View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15341_low_9 (Length: 387)

Name: NF15341_low_9
Description: NF15341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15341_low_9
NF15341_low_9
[»] chr4 (3 HSPs)
chr4 (16-377)||(28391159-28391536)
chr4 (45-136)||(1543115-1543206)
chr4 (57-140)||(16940836-16940919)
[»] chr8 (3 HSPs)
chr8 (16-377)||(32526763-32527140)
chr8 (56-139)||(43443336-43443419)
chr8 (18-136)||(18012979-18013097)
[»] chr1 (5 HSPs)
chr1 (16-377)||(6837439-6837816)
chr1 (19-365)||(8976003-8976360)
chr1 (18-372)||(6385838-6386208)
chr1 (45-136)||(26402748-26402839)
chr1 (306-362)||(28599553-28599609)
[»] chr5 (3 HSPs)
chr5 (28-293)||(20081993-20082252)
chr5 (45-136)||(17795237-17795328)
chr5 (105-154)||(20332439-20332488)
[»] chr2 (1 HSPs)
chr2 (170-357)||(13812830-13813012)
[»] chr3 (1 HSPs)
chr3 (24-209)||(2803712-2803900)
[»] chr6 (2 HSPs)
chr6 (45-136)||(7035819-7035910)
chr6 (18-139)||(26255801-26255922)
[»] chr7 (5 HSPs)
chr7 (18-139)||(35968006-35968127)
chr7 (18-139)||(35989418-35989539)
chr7 (18-139)||(43584652-43584773)
chr7 (18-139)||(8987767-8987888)
chr7 (105-154)||(35940954-35941003)


Alignment Details
Target: chr4 (Bit Score: 281; Significance: 1e-157; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 16 - 377
Target Start/End: Complemental strand, 28391536 - 28391159
Alignment:
Q  16 cagtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaac 115  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  28391536 cagtgtttgccgattccgctcaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatttgtttcttctttcactaac 28391437  T
Q  116 tccattttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattg 215  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  28391436 tccattttgttgtgaagtgtatggaacagtcaattgatgatgaatgccaacgtcatcacataatcgatcaaatgcttcagaagtatactctttgccattg 28391337  T
Q  216 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttgtgcta----------------cagaaaga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||                ||||||||    
T  28391336 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccgaaatacttgtgctacctctgacttgtgcttcagaaaga 28391237  T
Q  300 aaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctctgtg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28391236 aaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtg 28391159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 1543206 - 1543115
Alignment:
Q  45 tttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgta 136  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||| |||  |||| ||| |||||||||||||||||||||| |||||||||||    
T  1543206 tttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactccattttgctgtggagtgta 1543115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 16940919 - 16940836
Alignment:
Q  57 ttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgtatgga 140  Q
    |||||||| |||||| |||  | |||||||| || | |||| ||| | ||||||||||||||||||||||||||||| ||||||    
T  16940919 ttctcatgtagcatatatctagccatctccattacatatctatttctcctttcactaactccattttgttgtggagtatatgga 16940836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 277; Significance: 1e-155; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 16 - 377
Target Start/End: Complemental strand, 32527140 - 32526763
Alignment:
Q  16 cagtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaac 115  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  32527140 cagtgtttgccgattccgctcaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataattttgtttcttctttcactaac 32527041  T
Q  116 tccattttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattg 215  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  32527040 tccattttgttgtgtagtgtatggaacagtcaattgatgatgaatgccatcgtcatcacataatcgatcaaatgcttcagaagtatactctttgccattg 32526941  T
Q  216 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttgtgcta----------------cagaaaga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||                ||||||||    
T  32526940 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttcctaaatacttgtgctacctctgacttgtgcttcagaaaga 32526841  T
Q  300 aaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctctgtg 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32526840 aaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctttgtg 32526763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 43443419 - 43443336
Alignment:
Q  56 cttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgtatgg 139  Q
    ||||||||||| ||||||||  | |||||||| || | |||| ||| | |||||||||||||||||||||||||| || |||||    
T  43443419 cttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactccattttgttgtggcgtatatgg 43443336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 18013097 - 18012979
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  |||||||||| || ||||| | |||||||||||  |||||||  | |||||||| ||   |||| ||| | |||||||||||||    
T  18013097 gtgtttgccgcttctgcccaaaattgtttaggcaattccttctcatgcaaaatacatctagccatctccattactgatctatttctcctttcactaactc 18012998  T
Q  118 cattttgttgtggagtgta 136  Q
    |||||||||  ||||||||    
T  18012997 cattttgttcgggagtgta 18012979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 265; Significance: 1e-148; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 16 - 377
Target Start/End: Original strand, 6837439 - 6837816
Alignment:
Q  16 cagtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaac 115  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6837439 cagtgtttgtcgattccgcccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatccgtttcttctttcactaac 6837538  T
Q  116 tccattttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattg 215  Q
    || ||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  6837539 tcaattttgttgtggagtgtatggaacaatcaattgatgattaatgccagcgtcatcacagaatcgatcaaatgcttcagaagtatactctttgtcattg 6837638  T
Q  216 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaat----------------acttgtgctacagaaaga 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||||||| ||||||||    
T  6837639 tctgatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttgtgccacctctgacttgtgcttcagaaaga 6837738  T
Q  300 aaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttctctgtg 377  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  6837739 aaatccaacacatacaggtaaaatcatcaatgaatatagcataataaagactgtcattcaaagaagatgttctttgtg 6837816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 19 - 365
Target Start/End: Original strand, 8976003 - 8976360
Alignment:
Q  19 tgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactcc 118  Q
    ||||||| |||||| ||||||| || ||  |||||||||||||||||| |||||||||| |||||| |||||||||| ||||| |||||||||||||||     
T  8976003 tgtttgctgattccgcccaaaactggttgagcaagttcttctcatgcaacatacatcgg-tcatcttcaatataaatatgtttcttctttcactaactcg 8976101  T
Q  119 attttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattgtct 218  Q
    ||||| ||||||||||||||||| ||| || | |||||||||||||||||||| ||| ||||||||||||| |    ||| ||||||||| ||||||| |    
T  8976102 attttattgtggagtgtatggaatagttaactaatgatgaatgtcagcgtcattacataatcgatcaaatgct----aagcatactcttttccattgttt 8976197  T
Q  219 gatctgagagcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttg----------------tgctacagaaagaaaa 302  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||                |||| ||||||||| |    
T  8976198 gatatgagagcttgaattttacaaccactttcattctccactcttgctttgaagttccataatacttgtgttacctcttacttttgcttcagaaagaaga 8976297  T
Q  303 tccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaag 365  Q
    | ||||||||||| |||| ||||||||||| ||||||||||| |||||||||| |||| ||||    
T  8976298 tacaacacatacgagtaatatcatcaatgagtatagcataatgaagactaccaatcaatgaag 8976360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 372
Target Start/End: Complemental strand, 6386208 - 6385838
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    ||||| ||||||||  ||||||||| ||| | |||||||||  |||| | ||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  6386208 gtgttcgccgattctgcccaaaatttcttggtcaagttcttaccatgtaacatacattgggtcatctccaatataaatttgtttcttctttcactaactc 6386109  T
Q  118 cattttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattgtc 217  Q
     ||| ||||||||| ||||| |||| ||| | |||||||||||   | | |||||||| ||||||||||||| ||||||| |||||| |||||| || ||    
T  6386108 tattatgttgtggaatgtattgaaccgtccaatgatgatgaattctaacttcatcacaaaatcgatcaaatgcttcagaa-tatactatttgccgttatc 6386010  T
Q  218 tgatctgagagcttgaattttacaaccactttcattctccactcttg-ctttgaatttccaaaatacttgtgctac----------------agaaagaa 300  Q
     ||||| |||| |||||| |||||||||   |||||||||||||  |  |||||||| | ||||||||||||||||                ||||||||    
T  6386009 agatctaagagtttgaatgttacaaccatcctcattctccactccagattttgaattgctaaaatacttgtgctacctaaggattgtgctttagaaagaa 6385910  T
Q  301 aatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaagaagatgttct 372  Q
     |||||||||||||   |||||||||||||| ||||| |||||||| ||||| ||| |||||||| ||||||    
T  6385909 gatccaacacatacaactaaaatcatcaatgcatataacataataatgactatcatgcaaagaaggtgttct 6385838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 26402839 - 26402748
Alignment:
Q  45 tttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgta 136  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||| |||  |||| ||| |||||||||||||||||||||| |||||||||||    
T  26402839 tttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactccattttgctgtggagtgta 26402748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 28599553 - 28599609
Alignment:
Q  306 aacacatacgggtaaaatcatcaatgaatatagcataataaagactaccattcaaag 362  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||||  |||||||||    
T  28599553 aacacatacgagtaaaatcaacaatgaatatagtataataaagactgtcattcaaag 28599609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 6e-56; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 28 - 293
Target Start/End: Original strand, 20081993 - 20082252
Alignment:
Q  28 attccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttg 127  Q
    |||||||||| |||||| | ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||||  |  ||||||||     
T  20081993 attccacccacaattgcatgggcaagttcttctcatgcatcatacatcggttcatctccaatataaatctatttcttcttttactatttatattttgttc 20082092  T
Q  128 tggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttgccattgtctgatctgaga 227  Q
    |||| |||||||||||   | ||||| ||||||||||| ||||||||| |||||||| |||| ||||||||||| |||||| | ||||||||||  ||||    
T  20082093 tggattgtatggaacatatagttgataatgaatgtcagtgtcatcacataatcgatccaatgcttcagaagtattctcttttctattgtctgatacgaga 20082192  T
Q  228 gcttgaattttacaaccactttcattctccactcttgctttgaatttccaaaatacttgtgctaca 293  Q
    | |||| |||||||||||||||| ||||      || ||||||| |||||||||||||||||||||    
T  20082193 gtttgacttttacaaccactttctttct------tttctttgaagttccaaaatacttgtgctaca 20082252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 17795328 - 17795237
Alignment:
Q  45 tttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgta 136  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||| |||  |||| ||| ||||||||||||||||||||||||||||||||||    
T  17795328 tttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactccattttgttgtggagtgta 17795237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 20332439 - 20332488
Alignment:
Q  105 ctttcactaactccattttgttgtggagtgtatggaacagtcaattgatg 154  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  20332439 ctttcactcactccattttgttgaggagtgtaaggagcagtcaactgatg 20332488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 170 - 357
Target Start/End: Complemental strand, 13813012 - 13812830
Alignment:
Q  170 atcacagaatcgatcaaatgtttcagaagtatactctttgccattgtctgatctgagagcttgaattttacaaccactttcattctccactcttgctttg 269  Q
    ||||||||||||||| |||| || ||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||   | |||||||||| ||||||    
T  13813012 atcacagaatcgatcgaatgctttagaagtatacttttttccattgtctgatctaagagcttgaattttaaaaccactcctactctccactctagctttg 13812913  T
Q  270 aatttccaaaatacttgtgctacagaaagaaaatccaacacatacgggtaaaatcatcaatgaatatagcataataaagactaccatt 357  Q
    || ||||||||||||||||||  |||||| || ||||||||||||  ||||||||||||||||||||    |||||||||||||||||    
T  13812912 aagttccaaaatacttgtgctttagaaag-aattccaacacatactagtaaaatcatcaatgaatat----taataaagactaccatt 13812830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 2803900 - 2803712
Alignment:
Q  24 gccgattccacccaaaattgctttggcaagttcttctcatgcag----catacatcgggtcatctccaatataaatctgtttattctttcactaactcca 119  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||     ||||||||||||||| |||||||||||| ||| | |||||||||||||||||    
T  2803900 gccgattccgcccaaaattacttgggcaagttcttctcatgcatgcaacatacatcgggtcatatccaatataaatatgtctcttctttcactaactcca 2803801  T
Q  120 ttttgttgtggagtgtatggaacagtcaattgatgatgaatgtcagcgtcatcacagaatcgatcaaatgtttcagaagtatactctttg 209  Q
    |||||||||||||||||| ||||  |||| | || |||||||  | | |||||||| ||| |||| |||| |||||||||||||||||||    
T  2803800 ttttgttgtggagtgtat-gaacgatcaactaataatgaatgcaaacatcatcacaaaattgatctaatgcttcagaagtatactctttg 2803712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 7035910 - 7035819
Alignment:
Q  45 tttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactccattttgttgtggagtgta 136  Q
    ||||| |||||||||||||||| ||| |||| ||||||||||| |||  |||| ||| |||||||||||||||||||||| |||||||||||    
T  7035910 tttggtaagttcttctcatgcaacatgcatctggtcatctccattatgtatctatttcttctttcactaactccattttgctgtggagtgta 7035819  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 26255922 - 26255801
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  ||||||| || || ||||  | ||||||||||| ||||||||  | |||||||| || | |||| ||| | |||||||||||||    
T  26255922 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 26255823  T
Q  118 cattttgttgtggagtgtatgg 139  Q
    ||||||||||||| || |||||    
T  26255822 cattttgttgtggcgtatatgg 26255801  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 35968006 - 35968127
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  ||||||| || || ||||  | ||||||||||| ||||||||  | |||||||| || | |||| ||| | |||||||||||||    
T  35968006 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 35968105  T
Q  118 cattttgttgtggagtgtatgg 139  Q
    ||||||||||||| || |||||    
T  35968106 cattttgttgtggcgtatatgg 35968127  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 35989418 - 35989539
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  ||||||| || || ||||  | ||||||||||| ||||||||  | |||||||| || | |||| ||| | |||||||||||||    
T  35989418 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 35989517  T
Q  118 cattttgttgtggagtgtatgg 139  Q
    ||||||||||||| || |||||    
T  35989518 cattttgttgtggcgtatatgg 35989539  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 43584773 - 43584652
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  ||||||| || || ||||  | ||||||||||| ||||||||  | |||||||| || | |||| ||| | |||||||||||||    
T  43584773 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcactaactc 43584674  T
Q  118 cattttgttgtggagtgtatgg 139  Q
    ||||||||||||| || |||||    
T  43584673 cattttgttgtggcgtatatgg 43584652  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 8987888 - 8987767
Alignment:
Q  18 gtgtttgccgattccacccaaaattgctttggcaagttcttctcatgcagcatacatcgggtcatctccaatataaatctgtttattctttcactaactc 117  Q
    |||||||||| |||  ||||||| || || ||||  | ||||||||||| ||||||||  | |||||||| || | |||| ||| | ||||| |||||||    
T  8987888 gtgtttgccgcttctgcccaaaaatgtttaggcatctccttctcatgcaacatacatctagccatctccattacatatctatttctcctttcgctaactc 8987789  T
Q  118 cattttgttgtggagtgtatgg 139  Q
    ||||||||| ||| || |||||    
T  8987788 cattttgttttggcgtatatgg 8987767  T

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Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 35941003 - 35940954
Alignment:
Q  105 ctttcactaactccattttgttgtggagtgtatggaacagtcaattgatg 154  Q
    |||||||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  35941003 ctttcactcactccattttgttgaggagtgtaaggagcagtcaactgatg 35940954  T

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