View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15342_low_20 (Length: 402)

Name: NF15342_low_20
Description: NF15342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15342_low_20
NF15342_low_20
[»] chr5 (59 HSPs)
chr5 (22-208)||(26755726-26755911)
chr5 (212-402)||(9604535-9604725)
chr5 (212-401)||(40803431-40803623)
chr5 (290-402)||(5359838-5359949)
chr5 (212-402)||(42597577-42597769)
chr5 (296-402)||(702054-702160)
chr5 (212-402)||(28318451-28318642)
chr5 (212-402)||(8258507-8258697)
chr5 (212-401)||(14434922-14435112)
chr5 (215-401)||(35370505-35370694)
chr5 (212-401)||(9910143-9910335)
chr5 (290-402)||(3425904-3426015)
chr5 (291-402)||(25929652-25929763)
chr5 (212-399)||(34259654-34259842)
chr5 (212-402)||(33678269-33678460)
chr5 (290-402)||(36428087-36428200)
chr5 (290-402)||(13118913-13119024)
chr5 (290-402)||(42486788-42486900)
chr5 (290-400)||(9630021-9630131)
chr5 (290-401)||(37822267-37822380)
chr5 (291-402)||(479855-479967)
chr5 (290-402)||(2851803-2851915)
chr5 (212-402)||(3024255-3024447)
chr5 (252-402)||(4616812-4616963)
chr5 (290-396)||(39816686-39816793)
chr5 (290-400)||(13127094-13127204)
chr5 (212-402)||(30753551-30753744)
chr5 (290-342)||(12334478-12334530)
chr5 (290-375)||(19518208-19518293)
chr5 (301-399)||(27979128-27979225)
chr5 (290-400)||(33210484-33210593)
chr5 (290-341)||(9913372-9913423)
chr5 (290-400)||(29959993-29960105)
chr5 (290-400)||(38293737-38293844)
chr5 (353-400)||(16495881-16495928)
chr5 (290-341)||(23258708-23258759)
chr5 (290-341)||(24431981-24432032)
chr5 (368-402)||(3278821-3278855)
chr5 (352-402)||(40563363-40563413)
chr5 (290-341)||(2270965-2271016)
chr5 (212-243)||(9913292-9913323)
chr5 (290-341)||(16495942-16495993)
chr5 (359-402)||(19518306-19518349)
chr5 (213-243)||(37822183-37822213)
chr5 (353-402)||(6114020-6114069)
chr5 (353-402)||(6532690-6532739)
chr5 (353-402)||(13410652-13410701)
chr5 (357-402)||(17069105-17069150)
chr5 (353-402)||(21605759-21605808)
chr5 (357-402)||(36155962-36156007)
chr5 (353-402)||(41802217-41802266)
chr5 (353-402)||(42917229-42917278)
chr5 (212-244)||(2851968-2852000)
chr5 (212-244)||(9630179-9630211)
chr5 (212-244)||(13127251-13127283)
chr5 (290-338)||(32455471-32455519)
chr5 (212-244)||(33210640-33210672)
chr5 (353-401)||(34302760-34302808)
chr5 (290-342)||(38354896-38354948)
[»] chr4 (71 HSPs)
chr4 (212-402)||(26117859-26118055)
chr4 (212-402)||(52607672-52607864)
chr4 (212-402)||(43147600-43147792)
chr4 (85-214)||(29001948-29002077)
chr4 (216-402)||(34828834-34829021)
chr4 (212-402)||(27761504-27761694)
chr4 (290-402)||(50383512-50383624)
chr4 (212-402)||(5970803-5970994)
chr4 (212-402)||(33491265-33491456)
chr4 (290-402)||(352655-352767)
chr4 (290-402)||(29582077-29582189)
chr4 (212-402)||(582881-583072)
chr4 (290-402)||(31998840-31998952)
chr4 (212-402)||(53936611-53936805)
chr4 (212-402)||(1856914-1857106)
chr4 (212-402)||(4720581-4720773)
chr4 (290-402)||(24980124-24980235)
chr4 (212-402)||(45692726-45692917)
chr4 (290-402)||(423262-423375)
chr4 (290-402)||(32845836-32845948)
chr4 (290-402)||(54996209-54996321)
chr4 (212-402)||(27990640-27990832)
chr4 (212-402)||(54505975-54506167)
chr4 (290-402)||(29364292-29364404)
chr4 (290-402)||(50498511-50498620)
chr4 (212-341)||(8256613-8256744)
chr4 (212-341)||(8270031-8270162)
chr4 (296-402)||(23058953-23059062)
chr4 (212-400)||(38008268-38008456)
chr4 (290-399)||(56302951-56303061)
chr4 (290-402)||(56104583-56104695)
chr4 (212-402)||(24535586-24535777)
chr4 (212-400)||(36631139-36631327)
chr4 (212-402)||(126687-126880)
chr4 (352-402)||(48647269-48647319)
chr4 (292-402)||(43363439-43363551)
chr4 (290-400)||(42177524-42177633)
chr4 (301-402)||(50732977-50733078)
chr4 (212-402)||(43735241-43735435)
chr4 (290-400)||(50607799-50607910)
chr4 (212-400)||(50775888-50776074)
chr4 (292-400)||(3763229-3763335)
chr4 (291-400)||(30348348-30348457)
chr4 (352-390)||(32289154-32289192)
chr4 (290-397)||(9356566-9356674)
chr4 (290-402)||(46548865-46548977)
chr4 (353-402)||(53389092-53389141)
chr4 (358-402)||(408179-408223)
chr4 (290-342)||(11038230-11038282)
chr4 (358-390)||(12356730-12356762)
chr4 (212-244)||(28835892-28835924)
chr4 (212-244)||(50733128-50733160)
chr4 (212-243)||(30348267-30348298)
chr4 (290-341)||(33491782-33491833)
chr4 (353-402)||(14802823-14802872)
chr4 (353-402)||(28037797-28037846)
chr4 (353-402)||(33076227-33076276)
chr4 (357-402)||(33491844-33491889)
chr4 (353-402)||(36592280-36592329)
chr4 (357-402)||(37748545-37748590)
chr4 (353-402)||(37855232-37855281)
chr4 (353-402)||(38835961-38836010)
chr4 (353-402)||(47920405-47920454)
chr4 (353-402)||(51436059-51436108)
chr4 (353-402)||(52591915-52591964)
chr4 (290-342)||(1433990-1434042)
chr4 (353-401)||(3716437-3716485)
chr4 (212-244)||(5340246-5340278)
chr4 (290-322)||(28835974-28836006)
chr4 (212-244)||(42177446-42177478)
chr4 (362-402)||(50187617-50187657)
[»] chr2 (51 HSPs)
chr2 (22-214)||(42052345-42052537)
chr2 (212-402)||(6945453-6945644)
chr2 (22-209)||(11973082-11973269)
chr2 (212-402)||(9589226-9589416)
chr2 (290-402)||(1580429-1580541)
chr2 (290-402)||(35896595-35896707)
chr2 (212-402)||(17451386-17451577)
chr2 (212-402)||(21404302-21404493)
chr2 (212-402)||(39620305-39620496)
chr2 (212-402)||(7673399-7673591)
chr2 (212-402)||(4298001-4298195)
chr2 (216-402)||(33493589-33493770)
chr2 (212-402)||(4740335-4740527)
chr2 (252-402)||(14839912-14840062)
chr2 (290-402)||(18998902-18999013)
chr2 (212-400)||(27400844-27401032)
chr2 (212-402)||(40946866-40947058)
chr2 (252-402)||(32401223-32401376)
chr2 (212-401)||(9122260-9122453)
chr2 (261-401)||(44144238-44144378)
chr2 (252-400)||(45157644-45157795)
chr2 (293-402)||(15383127-15383238)
chr2 (290-402)||(32602487-32602599)
chr2 (301-400)||(38064772-38064872)
chr2 (290-402)||(4049158-4049253)
chr2 (292-397)||(30980995-30981099)
chr2 (212-341)||(43440099-43440230)
chr2 (353-402)||(16637272-16637321)
chr2 (357-402)||(40495579-40495624)
chr2 (290-342)||(33494104-33494156)
chr2 (212-244)||(40495717-40495749)
chr2 (352-402)||(19268806-19268857)
chr2 (357-402)||(43440245-43440291)
chr2 (290-339)||(4114844-4114893)
chr2 (353-402)||(4673848-4673897)
chr2 (353-402)||(5092107-5092156)
chr2 (353-402)||(5389447-5389496)
chr2 (353-402)||(6884270-6884319)
chr2 (353-402)||(11088328-11088377)
chr2 (353-402)||(11227738-11227787)
chr2 (353-402)||(11813442-11813491)
chr2 (353-402)||(14533068-14533117)
chr2 (353-402)||(33423260-33423309)
chr2 (353-402)||(34665682-34665731)
chr2 (353-402)||(38963310-38963359)
chr2 (212-244)||(1580351-1580383)
chr2 (358-402)||(16114707-16114751)
chr2 (290-342)||(17821694-17821746)
chr2 (212-244)||(30981155-30981187)
chr2 (212-244)||(35895415-35895447)
chr2 (212-244)||(44143309-44143341)
[»] chr3 (90 HSPs)
chr3 (212-402)||(51350736-51350925)
chr3 (212-402)||(26885077-26885266)
chr3 (212-402)||(26850037-26850228)
chr3 (212-399)||(41982100-41982287)
chr3 (212-402)||(50257912-50258103)
chr3 (212-402)||(40784629-40784819)
chr3 (212-402)||(1021088-1021278)
chr3 (212-402)||(26012301-26012492)
chr3 (212-402)||(41217167-41217357)
chr3 (212-402)||(43745450-43745641)
chr3 (212-402)||(45538748-45538939)
chr3 (290-402)||(40021192-40021304)
chr3 (290-402)||(41282716-41282828)
chr3 (252-402)||(9507015-9507162)
chr3 (252-402)||(9514990-9515137)
chr3 (290-402)||(14653966-14654077)
chr3 (212-402)||(29388799-29388990)
chr3 (212-402)||(30349115-30349306)
chr3 (294-402)||(7862263-7862371)
chr3 (290-402)||(40473947-40474059)
chr3 (290-401)||(33006412-33006523)
chr3 (212-402)||(35137549-35137741)
chr3 (290-402)||(42478800-42478911)
chr3 (212-402)||(1129233-1129424)
chr3 (212-401)||(35500901-35501092)
chr3 (292-402)||(54788469-54788579)
chr3 (290-402)||(26457136-26457249)
chr3 (290-402)||(40477869-40477982)
chr3 (290-402)||(24170043-24170155)
chr3 (290-402)||(25834343-25834455)
chr3 (294-402)||(29491755-29491863)
chr3 (290-401)||(23456567-23456678)
chr3 (290-401)||(36099277-36099388)
chr3 (292-402)||(46671452-46671563)
chr3 (290-402)||(47745941-47746052)
chr3 (290-402)||(51344486-51344596)
chr3 (290-402)||(51756275-51756386)
chr3 (212-402)||(53289334-53289525)
chr3 (212-402)||(37127907-37128098)
chr3 (290-402)||(42622032-42622144)
chr3 (253-341)||(15996996-15997084)
chr3 (290-342)||(25482438-25482490)
chr3 (212-402)||(32636739-32636929)
chr3 (212-402)||(13756410-13756602)
chr3 (352-402)||(39253091-39253141)
chr3 (290-402)||(39908667-39908779)
chr3 (293-402)||(46507535-46507644)
chr3 (290-402)||(48825584-48825697)
chr3 (357-402)||(7352417-7352462)
chr3 (290-402)||(39678212-39678323)
chr3 (357-402)||(39987590-39987635)
chr3 (352-400)||(44522136-44522184)
chr3 (290-402)||(54428609-54428723)
chr3 (290-341)||(10279190-10279240)
chr3 (212-340)||(48825503-48825634)
chr3 (295-400)||(37521615-37521720)
chr3 (357-402)||(34825394-34825439)
chr3 (290-342)||(50412251-50412303)
chr3 (357-400)||(44653290-44653333)
chr3 (292-342)||(35389475-35389525)
chr3 (212-322)||(39987455-39987566)
chr3 (357-402)||(15996932-15996977)
chr3 (357-402)||(19914154-19914199)
chr3 (290-342)||(36220576-36220629)
chr3 (353-402)||(40650178-40650227)
chr3 (353-402)||(46959663-46959712)
chr3 (212-244)||(7352270-7352302)
chr3 (290-342)||(8433600-8433652)
chr3 (290-342)||(8966088-8966140)
chr3 (290-338)||(32945955-32946003)
chr3 (368-400)||(35389544-35389576)
chr3 (290-342)||(45635864-45635916)
chr3 (290-342)||(50029934-50029986)
chr3 (368-400)||(50412332-50412364)
chr3 (358-402)||(52024680-52024724)
chr3 (290-341)||(7352352-7352402)
chr3 (212-243)||(34825539-34825570)
chr3 (364-402)||(25482499-25482537)
chr3 (353-402)||(29786843-29786892)
chr3 (353-402)||(29806130-29806179)
chr3 (353-402)||(44670504-44670553)
chr3 (353-402)||(52058759-52058808)
chr3 (356-384)||(4817254-4817282)
chr3 (290-342)||(23795950-23796002)
chr3 (212-244)||(25482355-25482387)
chr3 (212-244)||(26457057-26457089)
chr3 (212-244)||(42621952-42621984)
chr3 (212-244)||(44379518-44379550)
chr3 (212-244)||(44522261-44522293)
chr3 (353-401)||(52162508-52162556)
[»] chr1 (84 HSPs)
chr1 (212-402)||(31075712-31075904)
chr1 (212-402)||(6329352-6329545)
chr1 (294-402)||(28624589-28624697)
chr1 (212-402)||(24003523-24003714)
chr1 (212-402)||(30263686-30263875)
chr1 (212-402)||(30320994-30321185)
chr1 (290-400)||(34038347-34038457)
chr1 (290-402)||(35874121-35874233)
chr1 (290-402)||(44263759-44263871)
chr1 (212-402)||(51787568-51787762)
chr1 (290-402)||(12105343-12105454)
chr1 (291-402)||(31530493-31530603)
chr1 (212-402)||(51056308-51056499)
chr1 (290-402)||(9587755-9587866)
chr1 (290-402)||(38260914-38261026)
chr1 (290-402)||(42275518-42275630)
chr1 (290-402)||(48977058-48977170)
chr1 (212-402)||(45622584-45622778)
chr1 (290-402)||(52345781-52345895)
chr1 (212-402)||(52861401-52861592)
chr1 (212-341)||(6966081-6966211)
chr1 (212-341)||(8396521-8396651)
chr1 (290-402)||(30571121-30571232)
chr1 (290-402)||(32805845-32805957)
chr1 (212-401)||(47544407-47544599)
chr1 (290-402)||(52441261-52441370)
chr1 (290-400)||(46234946-46235055)
chr1 (212-341)||(38717902-38718034)
chr1 (212-400)||(46362127-46362314)
chr1 (212-402)||(6526532-6526722)
chr1 (290-402)||(24381429-24381542)
chr1 (290-402)||(31821764-31821877)
chr1 (212-341)||(48760274-48760404)
chr1 (290-342)||(3399325-3399377)
chr1 (212-402)||(10348128-10348319)
chr1 (290-341)||(47693372-47693423)
chr1 (290-402)||(24230753-24230866)
chr1 (212-402)||(2249691-2249881)
chr1 (292-402)||(21882918-21883029)
chr1 (292-339)||(14152871-14152918)
chr1 (313-402)||(12907393-12907482)
chr1 (352-402)||(25702701-25702751)
chr1 (290-402)||(52180346-52180456)
chr1 (357-402)||(13203165-13203210)
chr1 (212-400)||(17553920-17554107)
chr1 (261-402)||(42958977-42959111)
chr1 (290-341)||(21072936-21072987)
chr1 (364-402)||(7489179-7489217)
chr1 (352-402)||(30896924-30896974)
chr1 (353-402)||(26307792-26307841)
chr1 (353-402)||(31401468-31401517)
chr1 (353-402)||(39190803-39190852)
chr1 (357-397)||(477684-477724)
chr1 (358-402)||(8396461-8396505)
chr1 (212-244)||(13203040-13203072)
chr1 (353-401)||(26102719-26102767)
chr1 (290-342)||(44382199-44382251)
chr1 (212-244)||(46641787-46641819)
chr1 (290-342)||(48796202-48796254)
chr1 (212-243)||(12907530-12907561)
chr1 (212-243)||(31821675-31821706)
chr1 (290-341)||(34100894-34100945)
chr1 (290-341)||(45809616-45809667)
chr1 (290-341)||(51610719-51610770)
chr1 (372-402)||(14152953-14152983)
chr1 (290-340)||(26307726-26307776)
chr1 (353-402)||(3399263-3399311)
chr1 (290-386)||(24245663-24245749)
chr1 (353-402)||(31930944-31930993)
chr1 (353-402)||(37498854-37498903)
chr1 (353-402)||(38862294-38862343)
chr1 (353-402)||(45673426-45673475)
chr1 (211-244)||(46235102-46235135)
chr1 (365-402)||(47693314-47693351)
chr1 (353-402)||(51369428-51369477)
chr1 (212-244)||(7227674-7227706)
chr1 (368-400)||(7227817-7227849)
chr1 (353-401)||(16482687-16482735)
chr1 (212-244)||(31084877-31084909)
chr1 (290-342)||(32144849-32144901)
chr1 (290-342)||(46707528-46707580)
chr1 (212-244)||(48976979-48977011)
chr1 (353-401)||(52303125-52303173)
chr1 (212-244)||(52441181-52441213)
[»] chr8 (60 HSPs)
chr8 (21-212)||(37714526-37714717)
chr8 (212-402)||(37676041-37676231)
chr8 (68-209)||(44097698-44097839)
chr8 (212-402)||(36667347-36667538)
chr8 (290-402)||(45452568-45452681)
chr8 (290-402)||(2261145-2261257)
chr8 (291-399)||(34166093-34166201)
chr8 (290-402)||(40776801-40776913)
chr8 (212-402)||(5328711-5328903)
chr8 (212-402)||(26988491-26988683)
chr8 (212-402)||(1043171-1043362)
chr8 (212-402)||(6631013-6631200)
chr8 (254-402)||(9497650-9497797)
chr8 (212-402)||(39646741-39646932)
chr8 (212-402)||(41720360-41720551)
chr8 (290-402)||(4214678-4214789)
chr8 (22-208)||(9740618-9740801)
chr8 (290-402)||(10706737-10706850)
chr8 (290-402)||(36162304-36162417)
chr8 (212-401)||(117920-118112)
chr8 (212-401)||(7128194-7128386)
chr8 (290-402)||(29265771-29265886)
chr8 (212-402)||(6982889-6983080)
chr8 (212-402)||(40267593-40267785)
chr8 (290-402)||(39300265-39300379)
chr8 (290-402)||(44541991-44542103)
chr8 (290-402)||(26522149-26522261)
chr8 (292-402)||(38329635-38329744)
chr8 (292-400)||(43842026-43842134)
chr8 (290-402)||(15451636-15451742)
chr8 (212-339)||(38210493-38210622)
chr8 (290-341)||(27847640-27847691)
chr8 (324-402)||(29454425-29454503)
chr8 (212-400)||(44000665-44000852)
chr8 (352-402)||(45210400-45210450)
chr8 (357-402)||(35588058-35588103)
chr8 (290-402)||(40578805-40578915)
chr8 (356-400)||(2749556-2749600)
chr8 (290-341)||(12180096-12180147)
chr8 (290-341)||(12424524-12424575)
chr8 (212-281)||(15451525-15451595)
chr8 (353-402)||(23286676-23286725)
chr8 (353-402)||(44935010-44935059)
chr8 (290-342)||(27172086-27172138)
chr8 (212-244)||(40578966-40578998)
chr8 (290-341)||(24937768-24937819)
chr8 (212-243)||(26522070-26522101)
chr8 (358-397)||(34633981-34634020)
chr8 (353-402)||(4475156-4475205)
chr8 (353-402)||(12163189-12163238)
chr8 (353-402)||(12407617-12407666)
chr8 (353-402)||(24377422-24377471)
chr8 (353-402)||(29459745-29459794)
chr8 (353-402)||(29773556-29773605)
chr8 (353-402)||(34520683-34520732)
chr8 (353-402)||(36002467-36002516)
chr8 (212-244)||(2749419-2749451)
chr8 (212-244)||(4214598-4214630)
chr8 (353-401)||(15726136-15726184)
chr8 (212-244)||(34166014-34166046)
[»] chr6 (34 HSPs)
chr6 (252-402)||(243031-243181)
chr6 (294-402)||(22755353-22755461)
chr6 (212-402)||(3141144-3141335)
chr6 (212-402)||(4509542-4509733)
chr6 (212-402)||(11763277-11763468)
chr6 (212-402)||(9661866-9662060)
chr6 (303-402)||(18771992-18772091)
chr6 (252-402)||(8310011-8310161)
chr6 (290-400)||(2564838-2564949)
chr6 (291-400)||(4576499-4576608)
chr6 (290-402)||(33574110-33574222)
chr6 (290-400)||(9686890-9687000)
chr6 (212-402)||(1244930-1245122)
chr6 (290-402)||(23416608-23416720)
chr6 (302-402)||(26958520-26958620)
chr6 (301-402)||(528989-529091)
chr6 (352-397)||(8549799-8549844)
chr6 (364-402)||(33574426-33574464)
chr6 (353-402)||(2259015-2259064)
chr6 (357-402)||(29023858-29023903)
chr6 (261-341)||(12782820-12782900)
chr6 (352-400)||(14779027-14779075)
chr6 (212-244)||(33574337-33574369)
chr6 (290-341)||(31644591-31644642)
chr6 (353-402)||(1339487-1339536)
chr6 (353-402)||(6848621-6848670)
chr6 (353-402)||(11446847-11446896)
chr6 (353-402)||(17545715-17545764)
chr6 (353-402)||(24487533-24487582)
chr6 (357-402)||(31644651-31644696)
chr6 (353-402)||(32834020-32834069)
chr6 (212-244)||(4576655-4576687)
chr6 (212-244)||(14779174-14779206)
chr6 (212-244)||(26958661-26958693)
[»] chr7 (55 HSPs)
chr7 (212-402)||(3602384-3602570)
chr7 (212-402)||(15716017-15716208)
chr7 (212-398)||(45232151-45232338)
chr7 (212-402)||(46575207-46575398)
chr7 (290-402)||(1806593-1806705)
chr7 (212-402)||(24812193-24812384)
chr7 (212-402)||(17306705-17306894)
chr7 (212-401)||(18520029-18520221)
chr7 (290-402)||(26605239-26605350)
chr7 (290-401)||(3214631-3214742)
chr7 (212-402)||(28264854-28265046)
chr7 (252-402)||(7583153-7583303)
chr7 (212-341)||(30076813-30076943)
chr7 (290-402)||(41047024-41047136)
chr7 (212-402)||(47369322-47369514)
chr7 (212-400)||(35291430-35291619)
chr7 (218-402)||(39558719-39558903)
chr7 (212-402)||(23110534-23110724)
chr7 (212-402)||(47642611-47642801)
chr7 (212-402)||(24953030-24953222)
chr7 (352-402)||(5583106-5583156)
chr7 (212-402)||(11750523-11750716)
chr7 (290-402)||(26413787-26413902)
chr7 (290-401)||(38665642-38665754)
chr7 (290-401)||(1269184-1269294)
chr7 (212-400)||(15954245-15954433)
chr7 (292-402)||(22967598-22967709)
chr7 (290-342)||(46291281-46291333)
chr7 (212-400)||(35357815-35358005)
chr7 (290-339)||(21936694-21936743)
chr7 (357-402)||(38666001-38666046)
chr7 (352-397)||(6791681-6791726)
chr7 (290-401)||(15584722-15584833)
chr7 (352-400)||(31346769-31346817)
chr7 (290-342)||(32529363-32529415)
chr7 (212-244)||(7574655-7574687)
chr7 (293-400)||(37504727-37504841)
chr7 (212-244)||(38666140-38666172)
chr7 (357-397)||(41968671-41968711)
chr7 (261-341)||(43631208-43631288)
chr7 (290-341)||(16087127-16087178)
chr7 (290-341)||(29682212-29682263)
chr7 (290-341)||(30891456-30891507)
chr7 (353-402)||(3910039-3910088)
chr7 (353-402)||(8648282-8648331)
chr7 (353-402)||(21699538-21699587)
chr7 (290-390)||(30878439-30878538)
chr7 (353-402)||(41913341-41913390)
chr7 (353-402)||(46291347-46291396)
chr7 (212-244)||(1269112-1269144)
chr7 (290-342)||(15591557-15591609)
chr7 (356-400)||(30891394-30891438)
chr7 (212-244)||(38665561-38665593)
chr7 (212-244)||(41046942-41046974)
chr7 (358-402)||(43631299-43631343)
[»] scaffold0308 (1 HSPs)
scaffold0308 (212-402)||(7324-7506)
[»] scaffold0432 (1 HSPs)
scaffold0432 (290-402)||(3211-3324)
[»] scaffold0125 (2 HSPs)
scaffold0125 (360-401)||(32451-32492)
scaffold0125 (306-341)||(32395-32430)
[»] scaffold0667 (1 HSPs)
scaffold0667 (290-342)||(3-56)
[»] scaffold0077 (1 HSPs)
scaffold0077 (353-402)||(48121-48170)
[»] scaffold0005 (1 HSPs)
scaffold0005 (353-402)||(36855-36904)
[»] scaffold1319 (1 HSPs)
scaffold1319 (212-244)||(147-179)
[»] scaffold0628 (1 HSPs)
scaffold0628 (354-402)||(6116-6164)
[»] scaffold0068 (1 HSPs)
scaffold0068 (361-397)||(34927-34963)


Alignment Details
Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 26755911 - 26755726
Alignment:
Q  22 ataccaacccacttaaaaacgagatgccacaggccactgaagatgccacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaacac 121  Q
    ||||||||||||||| |||||||||||||||||||||  |||||| |||| ||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  26755911 ataccaacccacttataaacgagatgccacaggccaccaaagatgtcacatcgcaaaatgaggtgaaccgccgtctccga-ctaccacaacctccaacac 26755813  T
Q  122 aaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgtttcgaaaaagtcgccaaacaaaca 208  Q
    ||||||  ||| ||| |||||||||||| ||||||  ||||||||||||| |||||| ||||||| |||| |||| |||||||||||    
T  26755812 aaccgttgtccacctaatgaagaacccttctgcgaagcaaattatcttttcttggcaatctgttttgaaagagtcaccaaacaaaca 26755726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 9604535 - 9604725
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataat 311  Q
    |||||||||||||||||||||||||||||||||       |||||| | ||||||| ||||||| |||||        ||||||||||||||||||||||    
T  9604535 atatttatattttatagaacaacatttcataagaaaaacatcatttaattgtttataagaatcaaagtaactttttttacatattatcgtaaaaaataat 9604634  T
Q  312 aaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||||||||||||||||||||||||           ||  ||||||  |||||||||||||||||||||||||||||| |||||||    
T  9604635 gaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttctttgacacttttgatgaataagatttagttactataatt 9604725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 401
Target Start/End: Complemental strand, 40803623 - 40803431
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  40803623 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 40803524  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  40803523 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 40803431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 5359949 - 5359838
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||| ||||||||||||    
T  5359949 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc-aaaaaaattaattttatttcgttgacacttttgttgaataagattt 5359851  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  5359850 agttattataatt 5359838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 42597577 - 42597769
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||| ||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  42597577 atatttatattttatataacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 42597676  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  42597677 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 42597769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 296 - 402
Target Start/End: Complemental strand, 702160 - 702054
Alignment:
Q  296 tatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttat 395  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |          ||||||||||| ||||||||||||||||||||||||||||||||    
T  702160 tatcgtaaaaaataatcaatgttctcaattatgagtgataaaaaatttaaaaaaattaattttatttcgttgacacttttgatgaataagatttagttat 702061  T
Q  396 tataatt 402  Q
    |||||||    
T  702060 tataatt 702054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 28318451 - 28318642
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||| |||||||        ||||||||||||||||| |||    
T  28318451 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaattatagtaactttttttacatattatcgtaaaaattaa 28318550  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||| |||||||||||||||||||||    
T  28318551 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgagtaagatttagttattataatt 28318642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 8258697 - 8258507
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||||||||||||||         |||||| | ||||||| |||||||||||||        |||||||||| ||||||||||    
T  8258697 atatttatattttatagaacaacatttcataacaaaaaacatcatttaattgtttataagaatcatagtaactttttt-acatattatcctaaaaaataa 8258599  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  8258598 tgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 8258507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 212 - 401
Target Start/End: Original strand, 14434922 - 14435112
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  14434922 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 14435021  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           |   |||||| ||||||||||||||||||||||||||| ||||||||||    
T  14435022 tgaatgttctcaattatgagtgataaaaattttaaaaaataaacaattatttcgttgacacttttgatgaataagatttaattattataat 14435112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 401
Target Start/End: Original strand, 35370505 - 35370694
Alignment:
Q  215 tttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataa 313  Q
    |||||||||||||||| |||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||| |    
T  35370505 tttatattttatagaataacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataatga 35370604  T
Q  314 atgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    ||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  35370605 atgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 35370694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 401
Target Start/End: Original strand, 9910143 - 9910335
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        | |||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  9910143 atatttatattttatagaacaccatttcataagaaaaaacataatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 9910242  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  9910243 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 9910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 3426015 - 3425904
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||  || ||||||||||||||||||||||    
T  3426015 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc-aaaaaatttaattttatttcattaacacttttgatgaataagattt 3425917  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  3425916 agttgttataatt 3425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 25929763 - 25929652
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||    
T  25929763 catattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaatataataattttattttgttgacattttttatgaataagattta 25929664  T
Q  391 gttattataatt 402  Q
     |||||||||||    
T  25929663 attattataatt 25929652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 399
Target Start/End: Complemental strand, 34259842 - 34259654
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  34259842 atatttatattttatagaacatcatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 34259743  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattata 399  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| |||| ||||||||| ||||||||    
T  34259742 tgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgagtaagatttaattattata 34259654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 33678460 - 33678269
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||||||||| |||||        |||||| | | ||||| |||||||||||||        |||||||| ||||||||||||    
T  33678460 atatttatattttatagaacaacattttataagaaaaaacatcatttaattatttataagaatcatagtaactttttttacatattaccgtaaaaaataa 33678361  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||||||||||||            ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  33678360 tgaatgttctcaattatgagtgataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 33678269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 36428087 - 36428200
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||| |||| ||||||||| |||||| |||||||||||||         |||||||| || |||||||||||||||||||||||||    
T  36428087 acatattatcgtaaaaaaataatcaatgttctcgattatgggtgataaaaattcaaaaaatattaattttaattcgttgacacttttgatgaataagatt 36428186  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  36428187 tagttattataatt 36428200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 13119024 - 13118913
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| |||||| |||| |||||| || ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  13119024 acatattatcataaaaa-taatgaatgttgtcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 13118926  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  13118925 agttattataatt 13118913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 42486788 - 42486900
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         || |||||||||||||||| |||| |||||||| ||||    
T  42486788 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaatagtatttttattttgttgacattttttatgaataaaattt 42486887  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  42486888 agttattataatt 42486900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 9630131 - 9630021
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||         ||||||||||| ||| |||||||| |||||||||||||    
T  9630131 acatattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattcaaaaaaaattaattttatttcgttaacacttttaatgaataagattt 9630032  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  9630031 agttattataa 9630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 37822267 - 37822380
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagat 387  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||    
T  37822267 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagat 37822366  T
Q  388 ttagttattataat 401  Q
    ||||||||||||||    
T  37822367 ttagttattataat 37822380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 479855 - 479967
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaa-ttttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||||||||||| ||| |||||||| ||||||||||||||||           || |||||||| ||||||||||||||||||||||||||    
T  479855 catattatcgtaaaaaataatcaatattctcaatcatgagtgataaaaattaaaaaaaaaaaaaattttatttcgttgacacttttgatgaataagattt 479954  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  479955 agttattataatt 479967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 2851915 - 2851803
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||           ||  |||||| ||||||| ||||||||||||| ||||    
T  2851915 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgttgacatttttgatgaataaaattt 2851816  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  2851815 agttattataatt 2851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 3024255 - 3024447
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||| ||||||||||    
T  3024255 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatagtaaaaaata 3024354  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||||||||||||||| |||||||||||||           ||  |||||| ||||| || ||||||||||||||||||||||||||||||    
T  3024355 atgaatgttctcaattataagtgataaaaatttaaaaaaataaaaaattatttcgttgatacgtttgatgaataagatttagttattataatt 3024447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 4616963 - 4616812
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnn 350  Q
    |||||| | ||||||| |||||||||||||        || ||||||||||||||| || | |||||||||||| |||||||||||||||||            
T  4616963 tcatttcattgtttataagaatcatagtaattttttttacttattatcgtaaaaaaatattcaatgttctcaatcatgagtgataaaaattcaaaaaaac 4616864  T
Q  351 ntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
      |||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  4616863 taaattttatttcgttaacacttttgatgaataagatttagttattataatt 4616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 396
Target Start/End: Original strand, 39816686 - 39816793
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||||||||         |||||||| || | |||||||||||||||||||||||    
T  39816686 acatattatcgtaaaaaaataatcaatgttctcaattatgggtgataaaaattcaaaaaatattaattttaattcgctgacacttttgatgaataagatt 39816785  T
Q  389 tagttatt 396  Q
    ||||||||    
T  39816786 tagttatt 39816793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 13127204 - 13127094
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||| |||||  || |||||||||||||||| |||||||||         ||||||||||| ||| ||||||||||||||||||||||    
T  13127204 acatattatcataaaatataatcgatattctcaattatgagtgctaaaaattcaaaaaaaattaattttatttcgttaacacttttgatgaataagattt 13127105  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  13127104 agttattataa 13127094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 30753551 - 30753744
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn--tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||         |||||| | |||||||  ||||||||||||        ||||||||||||||||||||    
T  30753551 atatttatattttatagaacaacatttcataagtaaaaaacatcatttcattgtttatacgaatcatagtaattttttt-acatattatcgtaaaaaata 30753649  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnn--taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||||||||||||||||| |||||||| |             ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30753650 atcaatgttctcaattatgaatgataaaattaggaaaaaaataataattttatttcgttgacacttttgatgaataaaatttagttattataatt 30753744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 12334530 - 12334478
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12334530 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc 12334478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 375
Target Start/End: Original strand, 19518208 - 19518293
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacactttt 375  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||         ||||||||||| ||||||||||||    
T  19518208 acatattatcgtaaaaaataatgaatgttctcaattatgaatgataaaaattcaaaaaaatataattttatttcgttgacactttt 19518293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 27979225 - 27979128
Alignment:
Q  301 taaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattata 399  Q
    ||||||||||| |||||||| |||||||||||||||||||||         ||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  27979225 taaaaaataatcaatgttcttaattatgagtgataaaaattcaaaaaaaa-taattttatttcgttggtacttttgatgaataagatttagttattata 27979128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 33210593 - 33210484
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||         ||| ||||||| ||| | ||||||||||||||||||||    
T  33210593 acatattatcgtaaaatataatcaatattctcaattatgagtgttaaaaattc-aaaaaaattaaatttatttcgttaatacttttgatgaataagattt 33210495  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  33210494 agttattataa 33210484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 9913372 - 9913423
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  9913372 acatattatcgtaaaacataatgaatgttctcaattatgtgtgataaaaatt 9913423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 29960105 - 29959993
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn--taattttattttgttgacacttttgatgaataagat 387  Q
    |||||| ||||||||| ||||| ||| |||||||||||||||| |||||||||           ||||||||||| ||| |||||| ||| |||||||||    
T  29960105 acatataatcgtaaaatataatcaatattctcaattatgagtgctaaaaattcaaaaaaaaaattaattttatttcgttaacacttctgacgaataagat 29960006  T
Q  388 ttagttattataa 400  Q
    |||||||||||||    
T  29960005 ttagttattataa 29959993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 38293844 - 38293737
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||| |||||||||||||||| ||||||||  |  |||||||||||||||||         ||||||||||| |||   ||||||||| ||||||||||    
T  38293844 acataatatcgtaaaaaataatcaatgttcttcaacatgagtgataaaaattcaaaaaatattaattttatttcgtt---acttttgataaataagattt 38293748  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  38293747 agttattataa 38293737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 400
Target Start/End: Complemental strand, 16495928 - 16495881
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  16495928 aattttatttcgttaacacttctgatgaataagatttagttattataa 16495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 23258708 - 23258759
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||||||||| || |||||| |||||||| ||||||||||    
T  23258708 acatattatcgtaaaaaataatcaaagttctctattatgagcgataaaaatt 23258759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 24431981 - 24432032
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| ||||||||| |||||||| ||||||||||    
T  24431981 acatattatcgtataaaataatcaatgttctctattatgagcgataaaaatt 24432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 402
Target Start/End: Complemental strand, 3278855 - 3278821
Alignment:
Q  368 acacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||||||||    
T  3278855 acacttttgatgaataagatttagttattataatt 3278821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 40563363 - 40563413
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||||||||    
T  40563363 taattttatttcgttgatgcttttaatgaataagatttagttattataatt 40563413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 2270965 - 2271016
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  2270965 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 2271016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 9913292 - 9913323
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  9913292 atatttatattttatagaacaacatttcataa 9913323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 16495993 - 16495942
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||| ||||| ||| |||||||||||||||  ||||||||    
T  16495993 acatattatcgtaaaatataatcaatattctcaattatgagtactaaaaatt 16495942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 402
Target Start/End: Original strand, 19518306 - 19518349
Alignment:
Q  359 attttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||| |||||||||||| ||||||||||||||||||||| ||||    
T  19518306 atttcgttgacacttttaatgaataagatttagttattacaatt 19518349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 243
Target Start/End: Original strand, 37822183 - 37822213
Alignment:
Q  213 tatttatattttatagaacaacatttcataa 243  Q
    |||||||||||||||||||||||||||||||    
T  37822183 tatttatattttatagaacaacatttcataa 37822213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 6114020 - 6114069
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  6114020 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 6114069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 6532739 - 6532690
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  6532739 aattttattgcgttgacatttttggtaaataagatttagttattataatt 6532690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 13410701 - 13410652
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||| ||||| |  ||||||||||||||||||||||    
T  13410701 aattttattgtgttgacatttttggtagataagatttagttattataatt 13410652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 17069150 - 17069105
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||    
T  17069150 ttatttcgtttacacttttgatgaataagatttaatcattataatt 17069105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 21605808 - 21605759
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  21605808 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 21605759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 36156007 - 36155962
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||    
T  36156007 ttatttcgtttacacttttgatgaataagatttaatcattataatt 36155962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 41802266 - 41802217
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| || |||| ||||||| ||||||||||| |||||||||||    
T  41802266 aattttatttagtcgacatttttgataaataagatttaattattataatt 41802217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 42917278 - 42917229
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  42917278 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 42917229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 2852000 - 2851968
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||| ||||||||||||||||    
T  2852000 atatttatattttataaaacaacatttcataag 2851968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 9630211 - 9630179
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  9630211 atatttatattttatagaacatcatttcataag 9630179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 13127283 - 13127251
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  13127283 atatttatattttatagaacatcatttcataag 13127251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 338
Target Start/End: Complemental strand, 32455519 - 32455471
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaa 338  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||    
T  32455519 acatattatcgtataaaataatcaaagttctctattatgagcgataaaa 32455471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 33210672 - 33210640
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  33210672 atatttatattttatagaacatcatttcataag 33210640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 34302808 - 34302760
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    ||||||| | |||||||  ||||| ||||||||||||||||||||||||    
T  34302808 aattttactgtgttgacgattttggtgaataagatttagttattataat 34302760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 38354896 - 38354948
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||| ||| |||||||||||    
T  38354896 acatattatcgtataaaataatcaaagttctctattacgagcgataaaaattc 38354948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 26118055 - 26117859
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||        |||||||||||||||||||||    
T  26118055 atatttatattttatagaacaacatttcataagaaaaaacatcattttactgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 26117956  T
Q  311 taaatgttctcaattatgagtgataaaaattc-----nnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||||||||||||||              ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26117955 taaatgttctcaattatgagtgataaaaattcaaaaaaaaaaataataattttatttcgttgacacttttgatgaataagatttagttattataatt 26117859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 52607672 - 52607864
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||| ||||||        |||||||||||||||| |||||||||||||        |||||||||||||||||||||    
T  52607672 atatttatattttatagaacaacattccataagaaaaaacatcattttactgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 52607771  T
Q  311 taaatgttctcaattatgagtgataaaaattc-nnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||||||| ||||||          ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  52607772 taaatgttctcaattatgagtgatagaaattcaaaaaaataataattttatttcgttgacacttttgatgaataagatttaattattataatt 52607864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 43147792 - 43147600
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||| ||||||||||        |||||||| ||||||| |||||||||||||         ||||||||||||||||||||    
T  43147792 atatttatattttatagaacaatatttcataagaaaaaacatcattttattgtttataagaatcatagtaacttttatttacatattatcgtaaaaaata 43147693  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||||||          ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  43147692 ataaatgttctcaattatgagtgataaaaattcaaaaaaaataaaaattattttgttgacacttttgatgaataagatttagttattataatt 43147600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 29001948 - 29002077
Alignment:
Q  85 tgaaccgccgtctccgggctaccacaacctccaacacaaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgt 184  Q
    |||||||||||||||||||| |||||||||||||||||  |||  |||||||| ||||||||| ||||||||  |||||| ||||||||||||| |||||    
T  29001948 tgaaccgccgtctccgggctgccacaacctccaacacagtcgttgtcctcctggtgaagaaccatcctgcgaatcaaattgtcttttgttggcaatctgt 29002047  T
Q  185 ttcgaaaaagtcgccaaacaaacactgata 214  Q
    ||||||  ||||||||||||||||||||||    
T  29002048 ttcgaaggagtcgccaaacaaacactgata 29002077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 216 - 402
Target Start/End: Complemental strand, 34829021 - 34828834
Alignment:
Q  216 ttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaa 314  Q
    |||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||        ||||||||| ||||||||| |||||    
T  34829021 ttatattttatagaacaacatttcataagaaaaaatatcattttactgtttataagaatcatagtaactttttttacatattatagtaaaaaattataaa 34828922  T
Q  315 tgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||||||||||          |   |||||| |||||||||||||||||||||||||||||||||||||||    
T  34828921 tgttctcaattatgagtgataaaaattcaaaaaaaaaaataattatttcgttgacacttttgatgaataagatttagttattataatt 34828834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 27761504 - 27761694
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        | |||| | ||||||| |||||||||||||        |||||||||| ||||||||||    
T  27761504 atatttatattttatagaacatcatttcataagaaaaaacattatttcattgtttataagaatcatagtaattttttt-acatattatcataaaaaataa 27761602  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||| |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27761603 tgaatgctctcaattatgagtgataaaaattcaaaaataaataattttattttgttgacacttttgatgaataagatttagttattataatt 27761694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 50383512 - 50383624
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||    
T  50383512 acatattatcgtaaaaaataatcgatgttctcaattatgagtgataaaaattcaaaaaaaattaattttatttcgttgacacttttgatgaataagattt 50383611  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  50383612 agttattataatt 50383624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 5970803 - 5970994
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||| | |||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  5970803 atatttatattttatagaatatcatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 5970902  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5970903 tgaatgttctcgattatgagtgataaaaattcaaaaagtaataattttattttgttgacatttttgatgaataagatttagttattataatt 5970994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 33491265 - 33491456
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  33491265 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 33491364  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33491365 tgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagatttagttattataatt 33491456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 352655 - 352767
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  352655 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 352754  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  352755 agttattataatt 352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 29582189 - 29582077
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||| ||||  ||||||||||||||||||||    
T  29582189 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattcaaaaaaaattaattttatttcgttggtacttttgatgaataagattt 29582090  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  29582089 agttattataatt 29582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 583072 - 582881
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| |||| |||||        |||||| ||||||||| |||||||||||||        |||||||||||||||||||||    
T  583072 atatttatattttatagaacaatattttataagaaaaaacatcatttaactgtttataagaatcatagtaattttttttacatattatcgtaaaaaataa 582973  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||| |||||||||||||||||||||||||||||||||||    
T  582972 tgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgtttacacttttgatgaataagatttagttattataatt 582881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 31998952 - 31998840
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  31998952 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 31998853  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  31998852 agttattataatt 31998840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 53936611 - 53936805
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  53936611 atatttatattttatagaacaacatttcataagaaaaaacatcatttaa-tgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 53936709  T
Q  310 ataa---atgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||   ||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  53936710 ataataaatgttctcaattatgagtgataaaaattaaaaaaataataattttatttcgttgacacttttgatgaatcagatttagttattataatt 53936805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 1857106 - 1856914
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  1857106 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 1857007  T
Q  311 taaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||| ||||||||||||||||||||||| ||           ||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  1857006 ttaatattctcaattatgagtgataaaaatttaaaaaaaataaaaaattattttgtcgacacttttgatgaataagatttagttattataatt 1856914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 4720773 - 4720581
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  4720773 atatttatattttatagaacaacatttcataagaaaaatcatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 4720674  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||||||||||||||||||||||||||||            ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  4720673 atgaatgttctcaattatgagtgataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 4720581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 24980124 - 24980235
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||    
T  24980124 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc-aaaaaaaataattttatttcgttgacacttttgatgaataagattt 24980222  T
Q  390 agttattataatt 402  Q
    | || ||||||||    
T  24980223 aattgttataatt 24980235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 45692726 - 45692917
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||||||         ||||||||| |||||||||||    
T  45692726 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtagctttttttacatattatagtaaaaaataa 45692825  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||| ||||||||||||||||||||||||||||||    
T  45692826 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaagattatttcgttgacacgtttgatgaataagatttagttattataatt 45692917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 423375 - 423262
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  423375 acatattatcataaaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagatt 423276  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  423275 tagttattataatt 423262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 32845836 - 32845948
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||         ||||||||||||||||||| |||| ||||||||||||     
T  32845836 acatattatcgtaaaaaataatgaatgttctcaattatgagcgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattc 32845935  T
Q  390 agttattataatt 402  Q
    || ||||||||||    
T  32845936 aggtattataatt 32845948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 54996321 - 54996209
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  54996321 acatattatcgtaaaaaataatgaatgttctcaattatgagcaataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 54996222  T
Q  390 agttattataatt 402  Q
    || ||||||||||    
T  54996221 aggtattataatt 54996209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 27990640 - 27990832
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||| ||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  27990640 atatttatattttatataacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttattttacatattatcgtaaaaaata 27990739  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||||||||||||||||||| |||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  27990740 atgaatgttctcaattatgagtaataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 27990832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 54505975 - 54506167
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  54505975 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 54506074  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  |||||| | |||||||||||| ||||||||||||||||||||||||    
T  54506075 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgctgacacttttgacgaataagatttagttattataatt 54506167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 29364404 - 29364292
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||           ||  ||||||  |||||||||||||||||||||||||    
T  29364404 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcattgacacttttgatgaataagattt 29364305  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  29364304 agttattataatt 29364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 50498511 - 50498620
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         |  ||||||||   ||||||||||||||||||||||||    
T  50498511 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaattc---aatttttttttttatttcagtgacacttttgatgaataagattt 50498607  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  50498608 agttattataatt 50498620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 8256744 - 8256613
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  8256744 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 8256645  T
Q  310 ataaatgttctcaattatgagtgataaaaatt 341  Q
    || |||||||||||||||||||||||||||||    
T  8256644 atgaatgttctcaattatgagtgataaaaatt 8256613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 8270162 - 8270031
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  8270162 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 8270063  T
Q  310 ataaatgttctcaattatgagtgataaaaatt 341  Q
    || |||||||||||||||||||||||||||||    
T  8270062 atgaatgttctcaattatgagtgataaaaatt 8270031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 402
Target Start/End: Original strand, 23058953 - 23059062
Alignment:
Q  296 tatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn---taattttattttgttgacacttttgatgaataagatttagt 392  Q
    |||||||||||||||| ||||||||| || |||||| ||||||||||            |||||||||||||||||||||||||||||||||||||||||    
T  23058953 tatcgtaaaaaataatcaatgttctccatcatgagtaataaaaattcaaaaaaaaaaaataattttattttgttgacacttttgatgaataagatttagt 23059052  T
Q  393 tattataatt 402  Q
    ||||||||||    
T  23059053 tattataatt 23059062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 400
Target Start/End: Complemental strand, 38008456 - 38008268
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||| ||||||||| |||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  38008456 atatttatattgtatagaacatcatttcataagaaaaaacatcatttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaatataa 38008358  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | || ||| ||||||||||||| ||||| |||         ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  38008357 tcaaagttatcaattatgagtgctaaaagttcaaaaaaaattaattttatttcgttaacacttttgatgaataagatttagttattataa 38008268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 399
Target Start/End: Complemental strand, 56303061 - 56302951
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn-taattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| ||| || || ||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||    
T  56303061 acatattatcataaaaaataatgaattttgtcgattatgagtgataaaaattcaaaaaaataataattttattttgttgacatttttgatgaataagatt 56302962  T
Q  389 tagttattata 399  Q
    |||||||||||    
T  56302961 tagttattata 56302951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 56104583 - 56104695
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||| |||||||||||||||| ||||||||| || ||| |||||||||||||          ||  |||||| ||||||||||||||||||||||||||    
T  56104583 acataatatcgtaaaaaataatcaatgttctccatcatgggtgataaaaattcaaaacaaaaaaaaattatttcgttgacacttttgatgaataagattt 56104682  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  56104683 agttattataatt 56104695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 24535586 - 24535777
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||| ||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  24535586 atatttatattttatagaacaatatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 24535685  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||| |||||||||||||||||||| |           ||  |||||| |||||||||||||||||||||||||| ||||||||||||    
T  24535686 atgaatgttttcaattatgagtgataaaaaatttaaaaaacaaaaaattatttcgttgacacttttgatgaataagattt-gttattataatt 24535777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 36631139 - 36631327
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| |||| |||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  36631139 atatttatattttataaaacatcatttcataagaaaaaacatcatttcattgtttataagaatcatagtaatttttta-acatattatcgtaaaatataa 36631237  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | || ||| |||||||||| || |||||||||         ||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  36631238 tcaaagttatcaattatgactgctaaaaattcaaaaaaaaataattttatttcgttaacacttttgaagaataagatttagttattataa 36631327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 126880 - 126687
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn---tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaat 308  Q
    ||||||||||||||||||||||||||||||||           |||||| | ||||||| ||||||||| |||        ||||||||| |||||||||    
T  126880 atatttatattttatagaacaacatttcataaaaaaaaaaacatcatttaattgtttataagaatcataataactttttttacatattattgtaaaaaat 126781  T
Q  309 aataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||| |||||||||||||||||||||||||||||           ||  |||||| ||||||| |||| |||||||| |||||||||||||||||    
T  126780 aatgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacattttttatgaataaaatttagttattataatt 126687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 48647269 - 48647319
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48647269 taattttatttcgttgacacttttgatgaataagatttagttattataatt 48647319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 43363551 - 43363439
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||| ||||||||||| ||| ||||||||||||||||| ||||| |||         | |||||||||| ||||||| ||||||||||||||||||    
T  43363551 atattatcataaaaaataatcaatattctcaattatgagtgaaaaaaaattcaaaataaaattaattttatttcgttgacatttttgatgaataagattt 43363452  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  43363451 agttattataatt 43363439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 42177524 - 42177633
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||| ||||| ||| ||||||||||| |||| |||||||||         ||||||||||| ||| ||||||||||||||||| ||||    
T  42177524 acatattatcctaaaatataatcaatattctcaattattagtgttaaaaattcaaaaaaat-taattttatttcgttaacacttttgatgaataatattt 42177622  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  42177623 agttattataa 42177633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 402
Target Start/End: Complemental strand, 50733078 - 50732977
Alignment:
Q  301 taaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||||||| |||||||||||||||||| |||||||||            ||  |||||| |||||||||||||||||||||||||||||||||||||    
T  50733078 taaaaaataatgaatgttctcaattatgagagataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataa 50732979  T
Q  401 tt 402  Q
    ||    
T  50732978 tt 50732977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 43735435 - 43735241
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn---tcattttactgtttattagaatcatagtaannnnnnnn---acatattatcgtaaaa 305  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||| |||||||||||||           |||||||||| |||||    
T  43735435 atatttatattttatagaacaacatttcataagaaaaaaaacatcattttactgtttataagaatcatagtaacttttttctttacatattatcataaaa 43735336  T
Q  306 aataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||| |||||||| |||||||||| |||||  ||          || | |||||| ||||||||| |||||||||||||||||||||||||||||    
T  43735335 aacaatgaatgttcttaattatgagttataaa--ttaaaaaaaaaatattattatttcgttgacactcttgatgaataagatttagttattataatt 43735241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 50607910 - 50607799
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn-taattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||| ||||| ||| |||||||||||||| | ||||||||           ||||||||||| ||| |||||||||| ||||||||||    
T  50607910 acatattatcgtaaaatataatcaatattctcaattatgagcgctaaaaatttaaaaaaataataattttatttcgttaacacttttgacgaataagatt 50607811  T
Q  389 tagttattataa 400  Q
    ||||||||||||    
T  50607810 tagttattataa 50607799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 400
Target Start/End: Complemental strand, 50776074 - 50775888
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| |||| |||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  50776074 atatttatattttataaaacatcatttcataagaaaaaacatcatttcattgtttataagaatcatagtaatttttta-acatattatcgtaaaatataa 50775976  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | || ||| | ||||||||||| |||||||||         ||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  50775975 tcaaagttat-aattatgagtgctaaaaattcaaaaaaat-taattttatttcgttaacacttttgaagaataagatttagttattataa 50775888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 3763335 - 3763229
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttag 391  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||||           ||   ||||| ||| ||||||||||||||||||||||||    
T  3763335 atattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattttaaaaaaaaaaa--atatttcgttaacacttttgatgaataagatttag 3763238  T
Q  392 ttattataa 400  Q
    |||||||||    
T  3763237 ttattataa 3763229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Original strand, 30348348 - 30348457
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||| ||||| ||||| ||| ||||||||||||| || |||||||||          ||  |||||| ||| |||||||||||||||||||||||    
T  30348348 catattatcctaaaatataatcaatattctcaattatgattgctaaaaattcaaaaaaaaaaaaaattatttcgttaacacttttgatgaataagattta 30348447  T
Q  391 gttattataa 400  Q
     |||||||||    
T  30348448 attattataa 30348457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 32289154 - 32289192
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32289154 taattttatttcgttgacacttttgatgaataagattta 32289192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 9356566 - 9356674
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt-cnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| |||| ||           |||||||||||  |||||| |||||||||||||||||    
T  9356566 acatattatcataaaaaataatcaatgttcttaattatgagtgaaaaaatttaaaaataaaattaattttatttcattgacatttttgatgaataagatt 9356665  T
Q  389 tagttatta 397  Q
    || ||||||    
T  9356666 taattatta 9356674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 46548977 - 46548865
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||| |||||||| || |||||| ||||||||   |||||||||          |||||||||| ||||||||||||| | ||||||||||    
T  46548977 acatattatcgtataaaataatcaaagttctctattatgagctttaaaaattcaaaaaaattcaattttatttcgttgacacttttggtaaataagattt 46548878  T
Q  390 agttattataatt 402  Q
    | | |||||||||    
T  46548877 aatcattataatt 46548865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 53389092 - 53389141
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  53389092 aattttattgtgttgacgtttttgataaataagatttagttattataatt 53389141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 408223 - 408179
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||    
T  408223 tattttgtttacacttttgatgaataagatttaatcattataatt 408179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 11038230 - 11038282
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  11038230 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 11038282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 390
Target Start/End: Original strand, 12356730 - 12356762
Alignment:
Q  358 tattttgttgacacttttgatgaataagattta 390  Q
    |||||||||||||||||||||||||||||||||    
T  12356730 tattttgttgacacttttgatgaataagattta 12356762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 28835892 - 28835924
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  28835892 atatttatattttatagaacaacatttcataag 28835924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 50733160 - 50733128
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  50733160 atatttatattttatagaacaacatttcataag 50733128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 30348267 - 30348298
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  30348267 atatttatattttatagaacaacatttcataa 30348298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 33491782 - 33491833
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  33491782 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 33491833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 14802872 - 14802823
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  14802872 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 14802823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 28037846 - 28037797
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  28037846 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 28037797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 33076227 - 33076276
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  33076227 aattttattgcgttgacatttttggtaaataagatttagttattataatt 33076276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 33491844 - 33491889
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| |||||||||||||||||| |||| | |||||||||    
T  33491844 ttattttgtttacacttttgatgaataaggtttaatcattataatt 33491889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 36592280 - 36592329
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||| |||| ||||  | |||||||||||||||||||||||    
T  36592280 aattttattttgtcgacattttttgtaaataagatttagttattataatt 36592329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 37748590 - 37748545
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||    
T  37748590 ttatttcgtttacacttttgatgaataagatttaatcattataatt 37748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 37855281 - 37855232
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  37855281 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 37855232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 38836010 - 38835961
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  38836010 aattttattgcgttgacatttttggtaaataagatttagttattataatt 38835961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 47920454 - 47920405
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||  || |||| ||||||| |||||||||||||||    
T  47920454 aattttattttgttgacgtttatgataaataagacttagttattataatt 47920405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 51436059 - 51436108
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  51436059 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 51436108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 52591964 - 52591915
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  52591964 aattttattgcgttgacatttttggtaaataagatttagttattataatt 52591915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 1433990 - 1434042
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| ||||||||  ||||||||||    
T  1433990 acatattatcgtataaaataattaaagttctctattatgagcaataaaaattc 1434042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 3716485 - 3716437
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||  ||||||  ||||| ||||||||||||||||||||||||    
T  3716485 aattttattgcgttgacgattttggtgaataagatttagttattataat 3716437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 5340278 - 5340246
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  5340278 atatttatattttatagaacatcatttcataag 5340246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 28835974 - 28836006
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctca 322  Q
    |||||||||||||||||||||| ||||||||||    
T  28835974 acatattatcgtaaaaaataattaatgttctca 28836006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 42177446 - 42177478
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  42177446 atatttatattttatagaacatcatttcataag 42177478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Complemental strand, 50187657 - 50187617
Alignment:
Q  362 ttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| ||||||||||||||||||||||| | |||||||||    
T  50187657 ttgtttacacttttgatgaataagatttaatcattataatt 50187617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 9e-43; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 42052537 - 42052345
Alignment:
Q  22 ataccaacccacttaaaaacgagatgccacaggccactgaagatgccacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaacac 121  Q
    ||||||||||||||| ||| ||||||||||| | |    |||||| |||| ||||| | || ||||||||||||||||||||| ||||| ||||||||||    
T  42052537 ataccaacccacttataaatgagatgccacaaggcgtcaaagatgtcacagcgcaagatgaagtgaaccgccgtctccgggctgccacagcctccaacac 42052438  T
Q  122 aaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgtttcgaaaaagtcgccaaacaaacactgata 214  Q
    ||||||  ||||||  |||||| ||||||||||||  |||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  42052437 aaccgttgtcctccaaatgaagtaccctcctgcgaatcaaattgtcttttgttggcaatctgtttcgaaggagtcgccaaacaaacactgata 42052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 6945644 - 6945453
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||         ||||||||||||||||||||    
T  6945644 atatttatattttatagaacaacatttcataagaaaaaacatcattttactgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 6945545  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||||||         ||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6945544 ataaatgttctcaattatgagtgataaaaattc-aaaataaataaatttatttcgttgacacttttgatgaataagatttagttattataatt 6945453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 22 - 209
Target Start/End: Complemental strand, 11973269 - 11973082
Alignment:
Q  22 ataccaacccacttaaaaacgagatgccacaggccactgaagatgccacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaacac 121  Q
    ||||||||||||||| ||| |||||| |||| |||||  |||||| | |||| ||||| || |||||||||  || ||||| | ||||| | ||||||||    
T  11973269 ataccaacccacttataaatgagatgtcacaagccaccaaagatgtcccaacccaaaatgaagtgaaccgctctcaccgggttgccacagcttccaacac 11973170  T
Q  122 aaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgtttcgaaaaagtcgccaaacaaacac 209  Q
    ||||||  |||||||||||||| | ||||||||||  |||||| |||||||||| || ||||||||||| ||||||||||||||||||    
T  11973169 aaccgttgtcctcctgatgaagtatcctcctgcgaatcaaattgtcttttgttgacaatctgtttcgaagaagtcgccaaacaaacac 11973082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 9589416 - 9589226
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataat 311  Q
    |||||||||||||||||||||||||||||||||       |||||| | ||||||| |||||||||||||        |||||||||| |||||||||||    
T  9589416 atatttatattttatagaacaacatttcataagaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcataaaaaataat 9589317  T
Q  312 aaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||||||| |||||||    
T  9589316 gaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttactataatt 9589226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 1580429 - 1580541
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||    
T  1580429 acatattatcataaaaaataatgaatgttctcaattatgagtgataaaaattcaaaaataaataattttattttgttgacacttttgatgaataagattt 1580528  T
Q  390 agttattataatt 402  Q
     ||||||||||||    
T  1580529 tgttattataatt 1580541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 35896595 - 35896707
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  35896595 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 35896694  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  35896695 agttattataatt 35896707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 17451386 - 17451577
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| ||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  17451386 atatttatattttatataacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 17451485  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||| |||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  17451486 tgaatgttctcaattatgaatgataaaaattttaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 17451577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 21404302 - 21404493
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  21404302 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 21404401  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||| |||||||||||||||||||||| |||||||    
T  21404402 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacatttgatgaataagatttagttactataatt 21404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 39620496 - 39620305
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  39620496 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 39620397  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  39620396 ttaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagatttagttattataatt 39620305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 7673399 - 7673591
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  7673399 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 7673498  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||| |||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  7673499 attaatattctcaattatgagtgataaaaatttaaaaaaattaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 7673591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 4298001 - 4298195
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnnt--cattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaat 308  Q
    |||||||||||||||||||||||||||||||||          |||||| |||||||| |||||||||||||         |||||||||||||||||||    
T  4298001 atatttatattttatagaacaacatttcataagaaaaaaacaccatttttctgtttataagaatcatagtaatttatttttacatattatcgtaaaaaat 4298100  T
Q  309 aataaatgttctcaattatgagtgataaaaat-tcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||| ||||||||||||||||||| |||||||| |          ||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  4298101 aatgaatgttctcaattatgagttataaaaatgttaaaaaataataattttatttcgttgacactcttgatgaataagatttagttattataatt 4298195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 402
Target Start/End: Complemental strand, 33493770 - 33493589
Alignment:
Q  216 ttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn--acatattatcgtaaaaaataata 312  Q
    |||||||||||||||||| ||||||||||        |||||||||||||||| |||||||||||||          |||||||||||||||||||||||    
T  33493770 ttatattttatagaacaatatttcataagaaaaaatatcattttactgtttataagaatcatagtaactttttttttacatattatcgtaaaaaataata 33493671  T
Q  313 aatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||| |||||||||||    
T  33493670 aatgttctcaattatgagtgataaaaatt--------aaaaaaattatttagttgacacttttgatgaataagatttaattattataatt 33493589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 4740527 - 4740335
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||  | ||||||| |||||||||||||         ||||||||||||||||||||    
T  4740527 atatttatattttatagaacaacatttcataagaaaaaacatcattagattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 4740428  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  ||||||  ||||||||||||||||||||||||||||||||||||||    
T  4740427 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcattgacacttttgatgaataagatttagttattataatt 4740335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 14840062 - 14839912
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn 351  Q
    |||||| | ||||||| |||||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||              
T  14840062 tcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatttaaaaaaata 14839963  T
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     ||  |||||| ||||||||||||||| |||||||||||||||||||||||    
T  14839962 aaaaattatttcgttgacacttttgattaataagatttagttattataatt 14839912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 18998902 - 18999013
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||    
T  18998902 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatt-taaaagaaaaaaaattatttcgttgacacttttgatgaataagattt 18999000  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  18999001 agttattataatt 18999013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 400
Target Start/End: Complemental strand, 27401032 - 27400844
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        |||||| | | ||||| |||||||||||||        |||||||||||||||| ||||    
T  27401032 atatttatattttatagaacaccatttcataagaaaaaacatcatttcattatttataagaatcatagtaatttttt--acatattatcgtaaaatataa 27400935  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||||||| |||||||||||| |||||||||         | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  27400934 tcaatgttcacaattatgagtgctaaaaattcaaaaaaaaattaattttatttcgttgacacttttgatgaataagatttagttattataa 27400844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 40946866 - 40947058
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  40946866 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaatttcttttacatattatcataaaaaataa 40946965  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgaca-cttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         |||||| ||||||||||||  |||| ||||||||||||||||||||||||||    
T  40946966 tgaatgttctcgattatgagtgataaaaattcaaaaaataataatttcattttgttgacatttttttatgaataagatttagttattataatt 40947058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 32401223 - 32401376
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaat--tcnnnnnn 348  Q
    |||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||              
T  32401223 tcattttactgtttataagaatcatagtaacttttttttacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaataaaaaaaaaa 32401322  T
Q  349 nnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
        |||||||||| ||||||| ||||||||||||||| |||||||||||||||    
T  32401323 taaaaattttatttcgttgacagttttgatgaataagacttagttattataatt 32401376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 401
Target Start/End: Original strand, 9122260 - 9122453
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||| ||         ||||||||||||||||||||    
T  9122260 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataggaatttttttttacatattatcgtaaaaaata 9122359  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattt--tgttgacacttttgatgaataagatttagttattataat 401  Q
    || |||||||||||||||||||||||||||||           ||  ||||||  |||| ||||||||||||||||||||||||||||||||||    
T  9122360 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcctgttaacacttttgatgaataagatttagttattataat 9122453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 261 - 401
Target Start/End: Original strand, 44144238 - 44144378
Alignment:
Q  261 tgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttat 360  Q
    ||||||| |||||||||||||        |||||||||||||||||||||| |||||| ||||||||||| ||||||||||           ||  ||||    
T  44144238 tgtttataagaatcatagtaactttttttacatattatcgtaaaaaataatgaatgttatcaattatgagcgataaaaattaaaaaaaaataaaaattat 44144337  T
Q  361 tttgttgacacttttgatgaataagatttagttattataat 401  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  44144338 ttcgttgacacttttgatgaataagatttagttattataat 44144378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 400
Target Start/End: Complemental strand, 45157795 - 45157644
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn 351  Q
    |||||| | ||||||| |||||||||||||        |||||||||||||||| ||||| || ||| ||||||||||||| |||||||||             
T  45157795 tcatttcattgtttataagaatcatagtaattttttttacatattatcgtaaaatataatcaaagttatcaattatgagtgctaaaaattcaaaaaaaaa 45157696  T
Q  352 ---taattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
       ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  45157695 aattaattttatttcgttaacacttttgatgaataagatttagttattataa 45157644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 15383127 - 15383238
Alignment:
Q  293 tattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt--aattttattttgttgacacttttgatgaataagattta 390  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||||||             |||||||||| ||||| |||||||||||||||||||||    
T  15383127 tattattgtaaacaataattaatgttctcaattatgagtgataaaaatttaaataataaataaattttatttcgttgatacttttgatgaataagattta 15383226  T
Q  391 gttattataatt 402  Q
    ||||||||||||    
T  15383227 gttattataatt 15383238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 32602487 - 32602599
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||| || |||||||| |||||||||||||           ||  |||||| ||||||||||||||||||||| ||||    
T  32602487 acatattatcgtaaaaaataatgaatattttcaattataagtgataaaaattttaaaaaataaaaaattatttcgttgacacttttgatgaataaaattt 32602586  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  32602587 agttattataatt 32602599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 400
Target Start/End: Complemental strand, 38064872 - 38064772
Alignment:
Q  301 taaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatttagttattata 399  Q
    ||||| ||||| ||||||| |||||||||||| |||||||||         | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  38064872 taaaatataattaatgttcacaattatgagtgctaaaaattcaaaaaaaaattaattttatttcgttgacacttttgatgaataagatttagttattata 38064773  T
Q  400 a 400  Q
    |    
T  38064772 a 38064772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 4049158 - 4049253
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||                 |||||| ||||||||||||||||||||||||||    
T  4049158 acatattatggtaaaaaataatgaatgttctcaattatgagtgataaaaa-----------------ttatttcgttgacacttttgatgaataagattt 4049240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 397
Target Start/End: Complemental strand, 30981099 - 30980995
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttag 391  Q
    ||||| || ||||||||||| ||||||||||||||||||||| |||||||          |||||||||||  |||||| ||||||||||||||||||||    
T  30981099 atattctcataaaaaataatcaatgttctcaattatgagtgaaaaaaatt-taaaaaaattaattttatttcattgacatttttgatgaataagatttag 30981001  T
Q  392 ttatta 397  Q
    ||||||    
T  30981000 ttatta 30980995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 341
Target Start/End: Original strand, 43440099 - 43440230
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||| ||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  43440099 atatttatattttataaaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 43440198  T
Q  310 ataaatgttctcaattatgagtgataaaaatt 341  Q
    || | | || ||||||||||||||||||||||    
T  43440199 atgacttttttcaattatgagtgataaaaatt 43440230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 16637272 - 16637321
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  16637272 aattttatttcgttgacacttttgatgaataagatttaatcattataatt 16637321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 40495624 - 40495579
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  40495624 ttatttcgttggcacttttgatgaataagatttagttattataatt 40495579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 33494156 - 33494104
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||||||| ||  ||||| |||||||| |||||||||||    
T  33494156 acatattatcgtaaaaaataatcaaaattctctattatgagcgataaaaattc 33494104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 40495749 - 40495717
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  40495749 atatttatattttatagaacaacatttcataag 40495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 19268806 - 19268857
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttag-ttattataatt 402  Q
    |||||||||||| | |||||||||||| |||||||||||| |||||||||||    
T  19268806 taattttattttatcgacacttttgataaataagatttagtttattataatt 19268857  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 43440245 - 43440291
Alignment:
Q  357 ttattttgttgacacttttgatgaat-aagatttagttattataatt 402  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||    
T  43440245 ttatttcgttgacacgtttgatgaataaagatttagttattataatt 43440291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 4114844 - 4114893
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa 339  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||    
T  4114844 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaa 4114893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 4673848 - 4673897
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  4673848 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 4673897  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 5092156 - 5092107
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  5092156 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 5092107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 5389447 - 5389496
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  5389447 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 5389496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 6884319 - 6884270
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  6884319 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 6884270  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 11088377 - 11088328
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| || || ||||||||| ||||||||||| |||||||||||    
T  11088377 aattttatttcgtcgaaacttttgataaataagatttaattattataatt 11088328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 11227787 - 11227738
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  11227787 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 11227738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 11813442 - 11813491
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  11813442 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 11813491  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 14533068 - 14533117
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  14533068 aattttattgcgttgacatttttggtaaataagatttagttattataatt 14533117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 33423260 - 33423309
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  33423260 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 33423309  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 34665731 - 34665682
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  34665731 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 34665682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 38963310 - 38963359
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  38963310 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 38963359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 1580351 - 1580383
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  1580351 atatttatattttatagaacatcatttcataag 1580383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 16114707 - 16114751
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| ||||||||||||| ||||||||| | |||||||||    
T  16114707 tattttgtttacacttttgatgattaagatttaatcattataatt 16114751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 17821746 - 17821694
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||| || |||||||| || |||||| |||||||| |||||||||||    
T  17821746 acatattatcatataaaataatcaaagttctctattatgagcgataaaaattc 17821694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 30981187 - 30981155
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  30981187 atatttatattttatagaacatcatttcataag 30981155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 35895415 - 35895447
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  35895415 atatttatattttatagaacatcatttcataag 35895447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 44143309 - 44143341
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  44143309 atatttatattttatagaacatcatttcataag 44143341  T

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Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 51350736 - 51350925
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| ||||||||| |||||||||||||        |||||||||||||||||||||    
T  51350736 atatttatattttatagaacaacatttcataagaaaaaacatcatttgactgtttataagaatcatagtaattttttttacatattatcgtaaaaaataa 51350835  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||| ||          ||  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  51350836 taaatgttctcaattatgagtgataaaatttaaaaaaaatata--tttatttcgttgacacttttgatgaataagatttagttattataatt 51350925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 26885077 - 26885266
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| ||||||||||        |||||||||||||||| ||||||||||||         |||||||||||||||||||||    
T  26885077 atatttatattttatagaacaatatttcataagaaaaaacatcattttactgtttataagaatcatagtacttttttttacatattatcgtaaaaaataa 26885176  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| ||||||||||||||||||||||||||          ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  26885177 taaattttctcaattatgagtgataaaaattcaaaacaaaaaaa--ttatttcgttgacacttttgatgaataagatttagttattataatt 26885266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 26850228 - 26850037
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  26850228 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaattttttttacatattatcgtaaaaaataa 26850129  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||||||| |||||||    
T  26850128 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttactataatt 26850037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 399
Target Start/End: Complemental strand, 41982287 - 41982100
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| ||||||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  41982287 atatttatattttataaaacaacatttcataagaaaaaacatcatttcattgtttataagaatcataataattttttt-acatattatcgtaaaaaataa 41982189  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattata 399  Q
    | |||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41982188 tcaatgttctcaattatgagtgataaaaattataaaaaaattaattttatttcgttgacacttttgatgaataagatttagttattata 41982100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 50258103 - 50257912
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  50258103 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 50258004  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  50258003 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaatcatttcgttgacacttttgatgaataagatttagttattataatt 50257912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 40784629 - 40784819
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  40784629 atatttatattttatagaacattatttcataagaaagaacatcatttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaaaataa 40784727  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||||||||||| |          ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40784728 tcaatgttctcaattatgagtgataaaaaattttaaaaaattaattttatttcgttgacacttttgatgaataagatttagttattataatt 40784819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 1021278 - 1021088
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  1021278 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttat-agaatcatagtaactttttttacatattatcgtaaaaaataa 1021180  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||| ||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  1021179 tgaatgttcttaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 1021088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 26012301 - 26012492
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||| |||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  26012301 atatttatattttctagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 26012400  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||||||||||||            ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  26012401 tgaatgttctcaattatgagtgataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 26012492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 41217357 - 41217167
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  41217357 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 41217258  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||| ||||||||||||    
T  41217257 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagattt-gttattataatt 41217167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 43745450 - 43745641
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        |||||| | ||||||| ||||| ||| |||        |||||||||| ||||||||||    
T  43745450 atatttatattttatagaacatcatttcataagaaaaaatatcatttcattgtttataagaattataataattttttttacatattatcataaaaaataa 43745549  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  43745550 tgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagatttagttattataatt 43745641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 45538748 - 45538939
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  45538748 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 45538847  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  45538848 tgaatgttctcgattatgagtgataaaaattcaaaaaatagtaattttattttgttgacattttttatgaataagatttagttattataatt 45538939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 40021304 - 40021192
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||    
T  40021304 acatattatcgtaaaaaataatcaatgttcttaatcatgagtgataaaaattcaaaaaaaataaattttatttcgttgacacttttgatgaataagattt 40021205  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  40021204 agttattataatt 40021192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 41282716 - 41282828
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  41282716 acatactatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 41282815  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  41282816 agttattataatt 41282828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 9507162 - 9507015
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnn 350  Q
    |||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  9507162 tcattttactgtttataagaatcatagtaacttttttttacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcaaaaaa-- 9507065  T
Q  351 ntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
      ||   ||||| |||||||||||||||||||||||||||||||||||||||    
T  9507064 --aaaaatatttcgttgacacttttgatgaataagatttagttattataatt 9507015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 252 - 402
Target Start/End: Complemental strand, 9515137 - 9514990
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnn 350  Q
    |||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  9515137 tcattttactgtttataagaatcatagtaacttttttttacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcaaaaaa-- 9515040  T
Q  351 ntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
      ||   ||||| |||||||||||||||||||||||||||||||||||||||    
T  9515039 --aaaaatatttcgttgacacttttgatgaataagatttagttattataatt 9514990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 14653966 - 14654077
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||         ||||||||||| |||||||||||||| |||||||||||    
T  14653966 acatattatcgtaaaaaataatcaaggttctcaattatgagtgataaaaattc-aaaaaaattaattttatttcgttgacacttttgacgaataagattt 14654064  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  14654065 agttattataatt 14654077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 29388799 - 29388990
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||||||||||||||         |||||| | |||| || |||||||||||||        |||||||||||||||||||||    
T  29388799 atatttatattttatagaacaacatttcataaaaaaaaacatcatttaattgttgataagaatcatagtaactttttttacatattatcgtaaaaaataa 29388898  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||||||| |||||||    
T  29388899 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttactataatt 29388990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 30349306 - 30349115
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  30349306 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 30349207  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||||||| ||||||||||||| |||||||||||||||||    
T  30349206 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacatttttgatgaataaaatttagttattataatt 30349115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 7862371 - 7862263
Alignment:
Q  294 attatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagtt 393  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||||||    
T  7862371 attatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagatttagtt 7862272  T
Q  394 attataatt 402  Q
    | |||||||    
T  7862271 actataatt 7862263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 40474059 - 40473947
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| | ||||||||| ||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  40474059 acatattatcataaaaaataatgaatgttctcgaatatgagtgaaaaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 40473960  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  40473959 agttattataatt 40473947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 33006523 - 33006412
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||         ||||||||||||||||||| |||| || ||||||||||    
T  33006523 acatattatcgtaaaaaataatgaatgttatcaattatgagcgataaaaattcaaaaaataataattttattttgttgacattttttataaataagattt 33006424  T
Q  390 agttattataat 401  Q
    ||||||||||||    
T  33006423 agttattataat 33006412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 35137741 - 35137549
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||| ||||||||||    
T  35137741 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatagtaaaaaata 35137642  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  |||||| |||||||| ||||||||||||||||||||||||||||||    
T  35137641 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaacttatttcgttgacacgtttgatgaataagatttagttattataatt 35137549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 42478911 - 42478800
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||         ||||||||||| ||||||||||||||||||||||||||    
T  42478911 acatattattgtaaaaaataatcaatgttctcaattacgagtgataaaaattcaaaaaaat-taattttatttcgttgacacttttgatgaataagattt 42478813  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  42478812 agttgttataatt 42478800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 1129233 - 1129424
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| |||| |||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  1129233 atatttatattttataaaacatcatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 1129332  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| || |||||||||||||||||         |||||| |||||||||||| |||||| ||||||||||||||||||||||||    
T  1129333 tgaatgttctcgatgatgagtgataaaaattcaaaaaataataatttcattttgttgacatttttgaagaataagatttagttattataatt 1129424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 401
Target Start/End: Complemental strand, 35501092 - 35500901
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        | |||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  35501092 atatttatattttatagaacaccatttcataagaaaaaacataatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 35500993  T
Q  311 taaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    | ||||||||||||||||||||||||||| ||           |||| | | ||||||||||||||||||||||||||||||||||||||||    
T  35500992 tgaatgttctcaattatgagtgataaaaatttaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 35500901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 54788579 - 54788469
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttag 391  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||||||          ||||||||||||||||||| |||| |||||||||||||||    
T  54788579 atattatcgtaaaaaataatgaatgttatcaattatgagcgataaaaatttaaaaaataataattttattttgttgacattttttatgaataagatttag 54788480  T
Q  392 ttattataatt 402  Q
    |||||||||||    
T  54788479 ttattataatt 54788469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 26457136 - 26457249
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||| |||  ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  26457136 acatattatcataaaaaaataacgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagatt 26457235  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  26457236 tagttattataatt 26457249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 40477982 - 40477869
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn-taattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||          ||||||||||||||||||| |||| ||||||||||||    
T  40477982 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaaatagtaattttattttgttgacattttttatgaataagatt 40477883  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  40477882 tagttattataatt 40477869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 24170155 - 24170043
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| |||| |||||| ||||||||| ||||||||||||||||||||         ||||||||||| ||||||| ||||||||||||| ||||    
T  24170155 acatattatcataaacaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttatttcgttgacatttttgatgaataaaattt 24170056  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  24170055 agttattataatt 24170043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 25834455 - 25834343
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         |||||||||| |||| ||| ||||||||||||||||||    
T  25834455 acatattatcataaaaaataatgaatgttctctattatgagtgataaaaattcaaaaaataataattttattctgttaacatttttgatgaataagattt 25834356  T
Q  390 agttattataatt 402  Q
    | |||||||||||    
T  25834355 aattattataatt 25834343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 29491863 - 29491755
Alignment:
Q  294 attatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagtt 393  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||| | ||||||| ||||||||||||||    
T  29491863 attatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgatatttttgattaataagatttagtt 29491764  T
Q  394 attataatt 402  Q
    |||||||||    
T  29491763 attataatt 29491755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 23456678 - 23456567
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||||||||||         ||||||||||||||||| | |||| |||||||||||||    
T  23456678 acatattatcgtaaaaaataataaatgttataaattatgagcaataaaaattcaaaaaataataattttattttgttgatattttttatgaataagattt 23456579  T
Q  390 agttattataat 401  Q
    ||||||||||||    
T  23456578 agttattataat 23456567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 36099388 - 36099277
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| |||||| ||||||||||| |||||||||||         ||||||||||||||||||| |||| | |||||||||||    
T  36099388 acatattatcataaaaaataatgaatgttatcaattatgagcgataaaaattcaaaaaataataattttattttgttgacattttttaagaataagattt 36099289  T
Q  390 agttattataat 401  Q
    ||||||||||||    
T  36099288 agttattataat 36099277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 46671563 - 46671452
Alignment:
Q  292 atattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||         |||||||| || ||||||||||||||||||||| |||||    
T  46671563 atattatcgtaaaaaaataatcaatgttctcaattatgggtgataaaaattcaaaaaatattaattttaattcgttgacacttttgatgaataatattta 46671464  T
Q  391 gttattataatt 402  Q
    ||||||||||||    
T  46671463 gttattataatt 46671452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 47746052 - 47745941
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||         |||||||||||  || |||||||||||||||||| |||    
T  47746052 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc-aaaaaaattaattttatttcattaacacttttgatgaataagtttt 47745954  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  47745953 agttgttataatt 47745941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 51344596 - 51344486
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||         ||||||||||||||||||| ||||||||||| ||||||    
T  51344596 acatattatcataaaaaataatgaatgttctcgattatgagtaataaaaattcaaaaaaa--taattttattttgttgacatttttgatgaatgagattt 51344499  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  51344498 agttattataatt 51344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 51756275 - 51756386
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||| |||||||||||||||| ||||||||| || |||||||||||||||||         ||||||||||| ||||| ||||||||||||||||||||    
T  51756275 acataatatcgtaaaaaataatcaatgttctccatcatgagtgataaaaattcaaaaaaat-taattttatttcgttgatacttttgatgaataagattt 51756373  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  51756374 agttattataatt 51756386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 53289334 - 53289525
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        | |||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  53289334 atatttatattttatagaacaacatttcataagaaaaaacattatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 53289433  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  |||||| ||||||||||||||| |||||||||||||||||||||||    
T  53289434 atgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgttgacacttttgat-aataagatttagttattataatt 53289525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 37127907 - 37128098
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  37127907 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaaatttttttacatattatcataaaaaataa 37128006  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||  |||||| |||||||||||          ||||||||||||||||||| |||| |||||||| |||||||||||||||||    
T  37128007 taaatgttctcggttatgaatgataaaaatttaaaaaataataattttattttgttgacattttttatgaataaaatttagttattataatt 37128098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 42622032 - 42622144
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||  ||||||| | ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  42622032 acatattatcataaaaaataacgaatgttcccgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 42622131  T
Q  390 agttattataatt 402  Q
    | | |||||||||    
T  42622132 aatcattataatt 42622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 341
Target Start/End: Complemental strand, 15997084 - 15996996
Alignment:
Q  253 cattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||||| |||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  15997084 cattttactgtttataagaatcatagtaactttttttacatattatcgtaaaaaataataaatattctcaattatgagtgatagaaatt 15996996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 25482438 - 25482490
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25482438 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 25482490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 32636929 - 32636739
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||| ||||        |||||| | ||||||| |||||||||||||        |||||||||| ||||||||||    
T  32636929 atatttatattttatagaacatcatttcgtaagaaaaaacatcatttcattgtttataagaatcatagtaattttttt-acatattatcataaaaaataa 32636831  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||  |||||||||||| |           |||||| || |||||||||||||||||||||||||||||||||||||||||    
T  32636830 tcaatgttctcaatcgtgagtgataaaattaaaaaaaaatataatttaatattgttgacacttttgatgaataagatttagttattataatt 32636739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 13756410 - 13756602
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | | ||||| |||||||||||||         |||||||||| ||||||| |    
T  13756410 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattatttataagaatcatagtaatttttttttacatattatcataaaaaaca 13756509  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||| ||||||||           ||  |||||| ||||||||||||||| |||||||||||||||||||||||    
T  13756510 atgaatgttctcaattatgagtgttaaaaattttaaaaaataaaaaattatttcgttgacacttttgataaataagatttagttattataatt 13756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 39253091 - 39253141
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39253091 taattttattttgttgacatttttgatgaataagatttagttattataatt 39253141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 39908667 - 39908779
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatt 388  Q
    ||||||||| |||||||| ||| || ||||||||||||| |||||||||||||         | |||||||||| ||||||| |||||||||||||||||    
T  39908667 acatattattgtaaaaaa-aatcaaagttctcaattatgggtgataaaaattcaaaataaaattaattttatttcgttgacaattttgatgaataagatt 39908765  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  39908766 tagttattataatt 39908779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 402
Target Start/End: Original strand, 46507535 - 46507644
Alignment:
Q  293 tattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagt 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||            ||  |||||| ||||||||||||||||||||||||||| |    
T  46507535 tattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttaat 46507634  T
Q  393 tattataatt 402  Q
    |||| |||||    
T  46507635 tattgtaatt 46507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 48825584 - 48825697
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaat-tttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||            ||  |||| |  |||||||||||||||||||||||||    
T  48825584 acatattatcgtaaaaaataataaatattctcaattatgagtaataaaaataaaataaaataaaaaatttaatccgttgacacttttgatgaataagatt 48825683  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  48825684 tagttattataatt 48825697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 7352417 - 7352462
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  7352417 ttatttcgttgacacttttgatgaataagatttagttattataatt 7352462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 39678323 - 39678212
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| | ||||||||| |||||||||||||||||||   |||||||          ||||||||||| ||||||||||||||| ||||||||||    
T  39678323 acatattatcatcaaaaataatcaatgttctcaattatgagtagaaaaaatt-ttaaaaaattaattttatttcgttgacacttttgataaataagattt 39678225  T
Q  390 agttattataatt 402  Q
    | |||||||||||    
T  39678224 aattattataatt 39678212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 39987590 - 39987635
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  39987590 ttatttcgttgacacttttgatgaataagatttagttattataatt 39987635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 44522184 - 44522136
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  44522184 taattttatttcgttaacacttttgatgaataagatttagttattataa 44522136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 54428723 - 54428609
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaatt--ttattttgttgacacttttgatgaataagat 387  Q
    |||||||||||||||||||||| || ||||||| |||||||||||||| |||          |||    ||||| ||||||| |||||||||||||||||    
T  54428723 acatattatcgtaaaaaataatgaacgttctcagttatgagtgataaatatttaaaaaaaaataaaaaattattctgttgacccttttgatgaataagat 54428624  T
Q  388 ttagttattataatt 402  Q
    |||||||||||||||    
T  54428623 ttagttattataatt 54428609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 10279190 - 10279240
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10279190 acatattatcgtaaaaa-taatgaatgttctcaattatgagtgataaaaatt 10279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 340
Target Start/End: Original strand, 48825503 - 48825634
Alignment:
Q  212 atatttatattttatagaacaacatttcataag-nnnnnnntcattttactgtttattagaatcatagtaa--nnnnnnnnacatattatcgtaaaaaat 308  Q
    |||||||||||||||||||||| ||||||||||        | || ||||||||||| ||||||||| |||          |||||||||||||||||||    
T  48825503 atatttatattttatagaacaatatttcataagaaaaaacattatattactgtttataagaatcataataactttttttttacatattatcgtaaaaaat 48825602  T
Q  309 aataaatgttctcaattatgagtgataaaaat 340  Q
    ||||||| ||||||||||||||| ||||||||    
T  48825603 aataaatattctcaattatgagtaataaaaat 48825634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 400
Target Start/End: Original strand, 37521615 - 37521720
Alignment:
Q  295 ttatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagtta 394  Q
    ||||||||||| ||||| ||| |||||||||||||||| |||||||||         ||||||||||||||| | | || ||| ||||||||||| ||||    
T  37521615 ttatcgtaaaatataatcaatattctcaattatgagtgctaaaaattcaaaaaaaattaattttattttgttaatatttctgacgaataagatttggtta 37521714  T
Q  395 ttataa 400  Q
    ||||||    
T  37521715 ttataa 37521720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 34825439 - 34825394
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  34825439 ttatttcgttgacacttttgatgaataaaatttagttattataatt 34825394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 50412251 - 50412303
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  50412251 acatattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattc 50412303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 44653333 - 44653290
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    |||||| ||| |||||||||||||||||||||||||||||||||    
T  44653333 ttatttcgttaacacttttgatgaataagatttagttattataa 44653290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 342
Target Start/End: Original strand, 35389475 - 35389525
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  35389475 atattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattc 35389525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 39987455 - 39987566
Alignment:
Q  212 atatttatattttatagaacaacatttcataag-nnnnnnntcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | | ||||| |||||||||||||        ||||||||| |||||||||||    
T  39987455 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattatttataagaatcatagtaattttttttacatattattgtaaaaaataa 39987554  T
Q  311 taaatgttctca 322  Q
    | ||||||||||    
T  39987555 tgaatgttctca 39987566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 15996977 - 15996932
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  15996977 ttatttcgttgacacttttgatgaataaaatttaattattataatt 15996932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 19914199 - 19914154
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||    
T  19914199 ttattttgtttacacttttgatgaataagatttaatcattataatt 19914154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 36220629 - 36220576
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||    
T  36220629 acatattatcgtaaaaaaataatcaatattctcaattatgattgataaaaattc 36220576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 40650227 - 40650178
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||| ||||| | |||||||||||||||||||||||    
T  40650227 aattttattgtgttgacatttttggtaaataagatttagttattataatt 40650178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 46959712 - 46959663
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||||| |||||||||||||||||||||||    
T  46959712 aattttattgcgttgacatttttgataaataagatttagttattataatt 46959663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 7352270 - 7352302
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  7352270 atatttatattttatagaacaacatttcataag 7352302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 8433652 - 8433600
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||| |||||||| ||||||||||| |||||| |||||||| |||||||||||    
T  8433652 acatgttatcgtataaaataataaaagttctctattatgagcgataaaaattc 8433600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 8966140 - 8966088
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  8966140 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 8966088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 338
Target Start/End: Original strand, 32945955 - 32946003
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaa 338  Q
    |||||||||||||||||||||||||| ||||| | ||||||| ||||||    
T  32945955 acatattatcgtaaaaaataataaatattctctactatgagtaataaaa 32946003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 35389544 - 35389576
Alignment:
Q  368 acacttttgatgaataagatttagttattataa 400  Q
    |||||||||||||||||||||||||||||||||    
T  35389544 acacttttgatgaataagatttagttattataa 35389576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 45635864 - 45635916
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  45635864 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 45635916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 50029934 - 50029986
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  50029934 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 50029986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 50412332 - 50412364
Alignment:
Q  368 acacttttgatgaataagatttagttattataa 400  Q
    |||||||||||||||||||||||||||||||||    
T  50412332 acacttttgatgaataagatttagttattataa 50412364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 52024680 - 52024724
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| ||||||||||||||||||||||| | |||||||||    
T  52024680 tattttgtttacacttttgatgaataagatttaatcattataatt 52024724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 7352352 - 7352402
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||||||    
T  7352352 acatattatcgtaaaaaataa-gaatgttcttaattatgaatgataaaaatt 7352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 34825570 - 34825539
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  34825570 atatttatattttatagaacaacatttcataa 34825539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 25482499 - 25482537
Alignment:
Q  364 gttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  25482499 gttgacacttttgatgaataaaatttaattattataatt 25482537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 29786843 - 29786892
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  29786843 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 29786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 29806179 - 29806130
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||| ||||| |||||| ||||||||||||| | |||||||||    
T  29806179 aattttattttattgacgcttttggtgaataagatttaatcattataatt 29806130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 44670504 - 44670553
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  44670504 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 44670553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 52058759 - 52058808
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| || |||||||||||| ||||||||||| || ||||||||    
T  52058759 aattttatttcgtcgacacttttgataaataagatttaatttttataatt 52058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 384
Target Start/End: Original strand, 4817254 - 4817282
Alignment:
Q  356 tttattttgttgacacttttgatgaataa 384  Q
    |||||||||||||||||||||||||||||    
T  4817254 tttattttgttgacacttttgatgaataa 4817282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 23796002 - 23795950
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||| || |||||||| || |||||| |||||||| |||||||||||    
T  23796002 acatattatcatataaaataatcaaagttctctattatgagcgataaaaattc 23795950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 25482355 - 25482387
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||| |||||||||||||||    
T  25482355 atatttatattttataggacaacatttcataag 25482387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 26457057 - 26457089
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  26457057 atatttatattttatagaacatcatttcataag 26457089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 42621952 - 42621984
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  42621952 atatttatattttatagaacatcatttcataag 42621984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 44379518 - 44379550
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  44379518 atatttatattttatagaacatcatttcataag 44379550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 44522293 - 44522261
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  44522293 atatttatattttatagaacatcatttcataag 44522261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 52162556 - 52162508
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||| ||||||  ||||||||||||||||||| | ||||||||    
T  52162556 aattttatttcgttgacgtttttgatgaataagatttaatcattataat 52162508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 31075712 - 31075904
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| ||||||||||        |||||||||||||||| |||||||||||||        | |||||||||||||||||||    
T  31075712 atatttatattttatagaacaatatttcataagaaaaaacatcattttactgtttataagaatcatagtaactttttttatatattatcgtaaaaaataa 31075811  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaatt-ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| ||||||||||||||||||||||||||          |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  31075812 taaattttctcaattatgagtgataaaaattcaaaaaaaaaaaattattatttcgttgacacttttgatgaataagatttagttattataatt 31075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 6329352 - 6329545
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        |||||||| ||||||| |||||||||||||        ||||||||| |||||||||||    
T  6329352 atatttatattttatagaacatcatttcataagaaaaaacatcattttattgtttataagaatcatagtaattatttttacatattattgtaaaaaataa 6329451  T
Q  311 taaatgttctcaattatgagtgataaaaattc--nnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||||||||||||||           ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  6329452 tcaatgttctcaattatgagtgataaaaattcaaaaaaaaacttaattttatttcgttgacacttttgatgaataaaatttagttattataatt 6329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 28624697 - 28624589
Alignment:
Q  294 attatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagtt 393  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||    
T  28624697 attatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattcaaaaaaaattaattttatttcgttgacacttttgatgaataagatttagtt 28624598  T
Q  394 attataatt 402  Q
    |||||||||    
T  28624597 attataatt 28624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 24003523 - 24003714
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||||||||||||||         |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  24003523 atatttatattttatagaacaacatttcataataaaaaacatcatttaattgtttataagaatcatagtaactctttttacatattatcgtaaaaaataa 24003622  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||| ||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  24003623 tgaatgttctcaattacgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 24003714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 30263686 - 30263875
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| ||||||||||        | |||||||| ||||| ||||| |||||||        |||||||||||||||||||||    
T  30263686 atatttatattttatagaacaatatttcataagaaaaaacattattttactatttataagaattatagtaactttttttacatattatcgtaaaaaataa 30263785  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||| |||||||||||||           || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  30263786 taaatgttctcaattataagtgataaaaatt--taaaaaaaaaaatttattttgttgacacttttgatgaataagatttaattattataatt 30263875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 30320994 - 30321185
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        ||||||||| |||||||||||    
T  30320994 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatagtaaaaaataa 30321093  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||| ||||||||||||||||||||||||||||||    
T  30321094 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacgtttgatgaataagatttagttattataatt 30321185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 400
Target Start/End: Original strand, 34038347 - 34038457
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||         ||||||||||| ||||||||||||||||||||||||||    
T  34038347 acatattatcataaaaaataatcaatgttctcaattatgagtgaaaaaaattcaaaaaaaaataattttatttcgttgacacttttgatgaataagattt 34038446  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  34038447 agttattataa 34038457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 35874121 - 35874233
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||    
T  35874121 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaatttaaaaaataataattttattttgttgacatttttgatgaataagattt 35874220  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  35874221 agttattataatt 35874233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 44263871 - 44263759
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||| || ||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  44263871 acatattatcgtaaaaaataattaatgttctcaattatgagcgaaaaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 44263772  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  44263771 agttattataatt 44263759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 51787568 - 51787762
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  51787568 atatttatattttatagaacaacatttcataagaaaaaacatcatttaa-tgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 51787666  T
Q  310 ataa---atgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||   ||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  51787667 ataataaatgttctcaattatgagtgataaaaattaaaaaaataataattttatttcgttgacacttttgatgaatcagatttagttattataatt 51787762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 12105343 - 12105454
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||         ||||||||||| ||||||||||||||||||||||||||    
T  12105343 acatattatcgtaaaaaataatcaatgttctcaattacgagtgataaaaattc-aaaaaaattaattttatttcgttgacacttttgatgaataagattt 12105441  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  12105442 agttgttataatt 12105454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 31530493 - 31530603
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||         ||||||||||||||||| |||||||||||||||||||||    
T  31530493 catattatagtaaaaaataatcaatgttctcaattatgaatgataaaaattcaaaaaaat-taattttattttgttgatacttttgatgaataagattta 31530591  T
Q  391 gttattataatt 402  Q
    ||||||||||||    
T  31530592 gttattataatt 31530603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 51056499 - 51056308
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  51056499 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 51056400  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||| ||||||||| ||||         ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  51056399 tgaatgttctcgattattagtgataaatattcaaaaaataataattttattttgttgacatttttgatgaataagatttagttattataatt 51056308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 9587866 - 9587755
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||         ||||||||||| |||||||||||||| |||||||||||    
T  9587866 acatattatcataaaaaataatcaatgttctcaattatgagtga-aaaaattcaaaaaaaattaattttatttcgttgacacttttgacgaataagattt 9587768  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  9587767 agttattataatt 9587755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 38261026 - 38260914
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||  ||||||||||||||||||||         ||||||||||||||||| | ||||||||||||||||||    
T  38261026 acatattatcataaaaaataatgaatgttcttgattatgagtgataaaaattcaaaaaataataattttattttgttgaaatttttgatgaataagattt 38260927  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  38260926 agttattataatt 38260914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 42275518 - 42275630
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||         ||||||||||| ||||||||||||||| ||||||||||    
T  42275518 acatattatcataaaaaataatcaatgttctcaattatgagtgaaaaaaattcaaaaaaaattaattttatttcgttgacacttttgataaataagattt 42275617  T
Q  390 agttattataatt 402  Q
    | |||||||||||    
T  42275618 aattattataatt 42275630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 48977058 - 48977170
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  48977058 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 48977157  T
Q  390 agttattataatt 402  Q
    |||||| ||||||    
T  48977158 agttatcataatt 48977170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 45622584 - 45622778
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn---acatattatcgtaaaaaa 307  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||           ||||||||||||||||||    
T  45622584 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttttacatattatcgtaaaaaa 45622683  T
Q  308 taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||| |||||||||||||||||||||||||||||           ||  |||||| ||||| |||||||||||||||||||||||||||||||||    
T  45622684 taatgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgatacttttgatgaataagatttagttattataatt 45622778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 52345781 - 52345895
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagat 387  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||         | |||||||||  ||||||||||||||||||||||||    
T  52345781 acatattatcgtaaaaaaataatcaatgttctcaattatgagtgataaaaattcaaaaaaatattaattttattacgttgacacttttgatgaataagat 52345880  T
Q  388 ttagttattataatt 402  Q
    |||||||||||||||    
T  52345881 ttagttattataatt 52345895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 52861401 - 52861592
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  52861401 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 52861500  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||  |||||||||           ||  | |||| |||||||||||||||||||||||||||||||||||||||    
T  52861501 tgaatgttctcaattatgagcaataaaaatttaaaaaaataaaaaatcatttcgttgacacttttgatgaataagatttagttattataatt 52861592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 6966211 - 6966081
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  6966211 atatttatattttatagaacagcatttcataagaaaaaatatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 6966112  T
Q  311 taaatgttctcaattatgagtgataaaaatt 341  Q
    | |||||||||||||||||||||||||||||    
T  6966111 tgaatgttctcaattatgagtgataaaaatt 6966081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 8396651 - 8396521
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  8396651 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 8396552  T
Q  311 taaatgttctcaattatgagtgataaaaatt 341  Q
    | |||||||||||||||||||||||||||||    
T  8396551 tgaatgttctcaattatgagtgataaaaatt 8396521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 30571232 - 30571121
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||||||    
T  30571232 acatattatcataacaaataatcaatgttctcaattatgagtgataaaaatt-taaaaaaattaattttatttcgttgacacttttgatgaataagattt 30571134  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  30571133 agttgttataatt 30571121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 32805957 - 32805845
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||           ||  |||||| ||||||||||||||||||||||||||    
T  32805957 acatattatcgtaaaaaataatgaatgttcttaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagattt 32805858  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  32805857 agttattataatt 32805845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 401
Target Start/End: Complemental strand, 47544599 - 47544407
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        | |||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  47544599 atatttatattttatagaacactatttcataagaaaaaacataatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 47544500  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  47544499 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 47544407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 52441261 - 52441370
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||| ||||    
T  52441261 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattc---aaaaaataattttattttgttgacatttttgatgaataaaattt 52441357  T
Q  390 agttattataatt 402  Q
    | |||||||||||    
T  52441358 aattattataatt 52441370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 46235055 - 46234946
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||         ||||||||||| ||| ||||||||||||||||||||||    
T  46235055 acatattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattcaaaaaaat-taattttatttcgttaacacttttgatgaataagattt 46234957  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  46234956 agttattataa 46234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 38718034 - 38717902
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn--acatattatcgtaaaaaat 308  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||          |||||||||||||||||||    
T  38718034 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaactttttttttacatattatcgtaaaaaat 38717935  T
Q  309 aataaatgttctcaattatgagtgataaaaatt 341  Q
    ||| |||||||||||||||||||||||||||||    
T  38717934 aatgaatgttctcaattatgagtgataaaaatt 38717902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 46362127 - 46362314
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  46362127 atatttatattttatagaacactatttcataagaaaaaatatcatttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaatataa 46362225  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | |||||||||||||||||||| |||||||||          ||  |||||| |||||||||||||||||||||||||||||||||||||    
T  46362226 tcaatgttctcaattatgagtgctaaaaattcaaaaaaaaa-aaaattatttcgttgacacttttgatgaataagatttagttattataa 46362314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 6526532 - 6526722
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||| ||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  6526532 atatttatattttatagaacatcatttcgtaagaaaaaacatcatttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaaaataa 6526630  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||  |||||||||||| |           |||||| || | |||||||||||||||||||||||||||||||||||||||    
T  6526631 tcaatgttctcaatcgtgagtgataaaattaaaaaaaaatataatttaatatcgttgacacttttgatgaataagatttagttattataatt 6526722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 24381542 - 24381429
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc-nnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||          ||||||||||| ||||| | ||||||||||||| |||    
T  24381542 acatattatcgtaaaaaataatcgatgttctcaatcatgagtgataaaaattcaaaaaaaaattaattttatttcgttgatatttttgatgaataaaatt 24381443  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  24381442 tagttattataatt 24381429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 31821764 - 31821877
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||           ||  |||||| |||| ||||||||||||||||||||    
T  31821764 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatttaaaaaaaataaaaaattatttcgttggcacttttgatgaataagatt 31821863  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  31821864 tagttattataatt 31821877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 48760404 - 48760274
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||| |||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  48760404 atatttatattttatagaataacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 48760305  T
Q  311 taaatgttctcaattatgagtgataaaaatt 341  Q
    | |||||| |||||||| |||||||||||||    
T  48760304 tgaatgttatcaattataagtgataaaaatt 48760274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 3399377 - 3399325
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3399377 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattc 3399325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 10348128 - 10348319
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||||||||||||||         |||||| | ||||||| |||||||||||||         ||||| ||| | ||||||||    
T  10348128 atatttatattttatagaacaacatttcataaaaaaaaacatcatttaattgtttataagaatcatagtaactttttttgcatatcatcatgaaaaataa 10348227  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||| || ||||||||||||||||||||           || ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  10348228 tgaatgtccttaattatgagtgataaaaattaaaaaaaaaaaaaatttatttcgttgacacgtttgatgaataagatttagttattataatt 10348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 47693423 - 47693372
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47693423 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaatt 47693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 24230753 - 24230866
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| ||| || || ||||||||||||||||||||         | |||||||||||||||||| ||||||||||||  |||    
T  24230753 acatattatcataaaaaataatgaattttgtcgattatgagtgataaaaattcaaaaaaatattaattttattttgttgacatttttgatgaatacaatt 24230852  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  24230853 tagttattataatt 24230866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 2249691 - 2249881
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||| |||         ||||||||||||||||||||    
T  2249691 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcataataacttttttttacatattatcgtaaaaaata 2249790  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | || |||||| |||||||| |||||||||||           || || |||| |||||||||||||||||||||||||||||||||||||||    
T  2249791 agaa-tgttcttaattatgaatgataaaaatttaaaaaataaaaaatt-atttcgttgacacttttgatgaataagatttagttattataatt 2249881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 21883029 - 21882918
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||||||||| |||| |||| |||||||||| ||| ||||||||||         | |||||||||| ||||||||||||||||||||| |||||    
T  21883029 atattatcgtaaaaattaatcaatgctctcaattattagtaataaaaattcaaaagaaaattaattttatttcgttgacacttttgatgaataatattta 21882930  T
Q  391 gttattataatt 402  Q
    |||||| |||||    
T  21882929 gttattttaatt 21882918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 14152871 - 14152918
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa 339  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  14152871 atattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaa 14152918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 313 - 402
Target Start/End: Complemental strand, 12907482 - 12907393
Alignment:
Q  313 aatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  12907482 aatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 12907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 25702701 - 25702751
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  25702701 taattttatttcgttgacacttttaatgaataagatttagttattataatt 25702751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 52180456 - 52180346
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||| || || |||||||||||||||||||           ||||  |||||||||||| ||||||||||||||||||    
T  52180456 acatattatcataaaaaataatgaattttgtcgattatgagtgataaaaattaaaaaaaaaaaaatt--attttgttgacatttttgatgaataagattt 52180359  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  52180358 agttattataatt 52180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 13203165 - 13203210
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  13203165 ttatttcgttgacacttttgatgaataagatttagttattataatt 13203210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 17553920 - 17554107
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        ||| || | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  17553920 atatttatattttatagaacaccatttcataagaaaaaaaatcagttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaatataa 17554018  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||| |||||||||||||||| |||||||||         || ||||||||  || | ||||||||||||||||||||| |||||||||    
T  17554019 tcaatattctcaattatgagtgctaaaaattc-aaaaaaattacttttatttcattaatacttttgatgaataagatttaattattataa 17554107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 402
Target Start/End: Original strand, 42958977 - 42959111
Alignment:
Q  261 tgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttat 360  Q
    ||||||| |||||||||||||        ||||||||||||| |||||||| || |||||| |||||||||||||||||||           ||  ||||    
T  42958977 tgtttataagaatcatagtaattttttttacatattatcgtataaaataatcaaagttctctattatgagtgataaaaatt-------ttaaaaaattat 42959069  T
Q  361 tttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||||||||||||||||||||||| | |||||||||    
T  42959070 tttgtttacacttttgatgaataagatttaatcattataatt 42959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 21072987 - 21072936
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  21072987 acatattatcataaaaaataatgaatattctcgattatgagtgataaaaatt 21072936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 7489179 - 7489217
Alignment:
Q  364 gttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  7489179 gttgacacttttgatgaataagatttagttgttataatt 7489217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 30896974 - 30896924
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||| |||| ||||||| |||||| |||||||||||    
T  30896974 taattttattttgttgacattttttatgaataggatttaattattataatt 30896924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 26307792 - 26307841
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||| || |||||||||| | |||||||||    
T  26307792 aattttattttgttgacacttttggtgtataagatttaatcattataatt 26307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 31401517 - 31401468
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||| || |||||||||||||||||||| | |||||||||    
T  31401517 aattttattttgtttacgcttttgatgaataagatttaatcattataatt 31401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 39190803 - 39190852
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||| ||||| | |||||||||||||||||||||||    
T  39190803 aattttattgtgttgacatttttggtaaataagatttagttattataatt 39190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 477684 - 477724
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttatta 397  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  477684 ttatttcgttaacacttttgatgaataagatttagttatta 477724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 8396505 - 8396461
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  8396505 tatttcgttgacatttttgatgaataaaatttagttattataatt 8396461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 13203040 - 13203072
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  13203040 atatttatattttatagaacaacatttcataag 13203072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 26102719 - 26102767
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||  ||||||  ||||||||||||||||||||||||||||||    
T  26102719 aattttattgcgttgacgattttgatgaataagatttagttattataat 26102767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 44382199 - 44382251
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  44382199 acatattatcgtataaaataatcaaagttctctattatgagagataaaaattc 44382251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 46641819 - 46641787
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  46641819 atatttatattttatagaacaacatttcataag 46641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 48796254 - 48796202
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  48796254 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 48796202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Complemental strand, 12907561 - 12907530
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  12907561 atatttatattttatagaacaacatttcataa 12907530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 31821675 - 31821706
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  31821675 atatttatattttatagaacaacatttcataa 31821706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 34100894 - 34100945
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  34100894 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 34100945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 45809667 - 45809616
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  45809667 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 45809616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 51610719 - 51610770
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  51610719 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 51610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 402
Target Start/End: Original strand, 14152953 - 14152983
Alignment:
Q  372 ttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||||    
T  14152953 ttttgatgaataagatttagttattataatt 14152983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 340
Target Start/End: Original strand, 26307726 - 26307776
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaat 340  Q
    ||||||||||||| |||||||| ||  ||||| ||||||||||||||||||    
T  26307726 acatattatcgtataaaataattaaatttctctattatgagtgataaaaat 26307776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 3399311 - 3399263
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||  |||||||||||||| ||||||| |||||||||||||||    
T  3399311 aattttatttctttgacacttttgattaataaga-ttagttattataatt 3399263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 24245663 - 24245749
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataaga 386  Q
    ||||||||||||| |||||||| || ||| || |||||||| |||||||||||          ||||||||||||||||| |||||| |||||||||    
T  24245663 acatattatcgtataaaataatcaaagttttccattatgagcgataaaaattc----------aattttattttgttgacgcttttggtgaataaga 24245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 31930944 - 31930993
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  31930944 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 31930993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 37498903 - 37498854
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  37498903 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 37498854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 38862343 - 38862294
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| |||||  |||||||| ||||||||||| |||||||||||    
T  38862343 aattttatttcgttgaagcttttgataaataagatttaattattataatt 38862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 45673475 - 45673426
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  45673475 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 45673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 46235135 - 46235102
Alignment:
Q  211 gatatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||| |||||||||||    
T  46235135 gatatttatattttatagaacatcatttcataag 46235102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 47693351 - 47693314
Alignment:
Q  365 ttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  47693351 ttgacacttttgacgaataagatttagttgttataatt 47693314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 51369477 - 51369428
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  51369477 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 51369428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 7227674 - 7227706
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  7227674 atatttatattttatagaacatcatttcataag 7227706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 368 - 400
Target Start/End: Original strand, 7227817 - 7227849
Alignment:
Q  368 acacttttgatgaataagatttagttattataa 400  Q
    |||||||||||||||||||||||||||| ||||    
T  7227817 acacttttgatgaataagatttagttataataa 7227849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 16482735 - 16482687
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||  ||||||  ||||| ||||||||||||||||||||||||    
T  16482735 aattttattgcgttgacgattttggtgaataagatttagttattataat 16482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 31084909 - 31084877
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||| ||||||||||    
T  31084909 atatttatattttatagaacaatatttcataag 31084877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 32144849 - 32144901
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||| ||||| |||||||| || |||||| |||||||| |||||||||||    
T  32144849 acatattttcgtataaaataatcaaagttctctattatgagcgataaaaattc 32144901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 46707528 - 46707580
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || ||| || |||||||| |||||||||||    
T  46707528 acatattatcgtataaaataatcaaagttttctattatgagcgataaaaattc 46707580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 48976979 - 48977011
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  48976979 atatttatattttatagaacatcatttcataag 48977011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 52303173 - 52303125
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    ||||||||| |||||||  ||||| | ||||||||||||||||||||||    
T  52303173 aattttattgtgttgacgtttttggtaaataagatttagttattataat 52303125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 52441181 - 52441213
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  52441181 atatttatattttatagaacatcatttcataag 52441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 212
Target Start/End: Complemental strand, 37714717 - 37714526
Alignment:
Q  21 aataccaacccacttaaaaacgagatgccacaggccactgaagatgccacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaaca 120  Q
    |||||||||||||||| | | ||||||||||| |||||  |||||| | || ||||||| || | ||||||| ||||||||| | ||||| |||||||||    
T  37714717 aataccaacccacttatatatgagatgccacaagccaccaaagatgtctcagcgcaaaatgaagggaaccgctgtctccgggttgccacagcctccaaca 37714618  T
Q  121 caaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgtttcgaaaaagtcgccaaacaaacactga 212  Q
    ||  |||| |||||||||||||| | | || |||||  |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  37714617 cagtcgtcgtcctcctgatgaagtatcatcttgcgaatcaaattgtcttttgttggcaatctgtttcgaagaagtcgccaaacaaacactga 37714526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 37676041 - 37676231
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataat 311  Q
    |||||||||||||||||||||||||||||||||       |||||| | ||||||| ||||||| |||||        ||||||||||||||||||||||    
T  37676041 atatttatattttatagaacaacatttcataagaaaaacatcatttaattgtttataagaatcaaagtaactttttttacatattatcgtaaaaaataat 37676140  T
Q  312 aaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||||||||||||||||||||||||           ||  ||||||  |||||||||||||||||||||||||||||| |||||||    
T  37676141 gaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttctttgacacttttgatgaataagatttagttactataatt 37676231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 44097698 - 44097839
Alignment:
Q  68 cacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaacacaaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatc 167  Q
    |||| ||||||| || |||||| |||||||||||||| ||||| ||||||||||||||||  || ||||| ||||||||| ||||||||  |||||| ||    
T  44097698 cacaccgcaaaatgaagtgaactgccgtctccgggctgccacatcctccaacacaaccgttgtcatcctggtgaagaaccatcctgcgaatcaaattgtc 44097797  T
Q  168 ttttgttggcactctgtttcgaaaaagtcgccaaacaaacac 209  Q
    ||||||||||| |||||||||||  ||||||||||| |||||    
T  44097798 ttttgttggcaatctgtttcgaaggagtcgccaaacgaacac 44097839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 36667538 - 36667347
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| |||||||||         |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  36667538 atatttatattttatagaacaatatttcataataaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 36667439  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  36667438 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 36667347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 45452568 - 45452681
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||    
T  45452568 acatattatcataaaaaaataatgaatgttctcaattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagatt 45452667  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  45452668 tagttattataatt 45452681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 2261257 - 2261145
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  2261257 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 2261158  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  2261157 agttattataatt 2261145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 34166093 - 34166201
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||         |||||||||||  ||||||||||||||||||||||||||    
T  34166093 catattatcgtaaaaaataatcaatgttctcaattatgggtgataaaaattcaaaaaatattaattttatttcattgacacttttgatgaataagattta 34166192  T
Q  391 gttattata 399  Q
    |||||||||    
T  34166193 gttattata 34166201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 40776801 - 40776913
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||          |||||||||||||||||| ||||||||||||||||||    
T  40776801 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataaaaattttattttgttgacatttttgatgaataagattt 40776900  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  40776901 agttattataatt 40776913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 5328903 - 5328711
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  5328903 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 5328804  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||| ||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  5328803 atgaatgttctcaattatgagtgatgaaaatttaaaaaagtaaaaaattatttggttgacacttttgatgaataagatttagttattataatt 5328711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 26988491 - 26988683
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||| ||||||||||||||||| ||||||||||        ||||||||||| |||| |||||||||||||        ||||||||| |||||||| ||    
T  26988491 atatgtatattttatagaacaatatttcataagaaaaaacatcattttactgcttatgagaatcatagtaactctttttacatattattgtaaaaaacaa 26988590  T
Q  311 taaatgttctcaattatgagtgataaaaattc-nnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||||||||||||||          ||||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  26988591 taaatgttctcaattatgagtgataaaaattcaaaaaaataataattttattccgttgacatttttgatgaataatatttagttattataatt 26988683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 1043362 - 1043171
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  1043362 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattgttttcacatattatcataaaaaataa 1043263  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| |||||| |||||||||||||         ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  1043262 tgaatgttctcgattatgtgtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattttgttattataatt 1043171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 6631013 - 6631200
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaataa 310  Q
    ||||||||||||||| ||||||||||||||||        | |||||| ||||||| ||||||||| |||         |||||||||||||||||||||    
T  6631013 atatttatattttatcgaacaacatttcataaaaaaaacattattttagtgtttataagaatcataataacttttttttacatattatcgtaaaaaataa 6631112  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||||||||||||||||          |||  ||||| |||| ||||||||||||||||||||||||||||||||||    
T  6631113 taaatgttctcaattatgagtgataaaaattcaaaaaa----aataatatttcgttgccacttttgatgaataagatttagttattataatt 6631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 254 - 402
Target Start/End: Complemental strand, 9497797 - 9497650
Alignment:
Q  254 attttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt 352  Q
    |||||||||||||| |||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||               
T  9497797 attttactgtttataagaatcatagtaacttttttttacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattaaaaaaaaaaa 9497698  T
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  9497697 aa--ttatttcgttgacacttttgatgaataagatttagttattataatt 9497650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 39646741 - 39646932
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  39646741 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaattttttttacatattatcgtaaaaaataa 39646840  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||| ||||||||||||||||||           ||  |||||| ||  |||||||||||||||||||||||||||||||||||    
T  39646841 ttaatgttctcagttatgagtgataaaaatttaaaaaaataaaaaattatttcgtgaacacttttgatgaataagatttagttattataatt 39646932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 41720551 - 41720360
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||| ||||||||||||||||        || ||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  41720551 atatttatattttataaaacaacatttcataagaaaaaacatcgtttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 41720452  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  41720451 tgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattattttgttgatacttttgatgaataagatttagttattataatt 41720360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 4214678 - 4214789
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| |||||| |||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  4214678 acatattatcataaaaa-taatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 4214776  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  4214777 agttattataatt 4214789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 9740618 - 9740801
Alignment:
Q  22 ataccaacccacttaaaaacgagatgccacaggccactgaagatgccacaacgcaaaaagaggtgaaccgccgtctccgggctaccacaacctccaacac 121  Q
    |||||| |||||||| ||| ||||||||||| ||| |  ||||||  ||| ||||||| ||||||||||||||||| | | || ||||||||||||||||    
T  9740618 ataccagcccacttataaatgagatgccacaagccgccaaagatgttacagcgcaaaatgaggtgaaccgccgtcttcagactgccacaacctccaacac 9740717  T
Q  122 aaccgtcatcctcctgatgaagaaccctcctgcgagacaaattatcttttgttggcactctgtttcgaaaaagtcgccaaacaaaca 208  Q
    |   ||  ||||| |||||||| ||||| || |||  |||||||||||||||||||| |   |||||||| ||||||||||||||||    
T  9740718 agttgttgtcctcatgatgaagtacccttctacgaagcaaattatcttttgttggcaat---tttcgaaagagtcgccaaacaaaca 9740801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 10706737 - 10706850
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    ||||||||| |||||||| |||| ||||||||||||||||  ||||||||||||         ||||||||||| |||||||||||||||||||||||||    
T  10706737 acatattattgtaaaaaaataatcaatgttctcaattatggatgataaaaattcaaaatatattaattttatttcgttgacacttttgatgaataagatt 10706836  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  10706837 tagttattataatt 10706850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 36162417 - 36162304
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||          ||||||||||  |||||||||||||||||||||||||    
T  36162417 acatattatcgtaaaaaaataatcaatgttctcaattatgggtgataaaaattaaaaaaatattaattttattacgttgacacttttgatgaataagatt 36162318  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  36162317 tagttattataatt 36162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 401
Target Start/End: Complemental strand, 118112 - 117920
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        | |||| | ||||||| || ||||||||||        |||||||||||||||||||||    
T  118112 atatttatattttatagaacaccatttcataagaaaaaacataatttaattgtttataagtatcatagtaactttttttacatattatcgtaaaaaataa 118013  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  118012 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 117920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 401
Target Start/End: Original strand, 7128194 - 7128386
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        | |||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  7128194 atatttatattttatagaacaccatttcataagaaaaaacataatttaattgtttataagaatcatagtaattttttttacatattatcgtaaaaaataa 7128293  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||| ||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  7128294 tgaatgttttcaattatgagtgataaaaatttaaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 7128386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 29265771 - 29265886
Alignment:
Q  290 acatattatcgtaaaaa--ataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataaga 386  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||         | |||||||||  |||||||||||||||||||||||    
T  29265771 acatattatcgtaaaaataataatcaatgttctcaattatgagtgataaaaattcaaaaaaatattaattttattacgttgacacttttgatgaataaga 29265870  T
Q  387 tttagttattataatt 402  Q
    ||||||||||||||||    
T  29265871 tttagttattataatt 29265886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 6982889 - 6983080
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||| || |||||||||    
T  6982889 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaatttttttttacatatt-tcctaaaaaata 6982987  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  6982988 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 6983080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 40267785 - 40267593
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||| ||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  40267785 atatttatatattatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 40267686  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || ||||||||||||||||||||||||||||            ||  |||||| ||||||||||||||||||||||||||| |||||||||||    
T  40267685 atgaatgttctcaattatgagtgataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttaattattataatt 40267593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 39300265 - 39300379
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaatt-atgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagat 387  Q
    |||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||         |||||||| || ||||||||||||||||||||||||    
T  39300265 acatattatcgtaaaaaaataatcaatgttctcaatttatgggtgataaaaattcaaaaaatattaattttaattcgttgacacttttgatgaataagat 39300364  T
Q  388 ttagttattataatt 402  Q
    |||||||||||||||    
T  39300365 ttagttattataatt 39300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 44541991 - 44542103
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| || |||||||| ||||||||||||||||||         | |||||||||| |||||||||||||||||||| ||||    
T  44541991 acatattatcataaaaaataatcaa-gttctcaactatgagtgataaaaattcaaaagaaaattaattttatttcgttgacacttttgatgaatatgatt 44542089  T
Q  389 tagttattataatt 402  Q
    ||||||||||||||    
T  44542090 tagttattataatt 44542103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 26522149 - 26522261
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||||           ||  |||||| ||||||||||||||||||||| ||||    
T  26522149 acatattatcgtaaaaaataatgaatgttttcaattataagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataaaattt 26522248  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  26522249 agttattataatt 26522261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 402
Target Start/End: Original strand, 38329635 - 38329744
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn-taattttattttgttgacacttttgatgaataagattta 390  Q
    |||||||||||||||||||| |||||| ||||| | |||||||||||||||          |||||  ||||||||||||||||||||||||||||||||    
T  38329635 atattatcgtaaaaaataatcaatgttttcaatcaagagtgataaaaattcaaaaaaaaaataatt--attttgttgacacttttgatgaataagattta 38329732  T
Q  391 gttattataatt 402  Q
    ||||||||||||    
T  38329733 gttattataatt 38329744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 400
Target Start/End: Original strand, 43842026 - 43842134
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttag 391  Q
    |||||||||||||| ||||| |||  ||||||||||||||| |||||||||         ||||||||||| ||| |||||||| |||||||||||||||    
T  43842026 atattatcgtaaaatataatcaataatctcaattatgagtgctaaaaattcaaaaaaaattaattttatttcgttaacacttttaatgaataagatttag 43842125  T
Q  392 ttattataa 400  Q
    |||||||||    
T  43842126 ttattataa 43842134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 15451636 - 15451742
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||||||||         |  |||| |||||||||||||||| |||||||| ||||    
T  15451636 acatattatcgtaaaaagtaataaatgttctcaattatgattaataaaaattc------aaattttttttttttgttgacacttttaatgaataaaattt 15451729  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  15451730 agttattataatt 15451742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 339
Target Start/End: Complemental strand, 38210622 - 38210493
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||| ||||||||||    
T  38210622 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatagtaaaaaata 38210523  T
Q  310 ataaatgttctcaattatgagtgataaaaa 339  Q
    || |||||||||||||||||||||||||||    
T  38210522 atgaatgttctcaattatgagtgataaaaa 38210493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 27847691 - 27847640
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27847691 acatattatcgtaaaaaataatgaatgttctcaattatgagtgataaaaatt 27847640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 402
Target Start/End: Original strand, 29454425 - 29454503
Alignment:
Q  324 ttatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29454425 ttatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagatttagttattataatt 29454503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 44000665 - 44000852
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        ||| || | ||||||| |||||||||||||        |||||||||| ||||| ||||    
T  44000665 atatttatattttatagaacatcatttcataagaaaaaacatcagttcattgtttataagaatcatagtaattttttt-acatattatcctaaaatataa 44000763  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||| |||||||||| ||||| |||||||||         ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  44000764 tcaatattctcaattacgagtgttaaaaattcaaaaaaat-taattttatttcgttaacacttttgatgaataatatttagttattataa 44000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 352 - 402
Target Start/End: Complemental strand, 45210450 - 45210400
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  45210450 taatttgatttcgttgacacttttgatgaataagatttagttattataatt 45210400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 35588103 - 35588058
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  35588103 ttattttgtttacacttttgatgaataagatttaattattataatt 35588058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 40578915 - 40578805
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||||||||||| || |||||| |||||||| |||||||||||           ||  |||||| ||||||||||||||||||||||||||    
T  40578915 acatattatcgtaaaaaataagaa-tgttcttaattatgaatgataaaaatt-taaaaaataaaaaattatttcgttgacacttttgatgaataagattt 40578818  T
Q  390 agttattataatt 402  Q
    | |||||||||||    
T  40578817 aattattataatt 40578805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 2749556 - 2749600
Alignment:
Q  356 tttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||    
T  2749556 tttatttcgttaacacttttgatgaataagatttagttattataa 2749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 12180147 - 12180096
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  12180147 acatattattgtaaaaaataatcaattttctctattatgagtgataaaaatt 12180096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 12424575 - 12424524
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  12424575 acatattattgtaaaaaataatcaattttctctattatgagtgataaaaatt 12424524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 281
Target Start/End: Original strand, 15451525 - 15451595
Alignment:
Q  212 atatttatattttatagaacaacatttcataag-nnnnnnntcattttactgtttattagaatcatagtaa 281  Q
    |||||||||||||||||||||| ||||||||||        |||||||||||||||| |||||||||||||    
T  15451525 atatttatattttatagaacaaaatttcataagaaaaaacatcattttactgtttataagaatcatagtaa 15451595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 23286725 - 23286676
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  23286725 aattttattgtgttgacgtttttgataaataagatttagttattataatt 23286676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 44935059 - 44935010
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  44935059 aattttattgtgttgacgtttttgataaataagatttagttattataatt 44935010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 27172138 - 27172086
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| |||||||| |||||||||||    
T  27172138 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaattc 27172086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 40578998 - 40578966
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  40578998 atatttatattttatagaacaacatttcataag 40578966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 24937768 - 24937819
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  24937768 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 24937819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 243
Target Start/End: Original strand, 26522070 - 26522101
Alignment:
Q  212 atatttatattttatagaacaacatttcataa 243  Q
    ||||||||||||||||||||||||||||||||    
T  26522070 atatttatattttatagaacaacatttcataa 26522101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 397
Target Start/End: Complemental strand, 34634020 - 34633981
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttatta 397  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  34634020 tatttcgttaacacttttgatgaataagatttagttatta 34633981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 4475205 - 4475156
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||| |||  ||||||| ||||||||||| |||||||||||    
T  4475205 aattttattttgtcgacgtttttgataaataagatttaattattataatt 4475156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 12163189 - 12163238
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  12163189 aattttattgcgttgacatttttggtaaataagatttagttattataatt 12163238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 12407617 - 12407666
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||  ||||||| ||||| | |||||||||||||||||||||||    
T  12407617 aattttattgcgttgacatttttggtaaataagatttagttattataatt 12407666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 24377471 - 24377422
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| ||| || |||||||||||||||||||| | |||||||||    
T  24377471 aattttatttcgtttacgcttttgatgaataagatttaatcattataatt 24377422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 29459794 - 29459745
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  29459794 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 29459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 29773605 - 29773556
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  29773605 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 29773556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 34520732 - 34520683
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||  | |||||||||||| ||||||||||| |||||||||||    
T  34520732 aattttatttcatcgacacttttgataaataagatttaattattataatt 34520683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 36002516 - 36002467
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  36002516 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 36002467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 2749419 - 2749451
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  2749419 atatttatattttatagaacatcatttcataag 2749451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 4214598 - 4214630
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  4214598 atatttatattttatagaacatcatttcataag 4214630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 15726136 - 15726184
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||  ||||||  ||||| ||||||||||||||||||||||||    
T  15726136 aattttattgcgttgacgattttggtgaataagatttagttattataat 15726184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 34166014 - 34166046
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  34166014 atatttatattttatagaacatcatttcataag 34166046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 243031 - 243181
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn 351  Q
    |||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  243031 tcattttactgtttataagaatcatagtaactttttttacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattccaaaaaaaa 243130  T
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||  | ||||| |||||||||||||||||||||||||||||||||||||||    
T  243131 tatatatatttcgttgacacttttgatgaataagatttagttattataatt 243181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 294 - 402
Target Start/End: Complemental strand, 22755461 - 22755353
Alignment:
Q  294 attatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagtt 393  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||    
T  22755461 attatcgtaaaaaataatcaatgttctcaattatgagtgataaaaattcaaaaaaaattaattttatttcgttgacacttttgatgaataagatttagtt 22755362  T
Q  394 attataatt 402  Q
    |||||||||    
T  22755361 attataatt 22755353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 3141144 - 3141335
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||  | ||||||| |||||||||||||        |||||||||||||||||||||    
T  3141144 atatttatattttatagaacaacatttcataagaaaaaacatcattagattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 3141243  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  3141244 ttaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 3141335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 4509733 - 4509542
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  4509733 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattatttttacatattatcataaaaaataa 4509634  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4509633 tgaatgttctcgattatgagtgataaaaattcaaaaaatagtaattttattttgttgacattttttatgaataagatttagttattataatt 4509542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 11763277 - 11763468
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        |||||| | ||||||| ||||| |||||||        |||||||||| ||||||||||    
T  11763277 atatttatattttatagaacattatttcataagaaaaaacatcatttcattgtttataagaattatagtaattttttttacatattatcataaaaaataa 11763376  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11763377 tgaatgttctctattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagatttagttattataatt 11763468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 9662060 - 9661866
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||||||||||||||    
T  9662060 atatttatattttatagaacaacatttcataagaaaaaacatcatttaa-tgtttataagaatcatagtaacttttttttacatattatcgtaaaaaata 9661962  T
Q  310 ataa---atgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||   ||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  9661961 ataataaatgttctcaattatgagtgataaaaattaaaaaaataataattttatttcgttgacacttttgatgaatcagatttagttattataatt 9661866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 18772091 - 18771992
Alignment:
Q  303 aaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  18772091 aaaaataatcaatgttctcaattatgagtgataaaaattcaaaaaaaattaattttattttgttgacacttttgatgattaagatttagttattgtaatt 18771992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 8310011 - 8310161
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn 351  Q
    |||||| | ||||||| |||||||||||||        |||||||||||||||||||||| |||||||| ||| |||||||||||||||||             
T  8310011 tcatttcattgtttataagaatcatagtaattttttttacatattatcgtaaaaaataatcaatgttcttaatcatgagtgataaaaattcaaaaaatat 8310110  T
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||||| | ||||||||||||||| |||||||||||||||||||||    
T  8310111 aaattttatttcgctgacacttttgatgagtaagatttagttattataatt 8310161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 2564949 - 2564838
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||         | |||||||||| |||||||||||||||||||||||||    
T  2564949 acatattatcataaaaaataatcaatgttctcaattatgagtgaaaaatattcaaaaaaagattaattttatttcgttgacacttttgatgaataagatt 2564850  T
Q  389 tagttattataa 400  Q
    ||||||||||||    
T  2564849 tagttattataa 2564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 4576608 - 4576499
Alignment:
Q  291 catattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||||||||| ||||| ||| ||||||| |||||||| |||||||||         ||||||||||| ||| |||||||||||||||||||||||    
T  4576608 catattatcgtaaaatataatcaatattctcaactatgagtgctaaaaattcaaaaaaaattaattttatttcgttaacacttttgatgaataagattta 4576509  T
Q  391 gttattataa 400  Q
    ||||||||||    
T  4576508 gttattataa 4576499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 33574222 - 33574110
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||| | ||||||||| ||||||||||||||||||||         ||||||||||||||||||| |||| |||||||||||||    
T  33574222 acatattatcataaaaaatattgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacattttttatgaataagattt 33574123  T
Q  390 agttattataatt 402  Q
    |  ||||||||||    
T  33574122 aaatattataatt 33574110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 400
Target Start/End: Complemental strand, 9687000 - 9686890
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||||||           || ||||||| ||| ||||||||||||||||||||||    
T  9687000 acatattatcgtaaaatataatcaatattctcaattatgagtgataaaaattaaaaaaaaaaaaaatttatttcgttaacacttttgatgaataagattt 9686901  T
Q  390 agttattataa 400  Q
    |||||||||||    
T  9686900 agttattataa 9686890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 1245122 - 1244930
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn--tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaat 308  Q
    |||||||||||| ||||||||||||||||||||         |||||| | ||||||| |||||||||||||         |||||||||||||||||||    
T  1245122 atatttatatttcatagaacaacatttcataagaaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatcgtaaaaaat 1245023  T
Q  309 aataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||| ||||||||||||||||| |||||||||||           ||  |||||| |||||||| ||||||||||||||||||||||||||||||    
T  1245022 aatgaatgttctcaattatga-tgataaaaatttaagaaaataaaaaattatttcgttgacacgtttgatgaataagatttagttattataatt 1244930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 23416720 - 23416608
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||||||           ||  |||||| ||||| ||||||||||||||||||||    
T  23416720 acatattatcgtaaaaaataatgaattttctcaattataagtgataaaaatttaaaaaaataaaaaattatttcgttgatacttttgatgaataagattt 23416621  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  23416620 agttattataatt 23416608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 26958620 - 26958520
Alignment:
Q  302 aaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataat 401  Q
    |||||||||| |||||| || ||||||| ||||||||||||         ||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  26958620 aaaaaataatgaatgttatcgattatgaatgataaaaattcaaaaaataataattttattttgttgacatttttaatgaataagatttaattattataat 26958521  T
Q  402 t 402  Q
    |    
T  26958520 t 26958520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 402
Target Start/End: Original strand, 528989 - 529091
Alignment:
Q  301 taaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn-taattttattttgttgacacttttgatgaataagatttagttattata 399  Q
    ||||||| ||| || ||||||||||||| |||||||||||||          ||||||||||| |||||| |||||||||||||||||||||||||||||    
T  528989 taaaaaaaaatcaaagttctcaattatgggtgataaaaattcaaaaaaataataattttatttcgttgacgcttttgatgaataagatttagttattata 529088  T
Q  400 att 402  Q
    |||    
T  529089 att 529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 8549799 - 8549844
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttatta 397  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8549799 taattttatttcgttaacacttttgatgaataagatttagttatta 8549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 364 - 402
Target Start/End: Original strand, 33574426 - 33574464
Alignment:
Q  364 gttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  33574426 gttgatacttttgatgaataagatttagttattataatt 33574464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 2259064 - 2259015
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||||| |||||||||||||||||||||||    
T  2259064 aattttattgtgttgacgtttttgataaataagatttagttattataatt 2259015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 29023858 - 29023903
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||    
T  29023858 ttattttgtttacacttttgatgaataagatttaatcattataatt 29023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 341
Target Start/End: Complemental strand, 12782900 - 12782820
Alignment:
Q  261 tgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||| |||||||||||||        ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  12782900 tgtttataagaatcatagtaattttttttacatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 12782820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 14779075 - 14779027
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||||||| |||  |||||||||| |||||||||||||||||||||    
T  14779075 taattttatttcgttaccacttttgattaataagatttagttattataa 14779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 33574337 - 33574369
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  33574337 atatttatattttatagaacaacatttcataag 33574369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 31644591 - 31644642
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  31644591 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 31644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 1339536 - 1339487
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| || |||||||||||| |||||||| || |||||||||||    
T  1339536 aattttatttcgtcgacacttttgataaataagatctaattattataatt 1339487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 6848670 - 6848621
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  6848670 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 6848621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 11446896 - 11446847
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||| || |||  ||||||||||||||||||| |||||||||||    
T  11446896 aattttatttcgtcgacgtttttgatgaataagatttaattattataatt 11446847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 17545764 - 17545715
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  17545764 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 17545715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 24487533 - 24487582
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  24487533 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 24487582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 31644651 - 31644696
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| ||| ||||||||||||||||||||||| | |||||||||    
T  31644651 ttatttcgtttacacttttgatgaataagatttaatcattataatt 31644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 32834020 - 32834069
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  32834020 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 32834069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 4576687 - 4576655
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  4576687 atatttatattttatagaacatcatttcataag 4576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 14779206 - 14779174
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  14779206 atatttatattttatagaacatcatttcataag 14779174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 26958693 - 26958661
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  26958693 atatttatattttatagaacatcatttcataag 26958661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 3602570 - 3602384
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||||||| ||||| |||||||||||||        | |||||||||||||||||||    
T  3602570 atatttatattttatagaacaacatttcataagaaaaaatatcattttactatttataagaatcatagtaactttttttatatattatcgtaaaaaataa 3602471  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||||||||||| ||||||||||||          ||  |||||| ||||||| |||||||||||||||||||||||||||||||    
T  3602470 taaatgttctcaattatgactgataaaaattcaaaaa-----aaaattatttcgttgacatttttgatgaataagatttagttattataatt 3602384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 15716208 - 15716017
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  15716208 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 15716109  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  |||||| ||||||| |||||||||||||||||||||||||||||||    
T  15716108 tgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacatttttgatgaataagatttagttattataatt 15716017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 398
Target Start/End: Original strand, 45232151 - 45232338
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        ||||||| |||||||| |||||||||||||        || ||||||||||||||||||    
T  45232151 atatttatattttatagaacaacatttcataagaaaaaacatcatttttctgtttataagaatcatagtaactttttt-acctattatcgtaaaaaataa 45232249  T
Q  311 taaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattat 398  Q
    ||||||||||||||||||||||||||||| ||          ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  45232250 taaatgttctcaattatgagtgataaaaatttaaaaaataaataattttatttcgttgacacttttgatgaataaaatttagttattat 45232338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 46575207 - 46575398
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  46575207 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttgtacatattatcgtaaaaaataa 46575306  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | || ||||||||||||||||||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  46575307 ttaacgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 46575398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 290 - 402
Target Start/End: Complemental strand, 1806705 - 1806593
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||    
T  1806705 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattcaaaaaataataattttattttgttgacatttttgatgaataagattt 1806606  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  1806605 agttattataatt 1806593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 24812384 - 24812193
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  24812384 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 24812285  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||| |||||||||            ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  24812284 tgaatgttctcaattatgagagataaaaatctaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 24812193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 17306705 - 17306894
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataat 311  Q
    ||||||||||||||||||||| |||||| ||||       |||||| | ||||||| |||||||||||||        ||||||||||||||||||||||    
T  17306705 atatttatattttatagaacatcatttcgtaagaaaaacatcatttcattgtttataagaatcatagtaattttttt-acatattatcgtaaaaaataat 17306803  T
Q  312 aaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||| ||  |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  17306804 caatgttcttaaccatgagtgataaaaattcaaaaaaaataaattttatttcgttgacacttttgatgaataagatttaattattataatt 17306894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 401
Target Start/End: Complemental strand, 18520221 - 18520029
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnntc-attttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        | |||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  18520221 atatttatattttatagaacaacatttcataagaaaaaacaccatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 18520122  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttatt--ttgttgacacttttgatgaataagatttagttattataat 401  Q
    | |||||||||||||||||||||||||||||           ||  |||||  ||||||||||||||||||||||||||||||||||||||||    
T  18520121 tgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcttgttgacacttttgatgaataagatttagttattataat 18520029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 26605239 - 26605350
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||          ||||||||||| ||||||||||||||||||||||||||    
T  26605239 acatattatcgtaaaaaataatcaatgttctcaattatgagtgataaaaatt-aaaaaaaattaattttatttcgttgacacttttgatgaataagattt 26605337  T
Q  390 agttattataatt 402  Q
    |||| ||||||||    
T  26605338 agttgttataatt 26605350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 290 - 401
Target Start/End: Complemental strand, 3214742 - 3214631
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||    
T  3214742 acatattatcataaaaaataatgaatgttctcaattatgagtgataaaaattttaagaataataattttattttgttgacatttttgatgaataagattt 3214643  T
Q  390 agttattataat 401  Q
    | ||||||||||    
T  3214642 aattattataat 3214631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 28264854 - 28265046
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||         ||||||||| ||||||||||    
T  28264854 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaacttttttttacatattatagtaaaaaata 28264953  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           || ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  28264954 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaatttatttcgttgacacgtttgatgaataagatttagttattataatt 28265046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 252 - 402
Target Start/End: Original strand, 7583153 - 7583303
Alignment:
Q  252 tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn 351  Q
    |||||| | ||||||| |||||||||||||        ||||||||| |||||||||||| |||||||||||||||||||||||||||||              
T  7583153 tcatttaattgtttataagaatcatagtaactttttttacatattatagtaaaaaataatgaatgttctcaattatgagtgataaaaatttaaaaaaata 7583252  T
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
     |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  7583253 aaattttatttcgttgacacgtttgatgaataagatttagttattataatt 7583303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 341
Target Start/End: Complemental strand, 30076943 - 30076813
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  30076943 atatttatattttatagaacaacatttcataagaaaaaatatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 30076844  T
Q  311 taaatgttctcaattatgagtgataaaaatt 341  Q
    | |||||||||||||||||||||||||||||    
T  30076843 tgaatgttctcaattatgagtgataaaaatt 30076813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 41047024 - 41047136
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||||||||||         | |||||||||  |||||||||||||||||||||||||    
T  41047024 acatattatcataaaaaataatcaatgttttcaattatgagtgataaaaattcaaaaaaaaattattttatttcattgacacttttgatgaataagattt 41047123  T
Q  390 agttattataatt 402  Q
    |||||||||||||    
T  41047124 agttattataatt 41047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 47369322 - 47369514
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||  | ||||||| |||||||||||||        ||||||||| |||||||||||    
T  47369322 atatttatattttatagaacaacatttcataagaaaaaacatcattagattgtttataagaatcatagtaactttttttacatattattgtaaaaaataa 47369421  T
Q  311 taaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||||||||||||||||||||||||||| ||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  47369422 tgaatgttctcaattatgagtgataaaaatttaaaaaaaataaaaaattatttcgttgacacttttgatgaataagatttagttattataatt 47369514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 35291430 - 35291619
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||  ||||||||||        ||| || | ||||||| |||||||||||||        |||||||||||||||| ||||    
T  35291430 atatttatattttatagaacataatttcataagaaaaaacatcagttcattgtttataagaatcatagtaattttttttacatattatcgtaaaatataa 35291529  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||| |||| ||||||||||| |||||||||         ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35291530 tcaatattcttaattatgagtgctaaaaattcaaaaaaaaataattttatttcgttaacacttttgatgaataagatttagttattataa 35291619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 402
Target Start/End: Complemental strand, 39558903 - 39558719
Alignment:
Q  218 atattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatg 316  Q
    |||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        ||| |||||||||||||||||| ||||    
T  39558903 atattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttaca-attatcgtaaaaaataatgaatg 39558805  T
Q  317 ttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||           ||  |||||| ||||||||||||||||||||| |||||||||||||||||    
T  39558804 ttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgttgacacttttgatgaataaaatttagttattataatt 39558719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 23110534 - 23110724
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||| |||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  23110534 atatttatattttatagaaaaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaactttttttacatattatcgtaaaaaataa 23110633  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | ||| |||||||||||||||||||||||||           ||  |||||| |||||||||||| ||||||||||||||| ||||||||||    
T  23110634 tgaatattctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcgttgacacttttaatgaataagatttag-tattataatt 23110724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 47642801 - 47642611
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||| ||||||||||        |||||  | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  47642801 atatttatattttatagaacaatatttcataagaaaaaatatcattcaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 47642702  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||||||||||||||           ||  ||||||| |||||||||||||||||||||| |||||||||||||||    
T  47642701 ttaatgttctcaattatgagtgataaaaatt-taaaaaataaaaaattattttattgacacttttgatgaataagacttagttattataatt 47642611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 24953030 - 24953222
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnn-acatattatcgtaaaaaata 309  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| ||||||||||||          ||||||||| | ||||||||    
T  24953030 atatttatattttatagaacaacatttcataagaaaaagcatcatttaattgtttataagaatcatagtatcttttttttacatattattggaaaaaata 24953129  T
Q  310 ataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    || |||||||||||||||||||||||||||||           ||  ||||||  ||||||||||||||||||||||||||||||||||||||    
T  24953130 atgaatgttctcaattatgagtgataaaaatttaaaaaaataaaaaattatttcattgacacttttgatgaataagatttagttattataatt 24953222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 5583106 - 5583156
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5583106 taattttattttgttgacacttttgatgaataagatttagttattataatt 5583156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 402
Target Start/End: Original strand, 11750523 - 11750716
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||||||||||||||||        |||||| | ||||||| |||||||||||||        |||||||||||||||||||||    
T  11750523 atatttatattttatagaacaacatttcataagaaaaaacatcatttaattgtttataagaatcatagtaaccttttttacatattatcgtaaaaaataa 11750622  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnnt--aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | | | ||||||||||||| |||||||||||          |  ||  |||||| ||||||||||||||||||||| ||||| |||||||||||    
T  11750623 tgattcttctcaattatgaatgataaaaattaaaaaaaaaattaaaaattatttcgttgacacttttgatgaataaaatttaattattataatt 11750716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 26413787 - 26413902
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc---nnnnnnnnntaattttattttgttgacacttttgatgaataaga 386  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||            ||||||||||||||||||| |||| ||||||||||    
T  26413787 acatattatcataaaaaataataaatgttctcgattatgagtgataaaaattcagaaaataataataattttattttgttgacatttttaatgaataaga 26413886  T
Q  387 tttagttattataatt 402  Q
     |||||||||| ||||    
T  26413887 cttagttattagaatt 26413902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 38665642 - 38665754
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa-ttcnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||           ||  |||||| |||||||||||||||||||||||||    
T  38665642 acatattatcgtaaaaaataatgaatgttctcaattataagtgataaaaatttaaaaaaaataaaaaattatttcgttgacacttttgatgaataagatt 38665741  T
Q  389 tagttattataat 401  Q
    |||||||||||||    
T  38665742 tagttattataat 38665754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 1269184 - 1269294
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||           ||  |||||| |||||||| |||||||||||||||||    
T  1269184 acatattattgtaaaaaataatgaatgttctcaattatgagtgataaaaattttaaaaaataaaaaattatttcgttgacac-tttgatgaataagattt 1269282  T
Q  390 agttattataat 401  Q
    ||||||||||||    
T  1269283 agttattataat 1269294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 400
Target Start/End: Complemental strand, 15954433 - 15954245
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        ||| || | ||||||| |||||||||||||        |||||||||| ||||| ||||    
T  15954433 atatttatattttatagaacatcatttcataagaaaaaacatcagttcattgtttataagaatcatagtaattttttt-acatattatcctaaaatataa 15954335  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||| ||||||||||| |||| |||||||||         ||||||||||| ||| | |||||| ||||||||||||||||||||||||    
T  15954334 tcaatattctcaattatcagtgctaaaaattcaaaaaaaattaattttatttcgttaatactttttatgaataagatttagttattataa 15954245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 402
Target Start/End: Original strand, 22967598 - 22967709
Alignment:
Q  292 atattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnnt-aattttattttgttgacacttttgatgaataagattta 390  Q
    ||||||||||||||| |||| |||| |||||||||| ||| ||||||||||         | |||||||||| ||||||||||||||||||||| |||||    
T  22967598 atattatcgtaaaaattaatcaatgctctcaattattagtaataaaaattcaaaagaaaattaattttatttcgttgacacttttgatgaataatattta 22967697  T
Q  391 gttattataatt 402  Q
    |||||| |||||    
T  22967698 gttattttaatt 22967709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 46291281 - 46291333
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  46291281 acatattatcgtaaaaaataatcaattttctcaattatgagtgataaaaattc 46291333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 212 - 400
Target Start/End: Complemental strand, 35358005 - 35357815
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    ||||||||||||||||||||| |||||||||||        ||| || | ||||||| |||||||||||||        |||||||||| ||||| ||||    
T  35358005 atatttatattttatagaacatcatttcataagaaaaaacatcagttcattgtttataagaatcatagtaattttttt-acatattatcctaaaatataa 35357907  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnn--taattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    | ||| |||||||||||||||| ||||||||            ||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35357906 tcaatattctcaattatgagtgctaaaaatttaaaaaaaaaattaattttatttcgttaacacttttgatgaataagatttagttattataa 35357815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 339
Target Start/End: Complemental strand, 21936743 - 21936694
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaa 339  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  21936743 acatattatcgtaaaaaataattaatgttctcaattataagtgataaaaa 21936694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 38666046 - 38666001
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  38666046 ttatttcgttgacacttttgatgaataagatttagttattataatt 38666001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 6791681 - 6791726
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttatta 397  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  6791681 taattttatttcgttaacacttttgatgaataagatttagttatta 6791726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 401
Target Start/End: Original strand, 15584722 - 15584833
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||| ||| |||||||| || |||||| |||||||||||| |||||||          |||||||||| |||||| |||||||||||||| ||||    
T  15584722 acatattattgtataaaataatcaaagttctctattatgagtgatcaaaattcaaaagaattcaattttatttcgttgacgcttttgatgaataaaattt 15584821  T
Q  390 agttattataat 401  Q
    | | ||||||||    
T  15584822 aatcattataat 15584833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 352 - 400
Target Start/End: Complemental strand, 31346817 - 31346769
Alignment:
Q  352 taattttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  31346817 taattttatttcgttaacacttttgatgaataagatttagttgttataa 31346769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 32529363 - 32529415
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||||||||| ||||| ||| |||||||||||||||| |||||||||    
T  32529363 acatattatcgtaaaatataatcaatattctcaattatgagtgctaaaaattc 32529415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 7574655 - 7574687
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  7574655 atatttatattttatagaacaacatttcataag 7574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 400
Target Start/End: Original strand, 37504727 - 37504841
Alignment:
Q  293 tattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnn---taattttattttgttgacacttttgatgaat----aag 385  Q
    ||||||||||||| ||||| || ||| ||||||||||||| |||||||||            ||||||||||||||| |||||||||||||||    |||    
T  37504727 tattatcgtaaaatataatcaaagttatcaattatgagtgctaaaaattcaaaaaaaaaaattaattttattttgttaacacttttgatgaataagaaag 37504826  T
Q  386 atttagttattataa 400  Q
    |||||||||||||||    
T  37504827 atttagttattataa 37504841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 38666172 - 38666140
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||||||||||||    
T  38666172 atatttatattttatagaacaacatttcataag 38666140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 41968671 - 41968711
Alignment:
Q  357 ttattttgttgacacttttgatgaataagatttagttatta 397  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  41968671 ttatttcgttaacacttttgatgaataagatttagttatta 41968711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 43631208 - 43631288
Alignment:
Q  261 tgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||| |||||||||||||        ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  43631208 tgtttataagaatcatagtaattttttttacatattatcgtataaaataattaaagttctctattatgagcgataaaaatt 43631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Original strand, 16087127 - 16087178
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  16087127 acatattatcgtataaaataatcaaagttctctattatgagcgataaaaatt 16087178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 29682263 - 29682212
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    ||||||||||||| |||||||| || |||||| |||||||| ||||||||||    
T  29682263 acatattatcgtataaaataattaaagttctctattatgagcgataaaaatt 29682212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 341
Target Start/End: Complemental strand, 30891507 - 30891456
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||||||||||||| ||||| || ||| ||||||||||||| ||||||||    
T  30891507 acatattatcgtaaaatataatcaaagttatcaattatgagtgctaaaaatt 30891456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 3910088 - 3910039
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  3910088 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 3910039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 8648282 - 8648331
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||| ||||| |||||| | ||||||||||| |||||||||||    
T  8648282 aattttattttattgacgcttttggtaaataagatttaattattataatt 8648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 21699538 - 21699587
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  21699538 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 21699587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 390
Target Start/End: Complemental strand, 30878538 - 30878439
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagattt 389  Q
    ||||||||||||| |||||||| || || ||| |||||||| |||||||||||          ||||||||||||||||| |||||| || |||||||||    
T  30878538 acatattatcgtataaaataatcaaagtactctattatgagcgataaaaattcaaaaaaatc-aattttattttgttgacgcttttggtgtataagattt 30878440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 41913341 - 41913390
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  41913341 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 41913390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 46291347 - 46291396
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||||   ||||||||||||| |||||||||| ||||||||||||    
T  46291347 aattttatttctctgacacttttgattaataagatttcgttattataatt 46291396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 1269112 - 1269144
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||| ||||||||||    
T  1269112 atatttatattttatagaacaatatttcataag 1269144  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 15591609 - 15591557
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaattc 342  Q
    ||||||||||||| |||||||| || |||||| ||||||||  ||||||||||    
T  15591609 acatattatcgtataaaataatcaaagttctctattatgagcaataaaaattc 15591557  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 30891438 - 30891394
Alignment:
Q  356 tttattttgttgacacttttgatgaataagatttagttattataa 400  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||||    
T  30891438 tttatttcgttaacacttttgaagaatgagatttagttattataa 30891394  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 38665561 - 38665593
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||| |||||||||||||    
T  38665561 atatttatattttatagaataacatttcataag 38665593  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 41046942 - 41046974
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    ||||||||||||||||||||| |||||||||||    
T  41046942 atatttatattttatagaacatcatttcataag 41046974  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 43631299 - 43631343
Alignment:
Q  358 tattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||| ||| ||||||||||||||||||||||| | |||||||||    
T  43631299 tatttcgtttacacttttgatgaataagatttaatcattataatt 43631343  T

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Target: scaffold0308 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 402
Target Start/End: Complemental strand, 7506 - 7324
Alignment:
Q  212 atatttatattttatagaacaacatttcataagnnnnnnn-tcattttactgtttattagaatcatagtaannnnnnnnacatattatcgtaaaaaataa 310  Q
    |||||||||||||||||||| ||||||||||||        |||||| | ||||||| ||||||||| |||        |||||||||||||||||||||    
T  7506 atatttatattttatagaaccacatttcataagaaaaaacatcatttaattgtttataagaatcataataactttttttacatattatcgtaaaaaataa 7407  T
Q  311 taaatgttctcaattatgagtgataaaaattcnnnnnnnnntaattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    | |||||||||||||||||  ||||||||||           ||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  7406 tgaatgttctcaattatgaaagataaaaattta---------aaaattatttcgttgacacttttgatgaataagatttagttattataatt 7324  T

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Target: scaffold0432 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 402
Target Start/End: Original strand, 3211 - 3324
Alignment:
Q  290 acatattatcgtaaaaaataataaatgttctcaattatgagtgataaaaatt-cnnnnnnnnntaattttattttgttgacacttttgatgaataagatt 388  Q
    |||||||||| ||||||||||| ||||||||| |||||||||||||||||||           ||||||||||||||||||| |||| ||||||||||||    
T  3211 acatattatcataaaaaataatgaatgttctcgattatgagtgataaaaattaaaaaaaaaaataattttattttgttgacattttttatgaataagatt 3310  T
Q  389 tagttattataatt 402  Q
    || |||||||||||    
T  3311 tatttattataatt 3324  T

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Target: scaffold0125 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 32451 - 32492
Alignment:
Q  360 ttttgttgacacttttgatgaataagatttagttattataat 401  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  32451 ttttgttgacacttttgatgaataagatttaattattataat 32492  T

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Target: scaffold0125; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 32395 - 32430
Alignment:
Q  306 aataataaatgttctcaattatgagtgataaaaatt 341  Q
    |||||| |||||||||||||||||||||||||||||    
T  32395 aataatgaatgttctcaattatgagtgataaaaatt 32430  T

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Target: scaffold0667 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 56 - 3
Alignment:
Q  290 acatattatcgtaaaaaa-taataaatgttctcaattatgagtgataaaaattc 342  Q
    |||||||||| ||||||| |||  ||||||||| ||||||||||||||||||||    
T  56 acatattatcataaaaaaataacgaatgttctcgattatgagtgataaaaattc 3  T

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Target: scaffold0077 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 48170 - 48121
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  48170 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 48121  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 36855 - 36904
Alignment:
Q  353 aattttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||||  ||||| | |||||||||||||||||||||||    
T  36855 aattttattgtgttgacgtttttggtaaataagatttagttattataatt 36904  T

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Target: scaffold1319 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 244
Target Start/End: Original strand, 147 - 179
Alignment:
Q  212 atatttatattttatagaacaacatttcataag 244  Q
    |||||||||||||||||||||||| ||||||||    
T  147 atatttatattttatagaacaacaattcataag 179  T

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Target: scaffold0628 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 6164 - 6116
Alignment:
Q  354 attttattttgttgacacttttgatgaataagatttagttattataatt 402  Q
    ||||||||| |||||  |||||| |||||||||||||||| ||||||||    
T  6164 attttatttcgttgatgcttttggtgaataagatttagtttttataatt 6116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 397
Target Start/End: Complemental strand, 34963 - 34927
Alignment:
Q  361 tttgttgacacttttgatgaataagatttagttatta 397  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  34963 tttgttgatacttttgatgaataaaatttagttatta 34927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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