View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15341_low_5 (Length: 429)

Name: NF15341_low_5
Description: NF15341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15341_low_5
NF15341_low_5
[»] chr3 (38 HSPs)
chr3 (105-415)||(47884026-47884350)
chr3 (18-104)||(40848521-40848608)
chr3 (18-105)||(42672977-42673065)
chr3 (18-107)||(24485426-24485516)
chr3 (18-107)||(42673262-42673352)
chr3 (18-104)||(48159897-48159985)
chr3 (18-107)||(48160299-48160390)
chr3 (18-107)||(10348765-10348856)
chr3 (18-107)||(53688269-53688359)
chr3 (18-112)||(27238866-27238962)
chr3 (18-104)||(40848927-40849015)
chr3 (18-107)||(42456161-42456250)
chr3 (18-101)||(24485025-24485109)
chr3 (18-104)||(26007182-26007269)
chr3 (18-107)||(53766160-53766251)
chr3 (18-92)||(3353517-3353591)
chr3 (18-104)||(36180556-36180642)
chr3 (18-109)||(3353123-3353213)
chr3 (18-102)||(22429562-22429647)
chr3 (18-104)||(27238465-27238553)
chr3 (18-104)||(53687888-53687976)
chr3 (18-110)||(36180956-36181050)
chr3 (18-105)||(47666301-47666390)
chr3 (18-107)||(44008367-44008457)
chr3 (18-103)||(22429159-22429246)
chr3 (28-105)||(21896487-21896565)
chr3 (18-92)||(26007585-26007659)
chr3 (18-107)||(44007964-44008055)
chr3 (52-103)||(17372594-17372645)
chr3 (21-101)||(1928403-1928484)
chr3 (42-104)||(53766569-53766633)
chr3 (50-107)||(3644781-3644840)
chr3 (21-106)||(8314011-8314098)
chr3 (18-104)||(47665911-47665999)
chr3 (53-104)||(45060872-45060925)
chr3 (52-104)||(47871122-47871175)
chr3 (52-105)||(17372297-17372352)
chr3 (43-104)||(42455790-42455853)
[»] chr6 (23 HSPs)
chr6 (18-105)||(33974265-33974354)
chr6 (18-107)||(22684324-22684414)
chr6 (18-107)||(22754654-22754744)
chr6 (18-105)||(10087824-10087913)
chr6 (20-107)||(32733964-32734053)
chr6 (18-104)||(2354776-2354864)
chr6 (18-104)||(7654514-7654602)
chr6 (18-87)||(29074338-29074407)
chr6 (18-87)||(29079102-29079171)
chr6 (18-87)||(29106911-29106980)
chr6 (18-103)||(22755055-22755142)
chr6 (18-104)||(13177022-13177109)
chr6 (18-107)||(2354406-2354496)
chr6 (28-107)||(33828987-33829068)
chr6 (18-92)||(32733570-32733645)
chr6 (28-104)||(33829612-33829690)
chr6 (18-92)||(13176633-13176707)
chr6 (52-113)||(13579651-13579713)
chr6 (50-107)||(3403714-3403773)
chr6 (59-114)||(30388052-30388108)
chr6 (52-101)||(3825530-3825580)
chr6 (52-104)||(10039676-10039729)
chr6 (53-104)||(31598274-31598326)
[»] chr1 (52 HSPs)
chr1 (18-107)||(27172113-27172203)
chr1 (18-107)||(9347123-9347214)
chr1 (18-107)||(48105082-48105173)
chr1 (18-107)||(13918443-13918534)
chr1 (18-103)||(13918833-13918920)
chr1 (18-107)||(26814691-26814782)
chr1 (18-104)||(20480168-20480255)
chr1 (18-106)||(50430047-50430137)
chr1 (18-102)||(50526438-50526524)
chr1 (18-107)||(50615587-50615677)
chr1 (18-107)||(50623415-50623505)
chr1 (18-104)||(28633720-28633808)
chr1 (18-104)||(32163009-32163097)
chr1 (18-104)||(46824244-46824332)
chr1 (18-109)||(49318132-49318224)
chr1 (18-104)||(999491-999578)
chr1 (18-104)||(9347517-9347604)
chr1 (18-107)||(20371318-20371409)
chr1 (18-104)||(20371040-20371126)
chr1 (17-109)||(20480579-20480670)
chr1 (18-101)||(28634123-28634208)
chr1 (18-101)||(46823846-46823931)
chr1 (18-101)||(48104681-48104766)
chr1 (18-107)||(47498298-47498387)
chr1 (18-104)||(50429656-50429744)
chr1 (18-101)||(999115-999199)
chr1 (18-104)||(6703460-6703548)
chr1 (18-107)||(21687022-21687113)
chr1 (18-105)||(49317751-49317839)
chr1 (18-106)||(6703860-6703950)
chr1 (20-104)||(26815087-26815173)
chr1 (18-101)||(42611188-42611273)
chr1 (18-101)||(44911403-44911488)
chr1 (18-107)||(49318409-49318499)
chr1 (18-104)||(4692399-4692487)
chr1 (18-106)||(42611580-42611670)
chr1 (18-87)||(44911044-44911113)
chr1 (18-104)||(4692022-4692109)
chr1 (20-104)||(19008718-19008804)
chr1 (25-104)||(27172514-27172595)
chr1 (18-87)||(50949531-50949600)
chr1 (18-101)||(44224085-44224169)
chr1 (30-104)||(21687445-21687520)
chr1 (38-85)||(32162750-32162797)
chr1 (28-104)||(49284409-49284487)
chr1 (28-107)||(6002234-6002315)
chr1 (21-104)||(39691969-39692054)
chr1 (52-104)||(13589659-13589712)
chr1 (44-104)||(19007735-19007796)
chr1 (28-72)||(6002870-6002914)
chr1 (50-107)||(48190768-48190827)
chr1 (30-107)||(50949158-50949237)
[»] chr7 (36 HSPs)
chr7 (18-106)||(3204667-3204755)
chr7 (18-107)||(37888830-37888921)
chr7 (18-106)||(13741555-13741645)
chr7 (18-105)||(9035259-9035348)
chr7 (18-104)||(10533034-10533122)
chr7 (18-104)||(37889225-37889313)
chr7 (18-104)||(37972362-37972450)
chr7 (18-104)||(13744199-13744286)
chr7 (18-101)||(20418891-20418976)
chr7 (18-104)||(20419290-20419378)
chr7 (18-104)||(22740156-22740244)
chr7 (18-104)||(37971960-37972048)
chr7 (18-104)||(38826879-38826967)
chr7 (18-107)||(29293312-29293403)
chr7 (18-105)||(48359319-48359407)
chr7 (18-106)||(36527764-36527854)
chr7 (18-101)||(18863970-18864055)
chr7 (18-104)||(3205059-3205147)
chr7 (18-104)||(17156967-17157055)
chr7 (18-101)||(22740557-22740641)
chr7 (18-104)||(18864368-18864455)
chr7 (18-100)||(48359624-48359707)
chr7 (18-104)||(29292922-29293010)
chr7 (18-87)||(42418610-42418679)
chr7 (18-101)||(42418994-42419079)
chr7 (18-101)||(36527387-36527471)
chr7 (18-104)||(9034867-9034956)
chr7 (28-104)||(13863313-13863391)
chr7 (28-107)||(44599486-44599567)
chr7 (42-104)||(16198967-16199031)
chr7 (50-103)||(18925320-18925373)
chr7 (28-104)||(44600111-44600189)
chr7 (52-113)||(13772901-13772964)
chr7 (28-104)||(13863933-13864010)
chr7 (59-107)||(27096044-27096093)
chr7 (59-107)||(27182210-27182259)
[»] chr4 (41 HSPs)
chr4 (18-107)||(169405-169496)
chr4 (20-104)||(23539841-23539925)
chr4 (18-107)||(32703616-32703707)
chr4 (20-106)||(4239334-4239422)
chr4 (18-104)||(28196739-28196827)
chr4 (18-103)||(25161879-25161966)
chr4 (18-103)||(43292038-43292125)
chr4 (18-106)||(43292323-43292413)
chr4 (18-104)||(9023244-9023332)
chr4 (18-104)||(9380307-9380395)
chr4 (18-104)||(9380707-9380795)
chr4 (18-104)||(26207712-26207800)
chr4 (18-104)||(28196346-28196434)
chr4 (18-104)||(39744431-39744519)
chr4 (18-104)||(169013-169102)
chr4 (18-114)||(39744020-39744118)
chr4 (18-104)||(44468889-44468975)
chr4 (18-104)||(293183-293271)
chr4 (18-104)||(9023646-9023734)
chr4 (20-104)||(48405962-48406047)
chr4 (18-104)||(26207361-26207448)
chr4 (18-105)||(23540218-23540307)
chr4 (18-105)||(39086589-39086678)
chr4 (18-104)||(32703225-32703313)
chr4 (18-87)||(48406351-48406420)
chr4 (25-104)||(39912054-39912134)
chr4 (22-104)||(292782-292866)
chr4 (18-104)||(25162279-25162365)
chr4 (21-104)||(36095817-36095902)
chr4 (18-84)||(12757788-12757854)
chr4 (18-107)||(39912453-39912543)
chr4 (18-101)||(12758170-12758254)
chr4 (28-104)||(43051228-43051306)
chr4 (28-104)||(50678779-50678857)
chr4 (28-107)||(36096451-36096532)
chr4 (28-106)||(50679400-50679480)
chr4 (50-106)||(16555815-16555873)
chr4 (52-106)||(27304716-27304770)
chr4 (52-104)||(3930480-3930533)
chr4 (42-104)||(56505693-56505757)
chr4 (28-72)||(45830172-45830216)
[»] scaffold0176 (2 HSPs)
scaffold0176 (18-104)||(19621-19708)
scaffold0176 (18-104)||(20009-20097)
[»] scaffold0017 (2 HSPs)
scaffold0017 (18-106)||(185240-185330)
scaffold0017 (18-103)||(184840-184927)
[»] scaffold0041 (2 HSPs)
scaffold0041 (18-104)||(38661-38749)
scaffold0041 (18-72)||(38285-38339)
[»] chr5 (43 HSPs)
chr5 (18-104)||(12498567-12498655)
chr5 (18-104)||(26571130-26571218)
chr5 (18-115)||(21207215-21207314)
chr5 (18-101)||(43463759-43463843)
chr5 (18-104)||(37780320-37780407)
chr5 (18-113)||(12498894-12498991)
chr5 (18-103)||(22729406-22729492)
chr5 (18-87)||(19514545-19514614)
chr5 (18-104)||(25940521-25940609)
chr5 (18-106)||(3888237-3888327)
chr5 (18-104)||(37610202-37610289)
chr5 (18-104)||(43464158-43464245)
chr5 (18-104)||(34147141-34147227)
chr5 (18-107)||(37610584-37610674)
chr5 (20-107)||(2817543-2817631)
chr5 (18-103)||(25940980-25941067)
chr5 (18-109)||(26570724-26570817)
chr5 (18-104)||(19514929-19515017)
chr5 (18-104)||(34147476-34147564)
chr5 (25-107)||(37780715-37780799)
chr5 (20-101)||(2817152-2817235)
chr5 (18-101)||(10098907-10098991)
chr5 (18-101)||(3888628-3888713)
chr5 (25-106)||(22729006-22729088)
chr5 (23-106)||(10098517-10098602)
chr5 (18-101)||(41072180-41072264)
chr5 (18-92)||(11316940-11317014)
chr5 (28-114)||(18816940-18817030)
chr5 (20-107)||(30401879-30401968)
chr5 (28-106)||(18817587-18817667)
chr5 (50-113)||(22429194-22429258)
chr5 (21-104)||(42919305-42919389)
chr5 (28-104)||(11350808-11350885)
chr5 (60-107)||(12441320-12441367)
chr5 (53-107)||(23011076-23011131)
chr5 (18-101)||(11316717-11316802)
chr5 (30-78)||(11351405-11351453)
chr5 (50-105)||(34577162-34577218)
chr5 (50-101)||(9665560-9665611)
chr5 (50-106)||(18433013-18433071)
chr5 (50-104)||(26020450-26020506)
chr5 (50-87)||(34576885-34576922)
chr5 (59-104)||(16466749-16466796)
[»] chr2 (38 HSPs)
chr2 (18-108)||(26692786-26692878)
chr2 (18-107)||(7664639-7664730)
chr2 (18-104)||(7979969-7980056)
chr2 (18-104)||(7979567-7979653)
chr2 (18-101)||(8851151-8851236)
chr2 (18-108)||(19141815-19141905)
chr2 (18-104)||(8851548-8851636)
chr2 (18-83)||(17851368-17851433)
chr2 (19-107)||(17850975-17851064)
chr2 (18-105)||(16910826-16910915)
chr2 (18-103)||(16911235-16911321)
chr2 (25-104)||(37720204-37720285)
chr2 (18-101)||(41790494-41790578)
chr2 (18-102)||(6325313-6325399)
chr2 (20-104)||(7664248-7664334)
chr2 (18-87)||(6324936-6325005)
chr2 (23-103)||(18750097-18750178)
chr2 (20-104)||(5378661-5378747)
chr2 (20-101)||(26692399-26692482)
chr2 (18-101)||(5793450-5793535)
chr2 (18-104)||(41790878-41790966)
chr2 (18-113)||(18749717-18749813)
chr2 (28-104)||(2638820-2638898)
chr2 (20-104)||(5379927-5380013)
chr2 (18-102)||(19141446-19141531)
chr2 (28-104)||(2639458-2639536)
chr2 (28-104)||(26841587-26841665)
chr2 (28-107)||(26842214-26842295)
chr2 (28-105)||(38490817-38490895)
chr2 (52-104)||(26737482-26737534)
chr2 (28-87)||(7591220-7591279)
chr2 (28-87)||(18296095-18296154)
chr2 (28-107)||(7591826-7591907)
chr2 (52-107)||(11883926-11883983)
chr2 (52-107)||(40469424-40469481)
chr2 (50-104)||(24832331-24832387)
chr2 (59-107)||(43495612-43495661)
chr2 (59-104)||(43495309-43495356)
[»] chr8 (39 HSPs)
chr8 (18-115)||(37396697-37396796)
chr8 (18-113)||(6199062-6199159)
chr8 (18-109)||(9623497-9623590)
chr8 (18-104)||(24473734-24473822)
chr8 (18-104)||(41662521-41662609)
chr8 (18-101)||(25439092-25439176)
chr8 (20-104)||(20861606-20861692)
chr8 (19-107)||(37397112-37397202)
chr8 (18-113)||(34498113-34498210)
chr8 (18-104)||(17431287-17431375)
chr8 (18-107)||(24473340-24473431)
chr8 (18-83)||(33727071-33727136)
chr8 (18-102)||(15444213-15444299)
chr8 (20-104)||(34498523-34498609)
chr8 (18-107)||(16169171-16169261)
chr8 (18-72)||(6198692-6198746)
chr8 (18-92)||(15444613-15444687)
chr8 (18-104)||(2856526-2856614)
chr8 (42-107)||(25438789-25438856)
chr8 (28-107)||(39724024-39724105)
chr8 (28-104)||(13936723-13936800)
chr8 (28-104)||(6092777-6092853)
chr8 (28-113)||(13027257-13027344)
chr8 (18-107)||(16169573-16169664)
chr8 (28-104)||(9823337-9823415)
chr8 (52-107)||(34313762-34313817)
chr8 (28-107)||(3307335-3307416)
chr8 (54-114)||(43162224-43162285)
chr8 (21-102)||(15442765-15442848)
chr8 (52-113)||(16929242-16929305)
chr8 (28-104)||(13026635-13026713)
chr8 (50-106)||(37752082-37752140)
chr8 (28-107)||(9822745-9822826)
chr8 (28-107)||(22851387-22851468)
chr8 (52-101)||(9465874-9465923)
chr8 (53-106)||(3463946-3464001)
chr8 (52-104)||(18020088-18020140)
chr8 (50-107)||(23123335-23123394)
chr8 (59-115)||(43597790-43597845)
[»] scaffold0460 (2 HSPs)
scaffold0460 (25-107)||(736-819)
scaffold0460 (18-104)||(330-418)
[»] scaffold0069 (2 HSPs)
scaffold0069 (18-107)||(50472-50563)
scaffold0069 (18-104)||(50075-50161)
[»] scaffold0029 (2 HSPs)
scaffold0029 (18-104)||(9905-9994)
scaffold0029 (44-111)||(10311-10378)
[»] scaffold0328 (2 HSPs)
scaffold0328 (28-106)||(6150-6230)
scaffold0328 (28-104)||(6771-6849)
[»] scaffold0015 (1 HSPs)
scaffold0015 (52-106)||(16851-16905)
[»] scaffold0009 (2 HSPs)
scaffold0009 (52-104)||(205687-205740)
scaffold0009 (52-101)||(205861-205909)
[»] scaffold0376 (2 HSPs)
scaffold0376 (45-104)||(7455-7515)
scaffold0376 (59-110)||(7607-7659)
[»] scaffold0319 (1 HSPs)
scaffold0319 (52-105)||(6697-6751)
[»] scaffold0001 (1 HSPs)
scaffold0001 (52-107)||(438927-438984)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-100; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 105 - 415
Target Start/End: Complemental strand, 47884350 - 47884026
Alignment:
Q  105 aaatatttataagcggcctatatcaaaaggtagaatctcnnnnnnnntgaaaggtgacctaannnnnnnnattttaaggtatgaaaggtggtataaatga 204  Q
    ||||||||||||||||||||||| |||||||||||||||        |||||||||||||||        |||||||||||||||||||||||||||| |    
T  47884350 aaatatttataagcggcctatattaaaaggtagaatctcaaaaaaa-tgaaaggtgacctaattttttt-attttaaggtatgaaaggtggtataaatta 47884253  T
Q  205 gtccggttatgctccattta-------ttcc--------cgtttagggtc-aaaaaatatttaagggttgagatttaataaataaagaaattatgtcctc 288  Q
    |||||| |||||||||||||       ||||        | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47884252 gtccggatatgctccatttaccctattttccatttactccatttagggtctaaaaaatatttaagggttgagatttaataaataaagaaattatgtcctc 47884153  T
Q  289 ttgttccctcttcctctgtacgcacgaccactttgcccacttcctctcaacgccgccgccaccatcaacttccgtccaccaccatcaatcacaactccta 388  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47884152 ttgttccctcttcctctgtacgcacgaccactttgcccactttctctcaacgccgccgccaccatcaacttccgtccaccaccatcaatcacaactccta 47884053  T
Q  389 tctcttccccttcctcttatttctccc 415  Q
    |||||||||||||||||||||||||||    
T  47884052 tctcttccccttcctcttatttctccc 47884026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 40848608 - 40848521
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  40848608 actatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 40848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 42673065 - 42672977
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||    
T  42673065 actatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcca 42672977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 24485426 - 24485516
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg-gaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  24485426 actatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagccaaa 24485516  T

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Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 42673262 - 42673352
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  42673262 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaa 42673352  T

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Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 48159985 - 48159897
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  48159985 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 48159897  T

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Target: chr3; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 48160299 - 48160390
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||| ||| |||||||||||||||    
T  48160299 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagccaaa 48160390  T

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Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 10348765 - 10348856
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaa-tgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| | ||||||| |||||||||||||||    
T  10348765 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagccaaa 10348856  T

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Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 53688269 - 53688359
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggga-aaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  53688269 actatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagccaaa 53688359  T

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Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 27238866 - 27238962
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagccaaatattt 112  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||  ||||||||| ||||||||| ||||| ||||    
T  27238866 actatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaaaattt 27238962  T

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Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 40848927 - 40849015
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||| |||||||||  ||||||||| ||||||||||||    
T  40848927 actatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcc 40849015  T

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Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 42456161 - 42456250
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |  |||| |||||| ||| |||||||||||||||    
T  42456161 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggggaactttagggggaaagtgcaattaagccaaa 42456250  T

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Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 24485109 - 24485025
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaa 101  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| ||||||    
T  24485109 actatagggggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaatgtaattaa 24485025  T

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Target: chr3; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 26007269 - 26007182
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||| ||||||||||||||||    
T  26007269 actatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagcc 26007182  T

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Target: chr3; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 53766251 - 53766160
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaa-tgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||| ||||||||| |||||    
T  53766251 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaaccaaa 53766160  T

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Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 3353517 - 3353591
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa 92  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||    
T  3353517 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaa 3353591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 36180642 - 36180556
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||||||||| |||||||| ||||||||||||||||| || ||||||||||||||  ||||||||||||||||  ||||||||||||    
T  36180642 actataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggaaatgtgcaattaagcc 36180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 3353213 - 3353123
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaata 109  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||||||    
T  3353213 actataggggg--aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaata 3353123  T

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Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 22429562 - 22429647
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaag 102  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||| || ||| ||||||||||    
T  22429562 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaag 22429647  T

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Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 27238553 - 27238465
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||  ||||||| | ||||||||||    
T  27238553 actatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcc 27238465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 53687976 - 53687888
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  53687976 actatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 53687888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 36180956 - 36181050
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaatat 110  Q
    ||||||||||  ||||||| |||||||||||||||||||  ||||||||||||||| |||||||||||  |||||| |||||||||||| |||||    
T  36180956 actataggggaaaaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcctaatat 36181050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 47666301 - 47666390
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| |||||| |||| |||||||| ||||| |||||||| ||||||||||  |||||||| |||||||||||||    
T  47666301 actatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcca 47666390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 44008367 - 44008457
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||| ||||| | ||||||||||||||| |||| ||||| |||||||| ||||||||||||  ||||| |||||||||||||||    
T  44008367 actatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagccaaa 44008457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 22429246 - 22429159
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagc 103  Q
    |||||||||| |||||||| |||||||||||||| ||||| ||| |||||||||| ||||| |||||||  ||||| |||||||||||    
T  22429246 actataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 21896487 - 21896565
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg-aaaaatgcaattaagcca 105  Q
    ||||||||| |||| |||||| |||||||| ||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  21896487 gcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcca 21896565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 26007585 - 26007659
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa 92  Q
    ||||||||||||||||||| |||||||||| ||||  ||| ||||||| |||||| |||||||||||||| ||||    
T  26007585 actatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaa 26007659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 44008055 - 44007964
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| ||||||||||||||  | || ||| | ||||||||   ||||||||||  |||||| |||||||||||||||    
T  44008055 actatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagccaaa 44007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagc 103  Q
    |||||| |||||||||||||||| ||| |||||||||||| |||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatataggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 1928403 - 1928484
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg-gaaaaatgcaattaa 101  Q
    |||||| |||||| |  |||||||||| ||||||||| |||||||||||||| |||||  |||||| | |||||||||||||    
T  1928403 atagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 53766569 - 53766633
Alignment:
Q  42 ttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||| ||||| ||||| |||||||| ||||||||||  |||||||| ||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcc 53766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 3644781 - 3644840
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||| ||||||||||||||| ||||  |||  ||||||||||||||||||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagccaaa 3644840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 8314098 - 8314011
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaa 106  Q
    |||||| |||||||||  |||||||||  || ||||| ||||||||||||||  |||| |||||||  ||||| ||||||||||||||    
T  8314098 atagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagccaa 8314011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 47665999 - 47665911
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat-aggggaaaaa-tgcaattaagcc 104  Q
    |||||||| || ||||||  |||||| |||| ||| |||| ||||||||||||||  |||||||| |||||||||| ||||||||||||    
T  47665999 actataggtggtaaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcc 47665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 45060872 - 45060925
Alignment:
Q  53 gggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||||||||||  ||||||  ||||| ||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcc 45060925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 47871122 - 47871175
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  ||| |||||||| ||||||||||||    
T  47871122 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 47871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 17372352 - 17372297
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaa--tgcaattaagcca 105  Q
    |||||| ||||||||||||||||||||  ||||||| ||||  |||||||||||||    
T  17372352 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcca 17372297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 42455853 - 42455790
Alignment:
Q  43 taaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||| ||| | ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 42455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 33974265 - 33974354
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  33974265 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcca 33974354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 22684324 - 22684414
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat-aggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||| |||||||||||||||    
T  22684324 actatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagccaaa 22684414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 22754744 - 22754654
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat-aggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||| |||||||||||||||    
T  22754744 actatagggggcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagccaaa 22754654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 10087824 - 10087913
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |  |||||||| |||||||||||||    
T  10087824 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcca 10087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 32733964 - 32734053
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||  |||||| ||||||||| |||||    
T  32733964 tatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaaccaaa 32734053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 2354776 - 2354864
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||| | |||||| |||| |||||||| ||||||||||||||  ||||||||||  ||||||||||||||||||||    
T  2354776 actatagggggcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcc 2354864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 7654514 - 7654602
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  7654514 actatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 7654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 29074338 - 29074407
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  29074338 actataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggg 29074407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 29079102 - 29079171
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  29079102 actataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggg 29079171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 29106911 - 29106980
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||    
T  29106911 actataggggggaaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggg 29106980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 22755055 - 22755142
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagc 103  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||| ||||  ||||||||  ||||||||| |||||||||||    
T  22755055 actatagggggcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13177022 - 13177109
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||  || |||||| |||||||| ||||| ||||||    
T  13177022 actataaggggcaaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagggggaaaagtgcaactaagcc 13177109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 2354496 - 2354406
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||| ||||||| |||||| |||| ||||| || ||||||| ||||||   |||||||| ||||||||||||||||||||||||    
T  2354496 actatagggggaaaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagggggaaaaatgcaattaagccaaa 2354406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 33829068 - 33828987
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| |||||||||||||||    
T  33829068 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 33828987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 32733645 - 32733570
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag-gggaaaaa 92  Q
    |||||||| |||||||| | ||||||||||||||||| || ||||||| | |||| ||||||||||| ||||||||    
T  32733645 actataggaggcaaaattgctcgtttaaaactatgggatgcaaaatcgtataattggcaaactatagagggaaaaa 32733570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 33829612 - 33829690
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  33829612 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 13176707 - 13176633
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa 92  Q
    ||||||||||||||||||| || |||||||  ||||| |  ||||||| |||||| ||||||||||||| |||||    
T  13176707 actatagggggcaaaatcgctcatttaaaatcatgggatacaaaatcgtacaattggcaaactatagggaaaaaa 13176633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 13579651 - 13579713
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggg-gaaaaatgcaattaagccaaatattta 113  Q
    |||||| ||||||||||||||||||||| |||||| ||||| |||||||||||| || |||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcctaaaattta 13579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 3403773 - 3403714
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||| ||||||||||||||||||||  |||  |||||||| |||||||||||||||    
T  3403773 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaa 3403714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 30388108 - 30388052
Alignment:
Q  59 aaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagccaaatatttat 114  Q
    ||||||||||||||||||||  |||||||  ||| ||||||||||||||||||||||    
T  30388108 aaaatcgcacaattagcaaaagataggggggaaagtgcaattaagccaaatatttat 30388052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    |||||| |||||||||||||||||||| |||| |||||||| |||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 10039729 - 10039676
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  ||| |||||||| ||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 10039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 31598274 - 31598326
Alignment:
Q  53 gggtgtaaaatcgcacaattagcaaactatag-gggaaaaatgcaattaagcc 104  Q
    ||||| ||||||||||||||||||||  |||| ||||||||| ||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaatacaattaagcc 31598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 27172203 - 27172113
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  27172203 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaa 27172113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 9347214 - 9347123
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  9347214 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 9347123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 48105082 - 48105173
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  48105082 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagccaaa 48105173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 13918534 - 13918443
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaa-tgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  13918534 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagccaaa 13918443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 13918833 - 13918920
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagc 103  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||  |||||| |||||||||||    
T  13918833 actatagggggcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 26814782 - 26814691
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||  |||||| |||||||||||||||    
T  26814782 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaa 26814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 20480255 - 20480168
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  20480255 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 50430047 - 50430137
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||| ||||    
T  50430047 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccaa 50430137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 50526438 - 50526524
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaag 102  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||| ||||||||||    
T  50526438 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 50615587 - 50615677
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  50615587 actatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaa 50615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 50623415 - 50623505
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  50623415 actatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagccaaa 50623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 28633808 - 28633720
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||  |||||||| ||||||||||||    
T  28633808 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcc 28633720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 32163009 - 32163097
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  32163009 actataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32163097  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 46824244 - 46824332
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaa-tgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||||||    
T  46824244 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T

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Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 49318132 - 49318224
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaata 109  Q
    ||||||||||||||||||| |||||| |||||||||| || |||||||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  49318132 actatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagccaaata 49318224  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 999491 - 999578
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||| ||||| |||||||| ||||||||||||    
T  999491 actatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcc 999578  T

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Target: chr1; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 9347517 - 9347604
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||| ||||||||||||    
T  9347517 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagcc 9347604  T

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Target: chr1; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 20371318 - 20371409
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactat-ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||| | |||||||||||||| |||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  20371318 actatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaa 20371409  T

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Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 20371126 - 20371040
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||  ||||||||||||| ||| ||||||||||||    
T  20371126 actacagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatagggggaaagtgcaattaagcc 20371040  T

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Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 20480579 - 20480670
Alignment:
Q  17 cactatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaata 109  Q
    ||||||||||||  |||||| |||||||||||||| ||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  20480579 cactataggggg--aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaata 20480670  T

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Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28634123 - 28634208
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| |||||||||    
T  28634123 actatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 46823931 - 46823846
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||  |||||||| |||||||||    
T  46823931 actatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

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Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48104766 - 48104681
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| |||||||||    
T  48104766 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

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Target: chr1; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 47498387 - 47498298
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaa 107  Q
    ||||||| ||||||||||| | ||||||||||||||| || ||||| |||||||| |||||||||||||| ||| |||||||||||||||    
T  47498387 actatagagggcaaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggggaaagtgcaattaagccaaa 47498298  T

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Target: chr1; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 50429744 - 50429656
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||  ||||||||| | ||||||||||    
T  50429744 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcc 50429656  T

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Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 999199 - 999115
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||  ||||||||| |||||||| |||||||||    
T  999199 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 999115  T

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Target: chr1; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 6703548 - 6703460
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaa-tgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| | |||||||||| ||||||| ||||||||||||    
T  6703548 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagcc 6703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 21687113 - 21687022
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||  |||||||  |||||||||  |||||||| |||||||||||||||    
T  21687113 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagccaaa 21687022  T

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Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 49317839 - 49317751
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcca 105  Q
    ||||||||||| ||||||| ||||||||||||||||| || ||||| |||||||| |||||||||| |||||||| |||||||||||||    
T  49317839 actatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcca 49317751  T

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Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 6703860 - 6703950
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaa 106  Q
    |||||| | |||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||||||  ||||| ||||||||||||||    
T  6703860 actatatgaggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagccaa 6703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 26815087 - 26815173
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||   ||||||||  |||||||| ||||||||||||    
T  26815087 tatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 26815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 42611273 - 42611188
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    |||||||| |||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||  |||||||| |||||||||    
T  42611273 actataggaggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

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Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 44911403 - 44911488
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||| |||| || ||||| |||||||||||||| ||||||||||||||  ||||||||||||||    
T  44911403 actatagggggcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaa 44911488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 49318409 - 49318499
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||  ||||||| ||||||||||||||||| || ||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  49318409 actataggggataaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagccaaa 49318499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 4692399 - 4692487
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    |||||||| || ||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||  |||| ||||||||||||    
T  4692399 actataggaggtaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4692487  T

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Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 42611580 - 42611670
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||  ||||||||||||  ||||| ||||||||| ||||    
T  42611580 actatagggggcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaaaccaa 42611670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 44911113 - 44911044
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||||||||||| |||||| |||| |||||||| |||||||||||||| ||||| ||||||||    
T  44911113 actatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggg 44911044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 4692109 - 4692022
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggga-aaaatgcaattaagcc 104  Q
    ||||||||||||||||| | |||||| ||||||| || || ||||||| |||||||||||||||||| ||| ||| ||||||||||||    
T  4692109 actatagggggcaaaatggctcgttttaaactataggatgcaaaatcgtacaattagcaaactatagaggagaaagtgcaattaagcc 4692022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 19008718 - 19008804
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||| |  ||||| ||||||||||||| ||||||||||||||   ||||||||  |||||||| ||||||||||||    
T  19008718 tatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcc 19008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 27172514 - 27172595
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||| ||||||||||| ||||| || |||||||||||||| ||||| || |  |||||||| ||||||||||||    
T  27172514 ggggcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcc 27172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 50949531 - 50949600
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||||||||||| |||||| |||| ||| | || ||||||||||||||  |||||||||||||    
T  50949531 actatagggggcaaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggg 50949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 44224085 - 44224169
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    |||||||||| |||||||| ||||||||||||||||| || |||||| ||||||| | |||||| | |||| ||| |||||||||    
T  44224085 actataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatggggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 21687445 - 21687520
Alignment:
Q  30 aaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||| ||||||||||||||| |||  |||||||||||||| ||||| |||| |||||||| ||| ||||||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 32162797 - 32162750
Alignment:
Q  38 tcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg 85  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  32162797 tcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagg 32162750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 49284487 - 49284409
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  49284487 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 49284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 6002315 - 6002234
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||| |||||||  ||||  |||||||  |||| |||||||||||||||    
T  6002315 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagccaaa 6002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 39691969 - 39692054
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||   |||||||||  |||||||| ||||||||||||||  |||| ||||  |||||||| ||||||||||||    
T  39691969 atagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcc 39692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 13589659 - 13589712
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  ||| |||||||| ||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 13589712  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 19007796 - 19007735
Alignment:
Q  44 aaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||||| ||| | |||||||||||||| |||||||||| |||| ||| ||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 19007735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 6002870 - 6002914
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaatt 72  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||||    
T  6002870 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 6002914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 48190827 - 48190768
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    |||||||| |||||||||||||| |||||  ||||||  ||||| |||||||||||||||    
T  48190827 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 48190768  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 50949237 - 50949158
Alignment:
Q  30 aaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagccaaa 107  Q
    ||||||| |||||| |||| ||| |||| |||||||||||||| ||| |||||||  ||||||| | ||||||| |||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaaaccaaa 50949158  T

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Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 3204755 - 3204667
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  3204755 actatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaagtgcaattaagccaa 3204667  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 37888921 - 37888830
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  37888921 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 37888830  T

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Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 13741645 - 13741555
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  13741645 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagccaa 13741555  T

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Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 9035259 - 9035348
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||    
T  9035259 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcca 9035348  T

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Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 10533122 - 10533034
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  10533122 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 10533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 37889225 - 37889313
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  37889225 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 37972362 - 37972450
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  37972362 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37972450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13744199 - 13744286
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  13744199 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 20418976 - 20418891
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||    
T  20418976 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 20419290 - 20419378
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  20419290 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 20419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 22740244 - 22740156
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  22740244 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 22740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 37972048 - 37971960
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||  ||||| ||||||||||||    
T  37972048 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcc 37971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 38826879 - 38826967
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||  |||||||||  |||||||||||||||||||||    
T  38826879 actatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 38826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 29293312 - 29293403
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||| |||| |||| ||| |||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  29293312 actatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagccaaa 29293403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 48359407 - 48359319
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcca 105  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||||||    
T  48359407 actatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcca 48359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 36527764 - 36527854
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||| |||| ||||||||||   ||||||||||||||||||||||    
T  36527764 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaagccaa 36527854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 18864055 - 18863970
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| |||||||||    
T  18864055 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 3205059 - 3205147
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  3205059 actatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 3205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 17157055 - 17156967
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  17157055 actatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 17156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 22740557 - 22740641
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| |||||||| |||||||||    
T  22740557 actatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 18864368 - 18864455
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| || |||||||||||| |||| |||||||||||||| |||||||||| |||||||| | ||||||||||    
T  18864368 actatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagcc 18864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 48359624 - 48359707
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaatta 100  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||||||||||||| | ||||||||||||||||| ||||||||    
T  48359624 actatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactataggggaaaaagtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 29293010 - 29292922
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||| |||| ||||| || |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  29293010 actatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 29292922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 42418679 - 42418610
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||||||||||| |||||||||||||| || |  |||||||||||||||||||||||||||||    
T  42418679 actatagggggcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactatagggg 42418610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 42418994 - 42419079
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactat-ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||||||    
T  42418994 actatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 36527471 - 36527387
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaa 101  Q
    |||||| |||| ||||| | |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  36527471 actataaggggaaaaattgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 9034956 - 9034867
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactat-ggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||| |||||| | |||||||||||| ||||| ||||  |||||||| ||||||||||||    
T  9034956 actatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 9034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13863391 - 13863313
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    
T  13863391 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 13863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 44599567 - 44599486
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| |||||||||||||||    
T  44599567 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 44599486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 16198967 - 16199031
Alignment:
Q  42 ttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||| |||||||||||||| ||||||||||  ||| |||| ||||||||||||    
T  16198967 ttaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcc 16199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 18925320 - 18925373
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagc 103  Q
    |||||||| |||||||||||||||||||| ||||| |||||| |||||||||||    
T  18925320 atggggtgcaaaatcgcacaattagcaaaatatagaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 44600111 - 44600189
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  44600111 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 13772901 - 13772964
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaatattta 113  Q
    |||||| ||||||||||||||||||||  |||  |||||||| ||||||||||||||| |||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagccaaaaattta 13772964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 13863933 - 13864010
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| |||||||||| ||||||||| ||| |||||||||| |||||  ||||||  ||||| ||||||||||||    
T  13863933 gcaaaatcgctcgtttaaaaatatggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 27096093 - 27096044
Alignment:
Q  59 aaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||||| |||| |||| ||| |||||||||||||||    
T  27096093 aaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccaaa 27096044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 27182210 - 27182259
Alignment:
Q  59 aaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||||| |||| |||| ||| |||||||||||||||    
T  27182210 aaaatcgcacaattagcaaaatataggggggaaagtgcaattaagccaaa 27182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 169405 - 169496
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  169405 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagccaaa 169496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 23539925 - 23539841
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||| ||||||||||||    
T  23539925 tatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaagtgcaattaagcc 23539841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 32703616 - 32703707
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  32703616 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 32703707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 4239334 - 4239422
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaa 106  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  4239334 tatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagccaa 4239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 28196739 - 28196827
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  28196739 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 28196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 25161966 - 25161879
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagc 103  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||    
T  25161966 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 43292125 - 43292038
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa--tgcaattaagc 103  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||||||||||    
T  43292125 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 43292323 - 43292413
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  43292323 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagccaa 43292413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 9023332 - 9023244
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||  |||||||||||||||||||| |||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  9023332 actatagggggcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 9380395 - 9380307
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  9380395 actatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 9380707 - 9380795
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  9380707 actatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 26207712 - 26207800
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||| |||| |||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||    
T  26207712 actatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 26207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 28196434 - 28196346
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||  |||||||| ||||||||||||    
T  28196434 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 28196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 39744431 - 39744519
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  39744431 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 39744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 169102 - 169013
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg---gaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||   ||||| ||||||||||||    
T  169102 actatagggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcc 169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 39744118 - 39744020
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaaatatttat 114  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| | ||||||||||||  |||| |||||||||||| ||| |||||    
T  39744118 actatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcctaatttttat 39744020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 44468889 - 44468975
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||| |||   ||||||||||    
T  44468889 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggggaaatgacaattaagcc 44468975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 293183 - 293271
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    |||||| |||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  293183 actatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 9023646 - 9023734
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  9023646 actatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 9023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 48406047 - 48405962
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||| |||| |||||||||| |||||||| ||||||||||||    
T  48406047 tatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcc 48405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 26207448 - 26207361
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||| |||| |||||||| |||||||||||||| |||||||||| |||| ||| ||||||||||||    
T  26207448 actatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 26207361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 23540218 - 23540307
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcca 105  Q
    ||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||  ||||||||||||  ||||| |||||||||||||    
T  23540218 actatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcca 23540307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 39086589 - 39086678
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcca 105  Q
    ||||||||||||||||||| ||||||||||||||  |||| |||||||||||||| ||||||||||  || ||||| |||||||||||||    
T  39086589 actatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcca 39086678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 32703313 - 32703225
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||| |||||| | |||||||||||| ||||| ||||  |||||||| ||||||||||||    
T  32703313 actatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 48406351 - 48406420
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||| ||||||||    
T  48406351 actatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattatagggg 48406420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 39912134 - 39912054
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||  ||||||||||  |||||| ||||||||||||    
T  39912134 ggggcaaaatcgttcgtttaaaactat-ggatgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcc 39912054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 292866 - 292782
Alignment:
Q  22 tagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||| ||||||||||||||| | || ||||| |||||||| ||||||||||  |||||||| ||||||||||||    
T  292866 tagggggcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 25162279 - 25162365
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||  |||| |||||||| ||| |  |||||||||    
T  25162279 actatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagggggaaagtataattaagcc 25162365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 36095902 - 36095817
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    |||||| ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    
T  36095902 atagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 36095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 12757854 - 12757788
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag 84  Q
    |||||||||| |||||||| ||||||||||||||| | || ||||||||||||||  ||||||||||    
T  12757854 actataggggacaaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatag 12757788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 39912453 - 39912543
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag-gggaaaaatgcaattaagccaaa 107  Q
    |||||||| |||||||||  ||||||||||||||||| || ||||||||||||||   |||||||||  |||||| || ||||||||||||    
T  39912453 actataggtggcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagaaggaaaagtgtaattaagccaaa 39912543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 12758170 - 12758254
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaa 101  Q
    ||||||||||||||||| | |||||||||||||||| ||| |||| | || |||| ||||||||||||  ||||| |||||||||    
T  12758170 actatagggggcaaaattgctcgtttaaaactatggcgtgcaaaaacacataattggcaaactataggaaaaaaagtgcaattaa 12758254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 43051228 - 43051306
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||| ||||||| |||||  |||||||  |||||||||||||||||    
T  43051228 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcc 43051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 50678857 - 50678779
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  50678857 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 50678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 36096451 - 36096532
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||| |||||    
T  36096451 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaa 36096532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 50679400 - 50679480
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaa 106  Q
    ||||||||| ||||||||||  |||||||| ||||||| |||||| |||||  |||||||  |||| ||||||||||||||    
T  50679400 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagccaa 50679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 16555815 - 16555873
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    |||||||| ||||||||||||||||||||  |||  |||||||| ||||||||||||||    
T  16555815 atggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagccaa 16555873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 27304770 - 27304716
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaa 106  Q
    |||||| |||||||||||||||||| |  |||||||||||  |||||||||||||    
T  27304770 ggggtgcaaaatcgcacaattagcagaagataggggaaaagggcaattaagccaa 27304716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 3930480 - 3930533
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  ||| |||||||| ||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 3930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 56505757 - 56505693
Alignment:
Q  42 ttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||| |||||||||||||| |||||  |||  |||||||| ||||||||||||    
T  56505757 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 45830172 - 45830216
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaatt 72  Q
    ||||||||| || |||||||  |||||||||||||||||||||||    
T  45830172 gcaaaatcgctcttttaaaaacatggggtgtaaaatcgcacaatt 45830216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 19708 - 19621
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||    
T  19708 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcc 19621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 20009 - 20097
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||||  |||||||||||||||| | ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  20009 actatagggggcaaaatcgtcagtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcc 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 185240 - 185330
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||  |||||| ||||||||||||||    
T  185240 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagccaa 185330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 184927 - 184840
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagc 103  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||| ||||| ||  ||||||||  ||| ||||| |||||||||||    
T  184927 actataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 38661 - 38749
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  38661 actatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 38339 - 38285
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaatt 72  Q
    ||||||||||||||||||| || |||||||||||||| || ||||||||||||||    
T  38339 actatagggggcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaatt 38285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 12498655 - 12498567
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  12498655 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 26571130 - 26571218
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  26571130 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 26571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 21207314 - 21207215
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaatatttata 115  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||| ||| |||| ||||    
T  21207314 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccatatatatata 21207215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 43463843 - 43463759
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat-aggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| |||||||||    
T  43463843 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 37780407 - 37780320
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||| |||||||| ||||||||||||    
T  37780407 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcc 37780320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 12498894 - 12498991
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaatattta 113  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||| ||| ||||    
T  12498894 actatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaattttta 12498991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 22729406 - 22729492
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagc 103  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||| |||||||| |||||||||||    
T  22729406 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 19514614 - 19514545
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19514614 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggg 19514545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 25940609 - 25940521
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggga--aaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||  ||||||||||||||  ||||||||||||||||    
T  25940609 actatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcc 25940521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 3888327 - 3888237
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||  |||||||  ||||||||||||||    
T  3888327 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagccaa 3888237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 37610289 - 37610202
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||| |||||||| ||||||||||||    
T  37610289 actataaggggcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcc 37610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 43464158 - 43464245
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  43464158 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 43464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 34147227 - 34147141
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||   |||||||| ||||||| ||||||||||||    
T  34147227 actatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactataagggaaaagtgcaattaagcc 34147141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 37610584 - 37610674
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  37610584 actatagggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagccaaa 37610674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 2817543 - 2817631
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||||||| |||||||| |||||||||| ||||    
T  2817543 tatagggagcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagggggaaaagtgcaattaagtcaaa 2817631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 25940980 - 25941067
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagc 103  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||| ||||||||||  ||||||| |||||||||||    
T  25940980 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 26570817 - 26570724
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaata 109  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| || ||||||||| ||||    
T  26570817 actataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcctaata 26570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 19514929 - 19515017
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  19514929 actatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 19515017  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 34147476 - 34147564
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||||||||||||||  |||||||||||||  |||| ||||||||||||    
T  34147476 actatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 34147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 37780715 - 37780799
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||||  |||||||| | |||||||||||||    
T  37780715 ggggcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagccaaa 37780799  T

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Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 2817235 - 2817152
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaa 101  Q
    ||||||||||||||||| |||||||||| |||||| || |||||||||||||| ||||||||||||  |||||| |||||||||    
T  2817235 tatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10098907 - 10098991
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaa 101  Q
    ||||||||||  ||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||| |||||| |||||||||    
T  10098907 actataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaa 10098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 3888628 - 3888713
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||| ||||   ||||||| |||||||||    
T  3888628 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 22729088 - 22729006
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaa 106  Q
    |||||||||||| |||||||||||||||  ||| ||||||||||||||  ||||||||| |||||||| ||||||||||||||    
T  22729088 ggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagccaa 22729006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 10098602 - 10098517
Alignment:
Q  23 agggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaa-tgcaattaagccaa 106  Q
    |||||||||||||| |||||||||||||| || || ||||||||||||||  ||||||||||| ||||||| ||||||||||||||    
T  10098602 agggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagccaa 10098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 41072180 - 41072264
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||  ||||||||||| |||||| || ||||||    
T  41072180 actatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactataggaggaaaagtgtaattaa 41072264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 11316940 - 11317014
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa 92  Q
    ||||||||||||||||||| || |||||||| |||||||| |||||||||||||| ||||| || || |||||||    
T  11316940 actatagggggcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaa 11317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 18817030 - 18816940
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc--aaatatttat 114  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||||||||||||||||  ||||||||||    
T  18817030 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcctaaaatatttat 18816940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 30401968 - 30401879
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||| | ||||||||||||||| || ||||| | |||||| |||||||||  || |||||| ||||||||| |||||    
T  30401968 tatagggggcaaaatcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaaaccaaa 30401879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 18817587 - 18817667
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaa 106  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||||    
T  18817587 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaa 18817667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 22429194 - 22429258
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaatattta 113  Q
    |||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||| || |||||    
T  22429194 atggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcctaagattta 22429258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 42919389 - 42919305
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagcc 104  Q
    |||||| ||||||||| ||||||||||  ||| |||| |||||||||||||| | ||| |||||||||||||  |||||||||||    
T  42919389 atagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatataggggaaaaagagcaattaagcc 42919305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 11350885 - 11350808
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    ||||||||| |||||||||| ||||||||| ||||| |||||||| |||||  |||||||  |||||||||||||||||    
T  11350885 gcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcc 11350808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 12441320 - 12441367
Alignment:
Q  60 aaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  12441320 aaatcgcacaattagcaaaagataggggaaaagtgcaattaagccaaa 12441367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 23011131 - 23011076
Alignment:
Q  53 gggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagccaaa 23011076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 11316802 - 11316717
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaa 101  Q
    ||||||||||||||||| | |||||||||| ||| || || ||||| | |||||| |||||||||||  ||||||| |||||||||    
T  11316802 actatagggggcaaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 11351405 - 11351453
Alignment:
Q  30 aaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaa 78  Q
    ||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaa 11351453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 34577162 - 34577218
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagcca 105  Q
    |||||||| |||||| |||||||||||||  |||||||||||| |||||||||||||    
T  34577162 atggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagcca 34577218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 9665611 - 9665560
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaa 101  Q
    |||||||| ||||| ||||||||||||||  ||||||||||| |||||||||    
T  9665611 atggggtgcaaaattgcacaattagcaaaagataggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 18433071 - 18433013
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    |||||||| ||||||||||||||||||||  |||  |||||||| ||||||||||||||    
T  18433071 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaa 18433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 26020506 - 26020450
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagcc 104  Q
    |||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||||    
T  26020506 atggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 34576922 - 34576885
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    |||||||||||||||||||||||||||||  |||||||    
T  34576922 atggggtgtaaaatcgcacaattagcaaaagatagggg 34576885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 16466749 - 16466796
Alignment:
Q  59 aaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||||| ||||  |||||||| ||||||||||||    
T  16466749 aaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 26692786 - 26692878
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaagccaaat 108  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||  ||||||||| ||||||||| ||||||    
T  26692786 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaaccaaat 26692878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 7664639 - 7664730
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||  |||||| |||||||||||||||    
T  7664639 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagccaaa 7664730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 7979969 - 7980056
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagcc 104  Q
    |||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7979969 actataggcggcgaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcc 7980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 7979653 - 7979567
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| ||||||| |||||| |||||    
T  7979653 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactataagggaaaagtgcaataaagcc 7979567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 8851236 - 8851151
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||    
T  8851236 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 19141815 - 19141905
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaat 108  Q
    ||||||||||||||||||| |||||| |||||||||| || |||||||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  19141815 actatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatagggggaaagtgcaattaaaccaaat 19141905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 8851548 - 8851636
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  8851548 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 8851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 17851368 - 17851433
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata 83  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17851368 actatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata 17851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 17851064 - 17850975
Alignment:
Q  19 ctatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  17851064 ctatagggggcaaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 17850975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 16910915 - 16910826
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaact--ataggggaaaaatgcaattaagcca 105  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||  || |||||||| |||||||||||||    
T  16910915 actatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcca 16910826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 16911235 - 16911321
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg-aaaaatgcaattaagc 103  Q
    |||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||  ||| |||||||||||    
T  16911235 actataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagc 16911321  T

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Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 37720285 - 37720204
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  37720285 ggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 41790578 - 41790494
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||  ||||||||| ||||||||||||||||||    
T  41790578 actatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 6325313 - 6325399
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaag 102  Q
    ||||||||||||||||||| |||||||| |||||| |||| |||||||||||||| ||||||||||  |||||||| ||||||||||    
T  6325313 actatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

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Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 7664334 - 7664248
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||   ||||||||  |||||||| ||||||||||||    
T  7664334 tatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 7664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 6325005 - 6324936
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    |||||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||    
T  6325005 actataggggacaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggg 6324936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 18750097 - 18750178
Alignment:
Q  23 agggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagc 103  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||  ||||||||| ||||| || |||||||||||    
T  18750097 agggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

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Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 5378747 - 5378661
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||  ||||| |||||| |||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  5378747 tatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 5378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 26692482 - 26692399
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag-gggaaaaa-tgcaattaa 101  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||| |||||||| |||||||||    
T  26692482 tatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 5793535 - 5793450
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaa 101  Q
    ||||||||||||||||||| |||||||||||||| || || |||||||||||||| |||||||| |  |||||||| |||||||||    
T  5793535 actatagggggcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 41790878 - 41790966
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||| |||| |||||| | |||||||||||||| ||||| ||||  |||||||| ||||||||||||    
T  41790878 actatagggggcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 18749813 - 18749717
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaagccaaatattta 113  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| || ||||  ||||||| ||| | |||| ||||||||| |||| ||||||    
T  18749813 actatagggggcaaaatcattcgtttaaaactatggggtgcaaaatcacataattgacaaactagaggagtaaaagtgcaattaaaccaattattta 18749717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 2638898 - 2638820
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    
T  2638898 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 2638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 5379927 - 5380013
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||  ||||| |||||| |||||| |||||||||||||| | ||||||||  |||||||| ||||||||||||    
T  5379927 tatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcc 5380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 19141531 - 19141446
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaag 102  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||  |||| ||||||||||    
T  19141531 actatagggggtaaattcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 2639458 - 2639536
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  2639458 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 2639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 26841665 - 26841587
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  26841665 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 26841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 26842214 - 26842295
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| |||| ||||||||||    
T  26842214 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagccaaa 26842295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 38490817 - 38490895
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg-gaaaaatgcaattaagcca 105  Q
    ||||||||| ||||||||||| ||| | || |||||||||||||| | ||||||||||| | ||| |||||||||||||    
T  38490817 gcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggaggaaagtgcaattaagcca 38490895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 26737534 - 26737482
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  ||||| ||||| ||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagataggagaaaagtgcaattaagcc 26737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7591279 - 7591220
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  |||||||    
T  7591279 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagggg 7591220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 18296154 - 18296095
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg 87  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  |||||||    
T  18296154 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagatagggg 18296095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 7591826 - 7591907
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||||  ||||  ||||  | |||| ||||||||||||||||    
T  7591826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagccaaa 7591907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 11883926 - 11883983
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||| ||||||||||||||||||||  |||  |||||||| |||||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaa 11883983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 40469481 - 40469424
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagccaaa 107  Q
    |||||| ||||||||||||||||||||  ||||  ||||||||| |||||||||||||    
T  40469481 ggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagccaaa 40469424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 24832387 - 24832331
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    |||||||| ||||||||||||||||||||  |||  |||||||| ||||||||||||    
T  24832387 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 24832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 43495612 - 43495661
Alignment:
Q  59 aaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||||| |||||| || ||| |||||||||||||||    
T  43495612 aaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagccaaa 43495661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 43495356 - 43495309
Alignment:
Q  59 aaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagcc 104  Q
    |||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcc 43495309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 37396796 - 37396697
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaatatttata 115  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||  ||||||||||  |||||||| |||||||||||| ||| ||||||    
T  37396796 actatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcctaatttttata 37396697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 6199062 - 6199159
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaatattta 113  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||||||  ||||| |||||||||||| ||| ||||    
T  6199062 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagcctaattttta 6199159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 9623590 - 9623497
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatag-gggaaaaa-tgcaattaagccaaata 109  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||||| | |||||| |||||||||||||||||    
T  9623590 actatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagccaaata 9623497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 24473734 - 24473822
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    |||||||||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||  ||||| ||||||||||||    
T  24473734 actataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcc 24473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 41662609 - 41662521
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  41662609 actatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcc 41662521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 25439092 - 25439176
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaa 101  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  25439092 actatagagggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 20861606 - 20861692
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    |||||| |||||||||| |||||||||||||||||||| |||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  20861606 tataggaggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcc 20861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 37397112 - 37397202
Alignment:
Q  19 ctatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||| ||| |||||||||||||||||| | |||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  37397112 ctatagggggcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccaaa 37397202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 34498210 - 34498113
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaaatattta 113  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||||||  |||| ||||||||| |||| ||||||    
T  34498210 actatagggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaaccaattattta 34498113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 17431375 - 17431287
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  17431375 actatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcc 17431287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 24473431 - 24473340
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| || ||||||| ||||||||| |||||| ||||||| ||||||||||||||  |||| |||||||||||||||    
T  24473431 actatagggggcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagccaaa 24473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 33727071 - 33727136
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata 83  Q
    ||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  33727071 actatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactata 33727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 15444299 - 15444213
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactat--aggggaaaaatgcaattaag 102  Q
    ||||||||| ||||||||| ||||||||||||||||  |||||||| | |||||| |||||||||  ||||||||||||||||||||    
T  15444299 actatagggagcaaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 34498523 - 34498609
Alignment:
Q  20 tatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||| ||||  | |||||||||||||||||| |||||||||||||| ||||||||||  |||||||| ||||||||||||    
T  34498523 tatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcc 34498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 16169261 - 16169171
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg-ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||| ||||| | ||||||||||||||| |||| ||||| |||||||| ||||||||||||  ||||| |||||||||||||||    
T  16169261 actatagggggaaaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagccaaa 16169171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6198746 - 6198692
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaatt 72  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  6198746 actatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaatt 6198692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 15444613 - 15444687
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa 92  Q
    ||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| | ||| |||||||| ||||    
T  15444613 actataggggataaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaa 15444687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 2856614 - 2856526
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagcc 104  Q
    ||||||||||  |||||||  ||||| ||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  2856614 actataggggataaaatcgaacgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagcc 2856526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 25438856 - 25438789
Alignment:
Q  42 ttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||| |||||||||||||| ||||||||||  |||||||| |||||||||| ||||    
T  25438856 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagtcaaa 25438789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 39724024 - 39724105
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| |||||||||||||||    
T  39724024 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaa 39724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13936800 - 13936723
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcc 104  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| | |||  ||| |||||||| ||||||||||||    
T  13936800 gcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcc 13936723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6092853 - 6092777
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    ||||||||||||  |||||| |||||| || ||||||||||||||  ||||  ||||||| ||||||||||||||||    
T  6092853 gcaaaatcgttcaattaaaaatatgggatgcaaaatcgcacaattgacaaaagatagggggaaaatgcaattaagcc 6092777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 13027257 - 13027344
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaatattta 113  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||| ||||| |||||    
T  13027257 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaaccaaaaattta 13027344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 16169573 - 16169664
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagg--ggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||||| ||||||||||||||  | || ||| | ||||||||   ||||||||||  |||||| |||||||||||||||    
T  16169573 actatagggggcaaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagccaaa 16169664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 9823337 - 9823415
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  9823337 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 9823415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 34313817 - 34313762
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaa 107  Q
    |||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  34313817 ggggtgcaaaatcgcacaattaacaaaagataggggaaaagtgcaattaagccaaa 34313762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 3307416 - 3307335
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| | |||||||| |||||| || ||||||||||||||  ||||  ||||||  |||||||||||||||||||||    
T  3307416 gcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagccaaa 3307335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 43162285 - 43162224
Alignment:
Q  54 ggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagccaaatatttat 114  Q
    |||| ||||||||||||||| |||| |||||||| |||| ||||||||||||||||| ||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagccaaatagttat 43162224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 15442848 - 15442765
Alignment:
Q  21 atagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaag 102  Q
    |||||| |||||||||  |||||||||  |||||||| |||||| ||||||| || || ||||||||  |||||||||||||||    
T  15442848 atagggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 16929242 - 16929305
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaatattta 113  Q
    |||||| ||||||||||||||||||||  ||||||  ||||| |||||||||||||| ||||||    
T  16929242 ggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagccaattattta 16929305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 13026713 - 13026635
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  ||| |||| |||||||||||||| |||||  ||||||  ||||| ||||||||||||    
T  13026713 gcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 37752140 - 37752082
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    |||||||| ||||||||||||||||||||  |||  |||||||| ||||||||||||||    
T  37752140 atggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagccaa 37752082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 9822826 - 9822745
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| ||||||||||  |||||||| ||||||||||||||   |||  ||||||  ||||| |||||||||||||||    
T  9822826 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagccaaa 9822745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 22851468 - 22851387
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagccaaa 107  Q
    ||||||||| | ||||||||  |||||||| ||||||||||||||  ||||  ||||||  ||||| |||||||||||||||    
T  22851468 gcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagccaaa 22851387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 9465874 - 9465923
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaa 101  Q
    |||||| ||||||||||||||| ||||  |||||| ||||||||||||||    
T  9465874 ggggtgcaaaatcgcacaattaacaaaagatagggaaaaaatgcaattaa 9465923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 3463946 - 3464001
Alignment:
Q  53 gggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaa 106  Q
    ||||| || ||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagccaa 3464001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 18020088 - 18020140
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||| ||||  |||||| |||| ||||||||||||    
T  18020088 ggggtgcaaaatcgcacaattaacaaaagatagggtaaaagtgcaattaagcc 18020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 23123394 - 23123335
Alignment:
Q  50 atggggtgtaaaatcgcacaattagcaaactatag--gggaaaaatgcaattaagccaaa 107  Q
    |||||||||||||||||||||||  ||||  ||||  ||||||| |||||||||||||||    
T  23123394 atggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagccaaa 23123335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 43597845 - 43597790
Alignment:
Q  59 aaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaatatttata 115  Q
    ||||||||||||||||||||| |||||  |||| ||||||||| || ||||||||||    
T  43597845 aaaatcgcacaattagcaaacgataggaaaaaagtgcaattaa-cctaatatttata 43597790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 736 - 819
Alignment:
Q  25 ggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagccaaa 107  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  736 ggggcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagccaaa 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 418 - 330
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||  |||||||||  |||||||| ||||||||||||    
T  418 actatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 50472 - 50563
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactat-ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagccaaa 107  Q
    ||||||||||||||||| | |||||||||||||| |||||| |||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  50472 actatagggggcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagccaaa 50563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 50161 - 50075
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagcc 104  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||  ||||||||||||| ||| ||||||||||||    
T  50161 actacagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatagggggaaagtgcaattaagcc 50075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 9994 - 9905
Alignment:
Q  18 actatagggggcaaaatcgttcgtttaaaactat-ggggtgtaaaatcgcacaattagcaaactatagggg--aaaaatgcaattaagcc 104  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| ||||||||||||||  |||| ||||||||||||    
T  9994 actatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 9905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 10311 - 10378
Alignment:
Q  44 aaaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaaatatt 111  Q
    |||||||| ||||| ||||||| |||||| |||||||||||||||||| ||| |||||||| ||||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaactataggggaaaagtgctattaagcctaatatt 10378  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 6230 - 6150
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaa--ctataggggaaaaatgcaattaagccaa 106  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||   || ||| ||||| ||||||||||||||    
T  6230 gcaaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagccaa 6150  T

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Target: scaffold0328; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 6771 - 6849
Alignment:
Q  28 gcaaaatcgttcgtttaaaactatggggtgtaaaatcgcacaattagcaaactataggg--gaaaaatgcaattaagcc 104  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| |||||  ||||||  ||||||||||||||||||    
T  6771 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 16905 - 16851
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaagccaa 106  Q
    |||||| | ||||||||||||||||||  |||||||||||| |||||||||||||    
T  16905 ggggtgcataatcgcacaattagcaaaagataggggaaaaaggcaattaagccaa 16851  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 205740 - 205687
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggg-gaaaaatgcaattaagcc 104  Q
    |||||| ||||||||||||||||||||  |||||| ||||||||||||||||||    
T  205740 ggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagcc 205687  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 205861 - 205909
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactataggggaaaaatgcaattaa 101  Q
    |||||| ||||| |||||||||||||| |||| |||||||||||||||||    
T  205861 ggggtgcaaaattgcacaattagcaaaatata-gggaaaaatgcaattaa 205909  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 7515 - 7455
Alignment:
Q  45 aaactatggggtgtaaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagcc 104  Q
    |||| |||||||| ||||||||| ||||||||||  |||||||||||| ||||||||||||    
T  7515 aaacgatggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcc 7455  T

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Target: scaffold0376; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 7607 - 7659
Alignment:
Q  59 aaaatcgcacaattagcaaactataggggaaaaa-tgcaattaagccaaatat 110  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||| ||||    
T  7607 aaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagccatatat 7659  T

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Target: scaffold0319 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 6697 - 6751
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata-ggggaaaaatgcaattaagcca 105  Q
    |||||| ||||||||||||||||||||  ||| |||||||| |||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcca 6751  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 438984 - 438927
Alignment:
Q  52 ggggtgtaaaatcgcacaattagcaaactata--ggggaaaaatgcaattaagccaaa 107  Q
    |||||| ||||||||||||||||||||  |||  |||||||| |||||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaa 438927  T

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