View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15342_low_33 (Length: 312)
Name: NF15342_low_33
Description: NF15342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15342_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 16 - 296
Target Start/End: Original strand, 21400813 - 21401101
Alignment:
| Q |
16 |
agaaagttctctagtaattaccagtttttccaacatgttttgaatttcatgctggataaatagggaaaaggctcgatttctatctggaaacgaccccatc |
115 |
Q |
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| T |
21400813 |
agaaagttctctagtaattaccagtttttccaacatgttttgaatttcatgctggataaagagggaaaaggctcgatttctatctggaaacgaccccatc |
21400912 |
T |
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| Q |
116 |
atcaagattgtggatgttatcattgcataatcatcgttcaagccattaagaaacaatatagtagaatcttcattatcacatttcttcgaattcaccatgg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21400913 |
atcaagattgtggatgttatcattgcataatcatcgttcaagccattaagaaacaatatagtagaatcttcattatcacatttcttcgaattcaccatgg |
21401012 |
T |
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| Q |
216 |
cttcaca--------acaaaactaatgaatctacaattggaagatcatgacttcataatttaaaatatcatttcaatcaagtatttttt |
296 |
Q |
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||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21401013 |
cttaacaacacaaagacaaaactaatgaatctacaattggaagatcatgacttcataatttaaaatatcatttcaatcaagtatttttt |
21401101 |
T |
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