View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15340_low_8 (Length: 248)
Name: NF15340_low_8
Description: NF15340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15340_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 7554333 - 7554091
Alignment:
| Q |
1 |
attgagaaggatagaagctccgcctgcatgggattggagttacgaaaagaaggaactctactcgcgccatggatgtgttgttcactagtattctgaaatg |
100 |
Q |
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| T |
7554333 |
attgagaaggatagaagctccgcctgcatgggattggagttacgaaaagaaggaactctactcgcgccatggatgtgttgttcactagtattctgaaatg |
7554234 |
T |
|
| Q |
101 |
ctctgccgaagttcaaactctaaaatgtcaaatgtttcnnnnnnnacagatttacttctgttagaatttacttttttaatgtcagttatgataagaatgt |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7554233 |
ctctgccgaagttcaaactctaaaatgtcaaatttttctttttttacagatttacttctgttagaatttacttttttaatgtcagttatgataagaatgt |
7554134 |
T |
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| Q |
201 |
tataactttgtattctctgtagtgtttcttttatattattgga |
243 |
Q |
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|||||||||||||||||||||||||||||||||| || ||||| |
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| T |
7554133 |
tataactttgtattctctgtagtgtttcttttatgttgttgga |
7554091 |
T |
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