View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15342_low_35 (Length: 307)
Name: NF15342_low_35
Description: NF15342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15342_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 25 - 290
Target Start/End: Complemental strand, 40451826 - 40451561
Alignment:
| Q |
25 |
ccaacacttttattgctttcatgagcgaaataactacactgaacctaccttaactcaatatttgtttccattatatgaaagaaaataaaaacattacaat |
124 |
Q |
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| T |
40451826 |
ccaacacttttattgctttcataagcgaaataactacactgaacctaccttaactcaatatttgtttccattatatgaaagaaaataaaaacattacaat |
40451727 |
T |
|
| Q |
125 |
cactattcactagaaaacatgtgaactttattttacatatggttaaaaggtttactgtttaatcttcctcaatttctatctaacaacaggaaatatgtga |
224 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
40451726 |
cactattcactagaaaacatgtgaactttattttacatatggttaaaaggtttactgtttagtcttcctcaatttctatctaacaacaggaaatatgtga |
40451627 |
T |
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| Q |
225 |
acatttttgtctcattttcatataactgtatcccaattttatatagatatttatagaaaaatgtat |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
40451626 |
acatttttgtctcattttcatataactgtatcccaattttatatatatatttatagaaaaatgtat |
40451561 |
T |
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