View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15338_low_6 (Length: 464)

Name: NF15338_low_6
Description: NF15338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15338_low_6
NF15338_low_6
[»] chr5 (68 HSPs)
chr5 (137-457)||(1464811-1465130)
chr5 (264-449)||(16937801-16937986)
chr5 (273-449)||(12425538-12425716)
chr5 (272-458)||(9202674-9202860)
chr5 (17-118)||(1464728-1464825)
chr5 (302-437)||(16457935-16458070)
chr5 (321-445)||(39105435-39105559)
chr5 (278-449)||(29925808-29925978)
chr5 (267-449)||(7674615-7674796)
chr5 (264-403)||(7705916-7706054)
chr5 (276-378)||(7808543-7808645)
chr5 (280-420)||(7984965-7985105)
chr5 (270-346)||(3520647-3520723)
chr5 (264-369)||(39248146-39248246)
chr5 (311-448)||(2568625-2568762)
chr5 (264-449)||(10639920-10640105)
chr5 (265-420)||(41534437-41534589)
chr5 (265-377)||(499650-499762)
chr5 (277-448)||(11700130-11700301)
chr5 (265-445)||(34736446-34736626)
chr5 (273-449)||(40426732-40426908)
chr5 (265-423)||(41419313-41419470)
chr5 (314-445)||(6587076-6587206)
chr5 (301-407)||(12857660-12857765)
chr5 (357-449)||(10272442-10272534)
chr5 (264-340)||(32941545-32941622)
chr5 (265-378)||(39594845-39594958)
chr5 (265-417)||(43300877-43301029)
chr5 (264-343)||(1773024-1773101)
chr5 (310-429)||(7907868-7907987)
chr5 (323-430)||(17368662-17368768)
chr5 (266-344)||(9107162-9107240)
chr5 (301-407)||(12857293-12857398)
chr5 (364-449)||(32372591-32372677)
chr5 (295-341)||(41981652-41981698)
chr5 (284-443)||(7319379-7319539)
chr5 (362-449)||(32703292-32703377)
chr5 (266-350)||(38033947-38034032)
chr5 (308-417)||(38104820-38104927)
chr5 (354-449)||(4014432-4014527)
chr5 (272-352)||(11064730-11064810)
chr5 (277-337)||(15015922-15015982)
chr5 (267-346)||(32849247-32849327)
chr5 (355-446)||(41957460-41957551)
chr5 (299-375)||(42228080-42228156)
chr5 (388-451)||(42646880-42646944)
chr5 (301-403)||(7318965-7319064)
chr5 (307-378)||(12459963-12460033)
chr5 (264-367)||(42583260-42583363)
chr5 (324-378)||(706501-706555)
chr5 (264-338)||(6521156-6521230)
chr5 (324-378)||(8334609-8334663)
chr5 (354-416)||(13697767-13697828)
chr5 (276-449)||(34102243-34102417)
chr5 (307-377)||(38728441-38728510)
chr5 (264-378)||(42100349-42100463)
chr5 (265-345)||(8651271-8651352)
chr5 (278-379)||(15246870-15246971)
chr5 (321-378)||(17258859-17258915)
chr5 (314-347)||(24030144-24030177)
chr5 (297-445)||(25461062-25461209)
chr5 (391-451)||(34205204-34205265)
chr5 (300-345)||(40452292-40452337)
chr5 (388-443)||(443908-443964)
chr5 (327-378)||(8089319-8089371)
chr5 (311-407)||(37954696-37954791)
chr5 (302-346)||(39154960-39155004)
chr5 (303-375)||(41535422-41535494)
[»] chr3 (72 HSPs)
chr3 (267-446)||(21367637-21367816)
chr3 (266-449)||(584013-584196)
chr3 (266-421)||(24085258-24085413)
chr3 (265-449)||(34610725-34610909)
chr3 (264-442)||(402460-402638)
chr3 (278-439)||(46886624-46886785)
chr3 (264-444)||(39980701-39980881)
chr3 (299-446)||(20257505-20257653)
chr3 (280-449)||(30443860-30444029)
chr3 (265-440)||(20880452-20880627)
chr3 (270-421)||(39602135-39602285)
chr3 (272-449)||(31403325-31403503)
chr3 (264-449)||(25447163-25447347)
chr3 (264-378)||(26878238-26878352)
chr3 (299-404)||(37389196-37389300)
chr3 (277-440)||(46778122-46778284)
chr3 (272-346)||(31365114-31365188)
chr3 (264-378)||(38902104-38902217)
chr3 (301-448)||(2719437-2719583)
chr3 (314-449)||(20170490-20170625)
chr3 (310-449)||(21574458-21574595)
chr3 (383-449)||(30956662-30956729)
chr3 (383-449)||(30972474-30972541)
chr3 (299-378)||(45264319-45264398)
chr3 (265-374)||(33046717-33046829)
chr3 (264-441)||(42747700-42747872)
chr3 (278-378)||(53762326-53762426)
chr3 (278-429)||(18405763-18405914)
chr3 (354-441)||(28622007-28622094)
chr3 (265-402)||(34235012-34235150)
chr3 (311-430)||(54837000-54837118)
chr3 (323-449)||(30573892-30574017)
chr3 (325-451)||(36631030-36631156)
chr3 (272-343)||(43046738-43046808)
chr3 (300-403)||(46031004-46031106)
chr3 (264-346)||(47903998-47904081)
chr3 (376-449)||(14145879-14145953)
chr3 (308-429)||(22203417-22203537)
chr3 (309-403)||(37273148-37273240)
chr3 (308-420)||(33965451-33965563)
chr3 (322-449)||(1816550-1816676)
chr3 (364-451)||(35959474-35959561)
chr3 (354-429)||(40665416-40665491)
chr3 (308-400)||(47513670-47513760)
chr3 (264-346)||(11253570-11253653)
chr3 (354-454)||(33883758-33883857)
chr3 (264-346)||(44014716-44014799)
chr3 (324-403)||(45541585-45541662)
chr3 (324-399)||(47249465-47249538)
chr3 (265-449)||(24684741-24684926)
chr3 (272-346)||(31365235-31365309)
chr3 (362-447)||(33405182-33405268)
chr3 (265-334)||(45590732-45590802)
chr3 (264-337)||(47132397-47132468)
chr3 (307-377)||(50952372-50952441)
chr3 (277-346)||(13715503-13715572)
chr3 (307-404)||(23808026-23808121)
chr3 (334-379)||(23816255-23816300)
chr3 (328-377)||(27290884-27290932)
chr3 (265-340)||(32582816-32582888)
chr3 (308-345)||(34637947-34637984)
chr3 (404-449)||(44061081-44061126)
chr3 (404-449)||(48397613-48397658)
chr3 (299-418)||(53789416-53789533)
chr3 (272-344)||(22892-22964)
chr3 (315-407)||(901934-902025)
chr3 (355-446)||(1217809-1217900)
chr3 (326-378)||(5391917-5391968)
chr3 (355-407)||(25185995-25186046)
chr3 (313-377)||(32711464-32711527)
chr3 (324-376)||(39723219-39723270)
chr3 (166-222)||(45021461-45021517)
[»] chr4 (76 HSPs)
chr4 (264-448)||(17822783-17822967)
chr4 (264-451)||(27043748-27043935)
chr4 (264-401)||(13126494-13126630)
chr4 (264-440)||(35571549-35571725)
chr4 (264-376)||(49939869-49939981)
chr4 (264-416)||(54426043-54426195)
chr4 (264-344)||(49940085-49940165)
chr4 (300-445)||(25332745-25332891)
chr4 (313-449)||(17884035-17884174)
chr4 (266-421)||(49202640-49202792)
chr4 (267-451)||(22030168-22030352)
chr4 (264-345)||(39691067-39691148)
chr4 (301-449)||(50681044-50681192)
chr4 (273-404)||(25904150-25904280)
chr4 (299-447)||(1706591-1706739)
chr4 (323-447)||(37863932-37864053)
chr4 (264-348)||(18815091-18815175)
chr4 (354-449)||(52746848-52746943)
chr4 (276-448)||(22666456-22666629)
chr4 (267-445)||(52315118-52315296)
chr4 (329-449)||(3155570-3155690)
chr4 (298-449)||(47118918-47119068)
chr4 (266-369)||(15173223-15173326)
chr4 (264-418)||(21731574-21731728)
chr4 (276-403)||(22662024-22662150)
chr4 (391-449)||(25885826-25885885)
chr4 (274-344)||(34430626-34430696)
chr4 (272-346)||(39011054-39011128)
chr4 (272-448)||(40174531-40174701)
chr4 (356-449)||(42685391-42685484)
chr4 (332-449)||(55414406-55414523)
chr4 (310-454)||(2996535-2996678)
chr4 (303-449)||(29774206-29774353)
chr4 (265-378)||(41336798-41336911)
chr4 (266-449)||(23459595-23459777)
chr4 (323-446)||(28300277-28300399)
chr4 (272-346)||(52172794-52172869)
chr4 (265-437)||(20031728-20031901)
chr4 (295-373)||(20719746-20719824)
chr4 (299-448)||(29912917-29913064)
chr4 (300-346)||(39603124-39603170)
chr4 (308-346)||(45622310-45622348)
chr4 (308-377)||(1137751-1137819)
chr4 (333-448)||(1407924-1408040)
chr4 (357-421)||(16494816-16494880)
chr4 (273-346)||(29657454-29657527)
chr4 (265-377)||(37575855-37575967)
chr4 (357-449)||(51630078-51630170)
chr4 (354-449)||(29263337-29263432)
chr4 (310-378)||(42461289-42461356)
chr4 (277-337)||(49003973-49004033)
chr4 (323-418)||(50662715-50662810)
chr4 (264-407)||(26783-26924)
chr4 (404-451)||(6927551-6927598)
chr4 (376-430)||(16200010-16200065)
chr4 (326-377)||(43886112-43886162)
chr4 (314-449)||(55064800-55064937)
chr4 (265-346)||(6987660-6987742)
chr4 (376-449)||(9760407-9760481)
chr4 (264-378)||(25571298-25571411)
chr4 (286-360)||(25903861-25903934)
chr4 (264-377)||(27123270-27123383)
chr4 (264-346)||(29388684-29388766)
chr4 (365-430)||(42121474-42121539)
chr4 (277-403)||(55302263-55302388)
chr4 (265-346)||(437083-437164)
chr4 (308-377)||(3176067-3176135)
chr4 (263-340)||(8705017-8705094)
chr4 (264-344)||(40830948-40831028)
chr4 (364-421)||(45214366-45214423)
chr4 (299-418)||(2244047-2244168)
chr4 (323-379)||(20109622-20109678)
chr4 (308-340)||(22471349-22471381)
chr4 (329-377)||(24929532-24929579)
chr4 (264-367)||(28615384-28615486)
chr4 (299-403)||(56249538-56249640)
[»] chr7 (59 HSPs)
chr7 (272-449)||(33678747-33678924)
chr7 (278-448)||(33601342-33601511)
chr7 (264-403)||(34035931-34036069)
chr7 (323-449)||(39967887-39968013)
chr7 (299-449)||(48470011-48470161)
chr7 (264-403)||(36517593-36517729)
chr7 (259-346)||(19302476-19302563)
chr7 (264-349)||(4970710-4970795)
chr7 (265-449)||(20526413-20526597)
chr7 (303-418)||(19022542-19022657)
chr7 (264-430)||(34744014-34744180)
chr7 (264-445)||(17944261-17944442)
chr7 (264-407)||(21568416-21568555)
chr7 (264-445)||(37064386-37064563)
chr7 (282-437)||(33601963-33602117)
chr7 (296-378)||(44989627-44989710)
chr7 (324-448)||(5947153-5947276)
chr7 (271-407)||(25670511-25670646)
chr7 (307-403)||(9050649-9050742)
chr7 (312-446)||(17248525-17248656)
chr7 (264-403)||(28691754-28691891)
chr7 (300-447)||(39907772-39907917)
chr7 (299-378)||(20526882-20526961)
chr7 (264-403)||(25596047-25596184)
chr7 (323-378)||(30496743-30496797)
chr7 (310-419)||(9038109-9038216)
chr7 (376-449)||(12110327-12110401)
chr7 (277-343)||(27863656-27863722)
chr7 (356-445)||(44821930-44822019)
chr7 (264-377)||(5947280-5947393)
chr7 (399-448)||(13960884-13960933)
chr7 (308-377)||(20553142-20553210)
chr7 (308-377)||(33894666-33894734)
chr7 (311-403)||(38499878-38499969)
chr7 (300-378)||(3308205-3308284)
chr7 (298-341)||(19214358-19214401)
chr7 (263-330)||(20234546-20234613)
chr7 (367-449)||(40252128-40252210)
chr7 (356-449)||(22283754-22283847)
chr7 (308-350)||(22387859-22387901)
chr7 (264-306)||(40252041-40252083)
chr7 (363-416)||(47130802-47130855)
chr7 (267-351)||(3836604-3836689)
chr7 (404-449)||(30180018-30180063)
chr7 (404-449)||(34083583-34083628)
chr7 (359-448)||(45338417-45338505)
chr7 (267-332)||(45338537-45338602)
chr7 (299-407)||(45593537-45593645)
chr7 (298-343)||(48140276-48140321)
chr7 (330-378)||(6226141-6226188)
chr7 (326-370)||(7241316-7241360)
chr7 (351-403)||(7244694-7244745)
chr7 (278-334)||(18765366-18765422)
chr7 (278-342)||(21196342-21196406)
chr7 (318-449)||(39279929-39280060)
chr7 (354-449)||(40688994-40689089)
chr7 (324-376)||(43219623-43219674)
chr7 (310-378)||(46082074-46082141)
chr7 (376-443)||(46280301-46280369)
[»] chr8 (62 HSPs)
chr8 (267-378)||(32840907-32841018)
chr8 (265-448)||(10758176-10758358)
chr8 (264-416)||(30251372-30251524)
chr8 (323-421)||(9956791-9956889)
chr8 (298-448)||(26771233-26771383)
chr8 (276-440)||(27028807-27028971)
chr8 (274-449)||(35534541-35534714)
chr8 (266-397)||(1057997-1058126)
chr8 (299-416)||(1930035-1930152)
chr8 (264-449)||(38602300-38602479)
chr8 (272-404)||(3536871-3537002)
chr8 (299-445)||(38648322-38648468)
chr8 (272-445)||(18133627-18133800)
chr8 (266-403)||(31716147-31716283)
chr8 (267-403)||(43717855-43717993)
chr8 (264-344)||(43045643-43045723)
chr8 (362-448)||(7918789-7918875)
chr8 (313-439)||(10120733-10120859)
chr8 (299-417)||(27754403-27754520)
chr8 (264-343)||(36963272-36963351)
chr8 (299-345)||(28763439-28763485)
chr8 (316-378)||(33808341-33808403)
chr8 (277-448)||(12976181-12976351)
chr8 (266-367)||(40859703-40859803)
chr8 (309-449)||(42215270-42215409)
chr8 (267-378)||(11376741-11376852)
chr8 (320-451)||(16825512-16825642)
chr8 (323-449)||(10114457-10114582)
chr8 (277-449)||(34849070-34849243)
chr8 (308-429)||(29168019-29168140)
chr8 (308-377)||(30918152-30918219)
chr8 (272-378)||(35643914-35644020)
chr8 (308-449)||(2482832-2482970)
chr8 (267-340)||(12496993-12497066)
chr8 (308-420)||(43504747-43504858)
chr8 (362-445)||(37353265-37353348)
chr8 (264-403)||(44236741-44236879)
chr8 (322-377)||(2458543-2458597)
chr8 (299-342)||(6882001-6882044)
chr8 (311-378)||(13459683-13459749)
chr8 (264-346)||(16162829-16162912)
chr8 (299-346)||(42043308-42043355)
chr8 (354-457)||(42215090-42215192)
chr8 (308-378)||(11569420-11569489)
chr8 (312-378)||(12851214-12851279)
chr8 (264-378)||(27492975-27493089)
chr8 (392-449)||(30627947-30628005)
chr8 (308-345)||(2487971-2488008)
chr8 (324-377)||(3254264-3254316)
chr8 (308-369)||(8629503-8629563)
chr8 (388-440)||(24558829-24558882)
chr8 (379-451)||(25930586-25930659)
chr8 (299-336)||(30151177-30151214)
chr8 (392-445)||(32975871-32975924)
chr8 (388-448)||(38036153-38036214)
chr8 (265-362)||(44792710-44792807)
chr8 (325-377)||(10383924-10383975)
chr8 (272-339)||(11952303-11952371)
chr8 (264-379)||(14280339-14280455)
chr8 (354-449)||(21653048-21653143)
chr8 (322-378)||(31751533-31751589)
chr8 (394-449)||(34770859-34770915)
[»] chr1 (86 HSPs)
chr1 (264-407)||(2295106-2295248)
chr1 (264-438)||(3233933-3234107)
chr1 (308-449)||(24915013-24915154)
chr1 (265-378)||(11941300-11941413)
chr1 (272-447)||(473133-473307)
chr1 (264-451)||(14576572-14576758)
chr1 (260-417)||(6102153-6102309)
chr1 (265-344)||(50644174-50644253)
chr1 (308-449)||(34290203-34290343)
chr1 (272-421)||(37842282-37842430)
chr1 (299-373)||(38001639-38001712)
chr1 (323-416)||(38503442-38503535)
chr1 (272-429)||(49938734-49938891)
chr1 (277-378)||(29904789-29904890)
chr1 (264-419)||(3887550-3887705)
chr1 (311-446)||(17603349-17603484)
chr1 (310-429)||(45975677-45975796)
chr1 (267-346)||(5720995-5721074)
chr1 (272-378)||(10199334-10199440)
chr1 (295-449)||(51695444-51695597)
chr1 (308-449)||(31517703-31517843)
chr1 (267-427)||(2777881-2778040)
chr1 (276-397)||(36514606-36514726)
chr1 (279-399)||(7069434-7069553)
chr1 (267-378)||(489228-489339)
chr1 (299-449)||(1432482-1432632)
chr1 (341-408)||(15784338-15784404)
chr1 (296-378)||(38480524-38480607)
chr1 (324-429)||(7136977-7137081)
chr1 (308-417)||(10744300-10744408)
chr1 (272-449)||(13809965-13810142)
chr1 (339-448)||(27820330-27820439)
chr1 (264-449)||(37631477-37631662)
chr1 (308-378)||(38170653-38170722)
chr1 (264-346)||(38247397-38247479)
chr1 (316-378)||(47498809-47498871)
chr1 (267-407)||(5741616-5741755)
chr1 (362-446)||(10809315-10809399)
chr1 (265-374)||(27146174-27146283)
chr1 (274-346)||(6557042-6557114)
chr1 (308-379)||(12287154-12287225)
chr1 (264-403)||(7941620-7941758)
chr1 (272-417)||(26779853-26779996)
chr1 (323-421)||(28689430-28689529)
chr1 (275-334)||(33204323-33204382)
chr1 (299-345)||(9572054-9572100)
chr1 (298-443)||(38018316-38018461)
chr1 (376-449)||(49888734-49888808)
chr1 (315-376)||(4549888-4549948)
chr1 (321-362)||(5894154-5894195)
chr1 (362-446)||(10799432-10799516)
chr1 (299-441)||(27976570-27976720)
chr1 (278-377)||(35925729-35925829)
chr1 (364-449)||(47432063-47432147)
chr1 (406-446)||(10808604-10808644)
chr1 (388-447)||(25006075-25006135)
chr1 (272-414)||(38116003-38116146)
chr1 (362-440)||(7472287-7472365)
chr1 (388-438)||(23445312-23445363)
chr1 (298-443)||(27970246-27970392)
chr1 (264-343)||(34795364-34795443)
chr1 (309-430)||(35590857-35590976)
chr1 (265-339)||(46504137-46504212)
chr1 (308-379)||(48536653-48536723)
chr1 (304-407)||(51929497-51929599)
chr1 (313-407)||(5709637-5709729)
chr1 (362-447)||(7218090-7218175)
chr1 (308-378)||(27820159-27820228)
chr1 (264-377)||(33723300-33723413)
chr1 (316-402)||(37473418-37473503)
chr1 (265-343)||(37617384-37617462)
chr1 (308-449)||(38578494-38578635)
chr1 (321-449)||(51688672-51688802)
chr1 (355-443)||(2294884-2294972)
chr1 (266-378)||(6659718-6659830)
chr1 (356-416)||(12564509-12564569)
chr1 (264-403)||(19389915-19390054)
chr1 (325-421)||(23902047-23902142)
chr1 (363-447)||(34952184-34952268)
chr1 (324-415)||(1509752-1509843)
chr1 (299-351)||(10233601-10233653)
chr1 (299-339)||(14332058-14332098)
chr1 (409-449)||(15477545-15477585)
chr1 (392-443)||(37295763-37295815)
chr1 (388-435)||(39596578-39596626)
chr1 (266-346)||(42575389-42575469)
[»] chr2 (79 HSPs)
chr2 (264-399)||(7928216-7928351)
chr2 (299-445)||(18066099-18066245)
chr2 (300-402)||(16451133-16451234)
chr2 (285-449)||(43279466-43279630)
chr2 (278-445)||(1625871-1626038)
chr2 (264-449)||(12313091-12313276)
chr2 (264-403)||(4606939-4607077)
chr2 (277-449)||(12464404-12464576)
chr2 (277-421)||(750666-750809)
chr2 (328-446)||(40279167-40279285)
chr2 (265-447)||(41812011-41812191)
chr2 (264-377)||(28677577-28677690)
chr2 (264-447)||(2142622-2142806)
chr2 (278-449)||(15757590-15757762)
chr2 (321-441)||(26626848-26626968)
chr2 (303-403)||(41293120-41293219)
chr2 (302-449)||(41851502-41851649)
chr2 (267-351)||(42419858-42419942)
chr2 (265-360)||(449903-449998)
chr2 (265-449)||(11513865-11514047)
chr2 (299-378)||(40682348-40682427)
chr2 (272-378)||(36534806-36534912)
chr2 (310-403)||(26143604-26143696)
chr2 (265-346)||(30331821-30331902)
chr2 (299-407)||(7035520-7035627)
chr2 (328-415)||(40279268-40279355)
chr2 (328-415)||(40279338-40279425)
chr2 (298-449)||(42457915-42458066)
chr2 (308-449)||(43199747-43199896)
chr2 (272-458)||(2416271-2416457)
chr2 (321-451)||(8017399-8017528)
chr2 (299-449)||(36114386-36114536)
chr2 (300-378)||(13325608-13325686)
chr2 (264-378)||(15305712-15305826)
chr2 (264-346)||(27317449-27317531)
chr2 (312-449)||(29316742-29316878)
chr2 (264-346)||(42659129-42659211)
chr2 (280-449)||(45229479-45229647)
chr2 (324-377)||(1647275-1647327)
chr2 (265-346)||(24100998-24101079)
chr2 (267-430)||(29628663-29628827)
chr2 (267-441)||(33319737-33319907)
chr2 (322-403)||(35378993-35379072)
chr2 (329-436)||(680483-680589)
chr2 (267-339)||(1633421-1633493)
chr2 (264-344)||(18179021-18179101)
chr2 (298-449)||(32592554-32592704)
chr2 (308-379)||(5902512-5902582)
chr2 (267-378)||(9174853-9174964)
chr2 (324-449)||(41407268-41407394)
chr2 (264-378)||(43529776-43529890)
chr2 (265-418)||(20952353-20952506)
chr2 (308-374)||(40158760-40158825)
chr2 (308-345)||(32837393-32837430)
chr2 (404-449)||(36114581-36114626)
chr2 (322-378)||(35378509-35378564)
chr2 (322-378)||(43570452-43570507)
chr2 (354-441)||(43911007-43911094)
chr2 (308-375)||(787373-787439)
chr2 (356-419)||(26372747-26372809)
chr2 (276-449)||(33931500-33931673)
chr2 (264-458)||(44438759-44438951)
chr2 (355-401)||(1893290-1893335)
chr2 (281-378)||(5365514-5365609)
chr2 (272-346)||(31561668-31561742)
chr2 (388-449)||(33941876-33941938)
chr2 (376-449)||(39073718-39073792)
chr2 (404-446)||(42907329-42907371)
chr2 (395-448)||(44439408-44439462)
chr2 (355-449)||(7103491-7103586)
chr2 (309-378)||(10567095-10567163)
chr2 (265-377)||(14316064-14316176)
chr2 (357-421)||(42621386-42621450)
chr2 (361-421)||(44590029-44590089)
chr2 (313-378)||(44606078-44606142)
chr2 (264-344)||(31744370-31744450)
chr2 (273-344)||(31982370-31982442)
chr2 (310-346)||(32106764-32106800)
chr2 (326-378)||(43717117-43717168)
[»] chr6 (42 HSPs)
chr6 (306-449)||(2735036-2735179)
chr6 (323-449)||(9093533-9093659)
chr6 (264-378)||(848027-848140)
chr6 (299-447)||(20368134-20368281)
chr6 (298-403)||(31813175-31813279)
chr6 (278-416)||(2455259-2455397)
chr6 (324-451)||(31624049-31624181)
chr6 (278-378)||(2455029-2455126)
chr6 (265-449)||(837135-837319)
chr6 (264-346)||(103500-103582)
chr6 (300-378)||(9912145-9912223)
chr6 (315-421)||(10616683-10616787)
chr6 (332-445)||(34430447-34430560)
chr6 (264-378)||(34882339-34882453)
chr6 (265-346)||(4163223-4163304)
chr6 (265-346)||(4224844-4224925)
chr6 (308-447)||(769108-769245)
chr6 (310-417)||(13907584-13907691)
chr6 (388-451)||(24626260-24626324)
chr6 (264-404)||(30926533-30926671)
chr6 (264-347)||(6538583-6538666)
chr6 (298-368)||(9559374-9559444)
chr6 (277-362)||(8552677-8552762)
chr6 (362-449)||(415271-415358)
chr6 (394-449)||(4006681-4006737)
chr6 (263-351)||(24982770-24982858)
chr6 (330-421)||(34910393-34910484)
chr6 (388-446)||(6909913-6909972)
chr6 (264-377)||(2460069-2460182)
chr6 (277-378)||(35070398-35070499)
chr6 (265-345)||(20861617-20861698)
chr6 (404-449)||(29296351-29296396)
chr6 (301-346)||(30536573-30536618)
chr6 (324-376)||(696642-696693)
chr6 (263-311)||(835178-835226)
chr6 (329-377)||(2027390-2027437)
chr6 (268-339)||(6742887-6742959)
chr6 (310-449)||(9559503-9559644)
chr6 (299-339)||(10645338-10645378)
chr6 (267-346)||(26559160-26559240)
chr6 (405-449)||(28621169-28621213)
chr6 (310-346)||(29754063-29754099)
[»] scaffold0024 (1 HSPs)
scaffold0024 (310-449)||(27543-27681)
[»] scaffold0057 (2 HSPs)
scaffold0057 (298-351)||(24686-24739)
scaffold0057 (272-334)||(44115-44177)
[»] scaffold0221 (1 HSPs)
scaffold0221 (277-403)||(22245-22370)


Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 137 - 457
Target Start/End: Original strand, 1464811 - 1465130
Alignment:
Q  137 ttaagataaaaggagtaatattcgtgagaaaaaa-tgataagctgtaacttttaagctacatgctgctttaagtagcttatcaaaaagtagattaaccta 235  Q
    |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  1464811 ttaagataaaaggagtaaaattcgtgggaaaaaaatgataagctataacttttaaggtacatgctgcttaaa-tagcttatcaaaaagtagattaaccta 1464909  T
Q  236 gtnnnnnnnnctataagctcgcgagaaactgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaa 335  Q
    ||        ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1464910 gtaaaaaaaactaaaagctcgcgagaaactgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaa 1465009  T
Q  336 aacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgattt 435  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1465010 aacagcttatggcattgctcataagttgttttcagctta-ttttcacaagtcctccaagatagcttataaaataacttatagcttacacaaaagcgattt 1465108  T
Q  436 aactttattttatcctatgcta 457  Q
    ||||||||||||||||||||||    
T  1465109 aactttattttatcctatgcta 1465130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 449
Target Start/End: Original strand, 16937801 - 16937986
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || |||||||||||| ||||||| |||| || ||||||||||||||||||||||| ||    ||||||| |     
T  16937801 ctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagctt 16937900  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||| |||||  |||| |||||| ||||| ||| ||||||||||||||| || |||||||| ||||||| ||||||||||    
T  16937901 ttttcagctta-ttttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaacgttattttatc 16937986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 273 - 449
Target Start/End: Complemental strand, 12425716 - 12425538
Alignment:
Q  273 ttgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttat--gaaaacagcttatggcattgctcataagttgttttcag 370  Q
    |||||||||||||||||| || ||  |||||||| |||||||||||| ||||||||||||  ||||||| | ||   |||||   ||||||||||||||     
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaaacattgtcaataagttgttttcaa 12425617  T
Q  371 cttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||| || |||| |||||||||||||| | |||||| ||||||||||| || ||||| ||||||||||||||||||    
T  12425616 cttatttt-cataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatc 12425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 272 - 458
Target Start/End: Original strand, 9202674 - 9202860
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    ||||||||||||||||||| || || ||||||||| ||| ||||| ||  ||| |||| ||| |||||||||||| ||||| ||||||| ||||| ||||    
T  9202674 attgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagc 9202773  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcctatgctac 458  Q
    ||| |||||| |||| || ||||||| ||||| |||||| ||||| ||||| |  ||||| |||||||||||||||||| | ||||||    
T  9202774 tta-ttttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctac 9202860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 1464728 - 1464825
Alignment:
Q  17 aactatctgattgaaattgctgtgtttcataaaatttattgttgaaatgtcatggaaaaatatgtataannnnnnnctttctttcaattaagataaaagg 116  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||    
T  1464728 aactatctgattgaatttgccgtgtttgataaaatttattgttgaaatgacatggaaaaatatgtataatttt----tttctttcaattaagataaaagg 1464823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 302 - 437
Target Start/End: Original strand, 16457935 - 16458070
Alignment:
Q  302 aagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctt 401  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| || |  ||||||| | ||||||| ||| ||||||||||| ||||||  |||||     
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagttta-ttttcacaagttctccaatttagctc 16458033  T
Q  402 at-aaaacaacttatagcttacacaaaaacgatttaa 437  Q
    || ||||||||||||||| || |||||||| ||||||    
T  16458034 ataaaaacaacttatagcatatacaaaaacaatttaa 16458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 321 - 445
Target Start/End: Complemental strand, 39105559 - 39105435
Alignment:
Q  321 gggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagct 419  Q
    ||||||| |||||||||||||||||| ||||| ||||||| | |||| |||||| |||||| |||| |||||||||||||||| ||||||  ||||||||    
T  39105559 gggagaatttatgaaaacagcttatgacattgttcataagctatttttagctta-ttttcataagttctccaagatagcttatgaaaacagattatagct 39105461  T
Q  420 tacacaaaaacgatttaactttattt 445  Q
    || || ||||| ||||||||| ||||    
T  39105460 tatacgaaaacaatttaacttcattt 39105435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 449
Target Start/End: Complemental strand, 29925978 - 29925808
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||| ||||| || |||||| ||||| |||||||| ||| |||||||||||||||||||||||||| || || ||||  ||| |||||| |||| ||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaactta-tt 29925881  T
Q  378 ttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||| |||||| |||||||||  ||||||||||||||  | ||| |||| |||||||  |||||||||    
T  29925880 ttcataagttctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaacgctattttatc 29925808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 449
Target Start/End: Complemental strand, 7674796 - 7674615
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| |||| |||||||||||||| || |   | |||||| |||||||||| | || |||||||||| ||||| |||||| ||| | | ||||| |||||    
T  7674796 tttggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgacat-gtttataaggtgttt 7674698  T
Q  367 tcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||| ||||| | |||||||||||||||| ||||||  |||| ||||| |  ||||| |||||| |||||||||||    
T  7674697 tcagcttatttt-cacaaattctccaagatagcttatgaaaacattttatggcttataagaaaacaatttaaatttattttatc 7674615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 403
Target Start/End: Original strand, 7705916 - 7706054
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||||||||||||||| || || |||||||||||| |||||  || || |||||||||||||||||||||||||| || |  |||   | |     
T  7705916 ctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgctt 7706015  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||| ||||| ||||||||||| |||||| |||||||||    
T  7706016 ttttcggctta-ttttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 7808645 - 7808543
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||||||||| |||  || |||||||| ||| | |||||||||| |||||| |||||||||| |||||||  ||||| ||||||| ||||||||||||||    
T  7808645 acttatttgaacttttctactagcatatgttatttgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttat 7808546  T
Q  376 ttt 378  Q
    |||    
T  7808545 ttt 7808543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 280 - 420
Target Start/End: Complemental strand, 7985105 - 7984965
Alignment:
Q  280 atttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    ||||||| ||| || || ||||||| | ||||||||| || |||||| |||| ||||||||||| || | ||| ||||||| ||||||||||||| ||||    
T  7985105 atttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcagctta-tttt 7985007  T
Q  380 cacaagtcctccaagatagcttat-aaaacaacttatagctt 420  Q
    || || | |||||||||||||||| |||| | ||||||||||    
T  7985006 cataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 3520723 - 3520647
Alignment:
Q  270 gaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| |||||||||||| | || |||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  3520723 gaattggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatg 3520647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 369
Target Start/End: Complemental strand, 39248246 - 39248146
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| || ||||||||||||||||     ||||||||||| |||||||||||| |||||||||||| ||||||||||||| | ||| ||||||| ||    
T  39248246 ctgtttggatcgacttatttgagcttat----tagcataagttttgtgagactgtttgggagaacttataaaaacagcttatgac-ttgttcataagctg 39248152  T
Q  364 ttttca 369  Q
    ||||||    
T  39248151 ttttca 39248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 2568762 - 2568625
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaaca 409  Q
    |||||||||  | ||||||||||||||||||||||| || |  ||||||||| |||| |||||| ||||||  ||  ||||| |||||||||| ||||||    
T  2568762 gagactgtttagaagaacttatgaaaacagcttatgaca-tattcataagttatttttagctta-ttttcattagctctccatgatagcttatgaaaaca 2568665  T
Q  410 acttatagcttacac-aaaaacgatttaactttattttat 448  Q
    |||||||||||| || |||||| |||||||||| ||||||    
T  2568664 acttatagcttatacgaaaaacaatttaactttgttttat 2568625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 449
Target Start/End: Complemental strand, 10640105 - 10639920
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||  |||||||||| ||| || ||  |||||||| ||||| | |||| |||||||||||||||||||||||||| ||||  ||||||| |     
T  10640105 ctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataagctt 10640006  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||  |||||| |||||| |||| |||||| |||| ||||  |||||||| ||  | || |||||||| |||||| || ||||||||    
T  10640005 tttctagctta-ttttcataagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaatttaattttatc 10639920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 41534589 - 41534437
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||||| | || ||  ||||| || ||||||| |||| |||| ||||| ||||||||||||||| |   | ||||||| |||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgac---gttcataagctgt 41534493  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctt 420  Q
    |||||| |||||| |  ||||| ||| || ||||||||| |||||||||||||||||    
T  41534492 tttcagattatttct-tcaagttctcaaaaatagcttatgaaaacaacttatagctt 41534437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 499650 - 499762
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||| ||||||||||||||||||| || ||  ||||||  | ||| || ||||| |||||||||||||||||||||||||| || || | | ||||||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgaca-tgttaacaagttg 499748  T
Q  364 ttttcagcttattt 377  Q
    ||||||||||||||    
T  499749 ttttcagcttattt 499762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 448
Target Start/End: Complemental strand, 11700301 - 11700130
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    |||||||||||||| |  || ||||||||| ||||||||||||    |||||||||| ||||| |||||| ||||| |||||| ||| ||||| |||| |    
T  11700301 cttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataaattg-tttcatctta-t 11700204  T
Q  377 tttcacaagtcctccaagatagcttat-aaaacaacttat-agcttacacaaaaacgatttaactttattttat 448  Q
    ||||| |||| ||||| |||||| ||| |||||||||||| |||||| || ||||| |  |||||||| |||||    
T  11700203 tttcataagttctccacgatagcatatcaaaacaacttataagcttatacgaaaacaacataactttaatttat 11700130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 445
Target Start/End: Original strand, 34736446 - 34736626
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||||||| ||  |  |||||||| |||||||| ||| |||||||||| |||| |||||| ||| || || | ||||| |||    
T  34736446 tgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaacttttgaacacagctaatgaca-tgtttataagctgt 34736544  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    || ||||||  |||| | || | ||||||||||||| || | ||||  |||||||||| |||||||  ||||| ||||||||    
T  34736545 ttacagctttgtttttataaattctccaagatagctaatgataacagtttatagcttatacaaaaataatttagctttattt 34736626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 449
Target Start/End: Complemental strand, 40426908 - 40426732
Alignment:
Q  273 ttgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagct 372  Q
    |||||||||||||||||| ||  |  ||||| || |||||||||||| ||| |  ||||||||||||||||||| ||||  ||||||| | |||| ||||    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagct 40426809  T
Q  373 tatttttcacaagtcctccaagatagctta-taaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || |||||  |||| |||||||| ||||||   ||||| |||| |||  | |||||||| ||||| ||||||||||||    
T  40426808 ta-ttttcgtaagttctccaagacagcttacggaaacagcttacagcaaatacaaaaacaatttagctttattttatc 40426732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 423
Target Start/End: Complemental strand, 41419470 - 41419313
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||||| | || ||  ||||| || ||||||| |||| |||| ||||| ||||||||||||||| ||||| |||| || | |    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctat 41419371  T
Q  365 tttcagcttatttttca-caagtcctccaagatagcttat-aaaacaacttatagcttaca 423  Q
    |||||| |||  |||||  |||| ||| || ||||||||| ||||||||||||||||||||    
T  41419370 tttcagatta--tttcattaagt-ctcaaaaatagcttatgaaaacaacttatagcttaca 41419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 445
Target Start/End: Original strand, 6587076 - 6587206
Alignment:
Q  314 actgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaact 412  Q
    |||||| || ||||||||  ||||||||||||| ||  | ||||||| ||||| ||||||||||| ||||||| |||||  ||||||||| |||||||||    
T  6587076 actgtttggaagaacttaaaaaaacagcttatgacag-gttcataagctgtttacagcttatttt-cacaagttctccactatagcttatgaaaacaact 6587173  T
Q  413 tatagcttacacaaaaacgatttaactttattt 445  Q
    ||||||||| || ||||| ||| || |||||||    
T  6587174 tatagcttatacgaaaacaattgaagtttattt 6587206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 12857660 - 12857765
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||| ||||| ||||||| |||||||||||||||||| |||||| || |  ||| ||  | ||||||||||| |||||| |||| |||||| ||||||    
T  12857660 taagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcacaaccttttttcagctta-ttttcataagttctccaatatagct 12857758  T
Q  401 tataaaa 407  Q
    |||||||    
T  12857759 tataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 10272442 - 10272534
Alignment:
Q  357 taagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||||||||| || ||   ||||||||| |||||| |||||||||||||||||| || ||||| |||| |||| ||||||||    
T  10272442 taagttgttttcagcttatttt-cataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatc 10272534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 32941622 - 32941545
Alignment:
Q  264 ctgtttgaattgacttatttgagctt-agcttctagcataagttctgtgagactgttcgggagaacttatgaaaacag 340  Q
    ||||||| ||||||||||| |||||| | || ||  ||||||||||||||||| ||| ||||||||||||||||||||    
T  32941622 ctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacag 32941545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 39594958 - 39594845
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||||||| || |   |||||||| ||| ||| |||| |||| ||||||||||||||||| | |  | || |  ||||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttattaagttgt 39594859  T
Q  365 tttcagcttatttt 378  Q
    ||||||||||||||    
T  39594858 tttcagcttatttt 39594845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 43301029 - 43300877
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| |||| ||||||||||||||  |  | ||||||||| | |||||||||| ||||||| |||| |||||||| |||| ||||    |||||        
T  43301029 tgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatg 43300930  T
Q  365 tttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatag 417  Q
    |||||||||| |||||| |||| |||||||||||||||  ||||||||||||||    
T  43300929 tttcagctta-ttttcataagttctccaagatagcttacaaaaacaacttatag 43300877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 1773024 - 1773101
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    ||||||| |||| ||||||| |||||| || ||  |||||||| |||||||||||  |||||||||||||||||||||||    
T  1773024 ctgtttggattggcttattttagcttatctacttccataagttttgtgagactgt--gggagaacttatgaaaacagctt 1773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 429
Target Start/End: Complemental strand, 7907987 - 7907868
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    |||||||||| || |||||||||||||||| | ||  | | |  |||||||||||||||||||||  ||||| |||  |||||||| ||||||| |||||    
T  7907987 tgagactgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctta-atttcataagctctccaagacagcttatcaaaac 7907889  T
Q  409 aacttatagcttacacaaaaa 429  Q
    |||||||| |||| |||||||    
T  7907888 aacttataacttatacaaaaa 7907868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 430
Target Start/End: Complemental strand, 17368768 - 17368662
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||||||| |||||| ||| | ||||| |  |||||||||||||||  || ||   |||||||||||||||| |||||||||||||| |||    
T  17368768 gagaacttatgaaaacaacttatgacat-gttcatatgcagttttcagcttatttc-cataacctctccaagatagcttatgaaaacaacttatagatta 17368671  T
Q  422 cacaaaaac 430  Q
    |||||||||    
T  17368670 cacaaaaac 17368662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 344
Target Start/End: Complemental strand, 9107240 - 9107162
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||| ||||||||||||||| ||| ||  |  |||||||| ||||||| |||| ||||||||| ||||||||||||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctta 9107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 407
Target Start/End: Original strand, 12857293 - 12857398
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||| ||||| ||| ||| |||||||||||||||||| |||||| || |  ||| ||| | ||||||||||||||||   |||| |||||| ||||||    
T  12857293 taagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttttttcagcttattttt-gtaagttctccaatatagct 12857391  T
Q  401 tataaaa 407  Q
    |||||||    
T  12857392 tataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 32372677 - 32372591
Alignment:
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||| | | || |||||||||| ||| | |||||| |||||||| || |||||||| ||| ||||||||||||||    
T  32372677 ttttcagcttattttttatatgttctccaagataacttgtgaaaacagcttatagcatatacaaaaacaattcaactttattttatc 32372591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 41981652 - 41981698
Alignment:
Q  295 ctagcataagttctgtgagactgttcgggagaacttatgaaaacagc 341  Q
    ||||||| |||| |||||||||||| |||||||||||||||||||||    
T  41981652 ctagcattagttttgtgagactgtttgggagaacttatgaaaacagc 41981698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 284 - 443
Target Start/End: Complemental strand, 7319539 - 7319379
Alignment:
Q  284 gagcttagcttctagcataagttctgtgag-actgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcac 382  Q
    ||||||| || |||||||||||| |||||| | |||| | ||||||||||| ||| ||  ||   |||||   |||||||| ||||||||||||||| |     
T  7319539 gagcttatctactagcataagttttgtgaggaatgtttgagagaacttatggaaatagtgtaaaacattgtctataagttgctttcagcttattttt-at 7319441  T
Q  383 aagtcctccaagatagctta-taaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    |||| |||||||||||||||  ||||||  |||||||||| |  ||||| ||||||||||||    
T  7319440 aagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 449
Target Start/End: Original strand, 32703292 - 32703377
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||||| | || | |||| ||||||||||| ||||||||||||||| |||| ||| |  ||||||||||||||||||    
T  32703292 tgttttcagcttattttt-ataaattctcctagatagcttatgaaaacaacttatagcatacagaaata--atttaactttattttatc 32703377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 266 - 350
Target Start/End: Original strand, 38033947 - 38034032
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcat 350  Q
    |||| |||||||||||||||||||  || || |||||||  | |||||||||||| || |||| |||| |||||||||||||||||    
T  38033947 gtttaaattgacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacagcttatggcat 38034032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 417
Target Start/End: Original strand, 38104820 - 38104927
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||| |||||| |||||||||||  |||||||  |||| | ||||| ||||||||||||||||||| ||| || |||  ||| |||||||||||| |||    
T  38104820 tgtgacactgtttgggagaacttacaaaaacaggctatgac-ttgcttataagttgttttcagctta-tttccataagctctctaagatagcttatgaaa 38104917  T
Q  408 caacttatag 417  Q
    || |||||||    
T  38104918 cagcttatag 38104927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 4014432 - 4014527
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| ||||||||||||| |||||| |||| |||||||||||||||| |||||| |||||   ||   ||||||| || |||||||||||||||    
T  4014432 tcataagctgttttcagctta-ttttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatc 4014527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 11064810 - 11064730
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattg 352  Q
    ||||| ||||||||| ||| || | | |||||||| ||||||| |||| | ||||||||||||||| |||||||| |||||    
T  11064810 attgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgacattg 11064730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaa 337  Q
    |||||||||||||| || ||  |||||| | |||||||||||| |||||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 346
Target Start/End: Complemental strand, 32849327 - 32849247
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||||||||||| |||||| || ||| ||||||  || ||||| ||||| ||||||||||||||||| | ||||||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaacttatg 32849247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 446
Target Start/End: Original strand, 41957460 - 41957551
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||||||| |||| |||||| |||| ||| | |||||||||| |||||| |||||| ||||||  ||||| ||||||||| |||||    
T  41957460 cataagttgttttcatctta-ttttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 375
Target Start/End: Complemental strand, 42228156 - 42228080
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    ||||||||  |||||| |||| ||||||||||||| |||||||||| | ||||| |  ||||||||||| |||||||    
T  42228156 cataagtttcgtgagattgtttgggagaacttatggaaacagcttaagacattgttagtaagttgtttttagcttat 42228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 42646944 - 42646880
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    ||||||||| | |||| |||||| ||||||||||| |||||||| ||||||||| ||||||||||    
T  42646944 ctccaagatcgtttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatcct 42646880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 7318965 - 7319064
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||| | |||||||||  ||||||||||| ||||||| ||||    ||||  ||||||||||| |||||||| |||||| |||| |||||||||||||    
T  7318965 taagttgtatgagactgt--gggagaacttaggaaaacaacttaaactattgtccataagttgttctcagctta-ttttcataagttctccaagatagct 7319061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 12459963 - 12460033
Alignment:
Q  307 ctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||| |||||||| |||||||||| |||||| || || ||||| ||||||||  |||||||||    
T  12459963 ctgtgagactgtttgggagaacctatgaaaacaacttatgaca-tgttcatatgttgtttttggcttatttt 12460033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 42583260 - 42583363
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||||||||||||| |||||| |  |  ||  ||||| || || ||| ||||| ||||||||| |||||||||| ||||  ||||| ||||||||||    
T  42583260 ctgtttgaattgacttacttgagcgtgtccactgacataaattttgcgaggctgtttgggagaactaatgaaaacagtttataacattgttcataagttg 42583359  T
Q  364 tttt 367  Q
    ||||    
T  42583360 tttt 42583363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 706555 - 706501
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||||||| || ||||| ||||| ||||||| | |||||||||||||||    
T  706555 agaacttatgaaaatagtttatgacattgttcataagctattttcagcttatttt 706501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 6521230 - 6521156
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaac 338  Q
    ||||||| ||||||||||| ||||| | || ||  |||| ||| ||||||| |||| ||||||||||||||||||    
T  6521230 ctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaac 6521156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 8334663 - 8334609
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||||||| |||||||| |||   |||||| ||||||||||||||||||    
T  8334663 agaacttatgaaaatagcttatgacatatttcataaattgttttcagcttatttt 8334609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 13697767 - 13697828
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttata 416  Q
    ||||||||| |||||| |||||||| || || | |||||| ||||||||||||||||||||||    
T  13697767 tcataagtttttttcaacttatttt-cataacttctccaacatagcttataaaacaacttata 13697828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 449
Target Start/End: Original strand, 34102243 - 34102417
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    ||||||||||||||| ||  | ||||||||| ||||| |||||| ||| ||| ||||||||| |||||| | || |  |||||| || |||   |  |      
T  34102243 acttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttcataacttttttattgacttg 34102342  T
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||  ||| |||||| || |||||| ||||||||||||||| || |||||||| | ||||| ||||||||||    
T  34102343 ttttcatgagttctccaacatggcttataaaaacaacttatagcatatacaaaaacaaattaacattattttatc 34102417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 38728510 - 38728441
Alignment:
Q  307 ctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||| || |||| |||||| |||||||||| |||||||| ||| |||| |||| ||||||||||||||||    
T  38728510 ctgtgtgattgtttgggagagcttatgaaaatagcttatgacat-gctcctaagctgttttcagcttattt 38728441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 42100463 - 42100349
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| || | |||||||||||||| ||  | |||||| || |||| ||||||  | |||||||| |||||| |||||||| ||| | ||| ||| ||    
T  42100463 ctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaaggtg 42100364  T
Q  364 ttttcagcttatttt 378  Q
    |||||| ||||||||    
T  42100363 ttttcatcttatttt 42100349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 8651271 - 8651352
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||| |||| |||||||||||||| ||||||||||||   || |||||| | ||||| ||| |||||| |||||||||||    
T  8651271 tgtttggattgccttatttgagcttatcttctagcataaacactcgtgagagtattcggaagagcttatggaaacagcttat 8651352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 379
Target Start/End: Complemental strand, 15246971 - 15246870
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| || ||  |||||||| | | ||| |||| |||||||||||||||| || |||||| |||   ||||||||| ||| || |||||||    
T  15246971 ttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttattt 15246872  T
Q  378 tt 379  Q
    ||    
T  15246871 tt 15246870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 378
Target Start/End: Original strand, 17258859 - 17258915
Alignment:
Q  321 gggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||| |||||||| |||||||| ||| | ||||||| |||||||||||||||||    
T  17258859 gggagaacctatgaaaatagcttatgacat-gttcataagctgttttcagcttatttt 17258915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 347
Target Start/End: Original strand, 24030144 - 24030177
Alignment:
Q  314 actgttcgggagaacttatgaaaacagcttatgg 347  Q
    |||||| |||||||||||||||||||||||||||    
T  24030144 actgtttgggagaacttatgaaaacagcttatgg 24030177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 445
Target Start/End: Complemental strand, 25461209 - 25461062
Alignment:
Q  297 agcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagat 396  Q
    ||||||||||| |||| |||||| || ||||||| || || |||||||||||| |  ||||||    ||||||||||||||| ||  ||| |||||| |     
T  25461209 agcataagttc-gtgatactgtttggtagaacttttggaatcagcttatggcaattttcataaacgtttttcagcttatttt-catcagttctccaatag 25461112  T
Q  397 agcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||||| ||||||||||||| | || |||||||| ||  ||||||||||    
T  25461111 agcttatgaaaacaacttataacatatacaaaaacaatacaactttattt 25461062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 34205265 - 34205204
Alignment:
Q  391 caagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    ||||||||||||| |||||||||||||||||| | |||||  |||| |||||| ||||||||    
T  34205265 caagatagcttatgaaaacaacttatagcttatataaaaataatttgactttactttatcct 34205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 40452337 - 40452292
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    ||||||| |||||||||||| | ||||||| |||||||||||||||    
T  40452337 ataagttgtgtgagactgtttgagagaactgatgaaaacagcttat 40452292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 443964 - 443908
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||  ||| |||||||    
T  443964 ctccaagatagcttatgaaaacatcttatagcttatacaaaaactgtttgactttat 443908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 8089371 - 8089319
Alignment:
Q  327 acttatgaaaacagcttatggcat-tgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||||| |||| ||| |||||||||  |||||||||||||||||    
T  8089371 acttatgaaaacagcgtatgacatgtgctcataatctgttttcagcttatttt 8089319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 407
Target Start/End: Complemental strand, 37954791 - 37954696
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||||||||||||||  ||||||||||||||||||  | |  |||| || | |||||| |||| |||||| | || |||||| |||||||||||||    
T  37954791 gagactgttcgggagagtttatgaaaacagcttatgaaaattttcattagcttttttcaactta-ttttcatatgttctccaatatagcttataaaa 37954696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 39154960 - 39155004
Alignment:
Q  302 aagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||| |||||||| ||| ||||||| ||||||||||||||||||    
T  39154960 aagttttgtgagacagtttgggagaagttatgaaaacagcttatg 39155004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 41535494 - 41535422
Alignment:
Q  303 agttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||| ||||| || ||| ||||||||||||||||||| |||||| ||||| || || | ||||||| ||||||    
T  41535494 agttttgtgaaacagtttgggagaacttatgaaaacaacttatgacattgttcgtacgatgttttccgcttat 41535422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 267 - 446
Target Start/End: Complemental strand, 21367816 - 21367637
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| |||| |||||||||| ||| || | |||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||| ||| ||| |||||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttt 21367717  T
Q  367 tcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    |||||||| |||||| |||| |||||||||||||||| |||||||||||||  ||| || ||||| |||||||||||||||    
T  21367716 tcagctta-ttttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 584196 - 584013
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||||||||||  |||||| |||||||||||||||| |||| |  ||||| |||  |    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttct 584097  T
Q  366 ttcagcttatttttcacaagtcctccaagatagcttataaaac-aacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || ||||||  ||||| |||| || ||||||||||||| |||| |||||||||| |  |||||||| ||||||||||||||||||    
T  584096 ttaagctta-atttcataagttcttcaagatagcttatgaaactaacttatagcatgaacaaaaacaatttaactttattttatc 584013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 266 - 421
Target Start/End: Original strand, 24085258 - 24085413
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| |||| |||||||||||||| || |  ||||||||| |||||||||| |  |||||||||||||||||||||||||| | || ||||| | ||||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgtt 24085357  T
Q  366 ttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatagctta 421  Q
    ||||||||| ||||||||||| |||||||||||||||  ||||||| ||||||||||    
T  24085358 ttcagctta-ttttcacaagttctccaagatagcttacaaaaacaaattatagctta 24085413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 34610725 - 34610909
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| || |||||||||||||||| || ||  |||||||| |||   ||| || |||||||||||||||||| ||||||| ||||| |||||||| ||    
T  34610725 tgtttgtatggacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggt 34610824  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||| | |||||| |||| | |||||||||||||| ||| ||||||||| |||  |||||||  ||||||||| ||||||||    
T  34610825 tttcagctga-ttttcataagttcgccaagatagcttatgaaagcaacttataacttgtacaaaaataatttaacttcattttatc 34610909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 442
Target Start/End: Original strand, 402460 - 402638
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||  ||||| |||||||| ||| |  ||| |||||||| ||  |||||||| |||||||| ||||||||||||||||| ||||| ||||||| ||    
T  402460 ctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataagctg 402559  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaacttta 442  Q
    |||||||||||  |||||||||| || |||||||| |||| |||||| |||||| |||| || ||||| |||||| ||||    
T  402560 ttttcagctta-atttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaatttaaattta 402638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 278 - 439
Target Start/End: Original strand, 46886624 - 46886785
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| || || |||||| || || ||||||||| ||| || || |||||||||||||||||||||| || |||||| | ||||| ||| ||    
T  46886624 ttatttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatggcattgttcgtaagttatgttcaggtta-tt 46886722  T
Q  378 ttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaact 439  Q
    |||| |||| |||||||||||||||| |||||| ||||||||| | |||||||  ||||||||    
T  46886723 ttcaaaagttctccaagatagcttatgaaaacagcttatagctcatacaaaaataatttaact 46886785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 444
Target Start/End: Complemental strand, 39980881 - 39980701
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| ||| |||||||||| || |||||||||||| ||||||||||||   |||||||||||||||||||||||| |     ||||||| |     
T  39980881 ctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagctt 39980782  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatt 444  Q
    |||||| |||| |||||| |||| |||||| ||||||||| ||||||||||||||| |   ||||||| ||||||| |||||    
T  39980781 ttttcaactta-ttttcataagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaatttaacgttatt 39980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 299 - 446
Target Start/End: Complemental strand, 20257653 - 20257505
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    ||||| || |||||||||||| |||||||||||||||| ||||| ||| || |  ||||||||| |||  | ||||||||||| |||  |||||| ||||    
T  20257653 cataaattttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttcataagttttttaaaacttatttttcataagctctccaatatag 20257554  T
Q  399 ctt-ataaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||| | ||||||||||||||| || |||||||| |||||||||||||||    
T  20257553 cttcaaaaaacaacttatagcatatacaaaaacaatttaactttatttt 20257505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 449
Target Start/End: Complemental strand, 30444029 - 30443860
Alignment:
Q  280 atttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    ||||||||||| || || |||||| ||  ||||||||||| || ||| ||||||||||||||||||| || |  ||| ||| | ||||||||||| ||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagctta-tttt 30443931  T
Q  380 cacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || |||| |||||| |||| |||| |||||| |||||||| || |||||| | ||||||||| ||||||||    
T  30443930 cataagttctccaatatagtttataaaaacagcttatagcatatacaaaagcaatttaacttcattttatc 30443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 265 - 440
Target Start/End: Complemental strand, 20880627 - 20880452
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| |||| |||||||||||||| || || |||||||||   | ||||| || |||||||| ||||||||||||||||| || |  ||||||| | |    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
    ||| |||||| |||||| |||| |||||| ||||||| | ||||||  ||||||| || |||||||| |||||||||    
T  20880527 tttgagctta-ttttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaactt 20880452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 270 - 421
Target Start/End: Original strand, 39602135 - 39602285
Alignment:
Q  270 gaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttca 369  Q
    |||||| ||||||||||||||||| || |||| |||| |||||| || || || ||| |||||||| |||||||||| || || |||||| |||||||||    
T  39602135 gaattggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgaca-tgttcataaattgttttca 39602233  T
Q  370 gcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
     |||| |||||| |||| ||| |||||||||||| |||||| |||||| ||||    
T  39602234 actta-ttttcataagttctcaaagatagcttatgaaaacagcttataactta 39602285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 449
Target Start/End: Complemental strand, 31403503 - 31403325
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcag 370  Q
    ||||||||| ||||||||| || ||| ||||||| || |  ||||| || |||||||||||||| ||||| ||||  ||||| ||||||||||||| |||    
T  31403503 attgacttacttgagcttatctactaacataagtacttgcaagactatttgggagaacttatgagaacagtttataacattgttcataagttgtttacag 31403404  T
Q  371 cttatttttcacaagtcctccaagatagctta-taaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||||||| || ||||||||||||  |  |||||||||| || |||| || |||||  |||||||| ||||||||    
T  31403403 ctta-ttttcacaggttctccaagatagccaacgaaaacaacttgtatcttatacgaaaacattttaacttcattttatc 31403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 449
Target Start/End: Original strand, 25447163 - 25447347
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||||||||||||| ||| || ||  |||||||| |||||||||||| |  ||||| || | || ||| ||||| ||||| ||| ||| ||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttgcaagaacatacggaagcagtttatgccattgttcacaagctg 25447262  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||| ||| ||| |||   | ||||||||||||| ||||||  |||||||||| |||||||| |||||| |||||||||||    
T  25447263 ttttcagctt-tttctcataagaaat-caagatagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatc 25447347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 26878352 - 26878238
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||||||| |||||| ||||||| || ||  ||||||||  |||| |||||| | |||||||| |||||| |||||||| ||||| ||||||  ||    
T  26878352 ctgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactg 26878253  T
Q  364 ttttcagcttatttt 378  Q
    |||||||||||||||    
T  26878252 ttttcagcttatttt 26878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 404
Target Start/End: Complemental strand, 37389300 - 37389196
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||||||| |||||||||||||||||||||| |||||| ||||| ||| | | || ||| |||||| || ||| |||| |||||||||||    
T  37389300 cataagttttgtgagactcttcgggagaacttatgaaaacaacttatgacattgttcaaatgctgcttttagctta-ttctcataagtactccaagatag 37389202  T
Q  399 cttata 404  Q
    ||||||    
T  37389201 cttata 37389196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 440
Target Start/End: Original strand, 46778122 - 46778284
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||||||||  |  | |||||| || ||||| || ||| ||||||||||||||||||| |||||| ||||  ||||||||| | |||||||||      
T  46778122 cttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctta-- 46778219  T
Q  377 tttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
    ||||| ||||  |||||||||| |||| ||||||  ||||||| || |||||||| |||||||||    
T  46778220 tttcataagttgtccaagatagtttatgaaaacagtttatagcataaacaaaaacaatttaactt 46778284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 31365114 - 31365188
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| |||||||||||||| ||  | ||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  31365114 attggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatg 31365188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 38902217 - 38902104
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||||||| || ||||||||||| || || ||||||||| ||  | |||||| || |||| ||||||||||||| |||| ||||| ||||| ||||    
T  38902217 ctgtttgaattgcctcatttgagcttatctactggcataagttttgcaa-actgtttggaagaatttatgaaaacagcatatgacattgttcatacgttg 38902119  T
Q  364 ttttcagcttatttt 378  Q
    |||||| ||||||||    
T  38902118 ttttcaacttatttt 38902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 448
Target Start/End: Complemental strand, 2719583 - 2719437
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||| | ||| |||||| | ||||||||| ||||||| ||||    ||||  ||||||||||| |||||||||||| || |||| |||||||||||||    
T  2719583 taagttgtatgacactgtttgagagaacttaggaaaacaacttaaactattgtccataagttgttctcagcttatttt-cataagttctccaagatagct 2719485  T
Q  401 tat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||| ||||||  |||||||||| || ||||| |||| ||||||||||||    
T  2719484 tatgaaaacagtttatagcttaaac-aaaacaatttcactttattttat 2719437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 449
Target Start/End: Complemental strand, 20170625 - 20170490
Alignment:
Q  314 actgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa-caact 412  Q
    |||||| ||||||||||| |||||||||| |||| |||  ||||||| | |||||| |||||||| ||  ||| ||| || ||| ||| ||||| |||||    
T  20170625 actgtttgggagaacttaagaaaacagctaatgggatttttcataagcttttttcaacttatttt-cattagttctcaaaaataacttgtaaaaacaact 20170527  T
Q  413 tatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| || |||||||| ||||||| ||||||||||    
T  20170526 tatagcatatacaaaaacaatttaacattattttatc 20170490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 21574595 - 21574458
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaaca 409  Q
    |||||||||| |||||| |||||||||||| |||||| ||| | ||||||| || ||| |||||||||  || |||  ||||| | |||||||||||| |    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacat-gttcataagctgcttttagcttatttc-cataagctctccatgttagcttataaaaaa 21574498  T
Q  410 acttatagcttacacaaaaacgatttaactttattttatc 449  Q
    | |||||||||| |   |||| ||||||||||||||||||    
T  21574497 agttatagcttatatgtaaacaatttaactttattttatc 21574458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 30956662 - 30956729
Alignment:
Q  383 aagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||||||||||||| | ||||||||||||||| || |||||||| ||||||||||||||||||    
T  30956662 aagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatc 30956729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 449
Target Start/End: Original strand, 30972474 - 30972541
Alignment:
Q  383 aagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||||||||||||| | ||||||||||||||| || |||||||| ||||||||||||||||||    
T  30972474 aagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatc 30972541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 45264319 - 45264398
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||  ||||||||| | | ||||||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||    
T  45264319 cataagtttagtgagactggttgagagaacttatgaaaacaacttacggcattgttcataagctgttttcaccttatttt 45264398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 33046717 - 33046829
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgt---gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagt 361  Q
    ||||||||||| ||||||| || ||| || || ||||||||| |||   ||||||||| ||||| ||||| |||||||  || || ||||| ||||||||    
T  33046717 tgtttgaattggcttattttagtttatctactggcataagttttgttgcgagactgtttgggaggacttacgaaaacaatttctgacattggtcataagt 33046816  T
Q  362 tgttttcagctta 374  Q
    |||||||||||||    
T  33046817 tgttttcagctta 33046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 441
Target Start/End: Original strand, 42747700 - 42747872
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagc-ttatggcattgctcataagtt 362  Q
    |||||||  |||||||||||||| ||| || ||  |||||||  ||||||||||||   ||||||||||||||||| | ||||| ||||| | ||||| |    
T  42747700 ctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactttatgacattgtttataagct 42747799  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaacttt 441  Q
    ||||||  |||| |||||| ||||  ||||||||||     |||||| ||||||||||||||| |||  ||||||||||    
T  42747800 gttttctcctta-ttttcagaagttatccaagatag-----aaaacagcttatagcttacacataaataatttaacttt 42747872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 53762326 - 53762426
Alignment:
Q  278 ttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||||||| || ||||||||| | | ||| |||||||| ||||||| || ||||||||||||||| || || ||||||| |||||||| ||||||    
T  53762326 ttatttgagcttatctactagcataaatgcctgtaagactgttagggagaaattttgaaaacagcttatgaca-tgttcataagctgttttcaacttatt 53762424  T
Q  377 tt 378  Q
    ||    
T  53762425 tt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 429
Target Start/End: Original strand, 18405763 - 18405914
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| || ||  |||||||| |||||||||||| |  ||||||||||||||||| | | | || |  ||||||  | |||  ||||||  |    
T  18405763 ttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagctta-at 18405861  T
Q  378 ttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaa 429  Q
    |||| |||| |||||||||||||||| ||||||||||||||| || |||||||    
T  18405862 ttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 441
Target Start/End: Original strand, 28622007 - 28622094
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaacttt 441  Q
    ||||||| ||||||||| ||||||| || |||| ||| ||||||| |||| |||||| |||||||||||||||||||| | ||||||||    
T  28622007 tcataagctgttttcaggttatttt-cataagttctcgaagatagtttatgaaaacagcttatagcttacacaaaaacaacttaacttt 28622094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 402
Target Start/End: Original strand, 34235012 - 34235150
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcat--tgctcataagtt 362  Q
    |||||| ||||||||||| ||||||| || ||| |||||||| || | ||| ||| | ||||||||||||| |||||||||| |||  |  ||||||| |    
T  34235012 tgtttgtattgacttattcgagcttatctactaacataagttttgcgtgaccgtttgagagaacttatgaatacagcttatgacattattgtcataagct 34235111  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagctta 402  Q
    ||| |||| | | ||| ||||||| |||||||||||||||    
T  34235112 gttatcaggtca-tttgcacaagttctccaagatagctta 34235150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 430
Target Start/End: Original strand, 54837000 - 54837118
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaaca 409  Q
    ||||||||| || |||| |||||||||||||||||| || || |||||| |||||||| |||||||||| | |||   ||||||||||||||| |||| |    
T  54837000 gagactgtttggaagaatttatgaaaacagcttatgaca-tgttcataacttgttttccgcttattttt-ataagctgtccaagatagcttatgaaaata 54837097  T
Q  410 acttatagcttacacaaaaac 430  Q
    ||||| || ||| ||||||||    
T  54837098 acttacagtttatacaaaaac 54837118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 449
Target Start/End: Original strand, 30573892 - 30574017
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||||||||||||||||  ||||||||| | ||||||| |||||||||||||| || ||  ||  |||||||||||||||| |||||| | ||||| |||    
T  30573892 gagaacttatgaaaacaaattatggcat-gttcataagctgttttcagcttatgtt-catcagctctccaagatagcttatgaaaacatcatatagatta 30573989  T
Q  422 cacaaaaacgatttaactttattttatc 449  Q
     | |||||  | ||||||||||||||||    
T  30573990 taaaaaaaaaacttaactttattttatc 30574017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 451
Target Start/End: Original strand, 36631030 - 36631156
Alignment:
Q  325 gaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttaca 423  Q
    |||||||||||| ||||||||| |  |  ||| ||| | ||||| ||||||||| || |||| |||||| |||||| |||||| ||||||||||| |  |    
T  36631030 gaacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttatttt-cataagttctccaatatagctcataaaaacaacttatagcatgta 36631128  T
Q  424 caaaaacgatttaactttattttatcct 451  Q
    ||||||| ||||||||||| ||||||||    
T  36631129 caaaaacaatttaactttactttatcct 36631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 343
Target Start/End: Complemental strand, 43046808 - 43046738
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    |||||||||||||| |||| ||  || |||| ||| |||||||||||| |||||||||||||||||||||||    
T  43046808 attgacttatttgaacttatctatta-catatgttttgtgagactgtttgggagaacttatgaaaacagctt 43046738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 46031106 - 46031004
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagc 399  Q
    ||||||| | ||||||||||   ||||||||| ||||||||| |||| ||||  ||||||| ||||||||||||| |||| | |||| |||||||||||     
T  46031106 ataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagctta-ttttaataagttctccaagatagt 46031008  T
Q  400 ttat 403  Q
    ||||    
T  46031007 ttat 46031004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 47903998 - 47904081
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| ||||||||||||||| ||| | |||   ||||| || ||||| |||||| ||||||||||||||||||||||||||    
T  47903998 ctgtttggattgacttatttgagtttatcctctgatataagctcctgtgacactgtttgggagaacttatgaaaacagcttatg 47904081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 14145953 - 14145879
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| ||||  ||||||||||||||| |||| |||||||||| || || ||||| ||||||||||||||||||    
T  14145953 ttttcataagtaatccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatc 14145879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 429
Target Start/End: Complemental strand, 22203537 - 22203417
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||||||||||| || ||||||||||||||||||||||| ||||   | |||| |   | ||| ||||||| || |||| |||||||||||||||| |||    
T  22203537 tgtgagactgtttgg-agaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttatttt-cataagttctccaagatagcttatgaaa 22203440  T
Q  407 acaacttatagcttacacaaaaa 429  Q
    ||||||||||| ||| |||||||    
T  22203439 acaacttatagattatacaaaaa 22203417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 37273240 - 37273148
Alignment:
Q  309 gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||||||||| |||||| |||||| ||||| |||||| || ||  ||||||||||||||| |||| ||| || |||| ||||||||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgaca-tgtccataagttgttttcaactta-tttccataagttctccaagatagcttat 37273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 420
Target Start/End: Original strand, 33965451 - 33965563
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    ||||||||||||  ||||| |||||| ||| ||| |||| ||| || |||||||| |||||||||| |||| || |||  || ||||||||||||| |||    
T  33965451 tgtgagactgtttaggagaccttatggaaatagcatatgacat-gcccataagttattttcagctttttttccataagctcttcaagatagcttatgaaa 33965549  T
Q  407 acaacttatagctt 420  Q
    ||| ||||||||||    
T  33965550 acatcttatagctt 33965563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 449
Target Start/End: Complemental strand, 1816676 - 1816550
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctt 420  Q
    ||||||| |||||||| | |||||| ||||  ||||| | |||||||||||||||||  | |||  |||||  ||||||||| ||||||||||||| |||    
T  1816676 ggagaacatatgaaaataacttatgacattt-tcataggctgttttcagcttattttg-ataagctctccagtatagcttatgaaaacaacttatatctt 1816579  T
Q  421 acacaaaaacgatttaactttattttatc 449  Q
    | ||||||||  ||| |||||||||||||    
T  1816578 atacaaaaacagtttgactttattttatc 1816550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 451
Target Start/End: Original strand, 35959474 - 35959561
Alignment:
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttata-aaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    ||||||||||||||| || || | ||| || |||||||||| |||||||||| ||| || |||||||  ||||||||||||||||||||    
T  35959474 ttttcagcttatttt-caaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaactttattttatcct 35959561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 429
Target Start/End: Complemental strand, 40665491 - 40665416
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaa 429  Q
    ||||||| |||||||||||||||||| | |||  |||||||||| ||||| |||||| |||||| ||||||||||||    
T  40665491 tcataagctgttttcagcttattttt-ataagctctccaagataacttatgaaaacatcttataacttacacaaaaa 40665416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 400
Target Start/End: Complemental strand, 47513760 - 47513670
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||||||||||||||| |||||||||||||  ||||| ||  | ||||||||||||||||  ||| |||||| |||  |||||||||||||    
T  47513760 tgtgagactgttcgggaggacttatgaaaacaagttatgaca-cgttcataagttgttttcaattta-ttttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 11253653 - 11253570
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||||||||||||||||| ||| || ||||||||||  | || ||||||||| || |||| |||| |||||| ||||||    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatg 11253570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 454
Target Start/End: Original strand, 33883758 - 33883857
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatt-taactttattttatcct 451  Q
    ||||||||||||||||||||| |||||| |||| ||| ||||||||||||  ||||||| ||||| | | |||||||  ||| ||||||||||||||| |    
T  33883758 tcataagttgttttcagctta-ttttcataagttctctaagatagcttatgtaaacaacatatagttcatacaaaaa--attgtaactttattttatctt 33883854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 44014716 - 44014799
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| |||| |||||||||| ||| || |||||||||   || ||||||||||| | || |||||||||||||||||||||    
T  44014716 ctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatg 44014799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 403
Target Start/End: Complemental strand, 45541662 - 45541585
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||||||||||||||||||||| || || ||||||| ||||||||| ||| || ||| ||||  |||||||||||||||    
T  45541662 agaacttatgaaaacagcttatgaca-tgttcataagctgttttcaggtta-ttctcataagttatccaagatagcttat 45541585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 399
Target Start/End: Original strand, 47249465 - 47249538
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagc 399  Q
    |||||||||||||||  |||||| ||| | ||||||||||||||  ||||||||| || |||||||||||||||||    
T  47249465 agaacttatgaaaaccacttatgacat-gttcataagttgtttttggcttatttt-cataagtcctccaagatagc 47249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 24684741 - 24684926
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataag-ttg 363  Q
    |||||| ||| ||||||||||||||| || || ||||||||| | ||||||  || ||  ||||||||||||||| |||||| || |   || ||| ||     
T  24684741 tgtttggattaacttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgacaatttgcacaagattt 24684840  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||  |||| ||||| ||||  |||| | || |||||||||| ||||||||||| || |||||||| ||| || |||||||||||    
T  24684841 ttttcgtctta-ttttctcaagatctccgatattgcttataaaagcaacttatagcatatacaaaaacaattaaaatttattttatc 24684926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 31365235 - 31365309
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| |||||||||| ||| ||  | |||||| || ||||| |||||| ||||||||||||||| ||||||||||    
T  31365235 attggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatg 31365309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 33405182 - 33405268
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    ||||||| |||||  ||||| |||| || ||||||||||||| |||||| ||||||||||| |  ||||| | ||||||||||||||    
T  33405182 tgttttcggcttaactttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 45590802 - 45590732
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatga 334  Q
    ||||||||||||||| ||||| |||| || ||||||||||  | |||||||||||| |||||| |||||||    
T  45590802 tgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 47132468 - 47132397
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaa 337  Q
    ||||||| |||| |||||||||||||| || || |||  |||| ||||||||||||  ||||||||||||||||    
T  47132468 ctgtttggattggcttatttgagcttatctactggca--agttttgtgagactgttttggagaacttatgaaaa 47132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 50952441 - 50952372
Alignment:
Q  307 ctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||||| |||||| || |||||||||||||| || || ||||||  |||||| |||||||||    
T  50952441 ctgtgagactgttcgagagaacgtacgaaaacagcttatgaca-tgttcataaactgttttaagcttattt 50952372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 13715503 - 13715572
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||| |||| || |||||||| ||| |||||||||||| || |||||||   |||||||||||||    
T  13715503 cttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatg 13715572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 404
Target Start/End: Original strand, 23808026 - 23808121
Alignment:
Q  307 ctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttata 404  Q
    ||||||||| ||| |||| ||||||||||| ||||||||| || || ||| || ||||||||| |||| |||||| ||   |||||||||||||||||    
T  23808026 ctgtgagacggtttgggaaaacttatgaaagcagcttatgaca-tgttcacaaattgttttcatctta-ttttcataaactctccaagatagcttata 23808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 23816300 - 23816255
Alignment:
Q  334 aaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||    
T  23816300 aaaacaggttatggcattgttcataagctgttttcaacttattttt 23816255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 27290884 - 27290932
Alignment:
Q  328 cttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||||||||| || ||| |||||| ||||||||||||||||    
T  27290884 cttatgaaaacagcttatgaca-tgcccataagctgttttcagcttattt 27290932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 32582888 - 32582816
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacag 340  Q
    |||||| ||||||||||||||| ||| || ||| ||||||||   | |||||||| ||||||||| ||||||||||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtt---ttagactgtttgggagaactcatgaaaacag 32582816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 34637947 - 34637984
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  34637947 tgtgagattgtttgggagaacttatgaaaacagcttat 34637984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 44061081 - 44061126
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||||| | |||||| ||||||| ||||||||||    
T  44061081 aaaacaacttatagcttatagaaaaacaatttaaccttattttatc 44061126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 48397658 - 48397613
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||||| | |||||| |||| |||||||||||||    
T  48397658 aaaacaacttatagcttaaataaaaacaatttgactttattttatc 48397613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 418
Target Start/End: Original strand, 53789416 - 53789533
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||||||| |  | |||||||| || |||||||||||| || |  ||||||| | |||||||||||  ||||| |||| ||||| |||||    
T  53789416 cataagttttgtgagacttt--gagagaacttttggaaacagcttatgacacttttcataagcttttttcagctta-atttcataagttctccatgatag 53789512  T
Q  399 cttat-aaaacaacttatagc 418  Q
    ||||| | |||||||||||||    
T  53789513 cttatgataacaacttatagc 53789533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 344
Target Start/End: Original strand, 22892 - 22964
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    |||| ||||||||| |||  || || ||||||||| ||||||| ||||  |||||| ||||||||||||||||    
T  22892 attggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagctta 22964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 407
Target Start/End: Complemental strand, 902025 - 901934
Alignment:
Q  315 ctgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||| |||| ||||||||||||||||| ||  ||||   |||||| | |||||| |||||||| || |||| |||||| |||||||||||||    
T  902025 ctgtttgggaaaacttatgaaaacagctaataacattttccataagcttttttcaacttatttt-cataagttctccaatatagcttataaaa 901934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 446
Target Start/End: Original strand, 1217809 - 1217900
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||||||| ||||  ||||| |||| ||| | |||||||||| |||||| |||||| ||||||  ||||| ||||||||| |||||    
T  1217809 cataagttgttttcatctta-ctttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 5391968 - 5391917
Alignment:
Q  326 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||||||||||| || || ||||||| |||||||| ||||||||    
T  5391968 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttatttt 5391917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 25186046 - 25185995
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||||||||||||| |||||||| ||||||   |||||||||||||||||||    
T  25186046 cataagttgttttcatcttatttt-cacaagatttccaagatagcttataaaa 25185995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 377
Target Start/End: Complemental strand, 32711527 - 32711464
Alignment:
Q  313 gactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||| | ||||||||||||||| ||||||| ||| || | ||| ||||||||||||||||||    
T  32711527 gactgtttgagagaacttatgaaaatagcttatagca-tgtttataggttgttttcagcttattt 32711464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 39723219 - 39723270
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||| ||||||||||||| || || ||||||| |||||||||||||||    
T  39723219 agaacttatcaaaacagcttatgaca-tgttcataagctgttttcagcttatt 39723270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 45021461 - 45021517
Alignment:
Q  166 aaaaatgataagctgtaacttttaagctacatgctgctttaagtagcttatcaaaaa 222  Q
    ||||||||||| || ||| |||||| ||| | ||||||| |||||||||||||||||    
T  45021461 aaaaatgataaactataagttttaaactataagctgcttaaagtagcttatcaaaaa 45021517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 9e-34; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 264 - 448
Target Start/End: Original strand, 17822783 - 17822967
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||| ||||||||||||||| || ||  |||||||||||||||||| ||  ||||||| ||||||||||||||||| ||||  ||||||| |     
T  17822783 ctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctt 17822882  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    |||| |||||| |||||| |||| |||||||||||||||| ||||||||||||||| || | || ||| ||||||||| |||||||    
T  17822883 tttttagctta-ttttcataagttctccaagatagcttatgaaaacaacttatagcatataaaataacaatttaacttaattttat 17822967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 27043748 - 27043935
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||||||||||||||||| || ||  |||||||| ||||| |||||| || |||| ||||| ||| |||||||||||| |  ||||| |||    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatggcatcgtccataaattg 27043847  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    |||| |||||| | |||| | || ||||||||||| |||| |||||| ||||||||||| || ||||| ||||||||||||||||||||    
T  27043848 tttttagctta-tattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcct 27043935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 401
Target Start/End: Original strand, 13126494 - 13126630
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| ||||||| |||||| || ||| |||||||| |||||||||||| || ||||||||| ||||||||||||| ||||  ||||||| |     
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagctt 401  Q
    ||||||||||| |||||| |||| ||| ||||||||||    
T  13126594 ttttcagctta-ttttcataagttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 440
Target Start/End: Original strand, 35571549 - 35571725
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || |||||||||||| |||| ||  ||| |||||||||| | ||||||||||||  || || |||| || ||    
T  35571549 ctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctg 35571648  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
     ||||| |||| ||||||||||| ||| |||||||||||| |||||| ||||||||||| || ||||| || ||||||    
T  35571649 gtttcaactta-ttttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaatataactt 35571725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 49939869 - 49939981
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||| ||||| ||||||| |||||| || |||||||||| | ||||||||| || || |||||||||||||| |||||||| ||||| ||||||| ||    
T  49939869 ctgtttcaattggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctg 49939968  T
Q  364 ttttcagcttatt 376  Q
    |||||||||||||    
T  49939969 ttttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 264 - 416
Target Start/End: Complemental strand, 54426195 - 54426043
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || || ||||||||| |||||||||| | ||||||||||| |||||||||||||| || |  ||||||| |     
T  54426195 ctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagctt 54426096  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    ||||||  ||| |||||| |||| |||||| |||| |||| |||||||||||||    
T  54426095 ttttcaagtta-ttttcataagttctccaatatagattataaaaacaacttata 54426043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 49940085 - 49940165
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||||| ||||||||||||||||||| || ||| |||||||| |||||||||||| | ||||||||||||||||||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 25332891 - 25332745
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctcc-aagatag 398  Q
    ||||||| ||||||||| || ||||||||||  ||||||| |||||||||||  ||||||||||||||||||||||||| || |||| ||   |||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttatttt-cataagttctgataagatag 25332793  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||| |||| | |||| |||||| |||||||| ||||||||| ||||    
T  25332792 cttataaaaatagcttagagcttatacaaaaacaatttaacttcattt 25332745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 17884174 - 17884035
Alignment:
Q  313 gactgttcgggagaacttatgaaaacagcttatggcat---tgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    ||||||||||||||||||||| ||| | ||||||  ||   || ||||||||||||||||||| ||||| || |||  |||||| ||||||||| |||||    
T  17884174 gactgttcgggagaacttatggaaataacttatgaaatgtatgttcataagttgttttcagctaatttt-cataagctctccaatatagcttatgaaaac 17884076  T
Q  409 aacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| ||| |||| |||||||| ||||||||||||||||||    
T  17884075 aactgataacttatacaaaaacaatttaactttattttatc 17884035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 266 - 421
Target Start/End: Complemental strand, 49202792 - 49202640
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| |||||||||||||| ||   || || ||||||||| |||||||||||| || ||||||||| ||| ||| ||||  ||||| ||||||||||||    
T  49202792 gtttgtattgacttatttgaact---ctacttgcataagttttgtgagactgtttggaagaacttataaaaccagattatcacattgttcataagttgtt 49202696  T
Q  366 ttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatagctta 421  Q
    |||| |||| ||||||  |||  ||||||||||||||  ||||||||||||||||||    
T  49202695 ttcaactta-ttttcattagttatccaagatagcttacgaaaacaacttatagctta 49202640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 451
Target Start/End: Complemental strand, 22030352 - 22030168
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| ||||||||||||||||||  ||  ||||||||||| |||||| || || |||||||||||||||||||||||||| || |  ||| ||| | ||     
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttc 22030253  T
Q  367 tcagcttatttttcacaagtcctccaagatagcttataa-aacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    |||| ||| |||||| |||| ||| ||  || ||| ||| ||||||||||||| || |||||||  || |||||||||||||||||    
T  22030252 tcaggtta-ttttcataagttctctaatttaacttgtaagaacaacttatagcatatacaaaaataatataactttattttatcct 22030168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 39691067 - 39691148
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||||||||| | ||||| |||||  ||||||||||    
T  39691067 ctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttat 39691148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 449
Target Start/End: Original strand, 50681044 - 50681192
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagct 400  Q
    |||||| |||||||||||| | |||||||||||||||||| | ||| || |  ||||||| | ||||||  ||||||| || || | |||||| ||||||    
T  50681044 taagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttatttt-cataatttctccaatatagct 50681142  T
Q  401 tata-aaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||||||||||||| || |||||||| ||||||| ||||||||||    
T  50681143 tatataaacaacttatagcatatacaaaaacaatttaacattattttatc 50681192  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 273 - 404
Target Start/End: Original strand, 25904150 - 25904280
Alignment:
Q  273 ttgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagct 372  Q
    |||||||||||||||||| |   |  ||||| || |||||||||||| |||||| ||||||||||||||||||| ||||  ||||||| | |||||||||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  373 tatttttcacaagtcctccaagatagcttata 404  Q
    ||||||| | |||| |||||| | ||||||||    
T  25904250 tattttt-ataagttctccaaaacagcttata 25904280  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 447
Target Start/End: Complemental strand, 1706739 - 1706591
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| |||||||| ||| | ||||| |||||||||||||||||||||||| ||||||| | ||| || |||| |||||| |||   ||||||||||    
T  1706739 cataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaactta-ttttcataagctgtccaagatag 1706641  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
     |||| |||||| ||||||||||  || ||||| ||| ||| ||||||||    
T  1706640 tttatgaaaacagcttatagcttctacgaaaacaattgaacattatttta 1706591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 37863932 - 37864053
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttac 422  Q
    |||||||||||||||||||||||| ||  | |||||||||||||||| |||| ||  || ||   | |||||||||||||| ||||| |||||| ||||     
T  37863932 gagaacttatgaaaacagcttatgacac-gttcataagttgttttcaccttaatt--cataacctcaccaagatagcttatgaaacagcttatatcttaa 37864028  T
Q  423 acaaaaacgatttaactttatttta 447  Q
    |||||||| ||||||||||||||||    
T  37864029 acaaaaacaatttaactttatttta 37864053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 348
Target Start/End: Complemental strand, 18815175 - 18815091
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggc 348  Q
    ||||||| |||| |||||||||||||| || |||||||||||| |||||||||||| | ||||||| || || ||||||||||||    
T  18815175 ctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaactaataaagacagcttatggc 18815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 52746848 - 52746943
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| ||||||||||| ||||| || ||| | | ||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||||||||    
T  52746848 tcataagctgttttcagctgatttt-cataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatc 52746943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 276 - 448
Target Start/End: Complemental strand, 22666629 - 22666456
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||||| |||||||| || ||  | ||||||  ||||||||||| ||| |||||||||||| ||| ||||| ||||| |||| |||||||||| |||||     
T  22666629 acttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgacattgatcatgagttgttttctgctta- 22666531  T
Q  376 ttttcacaagtcctccaagatagcttat--aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    || ||| |||| ||||| ||||||||||  |||| | ||||||||||| ||  |||  ||| |||||||||||||    
T  22666530 ttgtcataagttctccatgatagcttatgaaaaaaagcttatagcttatacgtaaaaaattgaactttattttat 22666456  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 445
Target Start/End: Original strand, 52315118 - 52315296
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| ||||||||||||||| ||| || ||  | |||||| ||||||| |||| || ||||||||| |||||| |||||  ||||  |||||||||| ||    
T  52315118 tttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctt 52315217  T
Q  367 tcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    |||||||| |||||| ||||  ||||| |||||||||  |||||||||||| |||    |||||| ||| ||||||||||    
T  52315218 tcagctta-ttttcataagttttccaaaatagcttatggaaacaacttataactttactaaaaacaattaaactttattt 52315296  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 449
Target Start/End: Complemental strand, 3155690 - 3155570
Alignment:
Q  329 ttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaa 427  Q
    |||||| |||| |||||||||||| || |||  ||||||||||||||||| ||  ||| || |||||||| |||| |||||| ||| ||||||  |||||    
T  3155690 ttatgagaacaacttatggcattgttcgtaaactgttttcagcttatttt-cattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaa 3155592  T
Q  428 aacgatttaactttattttatc 449  Q
    ||| ||||||||||||||||||    
T  3155591 aacaatttaactttattttatc 3155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 449
Target Start/End: Original strand, 47118918 - 47119068
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    |||||| || |||||||||| | || |||||||||||||||| || ||| ||||| | ||  ||||||||||||||| | |||| |||| || |||||||    
T  47118918 gcataaattatgtgagactgcttggaagaacttatgaaaacaactcatgacattg-ttattggttgttttcagctta-tcttcataagttcttcaagata 47119015  T
Q  398 gcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || ||| || ||||||||||||||| |  ||||| |||||||||| |||||||    
T  47119016 gcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatc 47119068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 369
Target Start/End: Original strand, 15173223 - 15173326
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| |||||||||||||| |||| || ||  |||||||| |||||||||||| ||||||  ||||||||| |||||||| || |  ||||||||| ||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagttttt 15173322  T
Q  366 ttca 369  Q
    ||||    
T  15173323 ttca 15173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 418
Target Start/End: Original strand, 21731574 - 21731728
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||  |||||||||| || || ||  |||||||| ||||||| |||| |||||||||||||||||||||||||  || |  ||||||  |     
T  21731574 ctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaactt 21731673  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagc 418  Q
    |||||| ||||  ||||| || | |||||| ||||||||| |||||||||||||||    
T  21731674 ttttcaactta-ctttcataaattctccaatatagcttataaaaacaacttatagc 21731728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 403
Target Start/End: Complemental strand, 22662150 - 22662024
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||||| |||||||| || ||  | ||||||  ||||||||||| ||| |||||||||||| ||| ||||| ||||| |||| |||||||||| |||||     
T  22662150 acttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgacattgatcatgagttgttttctgctta- 22662052  T
Q  376 ttttcacaagtcctccaagatagcttat 403  Q
    || ||| |||| ||||| ||||||||||    
T  22662051 ttgtcataagttctccatgatagcttat 22662024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 25885885 - 25885826
Alignment:
Q  391 caagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  25885885 caagataacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatc 25885826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 34430626 - 34430696
Alignment:
Q  274 tgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    |||||||||||||||||  | |||||||||||| ||||  ||||||||| ||||||||| |||||||||||    
T  34430626 tgacttatttgagcttatttactagcataagttttgtgcaactgttcggaagaacttataaaaacagctta 34430696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 39011054 - 39011128
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||||||||||||| ||||  ||||||||   ||||||| ||| |||||||| |||||||||||||||||    
T  39011054 attgacttatttgagcttatcttcgggcataagtatcgtgagacagtttgggagaacatatgaaaacagcttatg 39011128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 448
Target Start/End: Complemental strand, 40174701 - 40174531
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    ||||| ||||||||| ||| || ||| |||||||| |||||||||||| |||| ||||||||||||||      | |||||  |||||  |||||||| |    
T  40174701 attgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaaca------gacattgtccataaactgttttcaac 40174608  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||| || |||||||| ||||||  |||||||| |||||| ||||||||||  |  ||||| ||||||||||| |||||    
T  40174607 tta-ttatcacaagttctccaatgtagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttat 40174531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 42685484 - 42685391
Alignment:
Q  356 ataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||  ||||||||| |||| || |||||| ||||||||| ||||||||||| |||||| | |||||| ||||||||| ||||||||    
T  42685484 ataagttgtttttggcttatttt-cacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatc 42685391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 449
Target Start/End: Original strand, 55414406 - 55414523
Alignment:
Q  332 tgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    ||||||||||||||| ||||  ||||||| | |||||| |||| |||||| |||| |||||||||| ||||| ||||||| ||||||| ||  ||||||     
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaactta-ttttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaa 55414504  T
Q  431 gatttaactttattttatc 449  Q
     | ||||||||||||||||    
T  55414505 aaattaactttattttatc 55414523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 454
Target Start/End: Complemental strand, 2996678 - 2996535
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    |||||||||| | |||| |||||||||||| |||||| |||  | |||||| | |||||| |||||||| || | |  |||||||||||||||| |||||    
T  2996678 tgagactgtttgagagagcttatgaaaacaacttatgacatgtc-cataagcttttttcaacttatttt-catacgctctccaagatagcttatgaaaac 2996581  T
Q  409 aacttatagcttacacaaaaacgatttaactttattttatcctatg 454  Q
    |||||||| |||| | |||||| |||| ||| ||||||||| ||||    
T  2996580 aacttataacttatataaaaacaatttgactgtattttatcttatg 2996535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 303 - 449
Target Start/End: Complemental strand, 29774353 - 29774206
Alignment:
Q  303 agttctgtgagactgttcgggagaacttatgaaaacagcttatggca-ttgctcataagttgttttcagcttatttttcacaagtcctccaagatagctt 401  Q
    |||| ||||||||||||  |||||||||||||||| |||||||| || ||  ||||||||| |||| |||||| ||||||| ||| ||| |||| |||||    
T  29774353 agttttgtgagactgtttaggagaacttatgaaaatagcttatgtcattttttcataagtt-tttttagctta-ttttcaccagttctcaaagacagctt 29774256  T
Q  402 at-aaaacaacttatagcttacac-aaaaacgatttaactttattttatc 449  Q
    || ||||||  ||||||| ||||| |||||| | ||||| ||||||||||    
T  29774255 atgaaaacagtttatagcatacacaaaaaacaacttaacattattttatc 29774206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 41336911 - 41336798
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||| ||| || ||  |||||||| |||||||  ||| || |||||||| |||||||||||||| || |  ||||||| | |    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttt 41336812  T
Q  365 tttcagcttatttt 378  Q
    ||||| ||||||||    
T  41336811 tttcaacttatttt 41336798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 449
Target Start/End: Complemental strand, 23459777 - 23459595
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| |||| | |||||||||||| || |||||||||||   || ||||||||  |||||||||||||||| |||||||| || || | ||||||| ||    
T  23459777 gtttggattggcatatttgagcttatctactagcataagtatggtaagactgtttcggagaacttatgaaaaaagcttatgaca-tgttaataagttatt 23459679  T
Q  366 ttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||| | |||| ||||  | ||||||  ||||| |||||| ||||||||||| |  ||||| | ||||||| ||||||||    
T  23459678 ttcaactta-tattcataagtttttcaagatctcttatgaaaacagcttatagcttataagaaaacaacttaacttcattttatc 23459595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 28300277 - 28300399
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||| ||||||||||||| |||| ||| | || ||||||||||||| |||||||| || |||  || ||||||||| ||| |||| |  ||||||||||    
T  28300277 gagaatttatgaaaacagcctatgacat-gttcttaagttgttttcaacttatttt-cataagctcttcaagatagcctatgaaaatagtttatagctta 28300374  T
Q  422 cacaaaaacgatttaactttatttt 446  Q
     |||||||| |||||||||||||||    
T  28300375 tacaaaaacaatttaactttatttt 28300399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 52172869 - 52172794
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagt-tctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| ||||||||||||||  | || |||||||| | |||||||||||| |||| |||||||||||||||||||||    
T  52172869 attggcttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatg 52172794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 437
Target Start/End: Complemental strand, 20031901 - 20031728
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg- 363  Q
    |||||| |||||| |||||||| |||  |||| || |||||| |||||   |||| |||||| ||| |  |||||||||||||||||| | ||||| ||     
T  20031901 tgtttggattgacatatttgagtttatattctggcgtaagttttgtgatgttgtttgggagagcttgttgaaacagcttatggcattgttgataagctgt 20031802  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaa 437  Q
    ||||||||| | |||||| |||| ||| || ||||||||| |||||  |||||||||||||  ||||| ||||||    
T  20031801 ttttcagctca-ttttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaatttaa 20031728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 20719824 - 20719746
Alignment:
Q  295 ctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagctt 373  Q
    |||||||||||| |||| |||| || || |||||||| |||||||||||||| ||||| |  |||| ||||||||||||    
T  20719824 ctagcataagttttgtgcgactatttggaagaacttaagaaaacagcttatgacattgtttgtaagctgttttcagctt 20719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 448
Target Start/End: Complemental strand, 29913064 - 29912917
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| || || |||||| ||||||||||||||||| ||||| || ||||  || | |||| |||||||||||||||| | ||||  ||||||||||    
T  29913064 cataagttttgcgaaactgtttgggagaacttatgaaaatagctt-tgacatttttccttagttcttttcagcttattttt-ataagttgtccaagatag 29912967  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||||| ||||| |||| || | || || ||||| |||| ||||||||||||    
T  29912966 cttatgaaaacgacttttaacatatac-aaaacaattttactttattttat 29912917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 39603124 - 39603170
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  39603124 ataagttttgtgagactgtttgggagaacttaggaaaacagcttatg 39603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 346
Target Start/End: Complemental strand, 45622348 - 45622310
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  45622348 tgtgagactgttcgggagaacttatgaaaacaacttatg 45622310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 1137819 - 1137751
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||| ||||||  |||||||||||||||||| |||||| || || ||||||||||||||||| ||||||    
T  1137819 tgtgacactgtttaggagaacttatgaaaacatcttatgaca-tgttcataagttgttttcagtttattt 1137751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 1408040 - 1407924
Alignment:
Q  333 gaaaacagcttatggcattgctcataagttgtttt-cagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    |||||||||||||| ||||  ||||||| |||||| |||||||| || || || |  ||| ||||||||||| |||||| |||  |||||||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatctt-cataaattttcctagatagcttatgaaaacagcttgcagcttacacaaaaac 1407942  T
Q  431 gatttaactttattttat 448  Q
     |||||||| ||||||||    
T  1407941 aatttaactctattttat 1407924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 16494816 - 16494880
Alignment:
Q  357 taagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||| |||| |||| |||||  |||||||||||||||| ||||||||||||||||||    
T  16494816 taagttgttttcaacttagtttt-acaagctctccaagatagcttatgaaaacaacttatagctta 16494880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 29657527 - 29657454
Alignment:
Q  273 ttgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||||||||||||| || | | || ||||| ||||||| || | | ||||||||||||||||||||||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatg 29657454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 37575855 - 37575967
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||| ||||||||||||||| ||| || |||||||||  ||| |||| | |||| | ||||||||||||||| | |||||  || | |||||||||||    
T  37575855 tgtttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataaca-tactcataagttg 37575953  T
Q  364 ttttcagcttattt 377  Q
    ||||||||| ||||    
T  37575954 ttttcagctcattt 37575967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 449
Target Start/End: Complemental strand, 51630170 - 51630078
Alignment:
Q  357 taagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| ||||||||||||||||| || || | || ||||||||||||| |||| | ||||||||||| |  ||||| ||||||||||||||||||    
T  51630170 taagatgttttcagcttatttt-cataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatc 51630078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 29263432 - 29263337
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||||||||||| ||| ||||||  || || |||||||||| |||||||||||| |||||    ||||| || |||||||||||||||    
T  29263432 tcataagttgttttcagctta-tttccacaagctctgcaggatagcttatgaaaacaacttatcgcttatttgaaaacaatgtaactttattttatc 29263337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 42461356 - 42461289
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||| ||||||||||||||||| ||| |||| |  || |||||||||| ||||||||||||||    
T  42461356 tgagactgtttgggagaacttatgaaaatagcctatgac-gtgttcataagttgatttcagcttatttt 42461289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 49003973 - 49004033
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaa 337  Q
    |||||||||||||| || ||||| |||||| ||||||||| || | |||||||||||||||    
T  49003973 cttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaa 49004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 418
Target Start/End: Original strand, 50662715 - 50662810
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttata-aaacaacttatagc 418  Q
    |||||||||||||||||| | ||| || |  ||||||| | |||||| |||| ||||||||| | |||||| |||||||||| ||||||||||||||    
T  50662715 gagaacttatgaaaacagttaatgacaattttcataagcttttttcaactta-ttttcacaatttctccaatatagcttatataaacaacttatagc 50662810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 407
Target Start/End: Original strand, 26783 - 26924
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| |  || ||||||| | ||| ||||||||   ||||| |||||||||||||||||| ||    ||| ||| |     
T  26783 ctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaagct- 26881  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||||| ||| |||||| |||| |||||| |||||||||||||    
T  26882 ttttcagatta-ttttcataagttctccaatatagcttataaaa 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 451
Target Start/End: Original strand, 6927551 - 6927598
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||||    
T  6927551 aaaacaacttatagtttacatgaaaacaatttaactttattttatcct 6927598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 430
Target Start/End: Original strand, 16200010 - 16200065
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    |||||| ||||||||||||||||||||| |||||| |||||||| || ||||||||    
T  16200010 ttttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaac 16200065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 377
Target Start/End: Original strand, 43886112 - 43886162
Alignment:
Q  326 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||||||||||||||||  ||||||| | ||||||||||||||    
T  43886112 aacttatgaaaacagcttatggcatt-ttcataagctattttcagcttattt 43886162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 449
Target Start/End: Complemental strand, 55064937 - 55064800
Alignment:
Q  314 actgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagc--ttat-aaaacaa 410  Q
    |||||| |||||||||| |||||||| |||||| ||||  |||  || | |||||| |||||||| || |||| |||||||||| |  |||| ||||||     
T  55064937 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttatttt-cataagttctccaagataacatttatgaaaacag 55064839  T
Q  411 cttatagcttacacaaaaacgatttaactttattttatc 449  Q
    | |||||| ||||||||||| ||||||||| ||| ||||    
T  55064838 catatagcatacacaaaaacaatttaacttcattatatc 55064800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 6987660 - 6987742
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagt-tctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| ||||||||| ||||| ||| || ||||||||||| | |||||||||||| |||||| |||||| | ||| ||||||    
T  6987660 tgtttgtattgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatg 6987742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 9760481 - 9760407
Alignment:
Q  376 ttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| |||| |||||| ||||||||||||| ||||||||||| ||   |||||  ||||||||||||||||||    
T  9760481 ttttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatc 9760407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 25571411 - 25571298
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||| ||| || ||  ||||||||   ||| ||||||  |||||||||||| |||||| |||||  | || ||||||| ||    
T  25571411 ctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatgata-tgttcataagctg 25571313  T
Q  364 ttttcagcttatttt 378  Q
    |||||||||||||||    
T  25571312 ttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 25903934 - 25903861
Alignment:
Q  286 gcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataag 360  Q
    ||||| || ||| |||||||| |||||||||  | ||||||||||||| |||||||||||||||||  |||||||    
T  25903934 gcttatctactaacataagttttgtgagacttattgggagaacttatg-aaacagcttatggcatttttcataag 25903861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 27123270 - 27123383
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||| |||||||||||||||    ||||||||||| | |||||||||||| | |||| |||||| ||||| |||||| |||  ||  ||||||    
T  27123270 ctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtct-ttaagtt 27123368  T
Q  363 gttttcagcttattt 377  Q
    ||||||| |||||||    
T  27123369 gttttcaacttattt 27123383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 29388766 - 29388684
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||  ||||||||||||| |||| || ||| |||||||| ||| ||| |||| ||||||||||| |||| ||| |||||    
T  29388766 ctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatg 29388684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 430
Target Start/End: Complemental strand, 42121539 - 42121474
Alignment:
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    |||||||||||||  ||||||| ||||||||||||| || |||||||||||||||||| ||| ||||    
T  42121539 tttcagcttatttc-cacaagttctccaagatagctcatgaaaacaacttatagcttatacagaaac 42121474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 403
Target Start/End: Complemental strand, 55302388 - 55302263
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||| |||||| ||  | ||||||||| |||||| |||||| ||| |||||||  |||||||||||| || |  || |||| | ||||||||||| |    
T  55302388 cttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagctta-t 55302290  T
Q  377 tttcacaagtcctccaagatagcttat 403  Q
    ||||| ||||  ||||| |||||||||    
T  55302289 tttcataagttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 346
Target Start/End: Original strand, 437083 - 437164
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| ||||  |||||||||| || ||  |||||||| || ||||||||| || |||| |||||||||||||| ||||||    
T  437083 tgtttggattggtttatttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaacaacttatg 437164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 3176067 - 3176135
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||| ||||||  ||||| |||||||||||| |||||| |||  || ||||||||||||||||||||||    
T  3176067 tgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtct-ataagttgttttcagcttattt 3176135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 8705094 - 8705017
Alignment:
Q  263 actgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacag 340  Q
    |||||||| |||| || ||||||||||| ||  |  |||||||| |||||||||| | |||||||||||| |||||||    
T  8705094 actgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacag 8705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 40830948 - 40831028
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatga-aaacagctta 344  Q
    ||||||| |||| || ||||||||||| ||  | ||||||||| ||||||||||||||| |||| |||||| ||||||||||    
T  40830948 ctgtttggattggctaatttgagcttatctatt-gcataagttttgtgagactgttcggaagaaattatgagaaacagctta 40831028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 421
Target Start/End: Complemental strand, 45214423 - 45214366
Alignment:
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagctta 421  Q
    ||||||||||||||||   |||| ||||||||||| |||| ||||| |||||||||||    
T  45214423 ttttcagcttatttttattaagttctccaagatagtttatgaaacagcttatagctta 45214366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 418
Target Start/End: Complemental strand, 2244168 - 2244047
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| | ||| |||||| ||||||| || | ||||||||||||| || |  ||||||  | |||||| |||| |||||| |||| |||||| ||||    
T  2244168 cataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcacctta-ttttcataagttctccaatatag 2244070  T
Q  399 ctta---taaaacaacttatagc 418  Q
    ||||   ||||||||||||||||    
T  2244069 cttatattaaaacaacttatagc 2244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 20109678 - 20109622
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    |||||||| ||||||||||||||| ||||  ||||||||| ||||| ||| ||||||    
T  20109678 gagaacttttgaaaacagcttatgacatttttcataagtttttttctgctgattttt 20109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 22471381 - 22471349
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacag 340  Q
    |||||||||||| ||||||||||||||||||||    
T  22471381 tgtgagactgtttgggagaacttatgaaaacag 22471349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 377
Target Start/End: Complemental strand, 24929579 - 24929532
Alignment:
Q  329 ttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||| |||||||||||||||| | |||||| |||||||||||||||||    
T  24929579 ttatggaaacagcttatggcat-gttcataaattgttttcagcttattt 24929532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 28615486 - 28615384
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| |||||||||||| || ||| || |||||||||   | ||||||| ||||  ||||||||||||||||||||| ||| ||||  |||||||||    
T  28615486 ctgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgtt-tggagaacttatgaaaacagctaatgacatt-ttcataagtt 28615389  T
Q  363 gtttt 367  Q
    |||||    
T  28615388 gtttt 28615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 403
Target Start/End: Complemental strand, 56249640 - 56249538
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||||| |||| || | ||||||| ||||||||||||| ||||  ||||||| | |||||| |||| |||||  |||||||||||  |||    
T  56249640 cataagttttgtgagattgtttggaacaacttatcaaaacagcttatgacatt-ttcataagcttttttcaactta-ttttcttaagtcctccaatgtag 56249543  T
Q  399 cttat 403  Q
    |||||    
T  56249542 cttat 56249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 272 - 449
Target Start/End: Complemental strand, 33678924 - 33678747
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| ||||||| | |||| || || ||||||||| ||||||||  || ||||||||||||||||||| |||||  ||||| |||| || |||||||| |    
T  33678924 attggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaac 33678825  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||| |||||||||||  ||||||||||||||| |||||| ||||||||||  |||||||| ||||||||||| ||||||    
T  33678824 tta-ttttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactttactttatc 33678747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 278 - 448
Target Start/End: Original strand, 33601342 - 33601511
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| ||  | ||||||||| ||||||||| ||   |||||||||||||||||||||||| || |  ||||||| | |||||||||||  |    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaat 33601441  T
Q  378 ttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    | || |||| ||| |||||||||||||||||||||||||||  | |||||||  |||||||||||||||||    
T  33601442 t-cataagttctctaagatagcttataaaacaacttatagcaaatacaaaaataatttaactttattttat 33601511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 34036069 - 34035931
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||||||||||||||||||||||| || ||  |||| ||  |||||||||  | || |||||||||||||| | |||||| ||||| ||||||||||    
T  34036069 ctgtttgaattgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttg 34035970  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||| |||| ||||| ||||| ||| ||||||||||||    
T  34035969 ttttcaactta-ttttcgcaagttctctaagatagcttat 34035931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 323 - 449
Target Start/End: Complemental strand, 39968013 - 39967887
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||  ||| |||  ||||||||||| ||||||||||||||||      
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaactta-ttttcattagttctctcagatagcttatgaaaacaacttatagctag 39967915  T
Q  422 cacaaaaacgatttaactttattttatc 449  Q
     || ||||| |||||| |||||||||||    
T  39967914 tacgaaaacaatttaagtttattttatc 39967887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 449
Target Start/End: Complemental strand, 48470161 - 48470011
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| | ||||| |||| |||||||||||||||||||||||||||||||  ||||||| | |||| |||||| | |||| ||||  | ||| ||||    
T  48470161 cataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagctta-tgttcataagttattcaaaatag 48470063  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| |||||||||||||   || |||||||| ||||||||| ||||||||    
T  48470062 cttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatc 48470011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 36517729 - 36517593
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||| | |||||||||||||||| || ||||||||| | | |||||||| |||||||||||| |||||||||  || ||||| ||||||| |     
T  36517729 ctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagcta 36517632  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||||| ||| |||||| || | ||||||||||||||||    
T  36517631 ttttcagttta-ttttcataatttctccaagatagcttat 36517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 346
Target Start/End: Original strand, 19302476 - 19302563
Alignment:
Q  259 agaaactgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| ||||||||||||||||||||||||||| || ||  |||||||| ||||||| | || ||||||| ||||||||||||||||||    
T  19302476 agaacctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatg 19302563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 349
Target Start/End: Original strand, 4970710 - 4970795
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggca 349  Q
    ||||||| ||||||||||||||||||| ||  |  |||||||  |||||||||||| ||||||||||||||||||| |||||||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggca 4970795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 449
Target Start/End: Complemental strand, 20526597 - 20526413
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||||||| ||| ||  | | | || || |||||||||||| | |||||||||||||||||| ||||  ||||  || |||| |||    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||| |||||| ||||||  ||| |||||| ||||||||| |||||| |||||||| |  ||||| |  ||||||||||||||||||    
T  20526497 ttttagctta-ttttcattagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaactttattttatc 20526413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 418
Target Start/End: Original strand, 19022542 - 19022657
Alignment:
Q  303 agttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctta 402  Q
    |||| ||||||| |||| ||||||| ||||||||||| |||||| || |  ||||||||||| |||| |||| |||||| |||| |||||| ||||||||    
T  19022542 agttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaactta-ttttcataagttctccaatatagctta 19022640  T
Q  403 t-aaaacaacttatagc 418  Q
    | |||||||||||||||    
T  19022641 taaaaacaacttatagc 19022657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 34744180 - 34744014
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||||||||| | ||||||||||| || ||| |||||| | |||||||||||| || |||||| ||||||| | |||||| || |  ||| ||| |     
T  34744180 ctgtttgaattgaataatttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagctt 34744081  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    |||||  ||||||||| | |||| |||||| ||||||||| ||||||||||||| | || ||||||||    
T  34744080 ttttcgccttattttt-ataagttctccaatatagcttatgaaaacaacttataccatatacaaaaac 34744014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 445
Target Start/End: Original strand, 17944261 - 17944442
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| | |||||||||| |||||| || || ||||||| | ||||||||||||   || ||||||| ||||||||||||| || |  ||||| | |     
T  17944261 ctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatatgctt 17944360  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    |||||||||||  ||||| || |  ||||||||| ||||| ||||||||||| | | || |||||||| ||||||||||||||    
T  17944361 ttttcagctta-atttcataaattatccaagataacttatgaaaacaacttacaacatatacaaaaacaatttaactttattt 17944442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 407
Target Start/End: Original strand, 21568416 - 21568555
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| ||||||| |||||||||   ||||||  || |||||||||||| |||||||||||||||||||||||||  || |  ||||||| |     
T  21568416 ctgtttgcattgccttatttcagcttagct---agcatatattttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctc 21568512  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    |||||| ||||  || || |||| |||||| |||||||||||||    
T  21568513 ttttcaactta-gttccataagttctccaatatagcttataaaa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 445
Target Start/End: Original strand, 37064386 - 37064563
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||||||||||||| |||| || ||   ||||||||||| ||| |||||||||| ||||||||||||  |||| | ||||  |||||| |      
T  37064386 ctgtttggattgacttatttgatcttatctactgatataagttctgttagattgttcgggagcacttatgaaaaccacttacgacatt--tcataaat-- 37064481  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||||||||| |||||| |||||||| || ||||||||  |||||| |||||||| ||   |||||| |||||||| |||||    
T  37064482 ttttcagctta-ttttcataagtcctctaaaatagcttacgaaaacagcttatagcatatgtaaaaacaatttaactgtattt 37064563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 437
Target Start/End: Original strand, 33601963 - 33602117
Alignment:
Q  282 ttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttca 381  Q
    ||||||||| || || ||||||||| | ||||||| ||   || ||||||||||||||||||||| || |  |||||||   |||||||||||  || ||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaatt-ca 33602061  T
Q  382 caagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaa 437  Q
     |||| ||| ||||||||||||||||| |||||||||  | |||||||| ||||||    
T  33602062 taagttctctaagatagcttataaaaccacttatagcaaatacaaaaacaatttaa 33602117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 44989627 - 44989710
Alignment:
Q  296 tagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtttt-cagcttatttt 378  Q
    ||||||||||| |||||||||||| |||| |||||||||||||| ||| || ||||| ||| ||| |||||| |||||||||||    
T  44989627 tagcataagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttatttt 44989710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 448
Target Start/End: Complemental strand, 5947276 - 5947153
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttac 422  Q
    ||||||| ||||| ||||||||||||||  ||||||| | ||||||||||| |||||| || | |||| ||||||||||| || ||| ||||||| |||     
T  5947276 agaacttttgaaaccagcttatggcatttttcataagctcttttcagctta-ttttcataacttctcctagatagcttatgaatacagcttatag-ttat 5947179  T
Q  423 acaaaaacgatttaactttattttat 448  Q
    ||||| ||  ||||||||||||||||    
T  5947178 acaaatacagtttaactttattttat 5947153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 407
Target Start/End: Original strand, 25670511 - 25670646
Alignment:
Q  271 aattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttca 369  Q
    |||||||||| ||||||||| ||  |  |||||| ||| ||||||||||| | || |||||||||||||| |||||| || || | |||| |||||||||    
T  25670511 aattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgaca-tgttaataaattgttttca 25670609  T
Q  370 gcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||| ||||||||||  ||||||||||  ||||||||    
T  25670610 gctta-ttttcacaagctctccaagatatgttataaaa 25670646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 403
Target Start/End: Complemental strand, 9050742 - 9050649
Alignment:
Q  307 ctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||||||||||||   |||||||||||||||||| |||| || || |||||| || ||||||||||| ||||||||||| ||||||||||| ||||    
T  9050742 ctgtgagactgttcaaaagaacttatgaaaacagcatatgtca-tgttcataa-tttttttcagctta-ttttcacaagttctccaagatagtttat 9050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 446
Target Start/End: Complemental strand, 17248656 - 17248525
Alignment:
Q  312 agactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaa 410  Q
    |||||||| |||||||||||| ||||||||||||  ||||| ||||||| || ||| | |||| |||||| |||| ||| |||||  ||||| |||| |     
T  17248656 agactgtttgggagaacttataaaaacagcttataacattgttcataagctgattt-acctta-ttttcataagttctctaagat--cttatgaaaagag 17248561  T
Q  411 cttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||| |||||||| |||||||||| ||||    
T  17248560 cttatagcttatacaaaaacaatttaactttttttt 17248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 403
Target Start/End: Original strand, 28691754 - 28691891
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataag-ttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||||||||||||||| ||| || ||| ||||||  | ||||||||||||| ||||| ||||||||||||||||||| | |||  ||||| ||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttc-ggagatcttatgaaaacagcttatgac-ttgtccataaatt 28691851  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||| |||| ||| |||||| |||  ||||| ||||||||||    
T  28691852 gttatcagttta-ttttcataagatctccaggatagcttat 28691891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 300 - 447
Target Start/End: Complemental strand, 39907917 - 39907772
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagc 399  Q
    ||||||| |||||||||||| | |||||||| | |||  ||||||| ||| || |||| || ||||||||||||| ||||||  ||| ||| |||||||     
T  39907917 ataagttttgtgagactgtttgagagaacttgtaaaatgagcttat-gca-tgttcattagctgttttcagctta-ttttcattagttctctaagatagt 39907821  T
Q  400 ttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||| ||||||  |||||||||| |||||||| ||||||| ||||||||    
T  39907820 ttatgaaaacagtttatagcttatacaaaaacaatttaaccttatttta 39907772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 20526882 - 20526961
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||| || |||||||||||| | ||||||| ||||||||||||||||  |||| | ||||| | |||||||||||||||    
T  20526882 cataaattttgtgagactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttatttt 20526961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 25596184 - 25596047
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| | ||||||||||||||||| || | ||||||||   ||||||| |||| |||| ||| ||| ||||||||||||| ||  | |  |||||||    
T  25596184 ctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatgaca-agttactaagttg 25596086  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||| |||| |||||| |||  ||||||||||||||||    
T  25596085 ttttcaactta-ttttcataagctctccaagatagcttat 25596047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 30496797 - 30496743
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||| |||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  30496797 gagagcttatgaaaacagcttatggca-tgcccgtaagttgttttcagcttatttt 30496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 419
Target Start/End: Complemental strand, 9038216 - 9038109
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    ||||| ||||| | ||||||||| ||||||||||||| || || |||||| |||||||||||||| ||||||||||| ||||| ||||| |||| |||||    
T  9038216 tgagaatgttcagaagaacttataaaaacagcttatgaca-tgttcataa-ttgttttcagctta-ttttcacaagttctccatgatagtttatgaaaac 9038120  T
Q  409 aacttatagct 419  Q
    |  ||||||||    
T  9038119 agtttatagct 9038109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 12110401 - 12110327
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| |||| || ||||||||||||| |||||| ||||||||||| || ||||| |||| |||||||||||||    
T  12110401 ttttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatc 12110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 27863656 - 27863722
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    |||||||||||||| |  || ||||||||| ||||||||| || | |||||||||||||||||||||    
T  27863656 cttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagctt 27863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 44822019 - 44821930
Alignment:
Q  356 ataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    |||||||||||||| |||| |||||| |||| |||||  ||||||||| |||||| |||||| |||| |||||||| |||| |||||||||    
T  44822019 ataagttgttttcaactta-ttttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 5947393 - 5947280
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| ||  | | ||||||| | |||||||||| || ||||||| ||||| ||||||||| ||||  ||||| | |     
T  5947393 ctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcatatgctt 5947294  T
Q  364 ttttcagcttattt 377  Q
    ||| ||||||||||    
T  5947293 tttacagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 13960933 - 13960884
Alignment:
Q  399 cttataaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    |||| |||||||||||||| ||| |||||||| |||||||||||||||||    
T  13960933 cttaaaaaacaacttataggttatacaaaaacaatttaactttattttat 13960884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 20553210 - 20553142
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| ||||| |||||| |||||||||| | || || ||||||||||||||||| ||||||    
T  20553210 tgtgagactgttcaggagagcttatggaaacagcttacgaca-tgttcataagttgttttcagattattt 20553142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 33894734 - 33894666
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||| | |||| |||||||||||||| |||| |||  | |||||||||||||||||||||||    
T  33894734 tgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtc-cataagttgttttcagcttattt 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 403
Target Start/End: Original strand, 38499878 - 38499969
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||| || |||||||||| | ||||||||||||| ||||  ||||||| | ||| ||||||| |||||| |||| ||||||||| ||||||    
T  38499878 gagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagctta-ttttcataagttctccaagattgcttat 38499969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 3308205 - 3308284
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattg-ctcataagttgttttcagcttatttt 378  Q
    ||||||| | || ||||||| |||||||||| |||||| |||||||| ||||  |||||||| | |||||||||||||||    
T  3308205 ataagttttatgtgactgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttatttt 3308284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 341
Target Start/End: Original strand, 19214358 - 19214401
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagc 341  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||    
T  19214358 gcataagttttgtgagattgtttgggagaacttatgaaaacagc 19214401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 20234613 - 20234546
Alignment:
Q  263 actgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaactt 330  Q
    ||||||| ||||| ||||||||||||||  | || ||||||||| ||||||||| || ||||||||||    
T  20234613 actgtttcaattggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaactt 20234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 40252128 - 40252210
Alignment:
Q  367 tcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||| || |||| |||||||||| ||||| |||| | |||||| | || ||||||||||||||||||| |||||||    
T  40252128 tcagcttatttt-cataagttctccaagataacttatgaaaagagcttataacatatacaaaaacgatttaactttgttttatc 40252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 449
Target Start/End: Original strand, 22283754 - 22283847
Alignment:
Q  356 ataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| ||||||||||||||||  || |||| ||| ||||| | |||| ||||||  |||||||| | |||||||| ||||||||||||||||||    
T  22283754 ataagctgttttcagcttatttc-cataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatc 22283847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 22387859 - 22387901
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcat 350  Q
    |||||||||||| |||||| |||||||||||| ||||||||||    
T  22387859 tgtgagactgtttgggagagcttatgaaaacaacttatggcat 22387901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 40252041 - 40252083
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagtt 306  Q
    |||||||||||| |||||||||||||| || ||||||||||||    
T  40252041 ctgtttgaattggcttatttgagcttatctactagcataagtt 40252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 47130802 - 47130855
Alignment:
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    ||||||| |||||||| ||||||| |||||||||||||||| |||||||||||||    
T  47130802 gttttcaacttatttt-cacaagttctccaagatagcttatgaaaacaacttata 47130855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 351
Target Start/End: Original strand, 3836604 - 3836689
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcatt 351  Q
    |||| |||| |||||||||||||| || || || ||||  || |||| |||||| ||||||||||||||||| |||||||| ||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacatt 3836689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Complemental strand, 30180063 - 30180018
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| ||||||||||| || ||||| ||||||||||||||||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatc 30180018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 34083583 - 34083628
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| ||||||||||| ||| |||| ||||||||||||||||||    
T  34083583 aaaacagcttatagcttatacacaaacaatttaactttattttatc 34083628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 45338505 - 45338417
Alignment:
Q  359 agttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    |||| |||||| |||||||| ||  ||| |||||| |||||||| ||||||||||| ||| || |||||||| ||||||  |||||||||    
T  45338505 agtttttttcaacttatttt-catcagttctccaatatagcttaaaaaacaacttacagcatatacaaaaacaatttaaggttattttat 45338417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 45338602 - 45338537
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttat 332  Q
    |||| |||| |||||||||| ||| |  |||||||||||| | |||||||||| ||||||||||||    
T  45338602 tttggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaacttat 45338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 407
Target Start/End: Complemental strand, 45593645 - 45593537
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataag-ttgttttcagcttatttttcacaagtcctccaagata 397  Q
    |||||| | |||||||||||| |||||||||||| |||||| || ||| ||||  ||||||| || ||| ||| ||| |||||  |||| ||||||||||    
T  45593645 cataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataagcttttttccagttta-ttttcgtaagttctccaagata 45593547  T
Q  398 gcttataaaa 407  Q
    ||||| ||||    
T  45593546 gcttagaaaa 45593537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 343
Target Start/End: Complemental strand, 48140321 - 48140276
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    ||||||||| |||||||||||| |||||||  ||||||||||||||    
T  48140321 gcataagttatgtgagactgtttgggagaatgtatgaaaacagctt 48140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 6226141 - 6226188
Alignment:
Q  330 tatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||| || ||| ||| |||||||||||||||||||||||||||    
T  6226141 tatgaaaacaactaatgtcat-gctcataagttgttttcagcttatttt 6226188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 370
Target Start/End: Original strand, 7241316 - 7241360
Alignment:
Q  326 aacttatgaaaacagcttatggcattgctcataagttgttttcag 370  Q
    |||||||||||||  |||||| ||||| |||||||||||||||||    
T  7241316 aacttatgaaaacgacttatgacattgttcataagttgttttcag 7241360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 403
Target Start/End: Complemental strand, 7244745 - 7244694
Alignment:
Q  351 tgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||||||||||||||||||||| |||||| |||  |||||| |||||||||    
T  7244745 tgctcataagttgttttcagctta-ttttcataagctctccaatatagcttat 7244694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 18765422 - 18765366
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatga 334  Q
    ||||||||||||| ||  |  |||||||| |||||||||||| ||||||||||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaacttatga 18765366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 342
Target Start/End: Complemental strand, 21196406 - 21196342
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagct 342  Q
    |||||||||||||  | |||||||||||| ||||||||||||  | |||| ||||| ||||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct 21196342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 39280060 - 39279929
Alignment:
Q  318 ttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    |||| |||| ||||| |||||||||||| |||||   |||||| | ||||||||||| |||||| |||| ||||||||||  |||| ||| || | ||||    
T  39280060 ttcgagagagcttataaaaacagcttatagcattttacataagcttttttcagctta-ttttcaaaagttctccaagataatttatgaaatcagcctata 39279962  T
Q  417 gcttacacaaaaacgatttaactttattttatc 449  Q
     | || ||| |||| ||||||||| ||||||||    
T  39279961 acatatacacaaacaatttaacttaattttatc 39279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 449
Target Start/End: Original strand, 40688994 - 40689089
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaa-acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| |||||| |||||||||| || ||||  |||| |||||||||| || ||| ||||||||||| |  ||||  ||||||||||||||||||    
T  40688994 tcataagctgttttgagcttatttt-cataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatc 40689089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 43219623 - 43219674
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||| ||||||||||||| || || ||||||| |||||||||||||||    
T  43219623 agaacttatcaaaacagcttatgaca-tgttcataagctgttttcagcttatt 43219674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 378
Target Start/End: Complemental strand, 46082141 - 46082074
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||   |||| |||||||||||| |||||| |||  | ||||||||||||||||||||||||    
T  46082141 tgagactgttaatgagagcttatgaaaacaacttatgacatgac-cataagttgttttcagcttatttt 46082074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 443
Target Start/End: Original strand, 46280301 - 46280369
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    |||||| |||| |||||| ||||||||| |||||| |||||||| || |||||||| |||||| |||||    
T  46280301 ttttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaatttaaatttat 46280369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 267 - 378
Target Start/End: Original strand, 32840907 - 32841018
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||||||||||||| ||||||||| || ||  || ||||| || ||||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||    
T  32840907 tttgaattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttt 32841006  T
Q  367 tcagcttatttt 378  Q
    ||||||||||||    
T  32841007 tcagcttatttt 32841018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 10758176 - 10758358
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    ||||||||||||||||||||| |||| || ||| |||||||| |||||||||||| |  |||| |||||||||||||||||| || |  ||| ||| | |    
T  10758176 tgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttt 10758275  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttataaa-acaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    |||||||||  |||||| ||||   | || |||||||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  10758276 tttcagctt-gttttcataagt-tgctaatatagcttataaagacaacttatagcatatacaaaaacaatttaactttattttat 10758358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 30251372 - 30251524
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || ||  ||||||||  ||||||||||| ||||||||||| ||||||||||||| |||||  ||||||| |     
T  30251372 ctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctt 30251471  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    ||| ||||||| |||||| ||||  ||||||||||||||| |||||| ||||||    
T  30251472 tttacagctta-ttttcataagtggtccaagatagcttatgaaaacagcttata 30251524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 9956791 - 9956889
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||||| || ||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||| |||| ||||||||||||| ||||    
T  9956791 gagaacttatgaaaatagtttatggcattgttcataagtagttttcagctta-ttttcataagttctccaagatagattatgaaaacaacttataactta 9956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 298 - 448
Target Start/End: Complemental strand, 26771383 - 26771233
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| || |  ||| |||   |||||| |||| |||||| |||| ||| || |||    
T  26771383 gcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaactta-ttttcataagttctctaatata 26771285  T
Q  398 gcttataaaacaa-cttatagcttacacaaaaacgatttaactttattttat 448  Q
     ||||||||| || |||||||| || |||||||| |||||| ||||||||||    
T  26771284 tcttataaaaaaagcttatagcatatacaaaaacaatttaagtttattttat 26771233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 440
Target Start/End: Complemental strand, 27028971 - 27028807
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    ||||||||||| ||| |  || |||||||||  |||||| |||| ||||||| || ||||||||||||| | ||||  ||||||| | |||||||||||     
T  27028971 acttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagctta- 27028873  T
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
    |||||| |||  |||||||||||||||| |||||| |||||||| || ||| |||| |||||||||    
T  27028872 ttttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaacaatttaactt 27028807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 449
Target Start/End: Original strand, 35534541 - 35534714
Alignment:
Q  274 tgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagctt 373  Q
    ||||||||||||||||| || ||| |||||||| |||||||||||| | |||||||| ||||||||||||||| || |  | | ||| | ||||| ||||    
T  35534541 tgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaagcttttttcggctt 35534640  T
Q  374 atttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |  ||||| |||| |||||| ||| ||||| |||||||| |||| |  | |||||||| ||||||||||||||||||    
T  35534641 a-ctttcataagttctccaatataacttatgaaaacaacatataac--atacaaaaacaatttaactttattttatc 35534714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 1057997 - 1058126
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||||| || |||||||||||||| || ||  |||||||| |||||||||||| |||||||||| ||||||| ||||||| ||||  |||| |||| ||    
T  1057997 gtttgaactggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattagtt-tt 1058095  T
Q  366 ttcagcttatttttcacaagtcctccaagata 397  Q
    ||| ||||| |||||| |||| ||||||||||    
T  1058096 ttccgctta-ttttcataagttctccaagata 1058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 416
Target Start/End: Complemental strand, 1930152 - 1930035
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||| | | || |||||||||| ||||||||| ||||| ||||| ||||||| ||||||||||||| ||||||||||  | |||||||||    
T  1930152 cataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagctta-ttttcacaaggtcaccaagatag 1930054  T
Q  399 cttat-aaaacaacttata 416  Q
    ||||| |||||| ||||||    
T  1930053 cttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 449
Target Start/End: Complemental strand, 38602479 - 38602300
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||||||||||||||||| || ||  |||||||| |||||| ||||| ||||||||||||  |||||||||||     | |||| ||| ||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat--aaacagcttat----ctactcacaagctg 38602386  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| ||||| ||||||||| | |||||  ||||||||| |||||| |||||||| ||  ||||| | ||||||||| ||||||||    
T  38602385 ttttcggctta-ttttcacaaattctccagtatagcttataaaaacagcttatagcatatgcaaaagcaatttaacttcattttatc 38602300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 404
Target Start/End: Original strand, 3536871 - 3537002
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| |||||||||||||| || || ||||||| | |||| |||| |||| ||||| |||   |||||||||||| ||||| |||||| |||||||||||    
T  3536871 attgtcttatttgagcttatctactggcataagctttgtgtgactattcgagagaatttacagaaacagcttatgacattgttcataaattgttttcagc 3536970  T
Q  372 ttatttttcacaagtcctccaagatagcttata 404  Q
    ||| ||| || |||| |||||||||| ||||||    
T  3536971 tta-tttccataagttctccaagatatcttata 3537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 38648468 - 38648322
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| |||||||||||| |||||| ||||||||||||||| ||| || | |||||||| | |||| ||| ||  ||||| |||| || ||||||||    
T  38648468 cataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataagcttttttaagcgta-atttcataagttctacaagatag 38648370  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||| ||||||||| ||| | || |||||||| | |||| |||||||    
T  38648369 cttatgaaaacaactcataacatatacaaaaacaagttaattttattt 38648322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 445
Target Start/End: Complemental strand, 18133800 - 18133627
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| ||||||| |||||| || |||| ||||||| |||||||||||| |||||| ||| ||||| ||||||||  || |  ||| ||| | ||||||||    
T  18133800 attggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagc 18133701  T
Q  372 ttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||| |||||| |||| |||||| |||| |||||||| || |||||||  || |||||| | ||||||||| ||||    
T  18133700 tta-ttttcataagttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaacttcattt 18133627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 266 - 403
Target Start/End: Original strand, 31716147 - 31716283
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    |||||||||  |||||||||||||| ||  | |||||  || | ||||||||||  ||||||||| ||||||||||||||| ||||  ||||||| | ||    
T  31716147 gtttgaattagcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagctttt 31716246  T
Q  366 ttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||||||||| | | || | ||||||||||||||||    
T  31716247 ttcagcttatttct-ataacttctccaagatagcttat 31716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 403
Target Start/End: Original strand, 43717855 - 43717993
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttat---ggcattgctcataagttg 363  Q
    |||| |||| |||||||||||||| ||  |  |||||||| ||||||||| || ||||||||||||||||||||  |||   | ||| ||||||||| ||    
T  43717855 tttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctcataagctg 43717954  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||| ||||||  ||||| |||| ||||||||||||||||    
T  43717955 tttttagctta-ctttcataagttctccaagatagcttat 43717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 43045643 - 43045723
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||||| |||| ||||||| |||||| || |||||||||| | ||||||||||||  ||||| |||||||||||||||||    
T  43045643 ctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagctta 43045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 448
Target Start/End: Original strand, 7918789 - 7918875
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||||||||||||||||  ||||||  || ||||||||||||| ||||||||||||||||||||  ||||  |||||||||||||||||    
T  7918789 tgttttcagcttatttc-cacaagctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttattttat 7918875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 439
Target Start/End: Complemental strand, 10120859 - 10120733
Alignment:
Q  313 gactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaac 411  Q
    ||||||| | |||||||||||||||||||||||| ||||  ||||| | ||||||||||||| |||||| |||| |||||| |||| | ||  ||||| |    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagctta-ttttcataagttctccaatatagttaatgtaaacagc 10120761  T
Q  412 ttatagcttacacaaaaacgatttaact 439  Q
    |||||| ||| || ||||| ||||||||    
T  10120760 ttataggttataccaaaacaatttaact 10120733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 417
Target Start/End: Complemental strand, 27754520 - 27754403
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||||||| || |||||||||||||||||||| ||||| || || | ||||||||  ||||||||| |||||| |||  |||||| ||||    
T  27754520 cataagttttgtgagactatttgggagaacttatgaaaacagtttatgaca-tgattataagttgcgttcagctta-ttttcataagctctccaaaatag 27754423  T
Q  399 cttat-aaaacaacttatag 417  Q
    ||||| ||||| ||||||||    
T  27754422 cttatgaaaaccacttatag 27754403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 36963272 - 36963351
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    ||||||| |||| |||||||||||| | || || ||||||||| |||||||||||| |||||||||||  ||||||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagctt 36963351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 299 - 345
Target Start/End: Complemental strand, 28763485 - 28763439
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||    
T  28763485 cataagttttgtgagactgtttgggagaacttatgaaaacagcttat 28763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 33808403 - 33808341
Alignment:
Q  316 tgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||| ||||||||||||||||| ||||||||  |||| |||||||||||||| ||||||||||    
T  33808403 tgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagcttatttt 33808341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 448
Target Start/End: Complemental strand, 12976351 - 12976181
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    |||||||||||||| || |||||||||| | ||||||||||||  | ||||||||||| |||||||| |  || |  ||| ||| | |||||||||||      
T  12976351 cttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagctta-- 12976254  T
Q  377 tttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||||| |||| ||| || ||||||||| ||||||| || |||| || | ||||   |||||||||||||||||    
T  12976253 tttcataagttctctaatatagcttataaaaacaaattgtagcatataaaaaattaatttaactttattttat 12976181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 367
Target Start/End: Original strand, 40859703 - 40859803
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||| |||| |||||||||||||| || ||| |||||||| |||||| |||||  |||| |||||||||||||||||||| || |  ||||||| ||||    
T  40859703 gtttggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttggag-acttatgaaaacagcttatgacaattttcataaggtgtt 40859801  T
Q  366 tt 367  Q
    ||    
T  40859802 tt 40859803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 309 - 449
Target Start/End: Original strand, 42215270 - 42215409
Alignment:
Q  309 gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaa 407  Q
    |||| |||||| ||||||||| |||||||||||||||| | ||| ||||||| ||||||||||||||||  || |||  ||||| |||||| ||| ||||    
T  42215270 gtgacactgtttgggagaactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttattta-cataagctctccaggatagcatatgaaaa 42215367  T
Q  408 caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
     |  |||||| ||| ||||||||  ||| |||||||||||||    
T  42215368 taggttatagattatacaaaaacagtttgactttattttatc 42215409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 11376852 - 11376741
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgtt 365  Q
    ||||||||| |||||||||||||| || ||   ||||||||| |||||||| || ||||||||||||||||| ||||| || || || | |||  |||||    
T  11376852 tttgaattggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgaca-tgttaatatcttgtt 11376754  T
Q  366 ttcagcttatttt 378  Q
    |||||||||||||    
T  11376753 ttcagcttatttt 11376741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 451
Target Start/End: Original strand, 16825512 - 16825642
Alignment:
Q  320 cgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttata-aaacaacttatagc 418  Q
    |||||||||||||||||| |||||||| || |  ||||||| | |||||| |||||||| || |||| |  ||| ||||||| || |||||||||||| |    
T  16825512 cgggagaacttatgaaaatagcttatgacaattttcataagct-ttttcaacttatttt-cataagttcggcaatatagcttgtagaaacaacttataac 16825609  T
Q  419 ttacacaaaaacgatttaactttattttatcct 451  Q
     || |||||||| ||||||| ||||||||||||    
T  16825610 gtaaacaaaaacaatttaacattattttatcct 16825642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 449
Target Start/End: Complemental strand, 10114582 - 10114457
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||||||| |||||  ||||  ||||| | ||||||||||||| |||||| | || |||||| |||||| || |||||| |||||||||||    
T  10114582 gagaacttatgaaaacaacttataacatttatcatatgctgttttcagctta-ttttcatatgttctccaatatagctaatgaaaacagcttatagctta 10114484  T
Q  422 cacaaaaacgatttaactttattttatc 449  Q
     || ||||| ||| ||| ||||||||||    
T  10114483 taccaaaacaattcaac-ttattttatc 10114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 449
Target Start/End: Complemental strand, 34849243 - 34849070
Alignment:
Q  277 cttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagc-ttatggcattgctcataagttgttttcagctta 374  Q
    ||||||||||||||||| || |||||||| | | |||||||||| ||||||||| ||||||||| | ||||| || || |||||||  |||||||||| |    
T  34849243 cttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactttatgaca-tgttcataagccgttttcagctga 34849145  T
Q  375 tttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
     ||| || |||| || ||||| ||||||| | |||| |||||| |||| |||||||  || | |||||||||||||    
T  34849144 -tttccataagttctacaagaaagcttatgataacagcttatatcttatacaaaaataatgtgactttattttatc 34849070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 429
Target Start/End: Original strand, 29168019 - 29168140
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctta-taaa 406  Q
    |||||||||||| |||||||||||| ||||||| ||||| ||||  |||||| |  || |||||||| ||| || |||| ||||||||||||| |  |||    
T  29168019 tgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagctta-tttccataagttctccaagatagctcaggaaa 29168117  T
Q  407 acaacttatagcttacacaaaaa 429  Q
    ||| |||||||| || |||||||    
T  29168118 acagcttatagcatatacaaaaa 29168140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 30918219 - 30918152
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||| | |||| |||||||||||| ||| || ||||  ||||||||||||||||||||||||    
T  30918219 tgtgagactgtttgagagagcttatgaaaacaacttgtgacatt--tcataagttgttttcagcttattt 30918152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 378
Target Start/End: Original strand, 35643914 - 35644020
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| |||||||| ||||| || || |||||| || |||||||||||| |||| |||||||||||| || ||||| || |  ||||||| | |||||| |    
T  35643914 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 35644013  T
Q  372 ttatttt 378  Q
    |||||||    
T  35644014 ttatttt 35644020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 449
Target Start/End: Complemental strand, 2482970 - 2482832
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    |||||||||||| ||||||||||| ||||||| || | |  |  | ||||||| |||||||||||||||| | | ||||  ||||||||||| |  ||||    
T  2482970 tgtgagactgtttgggagaacttaagaaaacaactcacgataa-gttcataagctgttttcagcttatttct-ataagttatccaagatagcatg-aaaa 2482874  T
Q  408 caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || ||||||||||| ||||||||  ||| |||||||||||||    
T  2482873 cagcttatagcttatacaaaaacattttgactttattttatc 2482832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 12496993 - 12497066
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacag 340  Q
    |||| ||||| ||||||||||||| || || ||||||||| |||||||||||| | |||||||| | |||||||    
T  12496993 tttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaacttctaaaaacag 12497066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 420
Target Start/End: Complemental strand, 43504858 - 43504747
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||| |||||||  |||||||| ||||||||| |||| | | ||| | ||||| ||||||||||||||||  || |||| |||||||||||||||| |||    
T  43504858 tgtgtgactgtttcggagaactgatgaaaacaacttacgac-ttgtttataagctgttttcagcttatttc-cataagttctccaagatagcttataaaa 43504761  T
Q  407 acaacttatagctt 420  Q
    ||| ||||||||||    
T  43504760 acatcttatagctt 43504747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 445
Target Start/End: Original strand, 37353265 - 37353348
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||||||| ||||||| || |||  ||| |||||||||||  |||||| |||||||| ||||||||||| ||||||||||||||    
T  37353265 tgttttcagattatttt-cataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaactttattt 37353348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 403
Target Start/End: Original strand, 44236741 - 44236879
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| |||  |||||||||| ||| || || |||||||  || |||||||||||||||||||  |||||||| |||| | | || ||||| ||||||    
T  44236741 ctgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaatagctcacgaca-tgctcttaagtt 44236839  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
     ||||||||||| |||||| |||  |||||| |||||||||    
T  44236840 attttcagctta-ttttcataagctctccaatatagcttat 44236879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 377
Target Start/End: Original strand, 2458543 - 2458597
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||||| ||||||||||||| || ||||||| ||||||||| ||||||    
T  2458543 ggagaacttatgaagacagcttatggca-tgttcataagctgttttcagtttattt 2458597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 6882044 - 6882001
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagct 342  Q
    |||||||| |||||||||||| |||||||| |||||||||||||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagct 6882001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Complemental strand, 13459749 - 13459683
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||| ||| ||||||||||||||||||||||||| ||||  ||||||  |||||||||| ||||||    
T  13459749 gagacttttcaggagaacttatgaaaacagcttatgacatt-ttcataaactgttttcagcctatttt 13459683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 16162912 - 16162829
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| |||| |||||||||| ||| || |||||||||   || ||||||||||| | || |||||||||||||||||||||    
T  16162912 ctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatg 16162829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 346
Target Start/End: Original strand, 42043308 - 42043355
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||| | ||||||||||||||||||| |||| ||||||||||||    
T  42043308 cataagttttatgagactgttcgggagaacatatggaaacagcttatg 42043355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 457
Target Start/End: Original strand, 42215090 - 42215192
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaactttattttatcctat 453  Q
    ||||||||||||||||||||| ||| || |||  |||||||||||||||| |||  | |||||| | | || ||||| |||| ||||||||||| | |||    
T  42215090 tcataagttgttttcagctta-tttacataagctctccaagatagcttatgaaaatatttatagatgatacgaaaacaatttgactttattttagcttat 42215188  T
Q  454 gcta 457  Q
    ||||    
T  42215189 gcta 42215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 11569420 - 11569489
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||   |||| |||||| |||||||||||| ||| |  ||||||||||||||||||||||||    
T  11569420 tgtgagactgtttaagagagcttatggaaacagcttatgacat-gtacataagttgttttcagcttatttt 11569489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 12851279 - 12851214
Alignment:
Q  312 agactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||| |||| ||||||||||||||||||||  || || ||||||| ||||||| |||||||||    
T  12851279 agactgtttgggaaaacttatgaaaacagcttataaca-tgttcataagatgttttcggcttatttt 12851214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 27493089 - 27492975
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||| ||||||||||||||| || || | ||||||| ||| | | | || |||||| ||||||||||||  || || ||||| ||||||| |     
T  27493089 ctgtttggattaacttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaacaagttgtgacattgttcataagcta 27492990  T
Q  364 ttttcagcttatttt 378  Q
    |||||| ||||||||    
T  27492989 ttttcaacttatttt 27492975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 30627947 - 30628005
Alignment:
Q  392 aagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||| | |||||||||||    
T  30627947 aagataacttatgaaaacaacttatagcttacacataaacaattttattttattttatc 30628005  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 2487971 - 2488008
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  2487971 tgtgagactgtttgggagaacttatgaaaacaacttat 2488008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 3254316 - 3254264
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||| |||||||||||||| ||| | ||||||| ||||||||||||||||    
T  3254316 agaacttaagaaaacagcttatgacat-gttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 8629563 - 8629503
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttca 369  Q
    |||||||| ||| | ||||||||||||||||| |||||| || || ||||||||||||||||    
T  8629563 tgtgagaccgtttgagagaacttatgaaaacaacttatgaca-tgatcataagttgttttca 8629503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 440
Target Start/End: Complemental strand, 24558882 - 24558829
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
    |||||||||||||||| |||||||||||||||||| || ||||  |||||||||    
T  24558882 ctccaagatagcttatgaaaacaacttatagcttatacgaaaataatttaactt 24558829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 451
Target Start/End: Original strand, 25930586 - 25930659
Alignment:
Q  379 tcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    |||||||| |||||||||||||||| ||||||| ||| ||| || ||||||||  ||||| ||||||| |||||    
T  25930586 tcacaagttctccaagatagcttatgaaaacaatttaaagcatatacaaaaacattttaattttatttcatcct 25930659  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 30151214 - 30151177
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaa 336  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  30151214 cataagttttgtgagactgttagggagaacttatgaaa 30151177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 32975871 - 32975924
Alignment:
Q  392 aagatagcttataaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    |||||||||||| ||||| ||||||||||| ||||| || || |||||||||||    
T  32975871 aagatagcttatgaaacagcttatagcttatacaaacacaatctaactttattt 32975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 448
Target Start/End: Original strand, 38036153 - 38036214
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||||||||||||| || ||||||  ||||||||||||||||||| |||| | ||||||||||    
T  38036153 ctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttat 38036214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 44792807 - 44792710
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    |||||| |||| |||||||||||||| || || | |||| || ||||||||||||  ||||||||||  | |||| ||||||||| |  |||||||||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaacttagaacaacaacttatggcaattttcataagtt 44792710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 10383975 - 10383924
Alignment:
Q  325 gaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||||||||||||| ||||  ||||||| ||||| ||||||||||    
T  10383975 gaacttatgaaaacagcttatgacatt-ttcataagctgtttacagcttattt 10383924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 339
Target Start/End: Original strand, 11952303 - 11952371
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaaca 339  Q
    |||||||||||| |||| | || ||||||||||| || | |||||||||||||| |||||||| |||||    
T  11952303 attgacttatttaagctgatctactagcataagtacttgagagactgttcgggataacttatggaaaca 11952371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 14280339 - 14280455
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||||||||||||||  ||| || || ||||||||| | ||| || |||| ||| ||| |||||||||||  ||||| ||||| || ||||      
T  14280339 ctgtttggattgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaatttatgacattgttcgtaagcc 14280438  T
Q  363 gttttcagcttattttt 379  Q
    ||||| |||||||||||    
T  14280439 gtttttagcttattttt 14280455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 449
Target Start/End: Complemental strand, 21653143 - 21653048
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| | ||||||||||||||| || |||  ||||||||||||| || ||| ||| || |||| ||||| ||| | ||||||||||||||||||    
T  21653143 tcataagctattttcagcttatttt-cataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaactttattttatc 21653048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 31751533 - 31751589
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||| ||||| | |||||||||||| ||||| ||||||| | |||||||||||||||    
T  31751533 ggaggacttacgtaaacagcttatgacattgttcataagctattttcagcttatttt 31751589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 449
Target Start/End: Complemental strand, 34770915 - 34770859
Alignment:
Q  394 gatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||| |||||||||||||||||| |  ||||| |||| |||||||||||||    
T  34770915 gatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatc 34770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 264 - 407
Target Start/End: Complemental strand, 2295248 - 2295106
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||||||| |||||||||||||| || || ||||||||| |||||||||||| |||||||||||||||||||||||||| || |  ||||||| |     
T  2295248 ctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataagctc 2295149  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    | |||| |||| ||||||||||| |||  | |||||||||||||    
T  2295148 tattcaactta-ttttcacaagttctctgatatagcttataaaa 2295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 264 - 438
Target Start/End: Original strand, 3233933 - 3234107
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||||||||||||||||| ||  |  | |||||| |||||||||||| ||||||||||||||||||| |||||  || |  |||||||||     
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaac 438  Q
    |||||  |||| |||||| |||| |||||| ||||||||| ||||||||||||||| || |||||||| |||||||    
T  3234033 ttttctactta-ttttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaatttaac 3234107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 24915013 - 24915154
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||||| ||||| |||| || ||||||||||| |||||| ||||  ||||||| | |||||| |||||||| ||||||| |||||||| ||||||| |||    
T  24915013 tgtgaggctgtttgggacaatttatgaaaacaacttatgacatttttcataagcttttttcaacttatttt-cacaagttctccaagacagcttatgaaa 24915111  T
Q  407 acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||| |||||||| || |||||||| ||||||||||||||||||    
T  24915112 acagcttatagcatatacaaaaacaatttaactttattttatc 24915154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 265 - 378
Target Start/End: Complemental strand, 11941413 - 11941300
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| |||||||||||||| |||  || |||||||| ||| |||||||||||| |||||| |||||||||| |||||||  ||||| ||||||| |||    
T  11941413 tgtttgtattgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgt 11941314  T
Q  365 tttcagcttatttt 378  Q
    ||||||||||||||    
T  11941313 tttcagcttatttt 11941300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 473307 - 473133
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| ||||||||||| || || || ||||||||||||||| ||  || ||||||||||||||||| |||||||   |||  ||||||| | |||||| |    
T  473307 attggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttatacaattt-tcataagcttttttcaac 473209  T
Q  372 ttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttatttta 447  Q
    ||||||| || |||| |||||| | | ||||||||| ||||||||||| ||||| ||||| ||||||||||||||||    
T  473208 ttatttt-cataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttatttta 473133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 451
Target Start/End: Original strand, 14576572 - 14576758
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || || || ||| || ||||  |||||| |||| ||||| ||||||||||||||| || |  ||| ||| |     
T  14576572 ctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagctt 14576671  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    ||||||||||| |||||| |||| ||| || ||||||||| |||| || ||||||| || |||||||| ||||||||||||||||||||    
T  14576672 ttttcagctta-ttttca-aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaatttaactttattttatcct 14576758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 260 - 417
Target Start/End: Complemental strand, 6102309 - 6102153
Alignment:
Q  260 gaaactgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataa 359  Q
    |||| ||||| |||||||||||||||| ||| || |  |||||| || ||||||| |||| ||||||||| ||||||||||||||||  |||| ||||||    
T  6102309 gaaattgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataa 6102211  T
Q  360 gttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatag 417  Q
     |||||||||||||| ||| || || | |||| ||||||||||| |||||| |||||||    
T  6102210 attgttttcagctta-tttccataaattctcccagatagcttatgaaaacagcttatag 6102153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 344
Target Start/End: Original strand, 50644174 - 50644253
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    |||||| ||||||||||||||||||| || ||| |||| ||| |||||||||||| ||||||||||||||||||| ||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 449
Target Start/End: Complemental strand, 34290343 - 34290203
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    ||||| ||| || ||||||| |||| |||| |||||||| |||   ||||||||||||||||||||| |||||| |||| || ||||||||||||| |||    
T  34290343 tgtgaaactatttgggagaatttattaaaaaagcttatgacatat-tcataagttgttttcagctta-ttttcataagttcttcaagatagcttatgaaa 34290246  T
Q  407 acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||| ||||||||||| ||||||   | ||||||||||||||||    
T  34290245 acagcttatagcttatacaaaataaaattaactttattttatc 34290203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 421
Target Start/End: Original strand, 37842282 - 37842430
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| |||||||||||||| || ||   |||||||  |||| ||||||| | |||||||||||||||| || ||| || || |||||||  |||||||||    
T  37842282 attggcttatttgagcttatctactgatataagtttggtgacactgttcagtagaacttatgaaaacatctaatgaca-tgttcataagcagttttcagc 37842380  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||||||| | |||| || ||||||||||||| ||||||||||||||||||    
T  37842381 ttattttt-ataagttcttcaagatagcttatgaaaacaacttatagctta 37842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 373
Target Start/End: Complemental strand, 38001712 - 38001639
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagctt 373  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| |  || ||||||||||||||||||||    
T  38001712 cataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac-ctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 38503442 - 38503535
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttata 416  Q
    ||||||||||| ||||||| |||| ||||| ||||||||||||||||||||| |||||| |||| ||||||||||||| |  |||||||||||||    
T  38503442 gagaacttatggaaacagcctatgacattgttcataagttgttttcagctta-ttttcataagttctccaagatagctaacaaaaacaacttata 38503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 429
Target Start/End: Complemental strand, 49938891 - 49938734
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    ||||||||||||||| |||  |  | ||||||||| ||||||| |||| |||||||||||||||||||||||||| || |  ||| ||| | |||||| |    
T  49938891 attgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaac 49938792  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaa 429  Q
    ||| |||||| |||| ||| || ||||||||| ||||||||||||| | || |||||||    
T  49938791 tta-ttttcataagttctctaatatagcttataaaaacaacttataacatatacaaaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 29904890 - 29904789
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    |||||||||||||| || || ||||||||| |||||||||||| | |||||||||| |||||||||||||||| |  ||| ||| | |||||| ||||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttatt 29904791  T
Q  377 tt 378  Q
    ||    
T  29904790 tt 29904789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 419
Target Start/End: Original strand, 3887550 - 3887705
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||||||||||||||||  ||  | | ||||||| ||| || ||||| || |||||||||||||||| |||||| ||||| ||||||| ||    
T  3887550 ctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctg 3887649  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagct 419  Q
    |||| | |||| |||||| |||| |||| || |||||| ||||| || |||||||||    
T  3887650 tttttaactta-ttttcataagttctcctagctagcttgtaaaatcagcttatagct 3887705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 446
Target Start/End: Original strand, 17603349 - 17603484
Alignment:
Q  311 gagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa-ca 409  Q
    |||||| || ||||||||||| |||||||||||||| || |  ||||||  | ||| || |||||||| || |||| |||||| ||||||||||||| ||    
T  17603349 gagactattagggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttatttt-cagaagttctccaatatagcttataaaaaca 17603447  T
Q  410 acttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||| || |||||||| ||||||| |||||||    
T  17603448 acttatagcatatacaaaaacaatttaacgttatttt 17603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 429
Target Start/End: Complemental strand, 45975796 - 45975677
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    ||||||||||| ||||||| |||||||||||  |||  ||||  ||||||| ||||||||||||| |||||| || | |||||||||||||||| |||||    
T  45975796 tgagactgttcaggagaacatatgaaaacagtgtataacattattcataagctgttttcagctta-ttttcataaattctccaagatagcttatgaaaac 45975698  T
Q  409 aacttatagcttacacaaaaa 429  Q
    | ||| ||||||| |||||||    
T  45975697 agcttgtagcttatacaaaaa 45975677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 346
Target Start/End: Complemental strand, 5721074 - 5720995
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| |||| |||||||||||||| || || ||||||||| |||  ||||||| ||||||||||||||||||||||||||    
T  5721074 tttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatg 5720995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 272 - 378
Target Start/End: Original strand, 10199334 - 10199440
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcag 370  Q
    ||||||||||||||||||| || ||| ||||||  || |||| ||| || ||||||||| ||||||| |||||||| ||| | |||||||||||||||||    
T  10199334 attgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacat-gttcataagttgttttcag 10199432  T
Q  371 cttatttt 378  Q
    ||||||||    
T  10199433 cttatttt 10199440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 449
Target Start/End: Original strand, 51695444 - 51695597
Alignment:
Q  295 ctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaag 394  Q
    ||||| |||||  |||||||||||| || |||||||||  ||||| |||||  ||||| ||||||| | ||||||||||| |||||| || | |||||||    
T  51695444 ctagcttaagtcttgtgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagctta-ttttcataaattctccaag 51695542  T
Q  395 atagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||| |||||| || ||| |||| || ||||| |||| |||||||||||||    
T  51695543 atagcttatgaaaacatctgataacttatacgaaaacaattt-actttattttatc 51695597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 31517703 - 31517843
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||||||||||| |||||||||||| |||||| || ||| || || ||||||| ||||||||||||| |||||| |||  |||||||| || |||| ||     
T  31517703 tgtgagactgtttgggagaacttatcaaaacaactcatgaca-tgttcataagctgttttcagctta-ttttcataagctctccaagacagattatgaag 31517800  T
Q  407 acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||| ||||||||||| |  ||| | ||||||||||||||||||    
T  31517801 acagcttatagcttatatgaaatcaatttaactttattttatc 31517843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 267 - 427
Target Start/End: Complemental strand, 2778040 - 2777881
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| |||| ||||||| |||||| ||  | ||||||||| ||||||||||||  ||||||||||||||| || |||||| |  |  |||||||  ||||    
T  2778040 tttggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgac-gtattcataagccgttt 2777942  T
Q  367 tcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatagcttacacaaa 427  Q
    |||||||| |||||| |||| ||||||| || |||| ||||||| ||||||||||| |||||    
T  2777941 tcagctta-ttttcataagttctccaagttaacttattaaaacagcttatagcttatacaaa 2777881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 397
Target Start/End: Original strand, 36514606 - 36514726
Alignment:
Q  276 acttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    ||||||||||| ||| || ||  |||||||| | |||||||||| ||||||||||||||||| | |||||| ||||| | | ||| |||||||||||| |    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctt-t 36514704  T
Q  376 ttttcacaagtcctccaagata 397  Q
    |||||| ||||  |||||||||    
T  36514705 ttttcataagtaatccaagata 36514726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 399
Target Start/End: Complemental strand, 7069553 - 7069434
Alignment:
Q  279 tatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||||| || |||  || |||| ||| ||||| || || ||||||||| ||||||||||||| ||||| ||||||||| ||||||  ||| |||    
T  7069553 tatttgagcttatctactaaaattagttttgtaagactatttggaagaacttatcaaaacagcttatgccattgttcataagtttttttcaaatta-ttt 7069455  T
Q  379 tcacaagtcctccaagatagc 399  Q
    |||| ||| ||||||||||||    
T  7069454 tcactagttctccaagatagc 7069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 489339 - 489228
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| |||||||||||| || ||| || ||| ||||| || ||| ||||||||  | | |||||||||||||| |||||| |||||||||||||  || |    
T  489339 tttgtattgacttatttcagattatctactaacataatttttgtaagactgtttagaaaaacttatgaaaacaacttatgacattgctcataagaagtat 489240  T
Q  367 tcagcttatttt 378  Q
    ||||||||||||    
T  489239 tcagcttatttt 489228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 449
Target Start/End: Complemental strand, 1432632 - 1432482
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    ||||| || |||||||||||| || |||||||||||||| ||| |||| ||||| |||||||   |  | ||||||  ||||| |||| |||||||||||    
T  1432632 cataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataagacatacttagctta-ctttcataagttctccaagatag 1432534  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
     |||| ||||||| |||||||||| | |||||| ||| |||| |||||||||    
T  1432533 tttatgaaaacaatttatagcttataaaaaaacaattgaactctattttatc 1432482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 15784404 - 15784338
Alignment:
Q  341 cttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaac 408  Q
    |||||| ||||| ||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||    
T  15784404 cttatgacattgttcacaagttgtttttagcttatttt-cacaagttctccaagatagcttataaaac 15784338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 38480524 - 38480607
Alignment:
Q  296 tagcataagttctgtgagactgttcgggagaacttatg-aaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||| ||||||||| || ||||||||| ||| |||| |||||||| ||||||||||||  |||||| ||||||||||    
T  38480524 tagcataagttttgtgagactatttgggagaactaatgaaaaatagcttatgacattgctcataaactgtttttagcttatttt 38480607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 429
Target Start/End: Original strand, 7136977 - 7137081
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttac 422  Q
    ||||||||||||||  ||||||| |||   ||||||||| ||||||||||| |||||| |||| |||||||||||||||| |||||| ||||||| |||     
T  7136977 agaacttatgaaaatcgcttatgacatat-tcataagttattttcagctta-ttttcataagttctccaagatagcttatgaaaacagcttatagattat 7137074  T
Q  423 acaaaaa 429  Q
    |||||||    
T  7137075 acaaaaa 7137081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 417
Target Start/End: Complemental strand, 10744408 - 10744300
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||||||  ||| |||||||||| |||||||||||||||||| || ||||||| |||||||| ||||||||| | |||| ||| |||| ||||||| |||    
T  10744408 tgtgagagagtttgggagaacttgtgaaaacagcttatggca-tgttcataagctgttttcatcttattttt-ataagttctctaagacagcttatgaaa 10744311  T
Q  407 acaacttatag 417  Q
    ||| |||||||    
T  10744310 acagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 272 - 449
Target Start/End: Complemental strand, 13810142 - 13809965
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| |||||||| ||||| || ||  | |||||| ||||||||| ||   ||||||||||||| |||| ||||| || |  ||| ||||| || | |||    
T  13810142 attggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttcttagc 13810043  T
Q  372 ttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| ||||||| ||| || |||| |||||||| |||  |||||| || |||||||| ||||||||||||||||||    
T  13810042 ttatttt-cacaagttctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaactttattttatc 13809965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 448
Target Start/End: Original strand, 27820330 - 27820439
Alignment:
Q  339 agcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaa 437  Q
    |||||| | ||||| ||||||| | ||||||||||||||| || || | |||||||||||||||||||| || | ||||||||| ||| |||| |||||     
T  27820330 agcttacgacattgttcataagctattttcagcttatttt-cataaattctccaagatagcttataaaaacagcatatagcttatacataaacaatttag 27820428  T
Q  438 ctttattttat 448  Q
    |||||||||||    
T  27820429 ctttattttat 27820439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 449
Target Start/End: Original strand, 37631477 - 37631662
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||| | ||  |||||||||||  |||| || ||   ||| |||||||||||||||||| || || |  ||| ||| |     
T  37631477 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 37631576  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagctta-taaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||| |||||| |||| |||||| ||||||||  |||||| || ||| | ||||||||||| ||||| ||| ||||||||    
T  37631577 ttttcagctta-ttttcataagttctccaatatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatc 37631662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 38170653 - 38170722
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||||| | |||||| ||||||||||||||||||| || || |||||||||||||||||||| ||||    
T  38170653 tgtgagactgcttgggagagcttatgaaaacagcttatgaca-tgttcataagttgttttcagcttgtttt 38170722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 38247479 - 38247397
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| ||||  |||||||| |||| || || ||||||||| ||||  |||||| ||||||||||||||||||||||||||    
T  38247479 ctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 47498809 - 47498871
Alignment:
Q  316 tgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||| ||||||||||||||||| ||||||||  |||| |||||||||||||| ||||||||||    
T  47498809 tgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagcttatttt 47498871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 407
Target Start/End: Complemental strand, 5741755 - 5741616
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagt-tgtt 365  Q
    |||| |||| |||||||||||||| || || ||||||||| |||   |||||| ||||||||||||||||||| |||||| || |  |||||||| | ||    
T  5741755 tttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaat-ttcataagtatttt 5741657  T
Q  366 ttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||||| | |||||| |||| ||| || |||||||||||||    
T  5741656 ttcagctga-ttttcataagttctctaatatagcttataaaa 5741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 446
Target Start/End: Complemental strand, 10809399 - 10809315
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttataa-aacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||||||||| || |||| |||||| |||||| || | ||||||||||||||||||||||||   ||||||||||||||    
T  10809399 tgttttcagcttatttt-cataagttctccaatatagctgatgagaacaacttatagcttacacaaaaatactttaactttatttt 10809315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 374
Target Start/End: Original strand, 27146174 - 27146283
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||| ||||||||||| ||  | ||||||||| |||||||||  | || |||||||| | ||||| |||||| ||||| ||||||| |||    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgt 27146273  T
Q  365 tttcagctta 374  Q
    ||||| ||||    
T  27146274 tttcaactta 27146283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 346
Target Start/End: Complemental strand, 6557114 - 6557042
Alignment:
Q  274 tgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||||||| |||| || ||| |||||||| ||||||||| || | ||||||||||||||| ||||||||    
T  6557114 tgacttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatg 6557042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 12287154 - 12287225
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacag-cttatggcattgctcataagttgttttcagcttattttt 379  Q
    |||||||||| | |||||||||| |||||| || |||||||||||  ||||||||||||||||||||||||||    
T  12287154 tgtgagactgcttgggagaacttgtgaaaatagtcttatggcattt-tcataagttgttttcagcttattttt 12287225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 7941758 - 7941620
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| ||||  ||||||||| ||| || ||| | | |||| |||||||||||| || |||| |||||||||||||||||| ||||| ||  ||| |     
T  7941758 ctgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagcta 7941659  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||| |||| |||||| |||| |||| | |||||||||    
T  7941658 ttttcaactta-ttttcataagttctccgaaatagcttat 7941620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 417
Target Start/End: Original strand, 26779853 - 26779996
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    ||||| |||| |||||||  || |||||| |||  || |||||||||| ||||||| || |||||||| |||||| |  | |  |||||||||||||| |    
T  26779853 attgagttatctgagcttgtctactagcacaagcactttgagactgtttgggagaatttctgaaaacaccttatgaccgtac--ataagttgttttcaac 26779950  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatag 417  Q
    ||| |||||| |||| || ||||||||||||| ||||||||||||||    
T  26779951 tta-ttttcataagttcttcaagatagcttatgaaaacaacttatag 26779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 421
Target Start/End: Original strand, 28689430 - 28689529
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat---aaaacaacttatagct 419  Q
    ||||||||| | |||||||||||| |||  | |||||||||||||||||||| |||||| |||   |||||||||||||||   ||||||||||||||||    
T  28689430 gagaacttacggaaacagcttatgacatgtc-cataagttgttttcagctta-ttttcataagctttccaagatagcttatatgaaaacaacttatagct 28689527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 33204323 - 33204382
Alignment:
Q  275 gacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatga 334  Q
    |||||||||||||||| || ||  |||||||| |||||||||||| ||||||||||||||    
T  33204323 gacttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 345
Target Start/End: Original strand, 9572054 - 9572100
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||    
T  9572054 cataagatttgtgagactgtttgggagaacttatgaaaacagcttat 9572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 38018316 - 38018461
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    ||||||||| |||||||||| | |||| ||||||||||| ||| ||| | ||||| |||| || | ||||||||||||||| ||  | | ||||||||||    
T  38018316 gcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttatttt-catgaattctccaagata 38018414  T
Q  398 gcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
       ||| |||||| ||| ||||||| || ||||| ||||||||||||    
T  38018415 atgtatgaaaacagcttctagcttatacgaaaacaatttaactttat 38018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 49888808 - 49888734
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| |||| ||| |||||||||||| ||||||||| |||||||| || ||||| ||| ||||||||||||||    
T  49888808 ttttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatc 49888734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 376
Target Start/End: Complemental strand, 4549948 - 4549888
Alignment:
Q  315 ctgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||| |||||||||| ||||||||| ||||| ||| | |||||||||||||||||||||||    
T  4549948 ctgtttgggagaacttctgaaaacagattatgacat-gttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 5894154 - 5894195
Alignment:
Q  321 gggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  5894154 gggagaacttatgaaaacagcttatgtcattgttcataagtt 5894195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 446
Target Start/End: Complemental strand, 10799516 - 10799432
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttataa-aacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||||||||| || |||| ||||||  ||||| || | ||||||||||||||||||||||| |  ||||||||||||||    
T  10799516 tgttttcagcttatttt-cataagttctccaatgtagctgatgagaacaacttatagcttacacaaaagcactttaactttatttt 10799432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 299 - 441
Target Start/End: Complemental strand, 27976720 - 27976570
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt-------tcac-aagtcctc 390  Q
    |||||||| ||| |||||||| || | ||||| |||||| |||||||| ||||  ||||||| | |||||||||||||||       |||  |||| |||    
T  27976720 cataagttttgttagactgtttggaa-aacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctc 27976622  T
Q  391 caagatagcttat-aaaacaacttatagcttacacaaaaacgatttaacttt 441  Q
     |||||||||||| ||||||||||||||| || |||||||| ||||||||||    
T  27976621 gaagatagcttatgaaaacaacttatagcatatacaaaaacaatttaacttt 27976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 377
Target Start/End: Complemental strand, 35925829 - 35925729
Alignment:
Q  278 ttatttgagcttagcttctagcataagttct-gtgagactgttcgggag-aacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||||||||||||||| || |||||||  || | ||||||||  ||||| ||||||||||||||||||||| || || ||||||| |||||||| |||||    
T  35925829 ttatttgagcttagctactggcataagcgcttgagagactgtctgggaggaacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttat 35925731  T
Q  376 tt 377  Q
    ||    
T  35925730 tt 35925729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 47432147 - 47432063
Alignment:
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||||| || || | || ||| ||| ||||||||||| |||||||| ||  ||||||| ||||||||||||||||||    
T  47432147 ttttcagcttatttt-cataaattcttcaatataacttataaaacaccttatagcatattcaaaaacaatttaactttattttatc 47432063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 10808644 - 10808604
Alignment:
Q  406 aacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  10808644 aacaacttatagcttacacaaaaacactttaactttatttt 10808604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 447
Target Start/End: Original strand, 25006075 - 25006135
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||||||||||||||| |||||||||||||||||| |  ||||| |||| |||||||||||    
T  25006075 ctccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 414
Target Start/End: Original strand, 38116003 - 38116146
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggag-aacttatgaaaacagcttatggcattgctcataagttgttttcag 370  Q
    ||||||||||||||||||| || ||  | |||||| |||||||| |||  |||| ||  || ||||| |||||||| ||||| || |||||||||| |||    
T  38116003 attgacttatttgagcttatctactgacgtaagttttgtgagacggttttggagaaaaataagaaaatagcttatgacattgttcctaagttgtttccag 38116102  T
Q  371 cttatttttcacaagtcctccaagatagctt-ataaaacaactta 414  Q
    ||||  ||||| |||| |||||||||| ||| | |||||||||||    
T  38116103 ctta-ctttcataagttctccaagataacttaagaaaacaactta 38116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 7472365 - 7472287
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactt 440  Q
    ||||||||||||| |||||| |||  ||||||||||||||||  ||||| ||||||| ||| |||||||| |||||||||    
T  7472365 tgttttcagctta-ttttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaactt 7472287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 438
Target Start/End: Complemental strand, 23445363 - 23445312
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaac 438  Q
    |||||||||||||||| |||||||||||| ||||| |||||||| |||||||    
T  23445363 ctccaagatagcttatgaaaacaacttatggcttatacaaaaacaatttaac 23445312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 443
Target Start/End: Original strand, 27970246 - 27970392
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaag-tcctccaagat 396  Q
    ||||||||| ||||| ||| || |||||||||||| ||||| | ||||| ||||  ||||||| | ||||||| ||| |||||| ||| ||| | || ||    
T  27970246 gcataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagttta-ttttcataagttccccaaaaat 27970344  T
Q  397 agcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    || ||||  |||||||||||||| || |||||||| |||||| |||||    
T  27970345 agtttatggaaacaacttatagcatatacaaaaacaatttaattttat 27970392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 343
Target Start/End: Original strand, 34795364 - 34795443
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    ||||||| ||||  |||||||||||   || || |||||| || || ||||||||| |||||||||||||||||||||||    
T  34795364 ctgtttggattgggttatttgagctagcctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 430
Target Start/End: Original strand, 35590857 - 35590976
Alignment:
Q  309 gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaa 407  Q
    |||| |||||| || ||| |||||| ||||||| ||||||| |  |||| |||||||||||||||| ||| || |||  ||||| |||||||||| |||     
T  35590857 gtgaaactgtttggtagagcttatggaaacagcatatggcagt--tcatcagttgttttcagctta-tttccataagctctccatgatagcttatgaaat 35590953  T
Q  408 caacttatagcttacacaaaaac 430  Q
    | |||||||||||| ||||||||    
T  35590954 cgacttatagcttatacaaaaac 35590976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 339
Target Start/End: Original strand, 46504137 - 46504212
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagt-tctgtgagactgttcgggagaacttatgaaaaca 339  Q
    |||| ||||||||||||||||| ||| || |  |||||||| | ||||||||||||||| ||| ||||||||||||    
T  46504137 tgttggaattgacttatttgagtttatctaccggcataagtatttgtgagactgttcggtagagcttatgaaaaca 46504212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 48536653 - 48536723
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    |||||||||||| ||||||||||||||||| ||||||| ||| || |  ||||||| | |||||||||||||    
T  48536653 tgtgagactgtttgggagaacttatgaaaatagcttattgca-tgtttgtaagttgctatcagcttattttt 48536723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 51929497 - 51929599
Alignment:
Q  304 gttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||||||||| |||| ||||||| | |||||||||||||||| || |  ||||||| | |||||| |||| ||| || |||| |||||| |||| ||||    
T  51929497 gttctgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaactta-tttccataagttctccaatatagtttat 51929595  T
Q  404 aaaa 407  Q
    ||||    
T  51929596 aaaa 51929599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 407
Target Start/End: Complemental strand, 5709729 - 5709637
Alignment:
Q  313 gactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaa 407  Q
    ||||||| ||||||| ||||||||| ||||| ||||| |  ||||||| | |||||| |||||||| ||||||| |||||| ||||||| |||||    
T  5709729 gactgtttgggagaatttatgaaaatagcttttggcaattttcataagct-ttttcaacttatttt-cacaagttctccaatatagcttctaaaa 5709637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 447
Target Start/End: Original strand, 7218090 - 7218175
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||||||| |||||||| || |||| ||||| ||||| |||| |||||||||||||||||| |  ||||| |||| |||||||||||    
T  7218090 tgttttcaacttatttt-cataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 27820159 - 27820228
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||  |||||| ||||||||| |||||||  ||||| ||||||| | |||||||||||||||    
T  27820159 tgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttatttt 27820228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 33723300 - 33723413
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| |||||||||||||| |||| || ||| |||||   | |||||||||| | |||| |||||||| |||||||| ||| || || |||| || |    
T  33723300 ctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgaca-tgttcatgagat 33723398  T
Q  363 gttttcagcttattt 377  Q
    |||||||||||||||    
T  33723399 gttttcagcttattt 33723413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 402
Target Start/End: Complemental strand, 37473503 - 37473418
Alignment:
Q  316 tgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctta 402  Q
    |||| |||||||||| |||||||| |||||| ||||  ||||||| | ||| ||||||| |||||| |||| |||||||||| ||||    
T  37473503 tgtttgggagaacttttgaaaacaacttatgacatttttcataagctttttccagctta-ttttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 37617384 - 37617462
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctt 343  Q
    |||||| ||||||||||||||| ||| ||  |  | |||||| |||||||||||| | ||||| |||||||||||||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 449
Target Start/End: Complemental strand, 38578635 - 38578494
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttata-aa 406  Q
    |||||||||||| ||   |||||||||||||| |||||  |||   |||||||||||||| ||||||||||||| ||   || |   |||| ||||  ||    
T  38578635 tgtgagactgtttggactaacttatgaaaacaacttataacatat-tcataagttgttttgagcttatttttcataaactcttctcaatagtttatgtaa 38578537  T
Q  407 acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||||| |||||||  |||||||||||| |||||    
T  38578536 acaacttatagcttatacaaaaataatttaactttatgttatc 38578494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 449
Target Start/End: Complemental strand, 51688802 - 51688672
Alignment:
Q  321 gggagaacttatgaaaacagc---ttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    |||||||||||||||| ||||   ||||| || |  ||| ||||| ||||||||||| ||| || ||||| |||| |||||||||  |||||||||||||    
T  51688802 gggagaacttatgaaagcagcagcttatgacacttttcagaagtttttttcagcttaattt-cataagtc-tccacgatagcttacgaaaacaacttata 51688705  T
Q  417 gcttacacaaaaacgatttaactttattttatc 449  Q
    || |  |||||||| ||||| ||||||||||||    
T  51688704 gcatgtacaaaaacaatttatctttattttatc 51688672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 443
Target Start/End: Complemental strand, 2294972 - 2294884
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    |||||| |||||||| |||||||| |  |||| ||||||||||| |||| |||| | |||||||||||  ||||||| ||||||||||||    
T  2294972 cataagctgttttcaccttatttt-cgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactttat 2294884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 378
Target Start/End: Complemental strand, 6659830 - 6659718
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    ||||| |||||||||||| |||||| || ||||||||||  | ||||||||| || |||| | ||||||| |||| | | ||||| ||  ||||||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagcttatgataacaacatttggca-tgtccataagttgt 6659732  T
Q  365 tttcagcttatttt 378  Q
    |||||||| |||||    
T  6659731 tttcagctcatttt 6659718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 416
Target Start/End: Original strand, 12564509 - 12564569
Alignment:
Q  356 ataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    ||||||||||||||||||| ||| || |||| |||||||||||||||| |||||||| ||||    
T  12564509 ataagttgttttcagctta-tttccataagttctccaagatagcttatgaaaacaacctata 12564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 19390054 - 19389915
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||||||| || ||| |||| || ||| |||||||  | |||| |||||| |||||||| |||||||| | ||||||  || | |||||||||    
T  19390054 ctgtttgtattgactaatgtgaacttatctactaacataagtagttgtgacactgtttgggagaacgtatgaaaaaaacttatgatat-gttcataagtt 19389956  T
Q  363 gttttc-agcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||  |||||||||| ||||||  ||||||||||||||||    
T  19389955 gttttttagcttatttt-cacaagctctccaagatagcttat 19389915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 421
Target Start/End: Original strand, 23902047 - 23902142
Alignment:
Q  325 gaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||| ||||||| |||| |  ||||||||||||||||||||  || || |||  ||| |||||||||| | ||||||||||||||||||    
T  23902047 gaacttatgaaaagagcttatagcat-gtgcataagttgttttcagctta-cttccataagctctctaagatagcttttgaaaacaacttatagctta 23902142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 447
Target Start/End: Complemental strand, 34952268 - 34952184
Alignment:
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||||||||||||||| || |||| |||   |||||||||| ||||||||||| ||||||  | ||||| ||||||||||||||||    
T  34952268 gttttcagcttatttt-cataagttctctttgatagcttatgaaaacaacttacagcttattcgaaaacaatttaactttatttta 34952184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 415
Target Start/End: Complemental strand, 1509843 - 1509752
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttat 415  Q
    ||||||| || ||||||||||||| | | |||||||| | |||||| |||| ||| ||||||| |||||| | ||||||| ||||||||||||    
T  1509843 agaacttttggaaacagcttatggaaattctcataagcttttttcaactta-tttacacaagttctccaacagagcttataaaaacaacttat 1509752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 10233601 - 10233653
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcatt 351  Q
    |||| ||| ||| |||||||| || ||||||||||||||||||||||| ||||    
T  10233601 catatgttttgtaagactgtttggaagaacttatgaaaacagcttatgacatt 10233653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 14332098 - 14332058
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaaca 339  Q
    |||| ||| |||||||||||||||| |||||||||||||||    
T  14332098 catatgttttgtgagactgttcgggtgaacttatgaaaaca 14332058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 449
Target Start/End: Complemental strand, 15477585 - 15477545
Alignment:
Q  409 aacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||| || |||||||| ||||||||||||||||||    
T  15477585 aacttatagcatatacaaaaacaatttaactttattttatc 15477545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 443
Target Start/End: Original strand, 37295763 - 37295815
Alignment:
Q  392 aagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttat 443  Q
    ||||||| |||| |||||||||||||||||| || ||||| ||||||||||||    
T  37295763 aagataggttatgaaaacaacttatagcttaaacgaaaacaatttaactttat 37295815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 39596626 - 39596578
Alignment:
Q  388 ctccaagatagcttataaaa-caacttatagcttacacaaaaacgattt 435  Q
    |||||||||||||||||||| || ||||||||||| |||||||| ||||    
T  39596626 ctccaagatagcttataaaaccatcttatagcttatacaaaaacaattt 39596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 42575389 - 42575469
Alignment:
Q  266 gtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||| |||| |||||||||||||| || ||||||||| || |||||| ||||| | || || |||| |||||| ||||||    
T  42575389 gtttggattgccttatttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatg 42575469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 399
Target Start/End: Original strand, 7928216 - 7928351
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatgg-cattgctcataagtt 362  Q
    ||||||| |||| |||||||||||||| ||  |  |||||||| |||||||||||| |  ||||||| |||||||||||||||| ||||| |||||||||    
T  7928216 ctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagtt 7928315  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagc 399  Q
    |||||||||||| |||||| |||| ||||||||||||    
T  7928316 gttttcagctta-ttttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 18066245 - 18066099
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||| ||||||  | | ||||||||||||||||||||| ||||||||||||| | |||||| |||| |||||  |||| |||||||||||    
T  18066245 cataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcacctta-ttttcttaagttctccaagatag 18066147  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    ||||| |||||| ||||||||||| |  ||||| ||||||||||||||    
T  18066146 cttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 16451234 - 16451133
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagc 399  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||| ||||| |||| || ||||||||||||| ||||||| ||| ||||||||||||    
T  16451234 ataagttctgtgagaccgtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagctta-ttttcacgagttctccaagatagc 16451136  T
Q  400 tta 402  Q
    |||    
T  16451135 tta 16451133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 449
Target Start/End: Original strand, 43279466 - 43279630
Alignment:
Q  285 agcttagcttctagcataagttctgtgagactgttcgg--gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcac 382  Q
    |||||| || |||||||||||| |||||||||||| ||  ||||| |||||||||||||||||| || |  ||||||| | |||||| |||| |||||||    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaactta-ttttcac 43279564  T
Q  383 aagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||| |||||| ||||||||| |||||||||||||||  | |||||||| |||| || ||||||||||    
T  43279565 aagttctccaatatagcttataaaaacaacttatagc--atacaaaaacaatttcacattattttatc 43279630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 1626038 - 1625871
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| |  ||  |||||||| ||| ||||| || | ||||||||||||||  |||||||| || || ||||||| ||||||||||| | ||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctga-tt 1625940  T
Q  378 ttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattt 445  Q
    |||  |||| |||||||||||||||| ||||||||||||| |||| || ||||| ||||||||||||||    
T  1625939 ttcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 264 - 449
Target Start/End: Original strand, 12313091 - 12313276
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| |||  ||||||||| |||| |  ||||||||||  || |||||| |||| ||||||| |||||||||||||||||| || || |||||||||    
T  12313091 ctgtttgtattagcttatttgatcttacccactagcataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgcca-tgttcataagtt 12313189  T
Q  363 gttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    | ||||| |||| |||||| |||  ||||||||||||||||  |||||| || ||||||| |||||||  ||||||||||||||||||    
T  12313190 gatttcacctta-ttttcataagctctccaagatagcttatgtaaacaatttgtagcttaaacaaaaataatttaactttattttatc 12313276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 403
Target Start/End: Complemental strand, 4607077 - 4606939
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| || | |  ||||||| ||||||||| || |||||||||| |||||||| |||||| ||||| |||| || ||    
T  4607077 ctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctg 4606978  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
     ||| |||||| |||||| |||| ||||||||||||||||    
T  4606977 cttttagctta-ttttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 449
Target Start/End: Original strand, 12464404 - 12464576
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||||  || || ||| |||||||| ||||||| |||| |||| | ||||  |||| |||||| | |||   ||| ||| | |||||||||||||    
T  12464404 cttatttgagtgtatctactaacataagttttgtgagaatgtttgggacatcttacaaaaaaagcttacgacatatttcacaagcttttttcagcttatt 12464503  T
Q  377 tttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || ||||||| |||||||||||||||| |||| | |||||||| || |||||||| ||||||||||||||||||    
T  12464504 tt-cacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatc 12464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 277 - 421
Target Start/End: Complemental strand, 750809 - 750666
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    |||||||||| ||| || || ||||| ||| ||||||| |||| |  |||||||||||||| |||| ||| ||||| ||||||| |||||| |||||| |    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagctta-t 750711  T
Q  377 tttcacaagtcctccaagatagcttataaaacaacttatagctta 421  Q
    || || |||| |||||||||||||||| ||||| || ||||||||    
T  750710 ttgcataagttctccaagatagcttatgaaacagctcatagctta 750666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 446
Target Start/End: Complemental strand, 40279285 - 40279167
Alignment:
Q  328 cttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaa 426  Q
    |||||||||||| |||||||||||| ||||||  | |||||||| || |||||| |||| |||||| ||||||||| ||||||||||||| |||| || |    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagc-taattttcataagttctccaacatagcttatgaaaacaacttatatcttatacca 40279187  T
Q  427 aaacgatttaactttatttt 446  Q
    |||| ||||||||| |||||    
T  40279186 aaacaatttaacttcatttt 40279167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 447
Target Start/End: Original strand, 41812011 - 41812191
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| |||| |||||||||||||| || |   || |||||  ||||| ||||| |||||||||| ||||||||||||||| ||||  ||||||| | |    
T  41812011 tgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttt 41812110  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    ||||| |||||||  |  ||||  ||||||||||||| | ||||| ||| |||| || |||||||| ||||||||| ||||||    
T  41812111 tttcaacttattt--cctaagttttccaagatagcttttgaaacatcttgtagcatatacaaaaacaatttaacttcatttta 41812191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 28677577 - 28677690
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctg-tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||||| || ||||||||||  | || |||||||| ||| | |||||||| |||||||||||||||||||||||||| ||||  |||||||||    
T  28677577 ctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacatt-ttcataagtt 28677675  T
Q  363 gttttcagcttattt 377  Q
    |||||| ||||||||    
T  28677676 gttttcggcttattt 28677690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 447
Target Start/End: Complemental strand, 2142806 - 2142622
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||  |||||||||||||| ||| || |  ||||||||| | |||||||||| |||||||||||||||||||  || || || || |||| || ||    
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctg 2142707  T
Q  364 ttttcagcttatttttcacaagtcctcc-aagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||| |||||||||| || || | |||| ||||||  |||| |||||||||||||||||| |||||||  || || ||||||||||    
T  2142706 tttttagcttatttt-cataaattctcccaagataaattatgaaaacaacttatagcttatacaaaaataatctagctttatttta 2142622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 278 - 449
Target Start/End: Original strand, 15757590 - 15757762
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||||  | || ||||||||| |||||||||| | ||||||| |||||||||| ||||||| || |  ||| ||| | ||||||||||| ||    
T  15757590 ttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagctta-tt 15757688  T
Q  378 ttcacaagtcctccaagatagcttataaa-acaacttatagcttacac-aaaaacgatttaactttattttatc 449  Q
    |||| | || |||    |||||||||||| |||||||||||| || || |||||| ||||||||||||||||||    
T  15757689 ttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaactttattttatc 15757762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 321 - 441
Target Start/End: Complemental strand, 26626968 - 26626848
Alignment:
Q  321 gggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagct 419  Q
    ||||||||||| ||||| |||||||| ||||| ||||||  ||||||||| ||| |||||| |||| || ||||||||||||| |||||| ||| |||||    
T  26626968 gggagaacttacgaaaatagcttatgacattgttcataatctgttttcaggtta-ttttcataagttctgcaagatagcttatgaaaacagcttctagct 26626870  T
Q  420 tacacaaaaacgatttaacttt 441  Q
    || || ||||| ||||||||||    
T  26626869 tatacgaaaacaatttaacttt 26626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 403
Target Start/End: Original strand, 41293120 - 41293219
Alignment:
Q  303 agttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctta 402  Q
    |||| ||||||||| || |||||||||||| ||||||||||||| |||| | |||||| ||||||||||||| | |||| |||| ||||| |||||||||    
T  41293120 agttttgtgagactatttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagctta-tattcataagtactccaggatagctta 41293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 449
Target Start/End: Complemental strand, 41851649 - 41851502
Alignment:
Q  302 aagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagctt 401  Q
    ||||| |||||||||| | ||||||| ||||| ||||| |||||| || |  ||||||| | || |||||||| ||| || || | ||||||||||||||    
T  41851649 aagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaattt-cataaattctccaagatagctt 41851551  T
Q  402 at-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
     | ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  41851550 ctgaaaacaacttatagcatatacaaaaacaatttaactttattgtatc 41851502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 351
Target Start/End: Complemental strand, 42419942 - 42419858
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcatt 351  Q
    |||| ||||||||||||||| ||| |||||  |||||||| | |||||||||| ||||||||||| |||||||||||||| ||||    
T  42419942 tttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatt 42419858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 360
Target Start/End: Complemental strand, 449998 - 449903
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataag 360  Q
    |||||| ||| ||||||||||||||| || |||||||||||| | ||||| |||| ||||| |||| ||||||||||||||| ||||  |||||||    
T  449998 tgtttgcattaacttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataag 449903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 449
Target Start/End: Complemental strand, 11514047 - 11513865
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||| ||||  ||||||||| ||| || ||||||||||  || |||||||||||   |||| ||||||||||||||  |||||||  || ||||| |     
T  11514047 tgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaacagc--atggcatgcct-ataagcta 11513951  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||||  || |||| ||||| |||||||||| |||||||||||||||||| |  ||||| |||| |||||||||||||    
T  11513950 ttttcagcttatttc-caaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatc 11513865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 40682348 - 40682427
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||||| ||||||| |||| |||||||||| | |||| |||||||| ||||| |||||||||||||||| ||||||||    
T  40682348 cataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgttttcaacttatttt 40682427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 378
Target Start/End: Complemental strand, 36534912 - 36534806
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    |||| ||||||||||||||  | ||  |||||||| |||||||||||| |||| ||||||||||||||||||||   |||| ||||||  | ||||||||    
T  36534912 attggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagc 36534813  T
Q  372 ttatttt 378  Q
    |||||||    
T  36534812 ttatttt 36534806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 403
Target Start/End: Original strand, 26143604 - 26143696
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    |||||||||| ||||||||||| ||||||| |||||| ||||| ||| | ||| ||||||||||| |||||| |||| ||||||| ||||||||    
T  26143604 tgagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagctta-ttttcataagttctccaagttagcttat 26143696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 30331902 - 30331821
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| |||||||||||| |||||| || ||  |||||||| |||||||||||| ||||||||||||||||| | ||||||    
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatg 30331821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 407
Target Start/End: Original strand, 7035520 - 7035627
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||||||||||||  | |||||||||| |||||||||||| ||  | ||||||| ||||||| ||||| |||||| ||||  ||||||||||    
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgctta-ttttcataagttttccaagatag 7035618  T
Q  399 cttataaaa 407  Q
     ||||||||    
T  7035619 tttataaaa 7035627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 40279355 - 40279268
Alignment:
Q  328 cttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttat 415  Q
    |||||||||||| |||||||||||| ||||||  |||||||||| || |||||| |||| |||||| ||||||||| ||||||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagc-taattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 40279425 - 40279338
Alignment:
Q  328 cttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttat 415  Q
    |||||||||||| |||||||||||| ||||||  |||||||||| || |||||| |||| |||||| ||||||||| ||||||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagc-taattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 449
Target Start/End: Complemental strand, 42458066 - 42457915
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    ||||||||| ||||||| ||||  |||||  ||||||||||| ||||   ||||    ||||||||||||||||||||||| || | || ||| ||||||    
T  42458066 gcataagttttgtgagagtgtttaggagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttatttt-catatgttctctaagata 42457968  T
Q  398 gcttataaa-acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| || ||| || | |||||| |||||||| ||||||||||||||||||    
T  42457967 gcttatgaatacagctaagagcttaaacaaaaacaatttaactttattttatc 42457915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 43199747 - 43199896
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttata--- 404  Q
    |||||||||||| ||||||| ||| ||| ||| ||| || ||| | | ||||||||||||||||||| ||| || ||| |||||||||||||||||        
T  43199747 tgtgagactgtttgggagaagttacgaatacaacttgtgacat-gtttataagttgttttcagcttaattt-cataagccctccaagatagcttatgtaa 43199844  T
Q  405 -------aaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
           ||||||||||||||||| |||||||| ||||||||||||||||||    
T  43199845 agtttgtaaacaacttatagcttatacaaaaacaatttaactttattttatc 43199896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 458
Target Start/End: Complemental strand, 2416457 - 2416271
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 371  Q
    ||||||||||||||| ||| || ||| |||||||| ||||| |||| | || ||||||||| |||||||||| || ||||| ||| ||| |  |||||||    
T  2416457 attgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcacaagctaatttcagc 2416358  T
Q  372 ttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcctatgctac 458  Q
     ||  ||||| |||| |||  | ||| ||||| |||||| ||||||||||| |  ||||| ||||||||| |||||||| | ||||||    
T  2416357 ata-ctttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctac 2416271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 451
Target Start/End: Complemental strand, 8017528 - 8017399
Alignment:
Q  321 gggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagct 419  Q
    ||||||||||||||||||||||||||  | || |||||| |||||||| || || |||||| |||| |||||||||||||||| ||||||  ||| ||||    
T  8017528 gggagaacttatgaaaacagcttatgata-tgttcataatttgttttctgcgta-ttttcataagttctccaagatagcttatgaaaacagtttacagct 8017431  T
Q  420 tacacaaaaacgatttaactttattttatcct 451  Q
    || |  ||||  |||||||||| |||||||||    
T  8017430 tatatgaaaataatttaactttgttttatcct 8017399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 449
Target Start/End: Complemental strand, 36114536 - 36114386
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    ||||||| | || |||||||| |||||||||| | |||||| || |||  |||| ||| ||| |||||| ||||||||||| | |||  |||||||||||    
T  36114536 cataagtacagtcagactgtttgggagaacttgttaaaacaactaatgaaattgttcaaaagctgtttttagcttattttt-ataagatctccaagatag 36114438  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| ||| | | || ||||| | |||||||| ||||||||||||||||||    
T  36114437 cttatgaaacctatttttagctaatacaaaaacaatttaactttattttatc 36114386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 378
Target Start/End: Complemental strand, 13325686 - 13325608
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||| | ||||| ||||||||||||||| ||||||||||||||| |||| | |||||| | ||||||||| |||||    
T  13325686 ataagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcacataagcttttttcagctcatttt 13325608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 15305826 - 15305712
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| ||  |  |||||||| ||||| |||||| || ||||||| ||| |||| ||||||||| |  |||||||||     
T  15305826 ctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataagttt 15305727  T
Q  364 ttttcagcttatttt 378  Q
    |||||| ||||||||    
T  15305726 ttttcaacttatttt 15305712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 27317531 - 27317449
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| ||||||||||||||||||| || |   |||||||| | |||||||||| | ||||||||||||||||| ||||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 29316742 - 29316878
Alignment:
Q  312 agactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaa 410  Q
    |||| ||||||||||||| |  ||||||||||||| ||| | ||||||||| ||||||||||| ||| || |||| ||||||||||||| || ||||||     
T  29316742 agacagttcgggagaactaacaaaaacagcttatgacat-gttcataagttcttttcagctta-tttccataagttctccaagatagctgatgaaaacag 29316839  T
Q  411 cttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| |||    ||||| ||||||| ||||||||||    
T  29316840 cttatagattatgtgaaaacaatttaaccttattttatc 29316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 42659129 - 42659211
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||  ||| ||||||||||||||  | || ||||||||| |||||||||||| ||||||| || |||||||||||||||    
T  42659129 ctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatg 42659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 449
Target Start/End: Complemental strand, 45229647 - 45229479
Alignment:
Q  280 atttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    ||||||||||| || || ||||||||| ||  | || ||| ||||||||||||||||| | |||||| ||||  |||| || | ||||||||||| ||||    
T  45229647 atttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagcttttttcagctta-tttt 45229549  T
Q  380 cacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    || |||| ||| |||||||||||| ||||||| | ||| | || |||||||| ||||||| | ||||||||    
T  45229548 cataagttctcgaagatagcttatgaaaacaa-tgataacatatacaaaaacaatttaacctcattttatc 45229479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 1647327 - 1647275
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  1647327 agaacttatgaaaacagcttatgacat-gctcataagctgttttcagcttattt 1647275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 24101079 - 24100998
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||| ||||||||||| ||||  |  || |||||||| |||||||||||| ||||||||||||| ||||| ||||||    
T  24101079 tgtttgaatcgacttatttgaacttatatattatcataagttttgtgagactgtttgggagaacttatggaaacaccttatg 24100998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 430
Target Start/End: Original strand, 29628663 - 29628827
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacag-cttatggcattgctcataagttgtt 365  Q
    ||||| ||| |||||||||||||| || ||  |||||||| |||||||| ||  || ||||||||| |||| |  |||||   |||| |||||| |||||    
T  29628663 tttgatttgccttatttgagcttatctactgtcataagttttgtgagacagtctggaagaacttataaaaaaaatcttataaaattgttcataaattgtt 29628762  T
Q  366 ttcagcttatttttcacaagtcctccaagatagcttataa-aacaacttatagcttacacaaaaac 430  Q
    ||||||||||||  || || |  ||||||||||||||| | |||||||||||||||| ||||||||    
T  29628763 ttcagcttatttc-cataaattttccaagatagcttatgagaacaacttatagcttatacaaaaac 29628827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 441
Target Start/End: Original strand, 33319737 - 33319907
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| |||| |||||||||||||  || || |||||||||  ||||||||||| |||||||||| |  ||| |||||||| ||||  | ||||| | |||    
T  33319737 tttggattggcttatttgagcttgtctactggcataagtt--gtgagactgtttgggagaacttttataaatagcttatgacatt--taataagcttttt 33319832  T
Q  367 tcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaacttt 441  Q
    |||||||| |||||| |||| ||||||||||| |||| ||||||  ||||||  || ||||||||  |||||||||    
T  33319833 tcagctta-ttttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaacttt 33319907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 35378993 - 35379072
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat 403  Q
    ||||| ||||||||||||||| ||| | ||| ||||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  35378993 ggagagcttatgaaaacagctgatgac-ttgttcataagttgttttcagctta-ttttcataagctctccaagatagcttat 35379072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 436
Target Start/End: Complemental strand, 680589 - 680483
Alignment:
Q  329 ttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaa 427  Q
    |||||||||||||||||| ||| | | ||||  ||||||||||||||||| ||||||| || ||||||||||||| |||| | ||||||||||| || ||    
T  680589 ttatgaaaacagcttatgacat-gtttataaactgttttcagcttatttt-cacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaa 680492  T
Q  428 aacgattta 436  Q
    ||| |||||    
T  680491 aacaattta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 267 - 339
Target Start/End: Original strand, 1633421 - 1633493
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaaca 339  Q
    |||| ||| ||||||||||| ||| || |||||||||||| ||| | |||||| |||||||||||||||||||    
T  1633421 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 18179101 - 18179021
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||||| ||||||||||||||||||| || ||| |||||||| |||||||| | ||  ||||||||| ||||||| ||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgtgagaccgctcaagagaacttacgaaaacaactta 18179021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 449
Target Start/End: Complemental strand, 32592704 - 32592554
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    ||||||||| || ||| || || ||||||||||||||||| |||||| | || |  ||||||| | || ||| |||| |||||| |||| |||||| ||     
T  32592704 gcataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaactta-ttttcataagttctccaatatt 32592606  T
Q  398 gcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||| ||||||||||||||| || || ||||| ||||||| ||||||||||    
T  32592605 gcttataaaaacaacttatagcgtatac-aaaacaatttaacattattttatc 32592554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 379
Target Start/End: Original strand, 5902512 - 5902582
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattttt 379  Q
    |||||||||||| || ||||||||||||||||||||||| || || ||||||  |||||||||||| |||||    
T  5902512 tgtgagactgtttggaagaacttatgaaaacagcttatgaca-tgttcataaactgttttcagcttgttttt 5902582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 9174964 - 9174853
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttt 366  Q
    |||| ||| ||||||||||||||| ||  | ||||||||| |||||||||||| | | |  ||| | |||||| |||||| ||||| ||||||| | |||    
T  9174964 tttggatttacttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataagctattt 9174865  T
Q  367 tcagcttatttt 378  Q
    ||||||||||||    
T  9174864 tcagcttatttt 9174853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 449
Target Start/End: Complemental strand, 41407394 - 41407268
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaac-aacttatagcttac 422  Q
    ||||||||| ||||| ||||||||||||  ||||||| |  ||| || ||||||| ||||||| ||| |||| | |||||||||  |||||||||| ||     
T  41407394 agaacttattaaaacggcttatggcatttttcataagcttgtttaaggttatttt-cacaagttctcaaagaaaacttataaaaataacttatagcatat 41407296  T
Q  423 acaaaaa-cgatttaactttattttatc 449  Q
    ||||||| | ||||||||||||||||||    
T  41407295 acaaaaaacaatttaactttattttatc 41407268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 378
Target Start/End: Original strand, 43529776 - 43529890
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctg-tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||||||||||||||||||||||| ||  | | |||||  ||  ||| |||||| ||||||| |||||||||||||||||| || || ||||||| |    
T  43529776 ctgtttgaattgacttatttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgcca-tgttcataagct 43529874  T
Q  363 gttttcagcttatttt 378  Q
     ||||||| |||||||    
T  43529875 attttcagtttatttt 43529890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 418
Target Start/End: Complemental strand, 20952506 - 20952353
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| |||||||||||||||||||  | || ||| ||||| ||| ||||| ||   |||||||||||||||||| ||||| || |  |||| |  | |    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagc 418  Q
    ||||| |||| |||||| |||| |||||| |||||| || |||||||||||||||    
T  20952406 tttcaactta-ttttcataagttctccaatatagctaataaaaacaacttatagc 20952353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 40158825 - 40158760
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagctta 374  Q
    |||||||||| | ||| |||||||||||||||||||||| || || | |||||||||||||||||||    
T  40158825 tgtgagactgattgggggaacttatgaaaacagcttatgaca-tgtttataagttgttttcagctta 40158760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 345
Target Start/End: Complemental strand, 32837430 - 32837393
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||||||||| |||||||||||||||||||||||||    
T  32837430 tgtgagactgtttgggagaacttatgaaaacagcttat 32837393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 36114581 - 36114626
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||    
T  36114581 aaaacaacttattgcttatacaaaaacaatttaactttattttatc 36114626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 378
Target Start/End: Original strand, 35378509 - 35378564
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||||||||||| ||| | ||| ||||||||| |||||||||||||||    
T  35378509 ggagaacttatgaaaacagctgatgac-ttgttcataagttattttcagcttatttt 35378564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 378
Target Start/End: Complemental strand, 43570507 - 43570452
Alignment:
Q  322 ggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||||||||||||||| ||||| ||||||| | |||| ||||||||||    
T  43570507 ggagaacttatgaaaacagcttatgacattgttcataagct-tttttagcttatttt 43570452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 441
Target Start/End: Original strand, 43911007 - 43911094
Alignment:
Q  354 tcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaacttt 441  Q
    ||||||||||||||||||||| || |||||||   ||||||||||||| | |||||||||||| ||||| ||  |||| ||||||||||    
T  43911007 tcataagttgttttcagctta-ttatcacaagctttccaagatagcttttgaaaacaacttatggcttatacggaaacaatttaacttt 43911094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 375
Target Start/End: Complemental strand, 787439 - 787373
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    ||||| |||||| | |||||||||||||||||||||||| || ||  |||||| ||||||||||||||    
T  787439 tgtgacactgtttgtgagaacttatgaaaacagcttatgaca-tgtccataagctgttttcagcttat 787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 419
Target Start/End: Original strand, 26372747 - 26372809
Alignment:
Q  356 ataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaacttatagct 419  Q
    |||||||||||||| |||||||| |||||   |||||||||| ||||| |||||||||||||||    
T  26372747 ataagttgttttcaacttatttt-cacaacctctccaagataacttatgaaacaacttatagct 26372809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 449
Target Start/End: Original strand, 33931500 - 33931673
Alignment:
Q  276 acttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagctta 374  Q
    ||||||||||||||| ||  |||||||||  || ||||  ||||| ||||||||  | |||| || |||||| ||| | |||||||||  ||||||||||    
T  33931500 acttatttgagcttacctaatagcataagcacttgtgactctgtttgggagaacaaaagaaatcaacttatgacat-gttcataagtttatttcagctta 33931598  T
Q  375 tttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||  ||| | | |||||| ||||||||| |||||| ||||||||||| |||||||| || | || ||||||||||    
T  33931599 tttc-cactatttctccaaaatagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatc 33931673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 458
Target Start/End: Original strand, 44438759 - 44438951
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||||||||||| ||||||||||| || |   |||||   || |||||||||  ||| |||| | ||||||||||||||| || || ||||||  ||    
T  44438759 ctgtttgaattgactgatttgagcttatctacagacataatcact-tgagactgtctgggggaacatgtgaaaacagcttatgaca-tgttcataacctg 44438856  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcctatgctac 458  Q
    ||||||||||| ||| ||||||  ||||| |||| ||||| || ||| ||||| ||||  ||||||||  ||| ||||||||||||| | ||||||    
T  44438857 ttttcagctta-tttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaacagtttgactttattttatcttttgctac 44438951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 1893290 - 1893335
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagctt 401  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  1893290 cataagttattttcagcttatttt-cacaagttctccaagatagctt 1893335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 378
Target Start/End: Original strand, 5365514 - 5365609
Alignment:
Q  281 tttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    |||||| ||| || |||||||||||| |||  || |||| | ||| ||||||  | ||||||| || ||||| |||||||||||||||||||||||||    
T  5365514 tttgagtttatctactagcataagttttgtatgattgtttgagaggacttat--agacagcttttgacattgttcataagttgttttcagcttatttt 5365609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 31561668 - 31561742
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||||||||||| ||| || ||| |||||||| ||| | |||||| |||| ||||| |||||||||| ||||    
T  31561668 attgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatg 31561742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 33941938 - 33941876
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||||| ||||||| ||||| |||| |||||||| |||| ||||| |||||||    
T  33941938 ctccaagatagcttatgaaaacaagttataacttatacaaaaacaattttactttgttttatc 33941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 39073718 - 39073792
Alignment:
Q  376 ttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||| ||| |||||| ||||||||| ||||  ||||||||| || |||||||| ||||||| ||||||||||    
T  39073718 ttttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaacgttattttatc 39073792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 446
Target Start/End: Complemental strand, 42907371 - 42907329
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    |||||||||||||||||| || ||||| |||||||||||||||    
T  42907371 aaaacaacttatagcttaaacgaaaacaatttaactttatttt 42907329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 44439408 - 44439462
Alignment:
Q  395 atagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttat 448  Q
    ||||||||||||| ||| |||||||||| ||||||||  ||||||||||||||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttat 44439462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 449
Target Start/End: Original strand, 7103491 - 7103586
Alignment:
Q  355 cataagttgttttcagcttatttttcacaagtcctccaagatagcttat--aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||| |||||| |||||||||   ||| ||||||||||||  |||||| ||||||||||| |  |||||  ||| |||||||||||||    
T  7103491 cataagttgtttttagctta-ttttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatc 7103586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 10567163 - 10567095
Alignment:
Q  309 gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||| ||||||  || || |||||||||||| ||| | ||||||||||||||||||| |||||    
T  10567163 gtgagactgtttgggagagattgtggaaacagcttatgacat-gatcataagttgttttcagctaatttt 10567095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 14316064 - 14316176
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||||||||  |||||||||||| || ||||||| ||| | ||||||||| ||  ||||| |||||| ||||| |||||| |||   | ||||| ||    
T  14316064 tgtttgaattgaaatatttgagcttaactactagcatgagtgcttgtgagactattttggagagcttatggaaacaacttatgacatatgt-ataagctg 14316162  T
Q  364 ttttcagcttattt 377  Q
    ||||||||||||||    
T  14316163 ttttcagcttattt 14316176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 421
Target Start/End: Original strand, 42621386 - 42621450
Alignment:
Q  357 taagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||||||||||||||||| ||||||||||| |||||  ||| ||||| |||||| |||||||||||    
T  42621386 taagttgttttcagctta-ttttcacaagttctccagaataacttatgaaaacagcttatagctta 42621450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 421
Target Start/End: Complemental strand, 44590089 - 44590029
Alignment:
Q  361 ttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||||||||||||||| | ||||||| || ||||||||||||| ||||||||||||| ||||    
T  44590089 ttgttttcagcttattct-cacaagttcttcaagatagcttatgaaaacaacttataactta 44590029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 44606078 - 44606142
Alignment:
Q  313 gactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||| || |||||||||||||||| |||||| || ||  |||||||||||||||||| |||||    
T  44606078 gactgtttggaagaacttatgaaaacaacttatgaca-tgtccataagttgttttcagctgatttt 44606142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 31744450 - 31744370
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||||| |||| |||||||| ||||| || |   |||||||| | |||||||||| | |||||||| |||||||||||||    
T  31744450 ctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagctta 31744370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 31982442 - 31982370
Alignment:
Q  273 ttgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagctta 344  Q
    ||||||||||| |||||| || ||| ||||||  | ||||| ||| || ||||||||||||||||||||||||    
T  31982442 ttgacttatttaagcttacctactaacataagcacctgtgacactatttgggagaacttatgaaaacagctta 31982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 32106764 - 32106800
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||||| | ||||||||||||||||||||||||    
T  32106764 tgagactgtttgtgagaacttatgaaaacagcttatg 32106800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 378
Target Start/End: Original strand, 43717117 - 43717168
Alignment:
Q  326 aacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||||||    
T  43717117 aacttatgaaaacagcttaggacattt-tcataggttgttttcagcttatttt 43717168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 306 - 449
Target Start/End: Complemental strand, 2735179 - 2735036
Alignment:
Q  306 tctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-a 404  Q
    |||||||||||||| | || ||||||||||||| ||||||| ||||  ||||||| ||||||| ||||| |||||| ||||  | |||||| |||||| |    
T  2735179 tctgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggctta-ttttcataagttgttcaagattgcttatga 2735081  T
Q  405 aaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| ||||||| ||| |||||||  ||||||||||||||||||    
T  2735080 aaacagcttatagattatacaaaaataatttaactttattttatc 2735036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 323 - 449
Target Start/End: Original strand, 9093533 - 9093659
Alignment:
Q  323 gagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    |||| |||||||||| |||||||| ||||| | ||||  ||||||||||||||||| |  |||| ||| |||| ||||||| |||||| |||||||||||    
T  9093533 gagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttatttt-cttaagttctctaagacagcttatgaaaacagcttatagctta 9093631  T
Q  422 cacaaaaacgatttaactttattttatc 449  Q
     || ||||| ||||||||||||||||||    
T  9093632 tacgaaaacaatttaactttattttatc 9093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 848140 - 848027
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||| |||||||||||||| ||  ||||||||||| |||||||||||| || ||||||||| ||||| ||||||| ||||  || |||| |     
T  848140 ctgtttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagctt 848042  T
Q  364 ttttcagcttatttt 378  Q
    |||||||||||||||    
T  848041 ttttcagcttatttt 848027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 299 - 447
Target Start/End: Original strand, 20368134 - 20368281
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatag 398  Q
    |||||||| ||| ||||| || ||||||||||||||||||| |||||| || || ||||||| |  ||||| |||| |||||| |||| |||||||| ||    
T  20368134 cataagttttgtaagactatttgggagaacttatgaaaacaacttatgaca-tgttcataagctagtttcaactta-ttttcataagttctccaagaaag 20368231  T
Q  399 cttat-aaaacaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    ||||| ||||||||||||| || | |||||||| ||| ||||| ||||||    
T  20368232 cttatgaaaacaacttataactcatacaaaaacaattcaacttcatttta 20368281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 298 - 403
Target Start/End: Complemental strand, 31813279 - 31813175
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagata 397  Q
    ||||||||| ||||||||| || |||||||||||||||||  |||||||  |||| |||||||  |||||||||||| |||||| | || ||||||||||    
T  31813279 gcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagctta-ttttcatatgttctccaagata 31813181  T
Q  398 gcttat 403  Q
    ||||||    
T  31813180 gcttat 31813175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 278 - 416
Target Start/End: Complemental strand, 2455397 - 2455259
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    ||||||||||||| || | | ||||||||  |||| ||| || | ||||||||||||||||| |||||  ||||| | ||||||||||||||||||| ||    
T  2455397 ttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagctta-tt 2455299  T
Q  378 ttcacaagtcctccaagatagcttat-aaaacaacttata 416  Q
    ||||||| | ||||||||| || ||| |||||| ||||||    
T  2455298 ttcacaacttctccaagattgcatatgaaaacagcttata 2455259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 451
Target Start/End: Complemental strand, 31624181 - 31624049
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagct--- 419  Q
    ||||||||||||||||||||||| || || ||||||| |||||||| |||| |||||| || | |||||||||||| ||| |||||| |||||||||       
T  31624181 agaacttatgaaaacagcttatgaca-tgttcataagctgttttcaactta-ttttcataatttctccaagatagcctatgaaaacagcttatagcttaa 31624084  T
Q  420 ---tacacaaaaacgatttaactttattttatcct 451  Q
       || ||||||||||||||||||||| |||||||    
T  31624083 gcctatacaaaaacgatttaactttatattatcct 31624049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 378
Target Start/End: Complemental strand, 2455126 - 2455029
Alignment:
Q  278 ttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||| |||| || ||| |||||||| |||||||||||| |||||||||| ||||||   |||||| ||||| ||||||  ||||||||||||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaa---cttatgacattgttcataacctgttttcagcttattt 2455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 837135 - 837319
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgt 364  Q
    |||||| ||||||||||| ||| ||| |  |||||||| ||| |||| |||||||  ||||||||| |||||||| || |   ||| |  |||||    |    
T  837135 tgtttggattgacttattagagtttatccactagcataggttgtgtgggactgtttaggagaacttgtgaaaacaactaaaaacatcgtccataaaaaat 837234  T
Q  365 tttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||||| || |||| ||||||||||||| || ||||| ||||||||||||||| ||||| |||||||| | |||||||    
T  837235 tttcagcttatttt-cataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaactctgttttatc 837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 103582 - 103500
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    ||||||| |||||||||||||||||||  |  ||||||||||| |||| || |||||| |||||||||  |||||||||||||    
T  103582 ctgtttggattgacttatttgagcttatatattagcataagttttgtgtgattgttcgagagaacttacaaaaacagcttatg 103500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 300 - 378
Target Start/End: Original strand, 9912145 - 9912223
Alignment:
Q  300 ataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttt 378  Q
    ||||||| || | |||||||  ||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||||||||    
T  9912145 ataagttttgggcgactgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttatttt 9912223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 421
Target Start/End: Original strand, 10616683 - 10616787
Alignment:
Q  315 ctgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttataaaacaactta 414  Q
    ||||| |||||||||||| |||||| |||||| || || ||||||| ||||||||| |||||||| | || ||||| |||||| |||| |||||| ||||    
T  10616683 ctgtttgggagaacttatcaaaacaccttatgaca-tgttcataagctgttttcagtttattttt-ataaatcctctaagataacttaaaaaacagctta 10616780  T
Q  415 tagctta 421  Q
    |||||||    
T  10616781 tagctta 10616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 445
Target Start/End: Original strand, 34430447 - 34430560
Alignment:
Q  332 tgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagcttacacaaaaac 430  Q
    ||||||||||||||| ||||  ||||||| | ||||||||||| |||||| || | |||||||||||||||| |||||| |||||| | || ||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagctta-ttttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaac 34430545  T
Q  431 gatttaactttattt 445  Q
     |||| | |||||||    
T  34430546 aattttattttattt 34430560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 378
Target Start/End: Original strand, 34882339 - 34882453
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    ||||||| |||||||||||| | |||| || |||| ||||||| |||  |||||||  |||||| ||||||||| |  ||||| ||||| ||||||||||    
T  34882339 ctgtttggattgacttatttcatcttatctactagtataagttttgttggactgtttaggagaatttatgaaaataagttatgacattgttcataagttg 34882438  T
Q  364 ttttcagcttatttt 378  Q
    |||||  ||||||||    
T  34882439 ttttccacttatttt 34882453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 4163304 - 4163223
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| |||| |||||||||||||| || || ||||||||| |  ||||||||||| |||||| |||||||||| ||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatg 4163223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 4224925 - 4224844
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| |||| |||||||||||||| || || ||||||||| |  ||||||||||| |||||| |||||||||| ||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatg 4224844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 447
Target Start/End: Complemental strand, 769245 - 769108
Alignment:
Q  308 tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaa 406  Q
    |||||||||||| ||  ||||||||||||||| |||||| || || ||||||| |||||||| ||||  ||||  ||||||| |||| |||||||| |||    
T  769245 tgtgagactgtttggatgaacttatgaaaacatcttatgaca-tgttcataagctgttttcaactta-ctttcttaagtcct-caagttagcttatgaaa 769149  T
Q  407 acaacttatagcttacacaaaaacgatttaactttatttta 447  Q
    |||  |||||||||| |||||||  | ||||||||||||||    
T  769148 acagtttatagcttatacaaaaaaaaattaactttatttta 769108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 417
Target Start/End: Complemental strand, 13907691 - 13907584
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    |||||| ||| | ||||| ||||||||||||||| || ||||| ||| ||||| ||||||| ||| |||||| || | ||||||||| |||||| |||||    
T  13907691 tgagacggtttgagagaatttatgaaaacagcttctgacattgttcacaagttattttcagttta-ttttcataatttctccaagatggcttatgaaaac 13907593  T
Q  409 aacttatag 417  Q
    |||||||||    
T  13907592 aacttatag 13907584  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 24626324 - 24626260
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatcct 451  Q
    |||||||||||||||| ||||||||||||||  || |||||||| |||||||||| |||||||||    
T  24626324 ctccaagatagcttatgaaaacaacttatagaatatacaaaaacaatttaactttgttttatcct 24626260  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 404
Target Start/End: Complemental strand, 30926671 - 30926533
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 363  Q
    |||||||  ||| ||||||||||||||  |||| |||||| ||   |||||||||| || ||||||||||||||||||||||| || |  ||||  |||     
T  30926671 ctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcatgggtt- 30926573  T
Q  364 ttttcagcttatttttcacaagtcctccaagatagcttata 404  Q
    |||||| ||| |||||||||||||||| || ||||| ||||    
T  30926572 ttttcaactt-tttttcacaagtcctctaatatagcgtata 30926533  T

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Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 6538666 - 6538583
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatgg 347  Q
    ||||||| |||| |||||||||| |||  |  | |||||||||  ||||||||||||||||||| | |||||||||||||||||    
T  6538666 ctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatgg 6538583  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 368
Target Start/End: Original strand, 9559374 - 9559444
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttc 368  Q
    ||||||||| ||||||||||||  |||||| ||||||||||||||||   ||||| ||||||| |||||||    
T  9559374 gcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagctgttttc 9559444  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 8552677 - 8552762
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||||| |||  || |||||||| ||| ||||||||||||||| ||| |||||||| | |||||||  ||||| |||||||||    
T  8552677 cttatttgaacttttctactagcatatgttatgtgagactgttcggtagagcttatgaacatagcttataacattgttcataagtt 8552762  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 449
Target Start/End: Complemental strand, 415358 - 415271
Alignment:
Q  362 tgttttcagcttatttttcacaagtcctccaagatagcttataaaa-caacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||||| | || || |||| |||||  ||||||||||||| |||||||||||||| || ||||| |||||||||| |||||||    
T  415358 tgttttcagctt-tattccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatttaactttgttttatc 415271  T

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Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 449
Target Start/End: Complemental strand, 4006737 - 4006681
Alignment:
Q  394 gatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||||||||| |||||||||||||||||| | |||||| |||| |||||||||||||    
T  4006737 gatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc 4006681  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 351
Target Start/End: Complemental strand, 24982858 - 24982770
Alignment:
Q  263 actgtttgaattgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcatt 351  Q
    |||||||| ||||||| ||| || |||| || ||| |||||||| ||||||||||||  ||||||| | ||| ||||||||||| ||||    
T  24982858 actgtttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatt 24982770  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 421
Target Start/End: Original strand, 34910393 - 34910484
Alignment:
Q  330 tatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaacaacttatagctta 421  Q
    ||||||||||||||||| ||||| |||| |||||||||| |||||  ||||| |||| |||||| | || |||| | ||||||||||||||||    
T  34910393 tatgaaaacagcttatgacattgttcatgagttgttttccgctta-ctttcataagttctccaaaacagattatgagaacaacttatagctta 34910484  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 446
Target Start/End: Original strand, 6909913 - 6909972
Alignment:
Q  388 ctccaagatagcttat-aaaacaacttatagcttacacaaaaacgatttaactttatttt 446  Q
    ||||||||||  |||| ||||||||||||||| || |||||||| |||||||||||||||    
T  6909913 ctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaactttatttt 6909972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 2460069 - 2460182
Alignment:
Q  264 ctgtttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagtt 362  Q
    ||||||| ||| |||||||||||||||    ||||||||||| | |||||||||||| | |||| |||||| ||||| |||||| |||  ||  ||||||    
T  2460069 ctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtct-ttaagtt 2460167  T
Q  363 gttttcagcttattt 377  Q
    ||||||| |||||||    
T  2460168 gttttcaacttattt 2460182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 35070398 - 35070499
Alignment:
Q  277 cttatttgagcttagcttctagcataagttct-gtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttat 375  Q
    |||||||||||||| || ||| ||||||  || ||| ||||||| ||||||||  |||||||||||||| ||||  | ||||||| |||||||| |||||    
T  35070398 cttatttgagcttatctactaacataagcacttgtgggactgtttgggagaacaaatgaaaacagcttaaggca-agatcataagctgttttcaacttat 35070496  T
Q  376 ttt 378  Q
    |||    
T  35070497 ttt 35070499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 345
Target Start/End: Original strand, 20861617 - 20861698
Alignment:
Q  265 tgtttgaattgacttatttgagcttagcttctagcataagt-tctgtgagactgttcgggagaacttatgaaaacagcttat 345  Q
    |||||| |||| |||||||||||||| || || |||||||| | || |||||| || |||||| |||||||||||| |||||    
T  20861617 tgtttggattgtcttatttgagcttacctactggcataagtatatgcgagactttttgggagagcttatgaaaacatcttat 20861698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 29296351 - 29296396
Alignment:
Q  404 aaaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||||||| |||| |||||||  ||||||||||||||||||    
T  29296351 aaaacaacttataccttatacaaaaataatttaactttattttatc 29296396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 346
Target Start/End: Complemental strand, 30536618 - 30536573
Alignment:
Q  301 taagttctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||| |||||||||||| ||||| ||||||||||| ||||||||    
T  30536618 taagttttgtgagactgtttgggaggacttatgaaaatagcttatg 30536573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Complemental strand, 696693 - 696642
Alignment:
Q  324 agaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||||| ||||||||||||| ||| | ||||||| |||||||||||||||    
T  696693 agaacttatcaaaacagcttatgacat-gttcataagctgttttcagcttatt 696642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 835178 - 835226
Alignment:
Q  263 actgtttgaattgacttatttgagcttagcttctagcataagttctgtg 311  Q
    |||||||| |||| |||||||||||||| || |||||||||||| ||||    
T  835178 actgtttggattgccttatttgagcttatctactagcataagttttgtg 835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 377
Target Start/End: Original strand, 2027390 - 2027437
Alignment:
Q  329 ttatgaaaacagcttatggcattgctcataagttgttttcagcttattt 377  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||    
T  2027390 ttatgaaaacagcttatgacatttc-cataagctgttttcagcttattt 2027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 6742959 - 6742887
Alignment:
Q  268 ttgaattgacttatttgagcttagcttctagcataagttc-tgtgagactgttcgggagaacttatgaaaaca 339  Q
    ||||||||||||||||||||||| || |||||||||   | ||||||||| ||| ||||| |||| |||||||    
T  6742959 ttgaattgacttatttgagcttacctactagcataatcacttgtgagactattccggagagcttaagaaaaca 6742887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 449
Target Start/End: Original strand, 9559503 - 9559644
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgct---cataagttgttttcagcttatttttcacaagtcctccaagatagcttataaa 406  Q
    ||||||| || ||||||||||||||||||| |||||| ||||| |   | |||| |||||||| |||| |||||| ||||  | |||||||||||  |||    
T  9559503 tgagactatttgggagaacttatgaaaacaacttatgacattgttctgcgtaagctgttttcaactta-ttttcataagttattcaagatagctttgaaa 9559601  T
Q  407 acaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    |||  || ||| ||  || ||||| |||||| |||||||||||    
T  9559602 acagtttgtagtttctacgaaaacaatttaaatttattttatc 9559644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 10645338 - 10645378
Alignment:
Q  299 cataagttctgtgagactgttcgggagaacttatgaaaaca 339  Q
    |||||||| ||| |||||||| |||||||||||||||||||    
T  10645338 cataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 267 - 346
Target Start/End: Original strand, 26559160 - 26559240
Alignment:
Q  267 tttgaattgacttatttgagcttagcttctagcataagt-tctgtgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||| ||| ||||||||||| ||| || || |||||||  | |||||||||||| || |||||||||||||||| ||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatg 26559240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 449
Target Start/End: Original strand, 28621169 - 28621213
Alignment:
Q  405 aaacaacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||| ||| ||||||| |||||||| ||||||||||||||||||    
T  28621169 aaacatcttgtagcttatacaaaaacaatttaactttattttatc 28621213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 346
Target Start/End: Original strand, 29754063 - 29754099
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatg 346  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  29754063 tgagactgtttgggagaacttacgaaaacagcttatg 29754099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 27681 - 27543
Alignment:
Q  310 tgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatttttcacaagtcctccaagatagcttat-aaaac 408  Q
    |||||||||| |||||| |||||| ||| |||||||| ||| ||| ||||||||||||||||||| ||| |||| |    ||||||||| |||| |||||    
T  27681 tgagactgtttgggagagcttatggaaatagcttatgacatggct-ataagttgttttcagctta-tttccacacgcttaccaagatagtttatgaaaac 27584  T
Q  409 aacttatagcttacacaaaaacgatttaactttattttatc 449  Q
    ||||||||| ||| |  ||||| |||| |||||||||||||    
T  27583 aacttatagtttatatgaaaacaatttgactttattttatc 27543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 351
Target Start/End: Complemental strand, 24739 - 24686
Alignment:
Q  298 gcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcatt 351  Q
    ||||| ||| |||||||||||| |||||||||||| ||||||||||||| ||||    
T  24739 gcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacatt 24686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 334
Target Start/End: Complemental strand, 44177 - 44115
Alignment:
Q  272 attgacttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatga 334  Q
    |||| ||||||||||| || || || ||||| ||| |||||||||||| ||||||||||||||    
T  44177 attggcttatttgagcgtacctactggcatatgttttgtgagactgtttgggagaacttatga 44115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 403
Target Start/End: Complemental strand, 22370 - 22245
Alignment:
Q  277 cttatttgagcttagcttctagcataagttctgtgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagcttatt 376  Q
    ||||||| |||||| ||  | ||||||||| |||||| |||||| ||| |||||||  |||||||||||| || |  || |||| | ||||||||||| |    
T  22370 cttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaagcttttttcagctta-t 22272  T
Q  377 tttcacaagtcctccaagatagcttat 403  Q
    ||||| ||||  ||||| |||||||||    
T  22271 tttcataagttttccaacatagcttat 22245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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