View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15341_low_14 (Length: 305)

Name: NF15341_low_14
Description: NF15341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15341_low_14
NF15341_low_14
[»] chr2 (35 HSPs)
chr2 (142-246)||(39083006-39083111)
chr2 (1-82)||(10249389-10249470)
chr2 (1-82)||(28863467-28863548)
chr2 (1-82)||(32505655-32505736)
chr2 (1-82)||(9058492-9058573)
chr2 (1-82)||(28381662-28381743)
chr2 (1-82)||(33436107-33436188)
chr2 (5-82)||(40701490-40701567)
chr2 (1-76)||(26891511-26891586)
chr2 (1-82)||(7465742-7465823)
chr2 (1-82)||(13438355-13438436)
chr2 (1-82)||(17473032-17473113)
chr2 (1-74)||(40613909-40613982)
chr2 (1-81)||(3439992-3440072)
chr2 (1-82)||(5574495-5574576)
chr2 (5-82)||(19930831-19930908)
chr2 (1-82)||(30915475-30915556)
chr2 (4-76)||(2997497-2997569)
chr2 (1-51)||(3737986-3738036)
chr2 (5-71)||(17820015-17820081)
chr2 (1-82)||(4060697-4060778)
chr2 (1-82)||(27864716-27864797)
chr2 (4-76)||(43490139-43490211)
chr2 (1-72)||(42257215-42257286)
chr2 (1-74)||(20700835-20700908)
chr2 (4-76)||(38732372-38732444)
chr2 (11-82)||(38882831-38882901)
chr2 (4-74)||(45097745-45097815)
chr2 (4-76)||(13365371-13365443)
chr2 (1-73)||(38273149-38273221)
chr2 (29-74)||(33436231-33436276)
chr2 (4-44)||(3034993-3035033)
chr2 (11-74)||(41575157-41575220)
chr2 (1-74)||(2533144-2533216)
chr2 (2-47)||(36168883-36168928)
[»] chr8 (29 HSPs)
chr8 (1-82)||(504128-504209)
chr8 (1-82)||(14547934-14548015)
chr8 (1-82)||(12831059-12831140)
chr8 (1-82)||(15197345-15197426)
chr8 (1-82)||(23122604-23122685)
chr8 (1-82)||(40423950-40424031)
chr8 (1-72)||(37038501-37038572)
chr8 (1-75)||(8841439-8841513)
chr8 (1-82)||(15258936-15259017)
chr8 (1-82)||(34012303-34012384)
chr8 (5-73)||(5957851-5957919)
chr8 (4-76)||(16383395-16383467)
chr8 (1-82)||(1179947-1180028)
chr8 (1-82)||(10284638-10284719)
chr8 (4-76)||(34307234-34307306)
chr8 (2-82)||(44507095-44507175)
chr8 (1-50)||(9122229-9122278)
chr8 (1-74)||(15048189-15048261)
chr8 (1-74)||(43414588-43414661)
chr8 (4-76)||(24307803-24307875)
chr8 (1-74)||(4854870-4854943)
chr8 (1-74)||(10621094-10621167)
chr8 (24-76)||(30479504-30479556)
chr8 (15-51)||(38229471-38229507)
chr8 (4-51)||(16056411-16056458)
chr8 (11-76)||(14055609-14055674)
chr8 (5-74)||(17443845-17443914)
chr8 (24-76)||(24307647-24307699)
chr8 (24-76)||(32032743-32032794)
[»] chr3 (33 HSPs)
chr3 (1-82)||(26754707-26754788)
chr3 (1-82)||(53982023-53982104)
chr3 (1-82)||(33644212-33644293)
chr3 (1-82)||(52629312-52629393)
chr3 (5-82)||(54868906-54868983)
chr3 (1-82)||(17470417-17470498)
chr3 (1-82)||(49607426-49607507)
chr3 (1-76)||(8076411-8076486)
chr3 (4-82)||(48587101-48587179)
chr3 (1-74)||(26141539-26141612)
chr3 (1-82)||(27714898-27714979)
chr3 (1-82)||(31456701-31456782)
chr3 (1-82)||(11907383-11907464)
chr3 (18-82)||(11095377-11095441)
chr3 (1-74)||(14623846-14623919)
chr3 (9-82)||(36707439-36707512)
chr3 (1-74)||(41189771-41189844)
chr3 (1-82)||(48375713-48375794)
chr3 (4-72)||(36331339-36331407)
chr3 (4-76)||(45058563-45058634)
chr3 (15-82)||(33118872-33118939)
chr3 (12-74)||(24699972-24700034)
chr3 (1-74)||(13898062-13898135)
chr3 (1-74)||(20764922-20764995)
chr3 (1-82)||(30801740-30801821)
chr3 (1-74)||(11347929-11348002)
chr3 (13-74)||(35536646-35536707)
chr3 (1-74)||(47531885-47531958)
chr3 (1-50)||(51419367-51419416)
chr3 (5-68)||(47190960-47191022)
chr3 (5-51)||(1758467-1758513)
chr3 (12-65)||(41080737-41080790)
chr3 (8-68)||(42823137-42823197)
[»] chr6 (17 HSPs)
chr6 (1-82)||(17598566-17598647)
chr6 (1-82)||(32869690-32869771)
chr6 (1-82)||(22880665-22880746)
chr6 (1-73)||(11427639-11427711)
chr6 (4-76)||(15508034-15508106)
chr6 (4-76)||(15990052-15990124)
chr6 (4-76)||(30341370-30341442)
chr6 (8-82)||(31109414-31109488)
chr6 (1-82)||(6209472-6209553)
chr6 (1-74)||(31976268-31976341)
chr6 (1-82)||(29857839-29857920)
chr6 (13-83)||(31953049-31953119)
chr6 (4-72)||(4231570-4231638)
chr6 (1-51)||(23128134-23128184)
chr6 (1-74)||(28536495-28536566)
chr6 (1-50)||(30870058-30870107)
chr6 (5-82)||(15832589-15832666)
[»] chr5 (25 HSPs)
chr5 (1-82)||(18520891-18520972)
chr5 (1-82)||(13811664-13811745)
chr5 (5-72)||(6679720-6679787)
chr5 (1-74)||(2740294-2740367)
chr5 (5-74)||(28177795-28177864)
chr5 (5-82)||(35785211-35785288)
chr5 (1-82)||(36732949-36733030)
chr5 (1-82)||(40145419-40145500)
chr5 (1-71)||(42414309-42414379)
chr5 (1-82)||(14831826-14831907)
chr5 (1-82)||(33149645-33149726)
chr5 (4-76)||(3921275-3921347)
chr5 (4-74)||(2252178-2252248)
chr5 (1-82)||(35943899-35943980)
chr5 (5-50)||(21370048-21370093)
chr5 (1-74)||(15409617-15409690)
chr5 (1-74)||(26720536-26720609)
chr5 (1-74)||(26990285-26990358)
chr5 (1-50)||(31009032-31009081)
chr5 (2-46)||(31132392-31132436)
chr5 (35-82)||(36875644-36875691)
chr5 (8-76)||(39688911-39688979)
chr5 (1-83)||(16327912-16327994)
chr5 (3-40)||(41470425-41470462)
chr5 (11-71)||(39557534-39557594)
[»] chr4 (36 HSPs)
chr4 (1-82)||(6034056-6034137)
chr4 (1-82)||(41236359-41236440)
chr4 (1-82)||(11511469-11511550)
chr4 (1-82)||(42044374-42044455)
chr4 (1-82)||(48183056-48183137)
chr4 (1-74)||(50052435-50052508)
chr4 (1-82)||(480454-480535)
chr4 (1-82)||(54473540-54473621)
chr4 (1-72)||(50526178-50526249)
chr4 (1-82)||(29239898-29239979)
chr4 (4-76)||(17983753-17983825)
chr4 (1-76)||(24995114-24995189)
chr4 (1-82)||(3481666-3481747)
chr4 (1-82)||(29234252-29234333)
chr4 (4-76)||(19670726-19670798)
chr4 (24-74)||(55475211-55475261)
chr4 (1-82)||(23608247-23608328)
chr4 (4-73)||(50813902-50813971)
chr4 (11-76)||(55079731-55079796)
chr4 (4-76)||(47986226-47986298)
chr4 (1-74)||(31910212-31910285)
chr4 (4-73)||(32766979-32767048)
chr4 (1-50)||(41823926-41823975)
chr4 (1-74)||(48647733-48647806)
chr4 (21-72)||(44536773-44536823)
chr4 (8-74)||(8343177-8343243)
chr4 (24-78)||(18924525-18924579)
chr4 (24-74)||(29547989-29548039)
chr4 (1-71)||(29977908-29977978)
chr4 (5-74)||(28480279-28480348)
chr4 (5-74)||(28481154-28481223)
chr4 (5-74)||(28482029-28482098)
chr4 (29-74)||(40574799-40574844)
chr4 (21-50)||(18769074-18769103)
chr4 (4-65)||(29589750-29589811)
chr4 (2-50)||(53352574-53352622)
[»] chr1 (30 HSPs)
chr1 (1-82)||(2581927-2582008)
chr1 (5-82)||(9474887-9474964)
chr1 (1-74)||(27564742-27564815)
chr1 (1-82)||(38632328-38632409)
chr1 (1-82)||(48716289-48716370)
chr1 (1-76)||(3000337-3000412)
chr1 (1-74)||(32813267-32813340)
chr1 (1-82)||(50630470-50630551)
chr1 (4-76)||(5959010-5959082)
chr1 (1-72)||(8346395-8346466)
chr1 (1-72)||(38595176-38595247)
chr1 (1-72)||(44548383-44548454)
chr1 (1-72)||(51898690-51898761)
chr1 (1-83)||(6260881-6260963)
chr1 (1-82)||(47452327-47452408)
chr1 (4-76)||(50591010-50591082)
chr1 (1-67)||(48489328-48489393)
chr1 (1-74)||(11152385-11152458)
chr1 (5-74)||(45044571-45044640)
chr1 (1-72)||(37649220-37649291)
chr1 (1-82)||(44453991-44454072)
chr1 (1-73)||(43153-43225)
chr1 (1-64)||(13414791-13414854)
chr1 (4-74)||(41608503-41608573)
chr1 (5-67)||(41758832-41758894)
chr1 (4-78)||(47748459-47748532)
chr1 (1-83)||(26440745-26440827)
chr1 (4-82)||(37926448-37926526)
chr1 (4-82)||(26274444-26274522)
chr1 (29-83)||(49811562-49811616)
[»] chr7 (35 HSPs)
chr7 (1-82)||(3784007-3784088)
chr7 (1-82)||(7389401-7389482)
chr7 (1-74)||(19329862-19329935)
chr7 (1-82)||(38837229-38837310)
chr7 (5-82)||(4999525-4999602)
chr7 (1-82)||(8080390-8080471)
chr7 (5-82)||(35137545-35137622)
chr7 (1-82)||(36361920-36362001)
chr7 (1-82)||(38267052-38267133)
chr7 (1-74)||(3434582-3434655)
chr7 (1-74)||(19436194-19436267)
chr7 (1-82)||(36362038-36362119)
chr7 (1-76)||(3694385-3694460)
chr7 (4-71)||(8238236-8238303)
chr7 (1-82)||(36208185-36208266)
chr7 (1-74)||(46374809-46374882)
chr7 (4-76)||(22343379-22343451)
chr7 (4-76)||(41915759-41915831)
chr7 (12-71)||(2318261-2318320)
chr7 (1-82)||(40957719-40957800)
chr7 (4-76)||(7727924-7727996)
chr7 (5-73)||(32564437-32564505)
chr7 (4-76)||(38044215-38044287)
chr7 (2-82)||(46033809-46033889)
chr7 (1-74)||(18207200-18207272)
chr7 (1-74)||(35522896-35522969)
chr7 (2-72)||(41423704-41423774)
chr7 (29-82)||(10343598-10343651)
chr7 (1-74)||(21234421-21234494)
chr7 (1-46)||(32951500-32951545)
chr7 (5-74)||(40846124-40846193)
chr7 (1-48)||(27744316-27744363)
chr7 (1-82)||(12310918-12310997)
chr7 (1-51)||(16374831-16374881)
chr7 (4-74)||(39255934-39256003)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-76)||(152516-152587)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-51)||(17097-17147)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-82)||(4041-4122)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-82)||(10116-10197)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-72)||(936-1007)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-72)||(936-1007)


Alignment Details
Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 39083006 - 39083111
Alignment:
Q  142 caacaactttctccacaccgtagtgctgttgtgagagctacccagactagcacaaatcccgaggcaataaagaaaggtt-aaaataattgatttgtatga 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||    
T  39083006 caacaactttctccacaccgtagtgctgttgtgagagctacccagactagcacaaatcctgaggcaataaagaaaggttaaaaaaaatttatttgtatga 39083105  T
Q  241 tttgac 246  Q
     |||||    
T  39083106 cttgac 39083111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10249389 - 10249470
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  10249389 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctat 10249470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 28863548 - 28863467
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  28863548 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 28863467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32505655 - 32505736
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  32505655 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctat 32505736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9058573 - 9058492
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  9058573 gtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 9058492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 28381662 - 28381743
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  28381662 gtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctat 28381743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33436107 - 33436188
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  33436107 gtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 33436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 40701567 - 40701490
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  40701567 ttgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctat 40701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26891511 - 26891586
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  26891511 gtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggt 26891586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7465742 - 7465823
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||| || |||||||||||| |||||||| |||||    
T  7465742 gtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctat 7465823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13438436 - 13438355
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || | ||||||| ||||||||||| |||||    
T  13438436 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctat 13438355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17473113 - 17473032
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| || |||||||||||| |||||||| |||||    
T  17473113 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctat 17473032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40613909 - 40613982
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  40613909 gtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 40613982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3440072 - 3439992
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatcta 81  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||||||||   |||||||||||||||||||| ||||    
T  3440072 gtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtcta 3439992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5574495 - 5574576
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || |||||||||||| |||||||||| || |||||||||||||||||| || |||||    
T  5574495 gtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctat 5574576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 19930831 - 19930908
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||| |||| || |||||||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  19930831 ttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctat 19930908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30915556 - 30915475
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| ||||||||||||||| || |||||||||||| |||||| ||| || ||||||||||||||||||||| |||||    
T  30915556 gtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctat 30915475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 2997497 - 2997569
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  2997497 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3738036 - 3737986
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3738036 gtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17820015 - 17820081
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  17820015 ttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 17820081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4060778 - 4060697
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| |||||| ||||||| || || |||||||||||||||||| |||| |||||||||||| ||||||||||| |||||    
T  4060778 gtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctat 4060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27864797 - 27864716
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| ||||||||||||||||  || |||||||||||||||||| |||| || ||||||||||||| ||||||| |||||    
T  27864797 gtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctat 27864716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 43490211 - 43490139
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  ||||||||| |||||||||||    
T  43490211 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggt 43490139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42257286 - 42257215
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||||||| ||| |||| |||||||||||| |||||||||| || | |||||||||||||||    
T  42257286 gtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaa 42257215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20700908 - 20700835
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||| ||||||||||||||||| || |||||||||||||||| || ||| || ||||||||||||| |||||    
T  20700908 gtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagg 20700835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 38732444 - 38732372
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| |  | ||||||| ||| |||||||    
T  38732444 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggt 38732372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 38882831 - 38882901
Alignment:
Q  11 ggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||| || |||||||||||||||||| ||| ||||||  ||||||||||||||||| |||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgt-caaagggttattgccacctaagggtgtctat 38882901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 45097745 - 45097815
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||  || ||||||||||||||||||| |||||||| |  | |||||||||||||||||    
T  45097745 cttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaagg 45097815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 13365443 - 13365371
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  ||  ||||||||||||||||||||||||||| |  ||| |||||||| ||||||||    
T  13365443 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggt 13365371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38273149 - 38273221
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    ||||| |||||||||||| ||| | || ||||||||||||||||||||||  || |||||||||||| |||||    
T  38273149 gtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaag 38273221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 33436276 - 33436231
Alignment:
Q  29 tgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  33436276 tgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaagg 33436231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 3034993 - 3035033
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgt 44  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  3034993 cttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 41575220 - 41575157
Alignment:
Q  11 ggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| ||||||||||||| |||||||||||  |||| || |||||||| ||| ||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaagg 41575157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2533216 - 2533144
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||| | ||| | || |||||||||||||||| |||||| || | ||||||||||| |||||    
T  2533216 gtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaagg 2533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36168928 - 36168883
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtggg 47  Q
    ||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  36168928 tgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtggg 36168883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 504128 - 504209
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  504128 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctat 504209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14548015 - 14547934
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  14548015 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctat 14547934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12831140 - 12831059
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||| ||||||||||| |||||    
T  12831140 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctat 12831059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 15197426 - 15197345
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||| || |||||    
T  15197426 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctat 15197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23122604 - 23122685
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  23122604 gtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctat 23122685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40423950 - 40424031
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||| |||| || |||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  40423950 gtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctat 40424031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37038572 - 37038501
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| || |||||||||||||||||    
T  37038572 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 37038501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8841439 - 8841513
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaaggg 75  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||| || |||||| |||||||||||||    
T  8841439 gtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15258936 - 15259017
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  | |||||||||| ||||| ||||||||    
T  15258936 gtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctat 15259017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34012303 - 34012384
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || ||||| ||||||||||||||||| || |||||||| |||||||||||| |||||    
T  34012303 gtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctat 34012384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5957919 - 5957851
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||    
T  5957919 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaag 5957851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 16383467 - 16383395
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  16383467 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 16383395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1179947 - 1180028
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||  ||||| |||| || ||||||||||||||||||||||| || |||||||| |||||||||||| |||||    
T  1179947 gtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctat 1180028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10284638 - 10284719
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||  |||||||| ||| ||||||| |||||    
T  10284638 gtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctat 10284719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 34307306 - 34307234
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||| ||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  34307306 cttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 34307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 44507095 - 44507175
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||||||  ||  ||||||| |||||||||||| |||||    
T  44507095 tgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctat 44507175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9122278 - 9122229
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  9122278 gtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15048189 - 15048261
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| | || |||||||||||||||| |||||| || |||||||||||||||||||    
T  15048189 gtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaagg 15048261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43414588 - 43414661
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| |||| |||||||| ||| ||||||||||||||||||| || ||||| |||||| ||||||    
T  43414588 gtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagg 43414661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 24307803 - 24307875
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||| ||||||||||||||||||||| |  | |||||||||||||||||||    
T  24307803 cttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggt 24307875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4854870 - 4854943
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||| ||||||| ||| |||||| |||||||||| ||| |||||  || |||||||||||||||||||    
T  4854870 gtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagg 4854943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10621094 - 10621167
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| || | ||| | || ||||||||||||||||||||||| || |||||||| ||||||||||    
T  10621094 gtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 10621167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 30479504 - 30479556
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    ||||||||||||||||| ||||| |||| || |||||||||||||||||||||    
T  30479504 ccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggt 30479556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 38229507 - 38229471
Alignment:
Q  15 tccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    |||||||||||||||||||||||||||||||||||||    
T  38229507 tccacgtgaccacatgtcagatttttgtgtgggtgtc 38229471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 16056411 - 16056458
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||    
T  16056411 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtc 16056458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 14055609 - 14055674
Alignment:
Q  11 ggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||| |||||| |||||||||||||| |||| |   |||||||| |||||||||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggt 14055674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 17443914 - 17443845
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||  | | |||||||| |||||||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 17443845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 24307699 - 24307647
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||| ||||||||||||||||||||| |  | |||||||||||||||||||    
T  24307699 ccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggt 24307647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 32032794 - 32032743
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    ||||||||||||||||||||||| ||| ||| | |||||||||||||||||||    
T  32032794 ccacatgtcagatttttgtgtggatgt-caaggatgtattgccacctaagggt 32032743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26754788 - 26754707
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  26754788 gtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctat 26754707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 53982104 - 53982023
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  53982104 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 53982023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 33644293 - 33644212
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||| |||||| |||||    
T  33644293 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctat 33644212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 52629393 - 52629312
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  52629393 gtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 52629312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 54868906 - 54868983
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  54868906 ttgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctat 54868983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17470498 - 17470417
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||||| ||| |||||    
T  17470498 gtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctat 17470417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 49607507 - 49607426
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||| |||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  49607507 gtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 49607426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8076486 - 8076411
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||| || |||||| ||||||||||||||    
T  8076486 gtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggt 8076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 48587101 - 48587179
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||| |||||||||| || |||||||||||| ||| |||||| || |||||||||||||||||||||||||||    
T  48587101 cttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctat 48587179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26141539 - 26141612
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||||  || |||||||||||||||||||    
T  26141539 gtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagg 26141612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27714898 - 27714979
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||| || |||||||| |||||||| ||| |||||    
T  27714898 gtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctat 27714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 31456782 - 31456701
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||||| |||| |||| |||||    
T  31456782 gtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctat 31456701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 11907464 - 11907383
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||| ||   |||||||| ||||||||||| |||||    
T  11907464 gtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctat 11907383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 11095377 - 11095441
Alignment:
Q  18 acgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 11095441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14623846 - 14623919
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| | ||||||| ||| |||||||||||||||| |||||||||| |  |||||||||||||||||||    
T  14623846 gtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 14623919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 36707439 - 36707512
Alignment:
Q  9 gcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||| ||||||| || || |||||||||||||||||| |||| || ||||||||| |||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctat 36707512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41189771 - 41189844
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| |||| ||||| |||||| |||||||||| || | |||||||||||||||||    
T  41189771 gtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaagg 41189844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48375713 - 48375794
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||| | | ||  ||||||||| ||||||||||| |||||    
T  48375713 gtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctat 48375794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 36331339 - 36331407
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  36331339 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 45058563 - 45058634
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  ||  |||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  45058563 cttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgt-caagggtgtattgccacctaagggt 45058634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 33118872 - 33118939
Alignment:
Q  15 tccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||| || ||||| ||||||||||||||||| || ||||||||| ||||||||||| |||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctat 33118939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 24699972 - 24700034
Alignment:
Q  12 gggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||| |||| || ||||||||| |||||||||| ||||||||||||||| ||||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagg 24700034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13898062 - 13898135
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| | ||||||| ||| ||| |||||||||||| |||||||||| |  |||||||||||||||||||    
T  13898062 gtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20764922 - 20764995
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||| ||||||||| ||| |||| ||||||||||||||||||||||  ||  ||||||| ||||||||||    
T  20764922 gtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 20764995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30801740 - 30801821
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||||||||  |||| |||||||| |||||||||||||| || || ||||||||  ||||||||||| |||||    
T  30801740 gtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctat 30801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11347929 - 11348002
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||| ||| ||||||| ||| |||| |||||||||||||||||| |||| || | ||||||| |||||||||    
T  11347929 gtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagg 11348002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 35536707 - 35536646
Alignment:
Q  13 ggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||| ||||||| ||||| |||||| |||||||||| || ||||||||||||| |||||    
T  35536707 ggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataagg 35536646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 47531958 - 47531885
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||||| ||  || |||| ||||||||| |||||||| |||  ||||||||||||||| ||||||    
T  47531958 gtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaagg 47531885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51419367 - 51419416
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    |||||||||||||||| | ||| |||| ||||||||||||||||||||||    
T  51419367 gtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgt 51419416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 47191022 - 47190960
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccac 68  Q
    ||||| |||||||| || ||||||||||||| ||||||||||||||  || |||||||||||||    
T  47191022 ttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgt-aaagggtgtattgccac 47190960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 1758467 - 1758513
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    ||||| || |||||||| |||| ||||||||||||||||||||||||    
T  1758467 ttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtc 1758513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 41080790 - 41080737
Alignment:
Q  12 gggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgc 65  Q
    |||||||| ||||||||| ||||||||||| ||||||||| || ||||| ||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgc 41080737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42823197 - 42823137
Alignment:
Q  8 tgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccac 68  Q
    |||||||||||  ||||||||||||| |||||| |||||||||| |  |||||||| ||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccac 42823137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17598647 - 17598566
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  17598647 gtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctat 17598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32869771 - 32869690
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  32869771 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 32869690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 22880665 - 22880746
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||||| || ||||||||||||||||||||| |||||    
T  22880665 gtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 22880746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11427711 - 11427639
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| || | ||||||||||||||||    
T  11427711 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaag 11427639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 15508034 - 15508106
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  15508034 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 15508106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 15990052 - 15990124
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  15990052 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 15990124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 30341370 - 30341442
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  30341370 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 30341442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 31109414 - 31109488
Alignment:
Q  8 tgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||||||| || |||||||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  31109414 tgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 6209472 - 6209553
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||| |||||||||||||||||| || || |||||||||||||| ||||| ||  |||||||||||||||||||| |||||    
T  6209472 gtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctat 6209553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31976341 - 31976268
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||  || ||| |||||||||||||||    
T  31976341 gtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagg 31976268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29857920 - 29857839
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| |||||| ||||||| || || ||||||||||||||||||||||  ||||||||||||||| |||| ||| |||||    
T  29857920 gtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctat 29857839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31953049 - 31953119
Alignment:
Q  13 ggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctatc 83  Q
    ||||||| ||| |||||||||||||||| |||||||||| |  ||||||||||||||||||| | ||||||    
T  31953049 ggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatc 31953119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 4231638 - 4231570
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||||  || |||| ||||||||||||||||||||| | |  |||||||||||||||||    
T  4231638 cttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaa 4231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23128134 - 23128184
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    ||||||||| ||| |||||||||| || |||||||||||||||||||||||    
T  23128134 gtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtc 23128184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28536495 - 28536566
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| ||||||||| |||||   ||||||||||||||||||||||| |  | |||||||||||||||||    
T  28536495 gtgcttgtgtggggtccacatgaccg--tgtcagatttttgtgtgggtgtcaagggttgtattgccacctaagg 28536566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30870107 - 30870058
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    |||||||||||||||||| |||||||||||| |||||||| | |||||||    
T  30870107 gtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 15832666 - 15832589
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| || |||||||||| || ||||| ||||||||||||||||| || | | ||||| ||||||| ||| |||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctat 15832589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 8e-27; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18520891 - 18520972
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  18520891 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 18520972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13811745 - 13811664
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || | ||||||||||||||||||| |||||    
T  13811745 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctat 13811664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 6679787 - 6679720
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  6679787 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaa 6679720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2740367 - 2740294
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||    
T  2740367 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2740294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 28177864 - 28177795
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||| || |||||||||||||||||||    
T  28177864 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 28177795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 35785288 - 35785211
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  35785288 ttgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctat 35785211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36732949 - 36733030
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| |  ||||||||||||||||||||||| || |||||||||| |||||||||| |||||    
T  36732949 gtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctat 36733030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40145500 - 40145419
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||  || ||||||||||||||||||||| |||||    
T  40145500 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctat 40145419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42414309 - 42414379
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  42414309 gtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 42414379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14831907 - 14831826
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || |||||||||||| |||||||||| || |||||||||||||||||| || |||||    
T  14831907 gtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctat 14831826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33149645 - 33149726
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || ||||| ||||||||||||||||| || |||||||| |||||||||||| |||||    
T  33149645 gtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctat 33149726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 3921275 - 3921347
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  3921275 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 3921347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 2252178 - 2252248
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  2252178 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2252248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35943899 - 35943980
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||| ||||||| || || ||||||||||||||||||||||| || | ||||||||||||||||||| |||||    
T  35943899 gtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctat 35943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 21370093 - 21370048
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  21370093 ttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15409617 - 15409690
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| | || ||||||||||||||||||||||| ||   ||||||| |||||||||    
T  15409617 gtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagg 15409690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26720609 - 26720536
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| |||| ||| |||| |||||||||||| ||| |||||  || |||||||||||||||||||    
T  26720609 gtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26720536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26990358 - 26990285
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| |||| ||| |||| |||||||||||| ||| |||||  || |||||||||||||||||||    
T  26990358 gtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26990285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31009081 - 31009032
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  31009081 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 31009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 31132436 - 31132392
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgg 46  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  31132436 tgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 36875644 - 36875691
Alignment:
Q  35 atttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 36875691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 39688911 - 39688979
Alignment:
Q  8 tgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||| |  | ||||||||||| |||||||    
T  39688911 tgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggt 39688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16327994 - 16327912
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctatc 83  Q
    ||||||||| | ||| ||| ||| ||| |||||||||||| |||||||||| |  | ||||||||||||||||| ||| ||||    
T  16327994 gtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatc 16327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 41470425 - 41470462
Alignment:
Q  3 gcttgtgcggggtccacgtgaccacatgtcagattttt 40  Q
    |||||||||||||||||||||| || ||||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagattttt 41470462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 39557534 - 39557594
Alignment:
Q  11 ggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    |||||||| |||| ||| |||||||||||||||||| |||  | ||||||||| |||||||    
T  39557534 ggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6034137 - 6034056
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  6034137 gtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 6034056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41236440 - 41236359
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  41236440 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctat 41236359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11511469 - 11511550
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  11511469 gtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctat 11511550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 42044374 - 42044455
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| ||| | ||||||||||||||||||| |||||    
T  42044374 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctat 42044455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48183056 - 48183137
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||| ||||||| |||||    
T  48183056 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctat 48183137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 50052435 - 50052508
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||    
T  50052435 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 50052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 480454 - 480535
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||| || ||||||||| ||||||||||| |||||    
T  480454 gtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctat 480535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54473540 - 54473621
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||| || ||||||||| ||||||||||| |||||    
T  54473540 gtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctat 54473621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 50526178 - 50526249
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||    
T  50526178 gtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 50526249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 29239979 - 29239898
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| || ||| |||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  29239979 gtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctat 29239898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 17983753 - 17983825
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  17983753 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24995114 - 24995189
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||||||||||| || ||||| |||||| |||||||||| || |||||||||||| ||||||||    
T  24995114 gtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggt 24995189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3481747 - 3481666
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| |  ||||||||||||||||||||||| ||  |||||||||||||||| ||| |||||    
T  3481747 gtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctat 3481666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29234252 - 29234333
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||  ||| || || |||||||||||| |||||||| |||||    
T  29234252 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctat 29234333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 19670726 - 19670798
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||| ||||| |  |||||||||||||||||||||    
T  19670726 cttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggt 19670798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 55475261 - 55475211
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  55475261 ccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 55475211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23608328 - 23608247
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| || || |||||||| || ||||||||||||||||||||||| || ||||||||| || |||||||| |||||    
T  23608328 gtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctat 23608247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 50813902 - 50813971
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||| |  |||||||| |||||||||    
T  50813902 cttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaag 50813971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 55079731 - 55079796
Alignment:
Q  11 ggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    ||||||||  || ||||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  55079731 ggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggt 55079796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 47986298 - 47986226
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || ||||||||||||||||||||||| |||| |  | |||||||||||||||||||    
T  47986298 cttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggt 47986226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31910285 - 31910212
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| | |  ||||||||||||||||||||||| ||  |||||||| |||||||||    
T  31910285 gtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagg 31910212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 32767048 - 32766979
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    ||||||| |||||||  || ||||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  32767048 cttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaag 32766979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41823975 - 41823926
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  41823975 gtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48647733 - 48647806
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||| |||||||||||||| ||| |||||||| |||||||||  | ||||||||||  ||||||||    
T  48647733 gtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagg 48647806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 44536773 - 44536823
Alignment:
Q  21 tgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  44536773 tgaccacatgtcagatttttgtgtggatgt-caagggtgtattgccacctaa 44536823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 8343177 - 8343243
Alignment:
Q  8 tgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||  || ||||||||||||||||| ||| |||||| || | |||||||||||||||||    
T  8343177 tgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaagg 8343243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 18924525 - 18924579
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtat 78  Q
    ||||||||||||||||||||||| | || |  |||||||||||||||||||||||    
T  18924525 ccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtat 18924579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 29547989 - 29548039
Alignment:
Q  24 ccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||||||||||||| |  | |||||||||||||||||    
T  29547989 ccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 29548039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29977978 - 29977908
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    ||||||||| ||||||||  |||| || ||||||||||||||||||||||  |  ||||||||||||||||    
T  29977978 gtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccaccta 29977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28480279 - 28480348
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||  | | |||||||| |||||||||    
T  28480279 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28480348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28481154 - 28481223
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||  | | |||||||| |||||||||    
T  28481154 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28481223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 28482029 - 28482098
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||| ||||||||| |||| |||||||||||||||||||| ||||  | | |||||||| |||||||||    
T  28482029 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28482098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 40574844 - 40574799
Alignment:
Q  29 tgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||    
T  40574844 tgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 40574799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 18769074 - 18769103
Alignment:
Q  21 tgaccacatgtcagatttttgtgtgggtgt 50  Q
    ||||||||||||||||||||||||||||||    
T  18769074 tgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 29589750 - 29589811
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgc 65  Q
    |||||| ||||||||  || |||||| ||||||||||||||||||||| |  ||||||||||    
T  29589750 cttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattgc 29589811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 53352574 - 53352622
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgt 50  Q
    |||||||||||||||||| | || || |||||||||||||||| |||||    
T  53352574 tgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgt 53352622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2582008 - 2581927
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  2582008 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 2581927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 9474887 - 9474964
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  9474887 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 9474964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27564742 - 27564815
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27564742 gtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 27564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38632328 - 38632409
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||  |||||||||||||||||||||||| |||||    
T  38632328 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctat 38632409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48716289 - 48716370
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||| || ||||||||||||||||||||| |||||    
T  48716289 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctat 48716370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3000412 - 3000337
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||    
T  3000412 gtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 3000337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32813340 - 32813267
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||  || |||||||||||||||||||    
T  32813340 gtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagg 32813267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 50630551 - 50630470
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||  | || | |||||||||||||||||||||||||    
T  50630551 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctat 50630470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 5959010 - 5959082
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  5959010 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggt 5959082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8346395 - 8346466
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||    
T  8346395 gtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaa 8346466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38595247 - 38595176
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||    
T  38595247 gtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 38595176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44548383 - 44548454
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| || || |||||||||||||||||    
T  44548383 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaa 44548454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51898690 - 51898761
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| || |||||||||||||||||    
T  51898690 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 51898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6260963 - 6260881
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctatc 83  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||||| ||  |||||||| |||||||||| ||||||||    
T  6260963 gtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatc 6260881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 47452327 - 47452408
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || ||| ||||||||||||||||||| || |||||||| |||||||||||| |||||    
T  47452327 gtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctat 47452408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 50591010 - 50591082
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || |||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  50591010 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 50591082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48489393 - 48489328
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgcca 67  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  48489393 gtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtcc-agggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11152385 - 11152458
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||| || |||| || |||||||||||||||||| |||| || |||||||||||||||||||    
T  11152385 gtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 45044571 - 45044640
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||| ||| | ||||||||||||||||| |||||||| || |||||||||||||||||||    
T  45044571 ttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37649291 - 37649220
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||  | ||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||    
T  37649291 gtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaa 37649220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44454072 - 44453991
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||| || | || ||||||||||| ||| ||| |||||    
T  44454072 gtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctat 44453991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 43225 - 43153
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||| || | ||||||| | ||||||    
T  43225 gtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaag 43153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13414854 - 13414791
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattg 64  Q
    ||||||||| |||||||||||||| || ||| ||||||||||||||||||| || |||||||||    
T  13414854 gtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 41608503 - 41608573
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||| |||||||||  || |||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  41608503 cttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagg 41608573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 41758894 - 41758832
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgcca 67  Q
    |||||||||||||| ||||| || |||||||||||||||||| |||| || ||||||||||||    
T  41758894 ttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgcca 41758832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 47748532 - 47748459
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtat 78  Q
    |||||||||| ||||  || ||||||||||||||||| | ||||||| ||| |||||||||||||||||||||||    
T  47748532 cttgtgcgggatccatatggccacatgtcagatttttatatgggtgt-caagggtgtattgccacctaagggtat 47748459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26440827 - 26440745
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctatc 83  Q
    |||||| |||||| |||| ||| |||| ||||||||||||||||||||||  || ||||||||| || |||||| | ||||||    
T  26440827 gtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatc 26440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 37926448 - 37926526
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||| |||| |||| ||| |||| |||||||||||| |||||||||  |||| ||||||||||||||| | |||||||    
T  37926448 cttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctat 37926526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 26274522 - 26274444
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||| || |||||||||| |  |||||||||||| ||||| |||| || | ||||||||||| ||||||| |||||    
T  26274522 cttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctat 26274444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 49811562 - 49811616
Alignment:
Q  29 tgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctatc 83  Q
    |||||||||||||||||| |||| || ||||||||| ||||||||| | ||||||    
T  49811562 tgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatc 49811616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3784088 - 3784007
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||| |||||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  3784088 gtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctat 3784007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7389482 - 7389401
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| ||  |||||||||||||||||||| |||||    
T  7389482 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctat 7389401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19329935 - 19329862
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19329935 gtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 19329862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38837310 - 38837229
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||    
T  38837310 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctat 38837229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 4999525 - 4999602
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||| || | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  4999525 ttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctat 4999602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8080390 - 8080471
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || |||||||||||| ||| |||||| || ||||||||||||||||||||| |||||    
T  8080390 gtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctat 8080471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 35137622 - 35137545
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||| || ||||||||||||||||||||| |||||    
T  35137622 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctat 35137545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 36361920 - 36362001
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||| || | ||||||||||||||||||| |||||    
T  36361920 gtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctat 36362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38267133 - 38267052
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||| || ||||||||| ||| ||||||| |||||    
T  38267133 gtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctat 38267052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3434655 - 3434582
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| |||||||||| || |||||| |||||||||||||||| || |||||||||||||||||||    
T  3434655 gtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaagg 3434582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 19436194 - 19436267
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||| |||||| |||||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||    
T  19436194 gtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagg 19436267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36362119 - 36362038
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||||| || | |||||| |||||||||||| |||||    
T  36362119 gtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctat 36362038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3694460 - 3694385
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    ||||||||||||| ||||| |||| || ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  3694460 gtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggt 3694385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 8238303 - 8238236
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  8238303 cttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 8238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36208266 - 36208185
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||| |    |||||| |||||||||||| |||||    
T  36208266 gtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctat 36208185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46374809 - 46374882
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||  || ||||| |||||||||||||    
T  46374809 gtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaagg 46374882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 22343451 - 22343379
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  ||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  22343451 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 22343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 41915831 - 41915759
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || ||||||||||||||||||||| |||||| |  |||||||||||||||||||||    
T  41915831 cttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggt 41915759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 2318261 - 2318320
Alignment:
Q  12 gggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccaccta 71  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||    
T  2318261 gggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccaccta 2318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40957800 - 40957719
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| |||| |||||||||| || |||||||||||||||||||| || ||  ||||||||||||||||| || |||||    
T  40957800 gtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctat 40957719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 7727996 - 7727924
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  |||||||||||||||||||| ||||  |||| | ||||||||| ||||||||||||    
T  7727996 cttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggt 7727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 32564437 - 32564505
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaag 73  Q
    ||||||||||||||  |  |||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  32564437 ttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaag 32564505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 38044287 - 38044215
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    |||||||||||||||  || | ||||||||||||||||||||| |||| |  |||||||||||||||||||||    
T  38044287 cttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggt 38044215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 46033809 - 46033889
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||| || || |||||||| |||||||||||| |||||||||  || ||||||||||||||||||  |||||||    
T  46033809 tgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctat 46033889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18207272 - 18207200
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||| ||||| |||||| |||| ||| |||||||||| |||||||| | ||||||||||||||||||||    
T  18207272 gtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaagg 18207200  T

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Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35522969 - 35522896
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||| ||||  || |||| ||||||||||||||||||||||  || ||||||||||||| |||||    
T  35522969 gtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagg 35522896  T

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Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 41423774 - 41423704
Alignment:
Q  2 tgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||| |||| || |||||||||||||||||||||||||||  ||||| | ||||||||| ||| ||||    
T  41423774 tgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaa 41423704  T

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Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 10343598 - 10343651
Alignment:
Q  29 tgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    ||||||||||||||||||||||| | | ||||||| |||||||||||| |||||    
T  10343598 tgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctat 10343651  T

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Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21234494 - 21234421
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||||| || ||| | || ||||| ||||||||||| ||||| || ||||||||| |||||||||    
T  21234494 gtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaagg 21234421  T

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Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32951500 - 32951545
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgg 46  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||    
T  32951500 gtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgg 32951545  T

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Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 40846124 - 40846193
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    ||||||||||||||  | || |||||| |||||||||||||| |||| |  |||||||||||||||||||    
T  40846124 ttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaagg 40846193  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27744316 - 27744363
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggt 48  Q
    |||||| || ||| |||||||| |||||||||||||||||||||||||    
T  27744316 gtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggt 27744363  T

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Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12310997 - 12310918
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| | || |||||||||||||||||||||||||||| ||| | |||  || | |||| |||||||||||| |||||    
T  12310997 gtgcttgttcaggatccacgtgaccacatgtcagatttttgtatggatatcc--agatatatttccacctaagggtgtctat 12310918  T

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Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16374831 - 16374881
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||| ||||    
T  16374831 gtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtc 16374881  T

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Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 39255934 - 39256003
Alignment:
Q  4 cttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagg 74  Q
    |||||| || ||||||||| |||| |||||||||||||| ||||| || |  |||||||||||||||||||    
T  39255934 cttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaagg 39256003  T

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Target: scaffold0018 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 152587 - 152516
Alignment:
Q  5 ttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggt 76  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggt 152516  T

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Target: scaffold0316 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17147 - 17097
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtc 51  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  17147 gtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

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Target: scaffold0237 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4122 - 4041
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||| |||||| ||||||| || || ||||||||||||||||||||||  ||||||||||||||| |||| ||| |||||    
T  4122 gtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctat 4041  T

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Target: scaffold0321 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10116 - 10197
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaagggtatctat 82  Q
    |||||||| || |||||||||||| || |||||||||||| ||||| |||| || | ||||||||||||||| ||| |||||    
T  10116 gtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctat 10197  T

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Target: scaffold1268 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 936 - 1007
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||| | |||||||| || |||||| ||||||||||| |||  || |||||||||||||||||    
T  936 gtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaa 1007  T

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Target: scaffold1267 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 936 - 1007
Alignment:
Q  1 gtgcttgtgcggggtccacgtgaccacatgtcagatttttgtgtgggtgtccaaaggtgtattgccacctaa 72  Q
    ||||||||||||| | |||||||| || |||||| ||||||||||| |||  || |||||||||||||||||    
T  936 gtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaa 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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