattttcagaaa 29614190  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  29614189 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 29614124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 36 - 247
Target Start/End: Original strand, 23057783 - 23057993
Alignment:
Q  36 tttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccgtc 134  Q
    |||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  ||||||||||||| ||||||| ||||||| ||    
T  23057783 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-agaattaacatgatcattacccatttcccttc 23057881  T
Q  135 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    |||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23057882 agaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttcaggaattatagattatgattatcgagagatagtc 23057979  T
Q  234 tcacccttacctta 247  Q
    ||||||||||||||    
T  23057980 tcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 113 - 258
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  113 atgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattataga 211  Q
    |||| |||||||  ||||| |||||| ||||||||| ||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||| ||||||    
T  930229 atgatcattacccattcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaa-ctata-caattaggtcaattttcagaaactataga 930132  T
Q  212 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  930131 ttatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 12168305 - 12168440
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12168305 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 12168401  T
Q  232 tctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  12168402 tctcacccttaccttagttttgcagaa-aattagacagca 12168440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 271
Target Start/End: Complemental strand, 19786104 - 19785847
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaa 107  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||  |||| | ||| |||    ||    
T  19786104 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaa--gaaa 19786007  T
Q  108 ttaacatgaccattac-catttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 205  Q
     |||||| | | |||| ||||  || |||||||||||||| |||||||||  ||| |||||||||||||| ||||| ||| |||||||| ||||||||||    
T  19786006 ctaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaactttcattttattttccaaaa-ctatt-caactaggtcaa-tttcagaaat 19785912  T
Q  206 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  19785911 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 19785847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 19878398 - 19878533
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19878398 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19878494  T
Q  232 tctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  19878495 tctcacccttaccttagttttgcagaa-aattagacagca 19878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 21565449 - 21565214
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | |||||||||||| |||||||||||||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  21565449 ttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattac-aacataat 21565351  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 207  Q
    |||||||| |||||||  ||||| | |||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| |||||||    
T  21565350 taacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaattttccgaaatta 21565253  T
Q  208 tagattat-gattattgagagatagtctcacccttacct 245  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  21565252 aatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 19287214 - 19287337
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19287214 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19287310  T
Q  232 tctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||    
T  19287311 tctcacccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 19884174 - 19884309
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19884174 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-cagaaattatagattatgattattgagagatag 19884270  T
Q  232 tctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||| ||||||||||||||||| ||||| ||||||    
T  19884271 tctcaccctaaccttagttttgcagaa-aattagacagca 19884309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 34640069 - 34639986
Alignment:
Q  163 ttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34640069 ttattttccaaaa-ctatt-caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 34646725 - 34646660
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34646725 caattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 24512899 - 24512794
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 24512800  T
Q  292 ctctct 297  Q
    ||||||    
T  24512799 ctctct 24512794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 25469767 - 25469704
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25469767 caattaggtcaattt-cagaa-ttatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 31252413 - 31252478
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||| | ||||||||||||||||| ||||| || ||| | ||||| |||||||||||||||||    
T  31252413 caattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 2286823 - 2286769
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  2286823 tcaattttcagaagttatatattacaatcattgagagttagtctcacccttacct 2286769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 11288721 - 11288668
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 11288668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 12168183 - 12168260
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  12168183 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 12168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15458492 - 15458545
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 15465087 - 15465140
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 15465140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19287092 - 19287169
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19287092 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19287169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19878276 - 19878353
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19878276 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19884052 - 19884129
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcat-gatcacagcaacaacataggttaagttttcattct 85  Q
    |||||||||| || ||||  ||||||| |||||||||||||| ||| ||||||||||||| | ||||| |||| ||||    
T  19884052 ttcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttct 19884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 248
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  220 attgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  213 tatgattattgagagatagtctcacccttaccttagttttg 253  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 9 - 297
Target Start/End: Original strand, 11159 - 11446
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | ||||||||||||  ||||||||||||||  || | ||||| ||||||| || |||||||||||||| ||||||    
T  11159 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaa-cagaat 11257  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatt-tattttccaaaagctattgcaattaggtcaattttcagaaatt 206  Q
    |||||||| ||||||   |||||  ||||||||||||||| ||||||||||||||| |||||||||||| |||  |||||||||||||||||||||||||    
T  11258 taacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaa-ctaa-gcaattaggtcaattttcagaaatt 11355  T
Q  207 atagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcctctct 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||  |||||||| ||||||    
T  11356 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttcctaggctcttctctct 11446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 10441 - 10195
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  10441 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 10342  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  10341 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttc 10244  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10243 agaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 1771 - 1525
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| ||||||||    
T  1771 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattaca 1672  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| ||||||||| |||||||| |||||||| |||| ||||||||||||||||||    
T  1671 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactat-gcaattaggtcaattttc 1574  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1573 agaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 6e-74; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 44477433 - 44477678
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  44477433 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 44477532  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44477533 a-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 44477629  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44477630 agaaattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 44492591 - 44492836
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  44492591 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 44492690  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  44492691 a-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 44492787  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492788 agaaattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 245
Target Start/End: Complemental strand, 8727972 - 8727735
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| ||||||||| |||||  |||| |||||||||||||||| |||| ||||||||| ||||    
T  8727972 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaa-caga 8727874  T
Q  107 attaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaat 205  Q
    |||||||||| || ||||  | ||| ||||||||||| |||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  8727873 attaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactat-gcaattaggtcaattttcagaaat 8727775  T
Q  206 tatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  8727774 tatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 23866430 - 23866680
Alignment:
Q  8 attcatcaatttatccaatcaatccaaatttc--aatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacag 105  Q
    ||||||||||| ||||||||| ||  || |||  ||||| || | ||||| |||||||||| || ||||||||  |||||| |||| | |||||||| ||    
T  23866430 attcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatattacaaatag 23866528  T
Q  106 aattaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaa 203  Q
    ||||||||||| ||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |    
T  23866529 aattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagga 23866625  T
Q  204 attatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23866626 attataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 27941099 - 27940822
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||| | |||||  |||| |||| ||||||||||| |||| |||||||     
T  27941099 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattac- 27941001  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaat--ttattttccaaaagctattgcaattaggtcaattt 197  Q
    |||||||||||||||| || ||||  ||||| |||||||||||||| ||||||||  | ||||  ||||||| ||| | | |||  ||| |   ||||||    
T  27941000 aacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatca-aacaattt 27940902  T
Q  198 tcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  27940901 tcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 27940822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 17054533 - 17054656
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17054533 tcagaatcatcatcaaaccctaactttcatcttattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 17054629  T
Q  232 tctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||| |||||||||||    
T  17054630 tctcacccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 18614271 - 18614327
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 14056619 - 14056514
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||||||||  ||| |||| || ||||| ||  ||||||||     
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttcctaggctctt 14056520  T
Q  292 ctctct 297  Q
    ||||||    
T  14056519 ctctct 14056514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 297
Target Start/End: Original strand, 25111976 - 25112081
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||| ||| | | ||| |||||||||||||||||||||||||||||||| |||| ||||  ||| |||| || ||||| ||  ||||||||     
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtttctaggctctt 25112075  T
Q  292 ctctct 297  Q
    ||||||    
T  25112076 ctctct 25112081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 21325794 - 21325736
Alignment:
Q  220 attgagagatagtctcacccttaccttagttttgcag-aagaattacacagcacaatcg 277  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||| ||||||| |||||    
T  21325794 attgagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcg 21325736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 30765925 - 30765880
Alignment:
Q  232 tctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||||||||||  || | ||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcg 30765880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 19661698 - 19661454
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||| |||| |||||||||||||||  |||| ||||||||    
T  19661698 tacaaatcttcatcaattcatccaatcaatcataatttcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattaca 19661599  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  19661598 a-cagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaattttc 19661502  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  19661501 agaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 6483528 - 6483772
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  6483528 tacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 6483627  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  6483628 a-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 6483724  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6483725 agaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 6486995 - 6487239
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||||| |||||||||| |||| |||||||  |||||||||||||| ||||||||| |||||  |||| |||||||||||||||  |||| || |||||    
T  6486995 tacaaatcttcatcaattcatcccatcaatcataatttcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttaca 6487094  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    | |||||||||||||| || ||||  ||||| ||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  6487095 a-cagaattaacatgatcaatacccattcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattttc 6487191  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6487192 agaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 26583687 - 26583904
Alignment:
Q  50 tgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa- 148  Q
    ||||||||||||||  |||| ||| |  ||||||||| ||||||| |||||| || | ||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaa-catatttaacatgatcattaccctttcccctcagaatcatcatcaag 26583785  T
Q  149 ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T
Q  249 ttttgcagaagaattacacagca 271  Q
    |||||||||| ||||| ||||||    
T  26583883 ttttgcagaa-aattagacagca 26583904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 23878826 - 23879060
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| ||||||||||| | | |||||||||||| ||||||||| |||||  |||| ||||| |||||||||| |||||||||||| |||| |||    
T  23878826 ttcatcaattcatccaatcaattctattttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattac-aacataat 23878924  T
Q  109 taacatgaccatta-ccatttcccgtcagaatcatcatcaaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 207  Q
    |||||||| ||||| ||  ||||| |||||||||||| ||||||||||||||||||||   |||  ||| |   |||||||||||||||||  |||||||    
T  23878925 taacatgatcattaccccattcccctcagaatcatcaacaaccctaaccctcaattta--atcctcaaggttaagcaattaggtcaatttttcgaaatta 23879022  T
Q  208 tagattatgattattgagagatagtctcacccttacct 245  Q
    || || || |||| ||||||||||||||||||||||||    
T  23879023 tatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 23089292 - 23089057
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | |||||||||||| |||||||||||||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  23089292 ttcatcaattcatccaatcaattatattttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattac-aacataat 23089194  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 207  Q
    |||||||| |||||||  ||||| | |||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| |||||||    
T  23089193 taacatgatcattacccattccccttagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaattttccgaaatta 23089096  T
Q  208 tagattat-gattattgagagatagtctcacccttacct 245  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  23089095 aatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 23101700 - 23101463
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    ||||| |||| |||||||||||   | |||||||||||| ||||||||| |||||  |||| ||||| |||||||| | || ||||||||| |||| |||    
T  23101700 ttcatgaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattac-aacataat 23101602  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 207  Q
    |||||||| |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |    ||||||||||||||||| |||||||    
T  23101601 taacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaaacaattaggtcaattttccgaaatta 23101504  T
Q  208 tagattat-gattattgagagatagtctcacccttacctta 247  Q
     | |||||  |||| ||||||||||||||||||||||||||    
T  23101503 catattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattaatgagagatag 5706040  T
Q  232 tctcacccttaccttag 248  Q
    |||||||||||||||||    
T  5706039 tctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  186 ttaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 6260227 - 6260142
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||  ||| ||||| ||  ||||  | ||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  6260227 caattttcagaaaccatatattataatcgttgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcg 6260142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 26885139 - 26885246
Alignment:
Q  148 accctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||  |||||||| || ||||| | ||||| || |||| | ||||||||||||||||| |||| ||||||||| ||||| || |||||||||||||    
T  26885139 accctaattctcaattttttctccaagaactattcca-ttagattaattttcagaaattatacatta-gattattgaaagataatcccacccttacctta 26885236  T
Q  248 gttttgcaga 257  Q
    |  |||||||    
T  26885237 gaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 23168351 - 23168288
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 23579608 - 23579545
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||  ||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 19665081 - 19665044
Alignment:
Q  240 ttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||  |||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcg 19665044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 271
Target Start/End: Original strand, 111724 - 111960
Alignment:
Q  34 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattacc-atttcccg 132  Q
    |||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||| | |||||||  ||||||||||||| ||||||| |||||||     
T  111724 aatttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaag-agaattaacatgatcattacccatttccct 111822  T
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagata 230  Q
    |||||||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  111823 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctat-gcaattaggtcaatttttcagaaattatagattatgattattgagagata 111920  T
Q  231 gtctcacccttaccttagttttgcagaagaattacacagca 271  Q
    |||||||||||||||||||||||||||| ||||| ||||||    
T  111921 gtctcacccttaccttagttttgcagaa-aattagacagca 111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 102 - 368
Alignment:
Q  1 tacaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattaca 100  Q
    ||||| ||||||||||||||||||| |||||  |||||||| ||||| ||||||||| ||| ||||||| |||||| |||| |||| ||| || | ||||    
T  102 tacaattattcatcaatttatccaaccaatcataatttcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataataca 201  T
Q  101 aacagaattaacatgaccattaccatttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttc 199  Q
    |  | ||||||||||| |||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |    
T  202 agaa-aattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-c 297  T
Q  200 agaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  298 agaaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 995 - 1240
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||||||  |||    
T  995 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaag-aga 1092  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||    
T  1093 attaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-caggaa 1189  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1190 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 49996 - 50241
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||||||  |||    
T  49996 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattacaag-aga 50093  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||| ||    
T  50094 attaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-caggaa 50190  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50191 ttatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 8 - 258
Target Start/End: Complemental strand, 990 - 740
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  |||||||||||| || ||||||||| |||||||| || ||||||||| || ||| |||| | |||||||  ||     
T  990 attcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattacaag-agt 893  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||| ||||| ||||||| ||||||| ||| |||| ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  892 attatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactat-gcaattaggtcaattttcagaaa 794  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  793 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 258
Target Start/End: Complemental strand, 8046071 - 8045822
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||||||||||||| ||||||||||||||||||  | |||||||||||||||| |||| | |||||||  |||    
T  8046071 attcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattacaag-aga 8045973  T
Q  107 attaacatgaccattacc-atttcccgtcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaa 204  Q
    |||||||| | | ||||| ||||||| |||||||  || |||| ||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  8045972 attaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaa-ctat-gcaattaggtcaattt-cagaaa 8045876  T
Q  205 ttatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8045875 ttatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 11847923 - 11848191
Alignment:
Q  8 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||| ||| ||     
T  11847923 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataaa-agg 11848021  T
Q  107 attaacatgaccattaccatttcc-cgtcagaatcatcatcaa-ccctaaccctcaatttattttc------caaaagctattgcaattaggtcaatttt 198  Q
    |||||||||| |||||||  |||| | |||||||| ||||||| ||||||||||||||| |||||       ||||| |||| || | ||||||||||||    
T  11848022 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaa-ctat-gccactaggtcaatttt 11848119  T
Q  199 cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  11848120 caggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagca 11848191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 53483646 - 53483760
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  53483646 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 53483743  T
Q  232 tctcacccttaccttag 248  Q
    |||||||||||||||||    
T  53483744 tctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 192 - 297
Target Start/End: Original strand, 15408139 - 15408244
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||  ||| ||||| | ||||| ||  ||||||||     
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttcctaggctctt 15408238  T
Q  292 ctctct 297  Q
    ||||||    
T  15408239 ctctct 15408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    ||||||||||||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcaccctta 242  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  212 ttatgattattgagagatagtctcacccttaccttagttttg 253  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 16146885 - 16146830
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  16146885 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 16146830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 27906266 - 27906321
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| |||||||| ||||| ||||| || |||||||| |||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  217 attattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 269
Target Start/End: Complemental strand, 1650219 - 1650182
Alignment:
Q  233 ctcacccttaccttagttttgcag-aagaattacacag 269  Q
    |||||||||||||||||||||||| |||||||||||||    
T  1650219 ctcacccttaccttagttttgcagaaagaattacacag 1650182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 14912081 - 14912138
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  14912081 tcaattttcagaagttatatattacaatcattgagagttagtctaacccttaccttag 14912138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 78 - 297
Target Start/End: Original strand, 30743 - 30962
Alignment:
Q  78 ttcattctggacatcacattacaaacagaattaacatgaccattac-catttcccgtcagaatcatcatcaa-ccctaaccctcaattt-attttccaaa 174  Q
    ||||||||| ||||||| |||||| || | ||||||||| | |||| |  ||||| ||| |||||||||||| |||||| ||||||||| |  |||||||    
T  30743 ttcattctgcacatcactttacaa-catatttaacatgatcgttacaccattcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaa 30841  T
Q  175 agctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaa 274  Q
    | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  30842 a-ctat-gcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaa 30939  T
Q  275 tcgtttaataggctctcctctct 297  Q
    ||| ||  |||||||||||||||    
T  30940 tcgattcctaggctctcctctct 30962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 258
Target Start/End: Complemental strand, 2109 - 1887
Alignment:
Q  34 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgt 133  Q
    |||||||||||| | ||||||||||||||||||  | ||||||||||||| || |||| | |||||||  ||||||||||| | |||||||  ||||  |    
T  2109 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattacaag-agaattaacataatcattacccattcca-t 2012  T
Q  134 cagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagatag 231  Q
    || |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2011 caaaatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcagaaattatagattatgattattgagatatag 1914  T
Q  232 tctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||    
T  1913 tctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 258
Target Start/End: Complemental strand, 8786 - 8564
Alignment:
Q  34 aatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaattaacatgaccattaccatttcccgt 133  Q
    |||||||||||| | ||||||||||||||||||  | ||||||||||||| || |||| | |||||||  ||||||||||| | |||||||  ||||  |    
T  8786 aatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattacaag-agaattaacataatcattacccattcca-t 8689  T
Q  134 cagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaatttt-cagaaattatagattatgattattgagagatag 231  Q
    || |||||||||||| ||||||||||||| ||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  8688 cataatcatcatcaaaccctaaccctcaaattattttccaaaa-ctata-caattaggtcaatttttcagaaattatagattatgattattgagatatag 8591  T
Q  232 tctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||||||||||||||||    
T  8590 tctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3531 - 3295
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | ||||||||||||  ||||||||||||||  |||| ||||| |||||||||| |||||||||||| |||| |||    
T  3531 ttcatcaattcatccaatcaattatattttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattac-aacaaaat 3433  T
Q  109 taacatga-ccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatt 206  Q
    ||||||||  |||||||  ||||| |||||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| ||||||    
T  3432 taacatgattcattacccattcccctcagaatcatcatcaaaccctaaccctcaatt--ttatccccaaggttaagcaattaggtcaattttccgaaatt 3335  T
Q  207 atagattat-gattattgagagatagtctcacccttacct 245  Q
    | | |||||  |||| ||||||||||||||||||||||||    
T  3334 acatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 3859 - 3624
Alignment:
Q  9 ttcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacagaat 108  Q
    |||||||||| |||||||||||   | |||||||||||| ||||||||| |||||  |||| ||||| |||||||| | |||||||||||| |||| |||    
T  3859 ttcatcaattcatccaatcaattatattttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattac-aacataat 3761  T
Q  109 taacatgaccattaccatttcccgtcagaatcatcatc-aaccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaatta 207  Q
    |||||||| |||||||  | ||| |||||||||||||| |||||||||||||||||  || |||  ||| |   |||||||||||||||||| |||||||    
T  3760 taacatgatcattacccatccccctcagaatcatcatcaaaccctaaccctcaatt--ttatcctcaaggttaagcaattaggtcaattttccgaaatta 3663  T
Q  208 tagattat-gattattgagagatagtctcacccttacct 245  Q
     | |||||  |||| ||||||||||||||||||||||||    
T  3662 catattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 1845 - 1727
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  1845 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 1749  T
Q  232 tctcacccttaccttagttttg 253  Q
    ||||||||||||||||||||||    
T  1748 tctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 253
Target Start/End: Complemental strand, 5868 - 5750
Alignment:
Q  133 tcagaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatag 231  Q
    |||||||||||||||| |||||||  |||  ||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  5868 tcagaatcatcatcaaaccctaactttcatattattttccaaaa-ctatt-caattaggtcaattt-caggaattatagattatgattattgagagatag 5772  T
Q  232 tctcacccttaccttagttttg 253  Q
    ||||||||||||||||||||||    
T  5771 tctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 920 - 991
Alignment:
Q  181 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  920 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 8065 - 8136
Alignment:
Q  181 tgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagtttt 252  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8065 tgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 800 - 899
Alignment:
Q  2 acaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaa 101  Q
    ||||||||||||||||||||||||||  ||  |||| ||||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  800 acaaatattcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 7945 - 8044
Alignment:
Q  2 acaaatattcatcaatttatccaatcaatccaaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaa 101  Q
    ||||||||||||||||||||||||||  ||  |||| ||||||||| |||||||||||||||||| || |||||||||||||||| ||||||||||||||    
T  7945 acaaatattcatcaatttatccaatccctcataattccaatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaa 8044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 40587 - 40482
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||||| ||  ||||||||     
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcctaggctctt 40488  T
Q  292 ctctct 297  Q
    ||||||    
T  40487 ctctct 40482  T

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Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  135 agaatcatcatcaa-ccctaaccctcaatttattttccaaaagctattgcaattaggtcaattttcagaaattatagattatgattattgagagatagtc 233  Q
    |||||||||||||| ||||||   |||  ||||||| ||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactatt-caattaggtcaattt-caggaattatagattatgattattgagagatagtc 45289  T
Q  234 tcacccttaccttagttttgc 254  Q
    ||||||||||||||| |||||    
T  45288 tcacccttaccttagatttgc 45268  T

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Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 297
Target Start/End: Original strand, 135473 - 135578
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctc 291  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||  ||| ||||||| ||||| ||  ||||||||     
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttcttaggctctt 135572  T
Q  292 ctctct 297  Q
    ||||||    
T  135573 ctctct 135578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 22646 - 22543
Alignment:
Q  194 attttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcct 293  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||| ||  |||||||| ||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttcctaggctcttct 22547  T
Q  294 ctct 297  Q
    ||||    
T  22546 ctct 22543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaagaattacacagca 271  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

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Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  213 tatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3478 - 3557
Alignment:
Q  8 attcatcaatttatccaatcaatcc-aaatttcaatcaattcatgatcacagcaacaacataggttaagttttcattctg 86  Q
    ||||||||||| |||||||||  |  ||||||||||||||| |||||||||||||||||| || ||||||||||||||||    
T  3478 attcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctg 3557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 248
Target Start/End: Complemental strand, 35495 - 35438
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||| ||||| ||||  || |||||||| |||||| |||||||||||||    
T  35495 tcaattttcagaagttatacattacaatcattgagagttagtcttacccttaccttag 35438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  196 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 717 - 780
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||| |||| ||| ||||| ||||| || ||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcagaa 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 1378 - 1441
Alignment:
Q  184 aattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||||| |||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1378 aattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  192 caattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 26892 - 26930
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagca 271  Q
    |||||||||||||||||||||||||| || |||||||||    
T  26892 ctcacccttaccttagttttgcagaaaaaatacacagca 26930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 251  Q
    ||||||||| ||||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 493082 - 493019
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 257  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493082 aattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  219 tattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 14668 - 14604
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagcacaatcgtttaataggctctcctctct 297  Q
    |||||||||||||||| |||||||||  ||| ||||||| ||||| || ||||||||| ||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttcataggctcttctctct 14604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 5922 - 5857
Alignment:
Q  183 caattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||| | ||||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  5922 caattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 23624 - 23559
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 258  Q
    ||||||||||||||||| |||||||| ||| | ||||| || ||||||||||||||  ||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 79545 - 79490
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| | ||||||| |||||| ||||| || ||||||||||||||    
T  79545 aattttcagaaattacatattatgactattgaaagataatcccacccttaccttag 79490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 46746 - 46708
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaattacacagca 271  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagca 46708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 55761 - 55733
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  55761 ctcacccttaccttagttttgcagaagaa 55733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 62147 - 62119
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  62147 ctcacccttaccttagttttgcagaagaa 62119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 721 - 676
Alignment:
Q  201 gaaattatagattatgattattgagagatagtctcacccttacctt 246  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  721 gaaattatacattaagatcattgagagttagtctcacccttacctt 676  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 2256 - 2219
Alignment:
Q  240 ttaccttagttttgcagaagaattacacagcacaatcg 277  Q
    |||||||||||||||||||  |||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcg 2219  T

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Target: scaffold0249; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 13947 - 13894
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 248  Q
    ||||||||||||||| ||||| || ||||| ||||| || ||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 732 - 788
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||| ||||| ||||| || |||||||| ||| ||||||| |||||||    
T  732 tcaattttcagaagttatatattataatcattgagagttagcctcacccctacctta 788  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 11630 - 11681
Alignment:
Q  198 tcagaaattataga--ttatgattattgagagatagtctcacccttacctta 247  Q
    |||||||||||| |  |||| ||||||||||| |||||||||||||||||||    
T  11630 tcagaaattatataatttataattattgagagttagtctcacccttacctta 11681  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 73285 - 73337
Alignment:
Q  193 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 245  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||    
T  73285 aattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 121902 - 121958
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  121902 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 121958  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 132778 - 132834
Alignment:
Q  191 tcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    ||||||||||||  ||||| ||||| || |||||||| ||| |||||||||||||||    
T  132778 tcaattttcagattttatatattataatcattgagagttagcctcacccttacctta 132834  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 69749 - 69801
Alignment:
Q  195 ttttcagaaattatagattatgattattgagagatagtctcacccttacctta 247  Q
    |||||| |||||||| |||| ||| ||||| || |||||||||||||||||||    
T  69749 ttttcataaattatatattaagatcattgaaagttagtctcacccttacctta 69801  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Original strand, 266108 - 266136
Alignment:
Q  233 ctcacccttaccttagttttgcagaagaa 261  Q
    |||||||||||||||||||||||||||||    
T  266108 ctcacccttaccttagttttgcagaagaa 266136  T

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