View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15343_low_34 (Length: 219)

Name: NF15343_low_34
Description: NF15343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15343_low_34
NF15343_low_34
[»] chr1 (25 HSPs)
chr1 (1-219)||(38065633-38065852)
chr1 (1-79)||(11202200-11202280)
chr1 (1-98)||(18542268-18542367)
chr1 (1-50)||(13698321-13698370)
chr1 (1-50)||(16834421-16834470)
chr1 (1-79)||(17825849-17825930)
chr1 (1-50)||(32186307-32186356)
chr1 (1-79)||(11201923-11202004)
chr1 (1-50)||(9033612-9033661)
chr1 (1-98)||(49217000-49217099)
chr1 (1-79)||(52869933-52870015)
chr1 (1-50)||(11706777-11706827)
chr1 (1-50)||(16798242-16798292)
chr1 (1-50)||(26190000-26190050)
chr1 (1-79)||(45217781-45217862)
chr1 (1-79)||(48721507-48721588)
chr1 (1-50)||(49204233-49204283)
chr1 (1-50)||(50642860-50642910)
chr1 (1-50)||(9681018-9681067)
chr1 (1-49)||(10613838-10613887)
chr1 (1-50)||(13158821-13158870)
chr1 (1-79)||(38064785-38064866)
chr1 (1-50)||(42432167-42432216)
chr1 (1-50)||(52579699-52579748)
chr1 (29-97)||(35155088-35155158)
[»] chr7 (40 HSPs)
chr7 (1-98)||(45856489-45856588)
chr7 (1-98)||(22022987-22023085)
chr7 (1-79)||(30023247-30023328)
chr7 (2-79)||(30022481-30022561)
chr7 (1-98)||(44471845-44471943)
chr7 (1-79)||(44157364-44157445)
chr7 (1-50)||(9495693-9495742)
chr7 (1-79)||(17775301-17775382)
chr7 (1-50)||(33227724-33227773)
chr7 (1-98)||(40524588-40524687)
chr7 (1-98)||(45258924-45259024)
chr7 (1-52)||(27316228-27316280)
chr7 (3-86)||(21387236-21387322)
chr7 (1-50)||(9491286-9491336)
chr7 (1-98)||(15753309-15753411)
chr7 (14-91)||(31308252-31308330)
chr7 (1-98)||(33228573-33228674)
chr7 (1-50)||(21366298-21366347)
chr7 (1-50)||(33210314-33210363)
chr7 (1-50)||(43671639-43671688)
chr7 (1-50)||(48343624-48343673)
chr7 (1-79)||(35498645-35498727)
chr7 (1-50)||(14312947-14312997)
chr7 (1-50)||(26244536-26244586)
chr7 (1-50)||(38449861-38449911)
chr7 (1-91)||(43775552-43775646)
chr7 (1-98)||(48611280-48611381)
chr7 (1-50)||(1486681-1486730)
chr7 (1-50)||(2750334-2750383)
chr7 (1-50)||(21366936-21366985)
chr7 (1-50)||(24181932-24181981)
chr7 (1-50)||(34959148-34959196)
chr7 (1-50)||(36900756-36900805)
chr7 (1-50)||(38184229-38184278)
chr7 (1-80)||(39880764-39880845)
chr7 (1-50)||(42260738-42260787)
chr7 (1-98)||(44472820-44472921)
chr7 (1-50)||(48937195-48937243)
chr7 (1-44)||(15752283-15752327)
chr7 (1-86)||(23678870-23678958)
[»] chr4 (46 HSPs)
chr4 (1-98)||(17214941-17215040)
chr4 (1-80)||(31891892-31891973)
chr4 (1-80)||(21858473-21858555)
chr4 (1-80)||(21914336-21914418)
chr4 (1-98)||(24791496-24791597)
chr4 (1-98)||(24816664-24816765)
chr4 (1-50)||(38350385-38350434)
chr4 (1-50)||(41904030-41904079)
chr4 (1-98)||(53139958-53140059)
chr4 (1-48)||(23395886-23395933)
chr4 (1-50)||(6508467-6508517)
chr4 (1-79)||(24792509-24792590)
chr4 (1-80)||(42259303-42259385)
chr4 (1-91)||(56279779-56279872)
chr4 (1-50)||(25706092-25706141)
chr4 (1-50)||(41610596-41610645)
chr4 (1-50)||(55082489-55082538)
chr4 (1-52)||(6521173-6521224)
chr4 (1-79)||(29798139-29798218)
chr4 (1-91)||(36112227-36112321)
chr4 (1-103)||(37302372-37302478)
chr4 (1-79)||(40033349-40033431)
chr4 (1-80)||(42342594-42342676)
chr4 (1-50)||(21310872-21310922)
chr4 (1-79)||(26171702-26171783)
chr4 (1-50)||(38035780-38035830)
chr4 (1-79)||(51110073-51110154)
chr4 (1-50)||(54283382-54283432)
chr4 (1-50)||(56444208-56444258)
chr4 (1-50)||(1861430-1861479)
chr4 (1-50)||(4630884-4630933)
chr4 (1-50)||(6077526-6077575)
chr4 (1-50)||(7389417-7389466)
chr4 (1-50)||(22524356-22524405)
chr4 (1-50)||(23520082-23520130)
chr4 (1-79)||(38575566-38575647)
chr4 (1-50)||(39334406-39334454)
chr4 (1-50)||(39633587-39633636)
chr4 (1-50)||(42341751-42341800)
chr4 (1-50)||(44097713-44097762)
chr4 (1-50)||(54445560-54445609)
chr4 (1-50)||(55083490-55083539)
chr4 (1-79)||(9360525-9360605)
chr4 (1-79)||(19538473-19538553)
chr4 (1-69)||(26762430-26762498)
chr4 (1-49)||(40034361-40034409)
[»] scaffold0083 (1 HSPs)
scaffold0083 (1-50)||(3283-3332)
[»] chr8 (40 HSPs)
chr8 (1-58)||(23564709-23564766)
chr8 (1-80)||(3416691-3416772)
chr8 (1-91)||(23563892-23563984)
chr8 (1-50)||(25094186-25094235)
chr8 (1-80)||(32448966-32449046)
chr8 (1-79)||(11179978-11180058)
chr8 (1-80)||(29732736-29732818)
chr8 (1-50)||(44869132-44869182)
chr8 (1-50)||(12503168-12503217)
chr8 (1-50)||(14598517-14598566)
chr8 (1-50)||(20832791-20832840)
chr8 (1-79)||(26431570-26431651)
chr8 (1-79)||(37007176-37007256)
chr8 (1-56)||(39584593-39584649)
chr8 (1-52)||(44458631-44458681)
chr8 (1-52)||(44466164-44466214)
chr8 (1-50)||(6870072-6870122)
chr8 (1-79)||(12765085-12765166)
chr8 (1-50)||(15730554-15730604)
chr8 (1-79)||(17733912-17733993)
chr8 (1-55)||(32449452-32449506)
chr8 (1-50)||(36468910-36468960)
chr8 (1-50)||(39132790-39132840)
chr8 (1-98)||(39864199-39864297)
chr8 (1-79)||(44445556-44445637)
chr8 (1-50)||(355231-355280)
chr8 (1-91)||(2456327-2456419)
chr8 (1-50)||(21559813-21559862)
chr8 (1-50)||(27576009-27576058)
chr8 (1-50)||(41393564-41393613)
chr8 (1-50)||(41574989-41575038)
chr8 (1-50)||(42355604-42355653)
chr8 (1-50)||(42993842-42993891)
chr8 (1-50)||(44671043-44671092)
chr8 (1-91)||(9116236-9116331)
chr8 (19-79)||(10970421-10970484)
chr8 (1-79)||(10999500-10999580)
chr8 (1-49)||(12502151-12502199)
chr8 (1-37)||(31819787-31819823)
chr8 (3-98)||(41449958-41450053)
[»] chr3 (37 HSPs)
chr3 (4-98)||(19239933-19240030)
chr3 (1-91)||(40512349-40512443)
chr3 (1-50)||(21414756-21414805)
chr3 (1-50)||(35235924-35235973)
chr3 (1-79)||(45149812-45149892)
chr3 (1-52)||(2444394-2444445)
chr3 (1-91)||(20819232-20819325)
chr3 (1-50)||(7579864-7579913)
chr3 (1-49)||(22846929-22846978)
chr3 (1-50)||(35547016-35547065)
chr3 (1-50)||(38667169-38667218)
chr3 (1-79)||(40010156-40010239)
chr3 (1-52)||(4490384-4490436)
chr3 (1-79)||(21414313-21414393)
chr3 (1-79)||(27656276-27656356)
chr3 (1-79)||(49255675-49255755)
chr3 (1-79)||(6779911-6779990)
chr3 (1-79)||(19961537-19961619)
chr3 (1-98)||(41222668-41222767)
chr3 (1-50)||(11652909-11652959)
chr3 (1-50)||(18073918-18073968)
chr3 (1-86)||(25555482-25555571)
chr3 (1-50)||(35233794-35233844)
chr3 (1-50)||(37090486-37090536)
chr3 (1-50)||(40278160-40278210)
chr3 (1-50)||(49527952-49528002)
chr3 (1-80)||(55482353-55482435)
chr3 (1-50)||(35153949-35153998)
chr3 (1-79)||(40791373-40791454)
chr3 (1-50)||(42856785-42856834)
chr3 (1-50)||(43353589-43353638)
chr3 (1-79)||(45257856-45257937)
chr3 (1-50)||(45712467-45712516)
chr3 (1-50)||(45970729-45970778)
chr3 (1-50)||(53628221-53628270)
chr3 (1-79)||(54800088-54800169)
chr3 (1-80)||(31584706-31584789)
[»] chr5 (38 HSPs)
chr5 (1-52)||(11158012-11158063)
chr5 (1-79)||(5576372-5576453)
chr5 (1-50)||(25823737-25823786)
chr5 (1-91)||(26662259-26662352)
chr5 (1-91)||(26933854-26933947)
chr5 (1-50)||(27188729-27188778)
chr5 (1-79)||(6914152-6914232)
chr5 (5-79)||(36778243-36778319)
chr5 (1-79)||(40988889-40988969)
chr5 (1-81)||(21085766-21085849)
chr5 (1-50)||(11665655-11665705)
chr5 (1-50)||(746395-746444)
chr5 (1-50)||(4103982-4104031)
chr5 (1-91)||(5790517-5790610)
chr5 (1-50)||(38978424-38978473)
chr5 (1-79)||(5577376-5577456)
chr5 (1-69)||(9670600-9670668)
chr5 (3-50)||(18145730-18145777)
chr5 (1-50)||(9587565-9587615)
chr5 (1-50)||(9673312-9673362)
chr5 (1-47)||(11665013-11665058)
chr5 (1-79)||(25752942-25753023)
chr5 (1-79)||(29235477-29235558)
chr5 (1-80)||(29236201-29236283)
chr5 (1-50)||(747517-747566)
chr5 (1-50)||(1830169-1830218)
chr5 (1-50)||(2060639-2060688)
chr5 (1-79)||(6809483-6809564)
chr5 (1-50)||(7482995-7483044)
chr5 (1-50)||(10622796-10622845)
chr5 (1-50)||(12404338-12404387)
chr5 (1-50)||(13544613-13544662)
chr5 (1-50)||(27500926-27500975)
chr5 (5-79)||(34217309-34217386)
chr5 (1-50)||(36499221-36499270)
chr5 (1-50)||(40315636-40315685)
chr5 (1-52)||(11157000-11157052)
chr5 (1-91)||(17648368-17648463)
[»] chr2 (31 HSPs)
chr2 (1-79)||(4647042-4647121)
chr2 (1-98)||(39939281-39939380)
chr2 (1-52)||(7337831-7337882)
chr2 (1-50)||(20463680-20463730)
chr2 (1-79)||(34926052-34926133)
chr2 (1-50)||(3768388-3768436)
chr2 (1-79)||(9708962-9709043)
chr2 (1-50)||(10315254-10315303)
chr2 (1-50)||(36208114-36208163)
chr2 (1-79)||(44746973-44747053)
chr2 (30-83)||(27693873-27693928)
chr2 (1-80)||(3362714-3362796)
chr2 (1-79)||(3364046-3364127)
chr2 (1-79)||(5607542-5607623)
chr2 (1-50)||(6924394-6924444)
chr2 (1-50)||(8306751-8306801)
chr2 (1-50)||(28780369-28780419)
chr2 (1-50)||(2694928-2694976)
chr2 (1-80)||(3434465-3434546)
chr2 (1-50)||(5438073-5438122)
chr2 (1-50)||(5606847-5606896)
chr2 (1-79)||(6731396-6731477)
chr2 (1-50)||(8307444-8307493)
chr2 (1-50)||(9758340-9758389)
chr2 (1-50)||(11871379-11871427)
chr2 (1-50)||(25991918-25991967)
chr2 (1-50)||(29366551-29366600)
chr2 (1-52)||(7275620-7275672)
chr2 (1-79)||(14251884-14251964)
chr2 (1-49)||(20207085-20207133)
chr2 (1-52)||(41425467-41425519)
[»] chr6 (12 HSPs)
chr6 (1-79)||(17336555-17336636)
chr6 (1-98)||(1562900-1563002)
chr6 (1-50)||(32596372-32596421)
chr6 (1-50)||(11957030-11957080)
chr6 (1-50)||(23067621-23067671)
chr6 (1-50)||(1798569-1798618)
chr6 (1-50)||(5339925-5339974)
chr6 (1-50)||(8748766-8748815)
chr6 (1-50)||(13209850-13209899)
chr6 (17-50)||(17335063-17335096)
chr6 (1-44)||(1563984-1564028)
chr6 (1-52)||(3788746-3788798)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-79)||(2379-2459)
[»] scaffold0140 (2 HSPs)
scaffold0140 (1-80)||(4393-4476)
scaffold0140 (1-50)||(5225-5275)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-79)||(94271-94352)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-50)||(831-880)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-50)||(59427-59476)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-50)||(38202-38251)
scaffold0004 (1-50)||(130937-130986)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-52)||(119169-119221)
scaffold0022 (1-52)||(120118-120169)
[»] scaffold1063 (1 HSPs)
scaffold1063 (1-50)||(309-359)
[»] scaffold0474 (1 HSPs)
scaffold0474 (1-50)||(13158-13207)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-50)||(12891-12940)
[»] scaffold0219 (1 HSPs)
scaffold0219 (1-50)||(22183-22232)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-49)||(46565-46614)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-50)||(42506-42555)


Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 38065633 - 38065852
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaag-agtaattgac-aaacttacaattttggagggtaattacctatt 98  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||| ||| | |||||||| ||||||||||||||| || ||||||||| |||    
T  38065633 aaattgattaatgttgtgcaatttcatgagctaattgaagttttgttaatgtcaaggactaattgacgaaacttacaattttg-agagtaattacccatt 38065731  T
Q  99 gagtctcttacctatttactcgtgaattcccgaaagaatgaaagcctttataaatctaacaaactatacatctcactattaccttattttcacggcactt 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38065732 gagtctcttacctatttattcgtgaattcccgaaagaatgaaagcctttataaatctaacaaactatacatctcactattaccttattttcacggcactt 38065831  T
Q  199 attcatgttaagactaaatta 219  Q
    |||||||||||||||||||||    
T  38065832 attcatgttaagactaaatta 38065852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11202200 - 11202280
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattt 79  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||| | ||| | |||||||| |||||||||||||    
T  11202200 aaattgatcaacgttgtgcaatttcatagggtaattgaagttttgttaatttcaagggataattgacaaaacttacaattt 11202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 18542268 - 18542367
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattttggagggtaattacctatt 98  Q
    ||||||||||| ||||| |||||||||  ||||||| ||||||||||||||| |  | ||||||||| |||||||||||||| | |||||||| ||||||    
T  18542268 aaattgattaacgttgtacaatttcatggggtaattaaagttttgttaatgtcagggggtaattgacgaaacttacaattttagggggtaattgcctatt 18542367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13698321 - 13698370
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  13698321 aaattgattaacattgtgcaatttcagaaggtaattgaagttttgttaat 13698370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16834470 - 16834421
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  16834470 aaattgattaacgttgtgcaatttcatggggtaattgaagttttgttaat 16834421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17825930 - 17825849
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatg-taaagagtaattgac-aaacttacaattt 79  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||||  | ||| |||||||| |||||||||||||    
T  17825930 aaattgattaatgttgtgcaatttcagaaggataattgaaattttgttaatgccagagattaattgacgaaacttacaattt 17825849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32186307 - 32186356
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||||    
T  32186307 aaattgattaacgttgtgcaatttcagagggtaattgaagttttgttaat 32186356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11202004 - 11201923
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | ||  | ||||||||| |||||||||||||    
T  11202004 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaatttcaagggggtaattgacgaaacttacaattt 11201923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9033661 - 9033612
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  9033661 aaattgattaacgttatgcaatttcatggggtaattgaagttttgttaat 9033612  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 49217000 - 49217099
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattttggagggtaattacctatt 98  Q
    ||||||||||| |||||| ||||||||  | ||||||||||||||||||| | |  | ||||||||| |||||||||||||  ||||| |||| ||||||    
T  49217000 aaattgattaacgttgtgaaatttcatgggataattgaagttttgttaatttcagtgggtaattgacgaaacttacaatttcagaggggaattgcctatt 49217099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 52870015 - 52869933
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||||||| | ||  | ||||||||| |||||||||||||    
T  52870015 aaattgattaacgttgtgcaatttcataggggtaattgacgttttgttaatttcaagggggtaattgacgaaacttacaattt 52869933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11706827 - 11706777
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||||||| |||||||||| |  |||||||||||||||||||||    
T  11706827 aaattgattaatgttatgcaatttcagtggggtaattgaagttttgttaat 11706777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16798242 - 16798292
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  16798242 aaattgattaacgttgtgcaatttcagaggggtaattgaagttttgttaat 16798292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26190000 - 26190050
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||||    
T  26190000 aaattgattaacgttgtgcaatttcagggaggtaattgaagttttgttaat 26190050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45217781 - 45217862
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||| | ||  | ||||||||| |||||||||||||    
T  45217781 aaattgattaacgttttgcaatttcagggggtaattgaagttttgttaatttcaatggggtaattgacgaaacttacaattt 45217862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48721507 - 48721588
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||| ||||||||||| | ||  | ||||||||| |||||||||||||    
T  48721507 aaattgattaacgttgtgcaatttcagggggtaattgacgttttgttaatttcaagggggtaattgacgaaacttacaattt 48721588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49204233 - 49204283
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaat 50  Q
    ||||||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  49204233 aaattgattaacgttgttaaatttcataagagtaattgaagttttgttaat 49204283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50642910 - 50642860
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    |||||||||||  || ||||||||||| |||||||||||||||||||||||    
T  50642910 aaattgattaacattatgcaatttcatgaaggtaattgaagttttgttaat 50642860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9681018 - 9681067
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  9681018 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 9681067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10613838 - 10613887
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaa 49  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  10613838 aaattgattaacgttgtgcaatttcagagaggtaattgaagttttattaa 10613887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13158821 - 13158870
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| |||||||   |||||||||||||||||||||    
T  13158821 aaattgattaacgttgtgaaatttcaaggggtaattgaagttttgttaat 13158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38064866 - 38064785
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatg-taaagagtaattgac-aaacttacaattt 79  Q
    ||||| ||||| |||||||||||||| | || ||||||||||||| |||||| || || ||||||||| |||||||||||||    
T  38064866 aaattaattaacgttgtgcaatttcagaggggtaattgaagttttattaatgttatagggtaattgacgaaacttacaattt 38064785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42432216 - 42432167
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||| |   |||||||||||||||||||||    
T  42432216 aaattgattaacgttgtgcaattttaaggggtaattgaagttttgttaat 42432167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52579748 - 52579699
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  52579748 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 52579699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 35155158 - 35155088
Alignment:
Q  29 aggtaattgaagttttgttaatgtaaagag--taattgac-aaacttacaattttggagggtaattacctat 97  Q
    |||||||||||||||||||||| | ||| |  |||||||| ||||||||||||| || ||||||||||||||    
T  35155158 aggtaattgaagttttgttaatttcaaggggataattgacgaaacttacaatttagg-gggtaattacctat 35155088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45856588 - 45856489
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattttgga-gggtaattacctatt 98  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| | ||   |||||||| ||||||||||||| ||| |||||||| ||||||    
T  45856588 aaattgattaatgttgtgcaatttcatggggtaattgaagttttgttaattttaatgataattgacgaaacttacaatttcggaggggtaattgcctatt 45856489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22022987 - 22023085
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattg-acaaacttacaattttggagggtaattacctatt 98  Q
    |||||||||||| |||||||||||||    |||||||||||||||||||||| ||| ||||||| | |||||||||||||  | |||||||| ||||||    
T  22022987 aaattgattaatattgtgcaatttcagggtgtaattgaagttttgttaatgtcaagggtaattgaagaaacttacaatttcagggggtaattgcctatt 22023085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30023247 - 30023328
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||| | |  |||||||||||| |||||||||||||    
T  30023247 aaattgattaatgttgtgcaattttagagggtaattgaagttttgttaatttcaggagagtaattgacgaaacttacaattt 30023328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 30022561 - 30022481
Alignment:
Q  2 aattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||||| | |  |||||||||||| |||||||||||||    
T  30022561 aattgattaatgttatgcaatttcagagggtaattgaagttttgttaatttcaggagagtaattgacgaaacttacaattt 30022481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44471943 - 44471845
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattttggagggtaattacctatt 98  Q
    |||||||||||  ||||||||||||||| |||| |||||||||||||||| | ||| | |||||||| |||||||||||||| | |||||||| ||||||    
T  44471943 aaattgattaacattgtgcaatttcatagggtatttgaagttttgttaatatcaagggataattgacgaaacttacaattttag-gggtaattgcctatt 44471845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44157445 - 44157364
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||  |||||||||||||||||||||||| |  ||| |||||||| |||||||||||||    
T  44157445 aaattgattaacgttatgcaatttcaggaggtaattgaagttttgttaatgttaggagaataattgacgaaacttacaattt 44157364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9495693 - 9495742
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  9495693 aaattgattaacgttgtgcaatttcaggaggtaattgaagttttgttaat 9495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17775301 - 17775382
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | ||||| ||||||||| |||||||||||||    
T  17775301 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaatttcaaagaggtaattgacgaaacttacaattt 17775382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33227773 - 33227724
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  33227773 aaattgattaacgttgtgcaatttcaggaggtaattgaagttttgttaat 33227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40524687 - 40524588
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattttggagggtaattacctat 97  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| |  || | ||||||||| ||||||||||||||  | |||||||||||||    
T  40524687 aaattgattaacgttgtgcaatttca-ggggtaattgaagttttgttaatttcaaaggggtaattgacgaaacttacaattttaaaaggtaattacctat 40524589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45259024 - 45258924
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattttggagggtaattacctat 97  Q
    ||||||||||| |||||||||||||||  ||||||||| ||||||||||| | ||  || |||||||| |||||||||||||  | |||||||| |||||    
T  45259024 aaattgattaacgttgtgcaatttcatggggtaattgacgttttgttaatttcaagggaataattgacgaaacttacaatttcagggggtaattgcctat 45258925  T
Q  98 t 98  Q
    |    
T  45258924 t 45258924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27316280 - 27316228
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt 52  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||||||    
T  27316280 aaattgattaatgttgtgcaatttcagagggataattgaagttttgttaatgt 27316228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 21387236 - 21387322
Alignment:
Q  3 attgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattttggaggg 86  Q
    ||||||||| |||||||||||| |   ||||||||||||||||||||| | ||||  ||||||||| ||||||||||||| ||||||    
T  21387236 attgattaacgttgtgcaattttaggtggtaattgaagttttgttaatttcaagagggtaattgacgaaacttacaatttcggaggg 21387322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9491336 - 9491286
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  9491336 aaattgattaatgttgtgcaatttcaggagggtaattgaagttttgttaat 9491286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15753309 - 15753411
Alignment:
Q  1 aaattgattaatgttgtgcaatttc-ataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaatttt-ggagggtaattacct 95  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||| |  |||| |||||| || |||||||||||||| ||||||||||| |||    
T  15753309 aaattgattaacgttgtgcaatttcaagagggtaattgaagttttgttaatttcgaagaggtaattaacgaaacttacaattttaggagggtaattgcct 15753408  T
Q  96 att 98  Q
    |||    
T  15753409 att 15753411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 31308330 - 31308252
Alignment:
Q  14 ttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattttggagggtaatt 91  Q
    |||||||||||||  ||||||||||| |||||||||||| |   ||||||||| ||||||||||||||||  |||||||    
T  31308330 ttgtgcaatttcaggaggtaattgaaattttgttaatgtcagaggtaattgacaaaacttacaattttgggaggtaatt 31308252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33228573 - 33228674
Alignment:
Q  1 aaattgattaatgttgtgcaatttc-ataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattttggagggtaattaccta 96  Q
    ||||||||||| ||||||||||||| |  |||||||||||||||||||||| | |  || ||||||||| |||||||||||||  | |||||||| ||||    
T  33228573 aaattgattaacgttgtgcaatttcaaggaggtaattgaagttttgttaatttcatgagggtaattgacgaaacttacaatttcagggggtaattgccta 33228672  T
Q  97 tt 98  Q
    ||    
T  33228673 tt 33228674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21366347 - 21366298
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||| | |||||||||||||||||||||    
T  21366347 aaattgattaacgttatgcaatttcagagggtaattgaagttttgttaat 21366298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33210363 - 33210314
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  33210363 aaattgattaacgttatgcaatttcatggggtaattgaagttttgttaat 33210314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43671639 - 43671688
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| ||||||||| |||||||||||||    
T  43671639 aaattgattaacgttgtgaaatttcagaaggtaattaaagttttgttaat 43671688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48343673 - 48343624
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||| || |||||||||||||||||||    
T  48343673 aaattgattaacgttatgcaatttcatgagataattgaagttttgttaat 48343624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35498727 - 35498645
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||||| |  ||||||||| ||||||||||| |  || ||||||||||| |||||||||||||    
T  35498727 aaattgattaacgttgtgcaatttcagaggggtaattgacgttttgttaatttcaaaggagtaattgacaaaacttacaattt 35498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14312997 - 14312947
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||||||| ||||||||||  |||||||||||||||| ||||||    
T  14312997 aaattgattaatgttatgcaatttcaggaaggtaattgaagtttcgttaat 14312947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26244536 - 26244586
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  26244536 aaattgattaacgttgtgcaatttcaggaggataattgaagttttgttaat 26244586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38449911 - 38449861
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||| || |||||||||||||||||||    
T  38449911 aaattgattaacgttatgcaatttcataggggtaattgaagttttgttaat 38449861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43775552 - 43775646
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt-aaagagtaattga-caaacttacaattt-tggagggtaatt 91  Q
    ||||||||||| |||||| ||||| | | || ||||| ||||||||||||| | |||||||||||||  ||||||||||||| ||||||||||||    
T  43775552 aaattgattaacgttgtgaaattttagagggataattaaagttttgttaatttcaaagagtaattgatgaaacttacaatttctggagggtaatt 43775646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 48611280 - 48611381
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt-tggagggtaattaccta 96  Q
    ||||||||||| ||||||||||||||  ||||| || |  |||||||||| | |  | |||||||||| |||||||||||||  ||||||||||||||||    
T  48611280 aaattgattaacgttgtgcaatttcaggaggtagttaacattttgttaatttcatgaaagtaattgacgaaacttacaatttcaggagggtaattaccta 48611379  T
Q  97 tt 98  Q
    ||    
T  48611380 tt 48611381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1486730 - 1486681
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||||  |||||||||||||||||||||    
T  1486730 aaattgactaacgttgtgaaatttcatggggtaattgaagttttgttaat 1486681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2750383 - 2750334
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   ||||||||||||||| |||||    
T  2750383 aaattgattaacgttgtgcaatttcagggggtaattgaagttttattaat 2750334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21366936 - 21366985
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||| |||||| |||||||||||||||   ||||||||||||||||||||    
T  21366936 aaatggattaacgttgtgcaatttcatggtgtaattgaagttttgttaat 21366985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24181981 - 24181932
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| |||||||  ||||||||||||||||||||||    
T  24181981 aaattgactaacgttgtgaaatttcaggaggtaattgaagttttgttaat 24181932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34959148 - 34959196
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  34959148 aaattgattaacgttgtgcaatttca-ggggtaattgaagttttgttaat 34959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36900756 - 36900805
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  36900756 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 36900805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38184278 - 38184229
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  38184278 aaattgattaaagttatgcaatttcagggggtaattgaagttttgttaat 38184229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39880764 - 39880845
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||| ||||||||||    ||||||||||||||||||||| |  || ||||||||| ||||||||||||||    
T  39880764 aaattgattaacgttatgcaatttcaggggggtaattgaagttttgttaatttcgagggtaattgacgaaacttacaatttt 39880845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42260787 - 42260738
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||| || |||||||| ||||| | |||||||||||||||||||||    
T  42260787 aaattgataaacgttgtgcagtttcagagggtaattgaagttttgttaat 42260738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 44472820 - 44472921
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt-tggagggtaattaccta 96  Q
    ||||||||||| |||||| |||||||   | |||||||||||||||||||| | |  | ||||||||| ||||||||||||| |||||||||||| ||||    
T  44472820 aaattgattaacgttgtgaaatttcaggggagtaattgaagttttgttaatttcagggggtaattgacgaaacttacaatttctggagggtaattgccta 44472919  T
Q  97 tt 98  Q
    ||    
T  44472920 tt 44472921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48937195 - 48937243
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| | |||||||||||||||||||||    
T  48937195 aaattgattaacgttgtgaaatttca-agggtaattgaagttttgttaat 48937243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 15752327 - 15752283
Alignment:
Q  1 aaattgattaatgttgtgcaatttc-ataaggtaattgaagtttt 44  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||    
T  15752327 aaattgattaatgttgtgcaatttcaataggataattgaagtttt 15752283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23678870 - 23678958
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattttggaggg 86  Q
    ||||||||||| || ||||||||| | |  ||||||||||||||| |||| || | |||||||||||| ||||||| ||||||||||||    
T  23678870 aaattgattaacgtcgtgcaattttaaaggggtaattgaagttttattaacgtcagagagtaattgacgaaacttataattttggaggg 23678958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17215040 - 17214941
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattttggagggtaattacctatt 98  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | || || |||||||| |||||||||||||  |||||||||||||||||    
T  17215040 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaatttcaaggaataattgacgaaacttacaatttcagagggtaattacctatt 17214941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31891973 - 31891892
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||| ||||| |||||| ||||||| | ||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  31891973 aaattaattaacgttgtgtaatttcagagggtaattgaagttttgttaatgtcagagagtaattgacaaaacttacaatttt 31891892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21858473 - 21858555
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | ||  ||||||||||| ||||||||||||||    
T  21858473 aaattgattaacgttgtgcaatttcaaggggtaattgaagttttgttaattttaagggagtaattgacgaaacttacaatttt 21858555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21914336 - 21914418
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | ||  ||||||||||| ||||||||||||||    
T  21914336 aaattgattaacgttgtgcaatttcaaggggtaattgaagttttgttaattttaagggagtaattgacgaaacttacaatttt 21914418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24791597 - 24791496
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaattttggagg-gtaattaccta 96  Q
    ||||||||||| ||||||||||||||   | ||||||||||||||||||| | ||||| ||||||||| |||||||||||||| |||| |||| ||||||    
T  24791597 aaattgattaacgttgtgcaatttcaggggataattgaagttttgttaatttcaaagaggtaattgacgaaacttacaattttagaggagtaaataccta 24791498  T
Q  97 tt 98  Q
    ||    
T  24791497 tt 24791496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24816664 - 24816765
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaattttggagg-gtaattaccta 96  Q
    ||||||||||| ||||||||||||||   | ||||||||||||||||||| | ||||| ||||||||| |||||||||||||| |||| |||| ||||||    
T  24816664 aaattgattaacgttgtgcaatttcaggggataattgaagttttgttaatttcaaagaggtaattgacgaaacttacaattttagaggagtaaataccta 24816763  T
Q  97 tt 98  Q
    ||    
T  24816764 tt 24816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38350434 - 38350385
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  38350434 aaattgattaacgttgtgcaatttcatggggtaattgaagttttgttaat 38350385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41904079 - 41904030
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  41904079 aaattgattaacgttatgcaatttcatagggtaattgaagttttgttaat 41904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 53139958 - 53140059
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt-tggagggtaattaccta 96  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||| | |  | ||||||||| |||||||||||||  ||||||||||| ||||    
T  53139958 aaattgattaatgttgtgcaatttcatgggggtaattgaagttttgttaatttcagggggtaattgacgaaacttacaatttcaggagggtaattgccta 53140057  T
Q  97 tt 98  Q
    ||    
T  53140058 tt 53140059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23395933 - 23395886
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgtta 48  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  23395933 aaattgattaacgttgtgcaatttcaagaggtaattgaagttttgtta 23395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6508467 - 6508517
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  6508467 aaattgattaacgttgtgcaatttcataaaggtgattgaagttttgttaat 6508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24792509 - 24792590
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaag--agtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | |||  |||||||||| |||| ||||||||    
T  24792509 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaatttcaagaaagtaattgacgaaacatacaattt 24792590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 42259385 - 42259303
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| |||||||||||||||| |  ||||||||||||| ||||| | || ||||||||||| ||||||||||||||    
T  42259385 aaattgattaacgttgtgcaatttcataggaataattgaagttttattaatttcaaggagtaattgacgaaacttacaatttt 42259303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 56279872 - 56279779
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| || |||||||||||   ||||||||| ||||||||||| | ||||  ||||||||| ||||||||||||| || ||||||||    
T  56279872 aaattgattaacgtagtgcaatttcaaggggtaattgatgttttgttaatttcaagagggtaattgacgaaacttacaatttcggggggtaatt 56279779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25706092 - 25706141
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||  ||||| ||||||||| |||||||||||||||||||||    
T  25706092 aaattgattaacattgtgtaatttcatagggtaattgaagttttgttaat 25706141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41610645 - 41610596
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||| ||||||    
T  41610645 aaattgattaacgttgtgcaatttcatggggtaattgaagtttagttaat 41610596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 55082538 - 55082489
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||| || |||||||||||||| | |||||||||||||||||||||    
T  55082538 aaattgatcaacgttgtgcaatttcagagggtaattgaagttttgttaat 55082489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6521224 - 6521173
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    |||||||||||||||||||||||||| | ||||||| ||| |||| ||||||    
T  6521224 aaattgattaatgttgtgcaatttcaaatggtaattaaagatttggtaatgt 6521173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29798139 - 29798218
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   | |||||||||||||||||| ||   | ||||||||| |||||||||||||    
T  29798139 aaattgattaacgttgtgcaatttcaggtgataattgaagttttgttaacgtcgggggtaattgacgaaacttacaattt 29798218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36112227 - 36112321
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| ||||||||||||||   || ||||||||||||||||||| | | ||  ||||||||| |||||||||||||  ||||||||||    
T  36112227 aaattgattaacgttgtgcaatttcagggggataattgaagttttgttaatttcaggaaggtaattgacgaaacttacaatttcagagggtaatt 36112321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 37302478 - 37302372
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattttggagggtaattaccta 96  Q
    ||||||||||| |||||||||||||| | || ||||||||||||||||||| |  ||||  |||||||| |||||||| ||||  | |||||||| ||||    
T  37302478 aaattgattaacgttgtgcaatttcagagagataattgaagttttgttaatttcaaaaggataattgacgaaacttacgatttgagcgggtaattgccta 37302379  T
Q  97 ttgagtc 103  Q
    || ||||    
T  37302378 tttagtc 37302372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40033431 - 40033349
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||  | ||| ||||||||||||||||| |  | |||||||||||| |||||||||||||    
T  40033431 aaattgattaacgttgtgcaatttcaggagggtgattgaagttttgttaatttcgagagagtaattgacgaaacttacaattt 40033349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42342594 - 42342676
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||| | |   ||||||||||| ||||||||||||||    
T  42342594 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaatttcaggggagtaattgacgaaacttacaatttt 42342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21310922 - 21310872
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  21310922 aaattgattaacgttgtgcaatttcaaagtggtaattgaagttttgttaat 21310872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26171783 - 26171702
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||| ||||| ||||| | ||||  ||||||||| |||||||||||||    
T  26171783 aaattgattaacgttgtgcaatttcagggggtaattgacgttttattaatttcaagagggtaattgacgaaacttacaattt 26171702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38035780 - 38035830
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||| ||| |||||||||||||||||||    
T  38035780 aaattgattaacgttatgcaatttcatgagggtaattgaagttttgttaat 38035830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 51110154 - 51110073
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt--aaagagtaattga-caaacttacaattt 79  Q
    ||||||| ||| |||||| |||||||  |||||||||||||||||||||| |   ||||||||||||  |||||||||||||    
T  51110154 aaattgactaacgttgtgaaatttcaggaggtaattgaagttttgttaatttcagaagagtaattgatgaaacttacaattt 51110073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 54283432 - 54283382
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||  |||||||||||||||||||||||    
T  54283432 aaattgattaacgttatgcaatttcaggaaggtaattgaagttttgttaat 54283382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 56444208 - 56444258
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  | ||||||||||||||||||||    
T  56444208 aaattgattaacgttgtgcaatttcatgggagtaattgaagttttgttaat 56444258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1861479 - 1861430
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||  ||||||||||    
T  1861479 aaattgattaacgttgtgcaatttcatggggtaattgacattttgttaat 1861430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4630884 - 4630933
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||| |   |||||||||||||||||||||    
T  4630884 aaattgattaacgttgtgcaattttagggggtaattgaagttttgttaat 4630933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6077526 - 6077575
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||| ||||||||||| || ||||||||||    
T  6077526 aaattgattaacgttatgcaatttgataaggtaattaaaattttgttaat 6077575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7389466 - 7389417
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||| ||||||||||| || ||||||||||    
T  7389466 aaattgattaacgttatgcaatttgataaggtaattaaaattttgttaat 7389417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22524405 - 22524356
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| | |||||||||||| | ||||||| |||||||||||||    
T  22524405 aaattgattaacgatgtgcaatttcagagggtaattaaagttttgttaat 22524356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23520082 - 23520130
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  23520082 aaattgattaacgttgtgcaatttca-ggggtaattgaagttttgttaat 23520130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 38575647 - 38575566
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||    ||||||||||||||||||||||| | ||  |||||||| |||||||||||||    
T  38575647 aaattgattaacgttgtgcaatttcaggggggtaattgaagttttgttaatgtcagaggataattgacgaaacttacaattt 38575566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39334406 - 39334454
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  39334406 aaattgattaaagttgtgcaatttca-ggggtaattgaagttttgttaat 39334454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39633587 - 39633636
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  39633587 aaattgattaacgttatgcaatttcaggtggtaattgaagttttgttaat 39633636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42341800 - 42341751
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  42341800 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 42341751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44097762 - 44097713
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||||||||||||||||    ||||||||| |||||||||||    
T  44097762 aaattgattaatgttgtgcaatttcggggggtaattgacgttttgttaat 44097713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54445560 - 54445609
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  54445560 aaattgattaacgttatgcaatttcaaggggtaattgaagttttgttaat 54445609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 55083490 - 55083539
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   ||||||| |||||||||||||    
T  55083490 aaattgattaacgttgtgcaatttcagggggtaattaaagttttgttaat 55083539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9360525 - 9360605
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattt 79  Q
    |||||||||||| |||||||||||||   |||||| ||||||||||| |||| | | | |||||||| |||||||||||||    
T  9360525 aaattgattaatattgtgcaatttcagggggtaatagaagttttgttcatgtcacgggataattgacgaaacttacaattt 9360605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19538473 - 19538553
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| |||||||||| | || ||||||||||||||||||| | | | ||||||||| |||| ||||||||    
T  19538473 aaattgattaacgttatgcaatttcagaggggtaattgaagttttgttaatttcaggggtaattgacgaaacctacaattt 19538553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26762498 - 26762430
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgacaaa 69  Q
    ||||||||||| |||||| ||||| ||  |||||||||| |||||||||| | | |||||||| |||||    
T  26762498 aaattgattaacgttgtgaaattttatgcggtaattgaaattttgttaatttcaggagtaattaacaaa 26762430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40034361 - 40034409
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaa 49  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||    
T  40034361 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaa 40034409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3332 - 3283
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3332 aaattgattaacgttgtgcaatttcatagggtaattgaagttttgttaat 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23564766 - 23564709
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag 58  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||    
T  23564766 aaattgattaacgttgtacaatttcatagggtaattgaagttttgttaatgtcaagag 23564709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3416772 - 3416691
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||||| || |  ||||||||||| ||||||||||||||    
T  3416772 aaattgattaacgctgtgcaatttcagaaggtaattaaagttttgttaacgtcagggagtaattgacgaaacttacaatttt 3416691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23563984 - 23563892
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatg-taaagagtaattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||| | || ||  |||||||| |||||||||||||| ||||||||||    
T  23563984 aaattgattaacgttgtgcaatttcaaagaggtaattgaagttttgttaacgttagaggataattgacgaaacttacaatttt-gagggtaatt 23563892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25094235 - 25094186
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  25094235 aaattgattaacgttgtgcaatttcatggggtaattgaagttttgttaat 25094186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32449046 - 32448966
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||| | | ||| |||||||| ||||||||||||||    
T  32449046 aaattgattaatgttgtgcaatttcagga-gtaattgaagttttgttaatttcagagaataattgacgaaacttacaatttt 32448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11179978 - 11180058
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||  |||||||||||||||||||||| | |  ||||||||||| |||||||||||||    
T  11179978 aaattgattaacgttatgcaatttcaggaggtaattgaagttttgttaatttcagggagtaattgacgaaacttacaattt 11180058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29732736 - 29732818
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaatttt 80  Q
    |||||||||||  |||||||||||||   ||||||||||||||||||||| |  || ||||||||||| ||||||||||||||    
T  29732736 aaattgattaacattgtgcaatttcaaggggtaattgaagttttgttaattttaaaggagtaattgacgaaacttacaatttt 29732818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44869132 - 44869182
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  44869132 aaattgattaacgttatgcaatttcatgaaggtaattgaagttttgttaat 44869182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12503168 - 12503217
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  12503168 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaat 12503217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14598517 - 14598566
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||||||||| ||||||||   |||||||||||||||||||||    
T  14598517 aaattgattaatgttgtacaatttcagggggtaattgaagttttgttaat 14598566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20832791 - 20832840
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  20832791 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaat 20832840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26431570 - 26431651
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagag-taattgac-aaacttacaattt 79  Q
    ||||||||||| |||||| ||||||| | |||||||||| |||||||||| | |||||| |||||||| |||||||||||||    
T  26431570 aaattgattaacgttgtgaaatttcaaagggtaattgaaattttgttaatttcaaagagataattgacgaaacttacaattt 26431651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37007176 - 37007256
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga-gtaattgac-aaacttacaattt 79  Q
    |||||||||||  ||||  ||||||||| | ||||||||||||||||||| | |||| ||||||||| |||||||||||||    
T  37007176 aaattgattaacattgttaaatttcatatgctaattgaagttttgttaatttcaagaggtaattgacgaaacttacaattt 37007256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39584593 - 39584649
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgtaaag 56  Q
    ||||||||||||||| |||||||||| ||| ||||||||| |||||||||| |||||    
T  39584593 aaattgattaatgttatgcaatttcagaagagtaattgaaattttgttaatttaaag 39584649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44458681 - 44458631
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  44458681 aaattgattaacgttgtgcaatttcagg-ggtaattgaagttttgttaatgt 44458631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44466214 - 44466164
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  44466214 aaattgattaacgttgtgcaatttcagg-ggtaattgaagttttgttaatgt 44466164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6870072 - 6870122
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  6870072 aaattgattaacgttgtgcaatttcacgagggtaattgaagttttgttaat 6870122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12765085 - 12765166
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||| |   | ||||||||||| |||||||||||||    
T  12765085 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaatttcagaggagtaattgacgaaacttacaattt 12765166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15730604 - 15730554
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||| ||||| |||||||||||||| |||| |||||||||||||||||||    
T  15730604 aaattaattaacgttgtgcaatttcagaaggataattgaagttttgttaat 15730554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17733912 - 17733993
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaag--agtaattgac-aaacttacaattt 79  Q
    |||||||||||||||||  |||||||   ||||||||||||||||||||| | |||   ||||||||| |||||||||||||    
T  17733912 aaattgattaatgttgtagaatttcagggggtaattgaagttttgttaatttcaaggaggtaattgacaaaacttacaattt 17733993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32449452 - 32449506
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa 55  Q
    ||||| ||||| ||||||||||||||  || ||||||||||||||||||| ||||    
T  32449452 aaattaattaacgttgtgcaatttcaagagataattgaagttttgttaatttaaa 32449506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36468960 - 36468910
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  | |||||||||||||||||||||    
T  36468960 aaattgattaacgttgtgcaatttcaggagggtaattgaagttttgttaat 36468910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39132840 - 39132790
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    |||||||||||||||||| |||||||  | |||||||||||||||||||||    
T  39132840 aaattgattaatgttgtgaaatttcaggagggtaattgaagttttgttaat 39132790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 39864199 - 39864297
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattga-caaacttacaattttggagggtaattacctatt 98  Q
    ||||||| ||| || |||||||||||  |||||||||||||||| ||||| | | ||||||||||  ||||||| |||||  | |||||||| ||||||    
T  39864199 aaattgactaacgtcgtgcaatttcaggaggtaattgaagttttcttaatttcaggagtaattgatgaaacttataatttcagggggtaattgcctatt 39864297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44445556 - 44445637
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||| ||||||||||| | ||  | ||||||||| |||||||||||||    
T  44445556 aaattgattaacgttgtgcaatttcagggggtaattgacgttttgttaatttcaagggggtaattgacaaaacttacaattt 44445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 355280 - 355231
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| |||||||  ||||||||||||||||||||||    
T  355280 aaattgactaacgttgtgaaatttcaggaggtaattgaagttttgttaat 355231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2456327 - 2456419
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg---taattgaagttttgttaatgtaaagagtaattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| ||||||||||||  |||||   |||||||||||||||||| || | |  |||||||| ||||||||| |||| ||||||||||    
T  2456327 aaattgattaacgttgtgcaattt--taaggagataattgaagttttgttaacgtcagggataattgacgaaacttacacttttagagggtaatt 2456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21559813 - 21559862
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| | ||||||||||||||| |||||    
T  21559813 aaattgattaacgttgtgaaatttcagagggtaattgaagttttattaat 21559862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27576009 - 27576058
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||| || ||||||||||||||   |||||||||||||||||||||    
T  27576009 aaattgatcaacgttgtgcaatttcagggggtaattgaagttttgttaat 27576058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41393564 - 41393613
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  41393564 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 41393613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41575038 - 41574989
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  41575038 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 41574989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42355653 - 42355604
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  42355653 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 42355604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42993891 - 42993842
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| | | ||||||||||||| |||||    
T  42993891 aaattgattaacgttgtgcaatttcagaggataattgaagttttattaat 42993842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44671092 - 44671043
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  44671092 aaattgattaacgttatgcaatttcaaggggtaattgaagttttgttaat 44671043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9116236 - 9116331
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt--aaagagtaattga-caaacttacaattt-tggagggtaatt 91  Q
    ||||||||||| |||||| ||||||| | || ||||||||||||||||||| |   ||||||||||||  |||||||||||||  |||||||||||    
T  9116236 aaattgattaacgttgtgaaatttcagaggggtaattgaagttttgttaatttcagaagagtaattgatgaaacttacaatttcaggagggtaatt 9116331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 10970484 - 10970421
Alignment:
Q  19 caatttcataaggtaattgaagttttgttaatgtaaagag--taattgac-aaacttacaattt 79  Q
    |||||||| | ||||||||||||||||||||| | |||||  |||||||| |||||||||||||    
T  10970484 caatttcagagggtaattgaagttttgttaatttcaagaggataattgacgaaacttacaattt 10970421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10999500 - 10999580
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgaca-aacttacaattt 79  Q
    ||||||||||||||| |||||||||  | | ||||| || |||||||||||| |||| |||| ||||| ||||||||||||    
T  10999500 aaattgattaatgttatgcaatttcgaaggataattaaaattttgttaatgtcaaagggtaactgacacaacttacaattt 10999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12502199 - 12502151
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaa 49  Q
    ||||||||||| |||||||||||| |   ||||||||||||||||||||    
T  12502199 aaattgattaacgttgtgcaattttaaggggtaattgaagttttgttaa 12502151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 31819823 - 31819787
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattg 37  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  31819823 aaattgattaatgttatgcaatttcatagggtaattg 31819787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 41450053 - 41449958
Alignment:
Q  3 attgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattttggagggtaattacctatt 98  Q
    |||||| || ||||| |||||||||| |||||||| |||||| ||||||| | | ||||||| | ||||||||||||| ||||  ||||| ||||||    
T  41450053 attgatcaacgttgtccaatttcata-ggtaattggagttttattaatgtcatgggtaattgtcgaaacttacaatttcggagaataattgcctatt 41449958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 19239933 - 19240030
Alignment:
Q  4 ttgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt---aaagagtaattgacaaacttacaatttt-ggagggtaattacctatt 98  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||| |   |||| ||||||||| || |||||||||| ||||||||||| ||||||    
T  19239933 ttgatcaacgttgtgcaatttcatgaggtaattgaagttttgttaatttctgaaag-gtaattgacgaaattacaattttaggagggtaattgcctatt 19240030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40512443 - 40512349
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaa-tgtaaaga-gtaattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||| | |||||| ||||||||| |||||||||||||  ||||||||||    
T  40512443 aaattgattaacgttgtgcaatttcagaggggtaattgaagttttgttaattttaaagatgtaattgacgaaacttacaatttcagagggtaatt 40512349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21414756 - 21414805
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  21414756 aaattgattaacgttatgcaatttcatagggtaattgaagttttgttaat 21414805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35235924 - 35235973
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  35235924 aaattgattaacgttgtgcaatttcatggggtaattgaagttttgttaat 35235973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 45149812 - 45149892
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| |||||||||| | |||||||||| |||||||||| | | |||||||||||| |||||||||||||    
T  45149812 aaattgattaacgttatgcaatttcagagggtaattgaaattttgttaatttcagagagtaattgacgaaacttacaattt 45149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2444445 - 2444394
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||  ||||||||||||||| ||||||||    
T  2444445 aaattgattaaggttgtgcaatttcaggaggtaattgaagtttggttaatgt 2444394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20819325 - 20819232
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattttggagggtaatt 91  Q
    |||||||| || ||||||||||||||   | |||||| |||||||||||| | ||||  ||||||||| ||||||||||||| |||||||||||    
T  20819325 aaattgatcaacgttgtgcaatttcaggggataattggagttttgttaatttcaagagggtaattgacgaaacttacaatttcggagggtaatt 20819232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7579913 - 7579864
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||||||||    
T  7579913 aaattgattaacgttgtgcaatttcaagaggtaattgacgttttgttaat 7579864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22846978 - 22846929
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataa-ggtaattgaagttttgttaa 49  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  22846978 aaattgattaacgttgtgcaatttcaaaagggtaattgaagttttgttaa 22846929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35547065 - 35547016
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||| ||||||| |||||||||| | |||||||||||||||||||    
T  35547065 aaattgatttatgttgtacaatttcataggataattgaagttttgttaat 35547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38667218 - 38667169
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| ||| |||||||| ||||||||||    
T  38667218 aaattgattaacgttgtgcaatttcagaagataattgaaattttgttaat 38667169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40010156 - 40010239
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgt---aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||  | ||||||||||||||||||||| |   |||| ||||||||| |||||||||||||    
T  40010156 aaattgattaacgttgtgcaatttcaggagggtaattgaagttttgttaattttagaaagggtaattgacaaaacttacaattt 40010239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4490384 - 4490436
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt 52  Q
    ||||||||||| |||||||||||||| | || |||||||||||||||||||||    
T  4490384 aaattgattaacgttgtgcaatttcagaggggtaattgaagttttgttaatgt 4490436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21414393 - 21414313
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||  ||| ||||||||||||||||||| |  || ||||||||| |||||||||||||    
T  21414393 aaattgattaacgttatgcaatttcaggagggtaattgaagttttgttaatttcgagggtaattgacgaaacttacaattt 21414313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27656276 - 27656356
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||| |   ||||||||||| |||||||||||||    
T  27656276 aaattgattaacgttatgcaatttcaaggaggtaattgaagttttgttaatttcgggagtaattgacgaaacttacaattt 27656356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 49255755 - 49255675
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattga-caaacttacaattt 79  Q
    ||||||| ||| |||||| |||||||  |||||||||||||||||||||| | ||||| |||||||  |||||||||||||    
T  49255755 aaattgactaacgttgtgaaatttcaggaggtaattgaagttttgttaatttcaaagaataattgatgaaacttacaattt 49255675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6779911 - 6779990
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||||||||| |||||||| | ||||||||||||| || |||| | | | ||||||||| |||||||| ||||    
T  6779911 aaattgattaatgttgtacaatttcaaacggtaattgaagttatgctaatttcaggggtaattgacgaaacttaccattt 6779990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19961619 - 19961537
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgtaaa--gagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||  | ||||||||||||||||||||| | ||  | ||||||||| |||||||||||||    
T  19961619 aaattgattaacgttgtgcaatttcaggagggtaattgaagttttgttaatttcaagggggtaattgacgaaacttacaattt 19961537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41222668 - 41222767
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattga-caaacttacaattttggagggtaattacctatt 98  Q
    |||||||||||  |||||||||||||   ||||||||||||||||||||| | | ||||||||| |  |||||||||||||  |||| ||||| ||||||    
T  41222668 aaattgattaacattgtgcaatttcagggggtaattgaagttttgttaatttcagagagtaattaatgaaacttacaatttcagaggataattgcctatt 41222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11652959 - 11652909
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||| ||||||||||||||||  | |||||||||||||||||||||    
T  11652959 aaattgattgatgttgtgcaatttcaggagggtaattgaagttttgttaat 11652909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18073918 - 18073968
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  18073918 aaattgattaacgttgtgcaatttcatgaggataattgaagtttttttaat 18073968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25555571 - 25555482
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt--aaagagtaattgac-aaacttacaattttggaggg 86  Q
    |||||||||||  ||||||||||||| | ||||||||||| |||||||||| |   ||| ||||||||| |||||||||||||| |||||    
T  25555571 aaattgattaacattgtgcaatttcaaagaggtaattgaaattttgttaatttcagaagggtaattgacgaaacttacaattttagaggg 25555482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35233844 - 35233794
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||  ||| |||||||||||||||||||    
T  35233844 aaattgattaacgttgtgcaatttcaggaggataattgaagttttgttaat 35233794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37090486 - 37090536
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  37090486 aaattgattaacgttatgcaatttcagagaggtaattgaagttttgttaat 37090536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40278210 - 40278160
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||||||| |||||||||| |  |||||||||||||||||||||    
T  40278210 aaattgattaatgttatgcaatttcagaggggtaattgaagttttgttaat 40278160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49527952 - 49528002
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataa-ggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| |||||||| | |||||||||||||||||||||    
T  49527952 aaattgattaacgttgtgaaatttcatgacggtaattgaagttttgttaat 49528002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 55482353 - 55482435
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| |||||||||||| | | || ||||||||||||||||||| | | || ||||||||| ||||||||||||||    
T  55482353 aaattgattaacgttgtgcaatttgagagagataattgaagttttgttaatttcagagggtaattgacgaaacttacaatttt 55482435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35153998 - 35153949
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| |||||||||| |||||||  |||||||| |||||||||||||    
T  35153998 aaattgactaatgttgtgaaatttcaggaggtaattaaagttttgttaat 35153949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40791454 - 40791373
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgtaaaga-gtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||    ||||||||||||||||||||| | | || ||||||||| |||||||||||||    
T  40791454 aaattgattaacgttgtgcaatttcaggggggtaattgaagttttgttaatttcaggaggtaattgacgaaacttacaattt 40791373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42856785 - 42856834
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||||  ||||||||||||||| |||||    
T  42856785 aaattgattaacgttgtgaaatttcatggggtaattgaagttttattaat 42856834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43353638 - 43353589
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  43353638 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 43353589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 45257937 - 45257856
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||  || |||||| ||||||||||||| | | ||| |||||||| |||||||||||||    
T  45257937 aaattgattaacgttgtgcaatttcaggagagtaattaaagttttgttaatttcatagaataattgacaaaacttacaattt 45257856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45712516 - 45712467
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||| |||||||||   |||||||||||||||||||||    
T  45712516 aaattgattaacgttgcgcaatttcagggggtaattgaagttttgttaat 45712467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45970729 - 45970778
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  45970729 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 45970778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53628221 - 53628270
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| |||||||   |||||||||||||||||||||    
T  53628221 aaattgattaacgttgtgaaatttcaaggggtaattgaagttttgttaat 53628270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 54800169 - 54800088
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||| |   ||||||||||||||||||||| || ||| | |||||||| |||||||||||||    
T  54800169 aaattgattaacgttgtgcaattttagggaggtaattgaagttttgttaacgtcaagggataattgacgaaacttacaattt 54800088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31584789 - 31584706
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||||||||||||||    ||||||||||||||||||||| | ||||   |||||||| ||||||||||||||    
T  31584789 aaattgattaacgttgtgcaatttcaggggggtaattgaagttttgttaatttcaagaagataattgacgaaacttacaatttt 31584706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11158012 - 11158063
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  11158012 aaattgattaacgttgtgcaatttcaggaggtaattgaagttttgttaatgt 11158063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5576453 - 5576372
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||| | | || ||||||||| |||||||||||||    
T  5576453 aaattgattaacgttgtgcaatttcatggaggtaattgaagttttgttaatttcatagggtaattgacaaaacttacaattt 5576372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25823737 - 25823786
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  25823737 aaattgattaacgttgtgcaatttcaaaaagtaattgaagttttgttaat 25823786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26662259 - 26662352
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| |||||||||||| | | ||||||||||||||||||||||||  | || |||||||| ||||||||||||| | |||||||||    
T  26662259 aaattgattaacgttgtgcaattttagagaggtaattgaagttttgttaatgtctacagataattgacgaaacttacaatttcgaagggtaatt 26662352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26933854 - 26933947
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattttggagggtaatt 91  Q
    ||||||||||| |||||||||||| | | ||||||||||||||||||||||||  | || |||||||| ||||||||||||| | |||||||||    
T  26933854 aaattgattaacgttgtgcaattttagagaggtaattgaagttttgttaatgtctacagataattgacgaaacttacaatttcgaagggtaatt 26933947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27188729 - 27188778
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  27188729 aaattgattaacgttgtgcaatttcatggggtaattgaagttttgttaat 27188778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6914232 - 6914152
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga-gtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||| | | || ||||||||| |||||||||||||    
T  6914232 aaattgattaacgttgtgcaatttcaagtggtaattgaagttttgttaatttcaggaggtaattgacgaaacttacaattt 6914152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 36778319 - 36778243
Alignment:
Q  5 tgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||| | ||| ||||||||| ||||||| |||||    
T  36778319 tgattaacgttgtgcaatttcaaaaggataattgaagttttgttaatttcaagggtaattgacgaaacttaaaattt 36778243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 40988889 - 40988969
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaa-tgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||| | ||||  ||||||||| |||||||||||||    
T  40988889 aaattgattaacgttatgcaatttcatggggtaattgaagttttgttaattttaaaaggtaattgacgaaacttacaattt 40988969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 21085849 - 21085766
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattttg 81  Q
    |||||||||||  ||||||||||| | ||| |||||||||||||||||||||| | || ||||||||| |||||||||||||||    
T  21085849 aaattgattaacattgtgcaattttagaagagtaattgaagttttgttaatgtcatagggtaattgacgaaacttacaattttg 21085766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11665655 - 11665705
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataa-ggtaattgaagttttgttaat 50  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  11665655 aaattgattaatattgtgcaatttcagaaaggtaattgaagttttgttaat 11665705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 746444 - 746395
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||  ||||||||||||||||||||||    
T  746444 aaattgattaacgttatgcaatttcaggaggtaattgaagttttgttaat 746395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4104031 - 4103982
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| | |||||||||||||||||||||    
T  4104031 aaattgattaacgttgtgaaatttcagagggtaattgaagttttgttaat 4103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5790517 - 5790610
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt-tggagggtaatt 91  Q
    ||||||||||| || |||||||||||   ||||||||||||||||||||| | |  ||||||||||| |||||||||||||  |||||||||||    
T  5790517 aaattgattaacgtcgtgcaatttcaaggggtaattgaagttttgttaatttcagggagtaattgacgaaacttacaatttcaggagggtaatt 5790610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38978424 - 38978473
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  38978424 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaat 38978473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5577376 - 5577456
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||    ||||||||||||||||||||| | |||  |||||||| |||||||||||||    
T  5577376 aaattgattaacgttgtgcaatttcaggggggtaattgaagttttgttaatttcaaggataattgacgaaacttacaattt 5577456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9670668 - 9670600
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgacaaa 69  Q
    ||||||||||| |||||| ||||| | || ||||||||| |||||||||| | ||| ||||||||||||    
T  9670668 aaattgattaacgttgtgaaattttagaaagtaattgaaattttgttaatttgaagggtaattgacaaa 9670600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 18145777 - 18145730
Alignment:
Q  3 attgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||| |||||||||| |||||||  ||||||||||||||||||||||    
T  18145777 attgactaatgttgtgaaatttcaggaggtaattgaagttttgttaat 18145730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9587615 - 9587565
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  9587615 aaattgattaacgttgtgcaattccagagaggtaattgaagttttgttaat 9587565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9673312 - 9673362
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||| |||| |||||||||||||||||||    
T  9673312 aaattgattaacgttatgcaatttcaaaagggtaattgaagttttgttaat 9673362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11665058 - 11665013
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgtt 47  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||    
T  11665058 aaattgattaacgttgtgcaatttca-gaggtaattgaagttttgtt 11665013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25752942 - 25753023
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||| | |   ||||||||||| |||||||||||||    
T  25752942 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaatttcaggggagtaattgacgaaacttacaattt 25753023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29235558 - 29235477
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||| ||||||||||   ||||||||||||||||||||| | |  || ||||||||| |||||||||||||    
T  29235558 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaatttcaggagggtaattgacgaaacttacaattt 29235477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29236201 - 29236283
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaatttt 80  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||| |  | ||||||||||| ||||||||||||||    
T  29236201 aaattgattaacgttatgcaatttcaaggaggtaattgaagttttgttaatttcgaggagtaattgacgaaacttacaatttt 29236283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 747517 - 747566
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  747517 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 747566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1830169 - 1830218
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||||  |||||||||||||||||||||    
T  1830169 aaattgactaacgttgtgaaatttcatggggtaattgaagttttgttaat 1830218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2060688 - 2060639
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||| | |||||||||||||||||||||    
T  2060688 aaattgactaacgttgtgaaatttcagagggtaattgaagttttgttaat 2060639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6809483 - 6809564
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||| ||||| |||||||||||||| | || ||||||||||||||||||||| |  | ||||||||| |||||||||||||    
T  6809483 aaattaattaacgttgtgcaatttcagaggggtaattgaagttttgttaatgtcatggggtaattgacgaaacttacaattt 6809564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7482995 - 7483044
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||||  |||||||||||||||||||||    
T  7482995 aaattgactaacgttgtgaaatttcatggggtaattgaagttttgttaat 7483044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10622845 - 10622796
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  10622845 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 10622796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12404338 - 12404387
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||| | |||||||||||||||||||||    
T  12404338 aaattgactaacgttgtgaaatttcagagggtaattgaagttttgttaat 12404387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13544662 - 13544613
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||  |||||||||||||   |||||||||||||||||||||    
T  13544662 aaattgattaacattgtgcaatttcagggggtaattgaagttttgttaat 13544613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27500926 - 27500975
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  27500926 aaattgattaacgttatgcaatttcaaggggtaattgaagttttgttaat 27500975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 34217309 - 34217386
Alignment:
Q  5 tgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||| |||||||||||| | ||| || ||| ||||||||||||||| ||||| |||||||| |||||||||||||    
T  34217309 tgattaacgttgtgcaattttaaaagagtgattaaagttttgttaatgtcaaagaataattgacgaaacttacaattt 34217386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36499221 - 36499270
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  36499221 aaattgattaacgttatgcaatttcagggggtaattgaagttttgttaat 36499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40315636 - 40315685
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||||  |||||||||||||||||||||    
T  40315636 aaattgactaacgttgtgaaatttcatggggtaattgaagttttgttaat 40315685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11157052 - 11157000
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||    |||||||||||||||||||||||    
T  11157052 aaattgattaacgttgtgcaatttcaggggggtaattgaagttttgttaatgt 11157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17648368 - 17648463
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattt-tggagggtaatt 91  Q
    |||||||| || ||||||||||||||  ||| ||||||||||||||||||| | ||||  ||||||||| |||||||| ||||  |||||||||||    
T  17648368 aaattgatcaacgttgtgcaatttcaagagggtaattgaagttttgttaatttcaagagggtaattgacgaaacttactatttcaggagggtaatt 17648463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4647042 - 4647121
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||||| | | ||||||||||||||||||| | ||| ||||||||| ||||||| |||||    
T  4647042 aaattgattaacgttgtgcaatttcagaggataattgaagttttgttaatttcaagggtaattgacgaaacttataattt 4647121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39939380 - 39939281
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag-taattgac-aaacttacaattttggagggtaattacctatt 98  Q
    ||||||||||| ||||||||||||||   ||||||||||||||||||||||| | | | |||||||| |||||||||||||  | |||||||| ||||||    
T  39939380 aaattgattaacgttgtgcaatttcaaggggtaattgaagttttgttaatgtcaggggataattgacaaaacttacaatttcagggggtaattgcctatt 39939281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7337882 - 7337831
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||||    
T  7337882 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaatgt 7337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20463680 - 20463730
Alignment:
Q  1 aaattgattaatgttgtgcaatttca-taaggtaattgaagttttgttaat 50  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  20463680 aaattgattaatgttgtgcaatttcagggaggtaattgaagttttgttaat 20463730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34926052 - 34926133
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag--taattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||| |   ||||||||||||||||||||| ||||| |  |||||||| |||||||||||||    
T  34926052 aaattgattaacgttgtgcaattttagggggtaattgaagttttgttaatttaaaggggataattgacgaaacttacaattt 34926133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3768436 - 3768388
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  3768436 aaattgattaatgttgtgcaatttc-tggggtaattgaagttttgttaat 3768388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9708962 - 9709043
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaattt 79  Q
    |||||||| || ||||||||||||||   ||||||||||||||||||||| | ||||| ||||||||| |||||||||||||    
T  9708962 aaattgatcaacgttgtgcaatttcagggggtaattgaagttttgttaatttcaaagaggtaattgacgaaacttacaattt 9709043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10315303 - 10315254
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  10315303 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaat 10315254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36208114 - 36208163
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  36208114 aaattgattaacgttgtgcaatttcagggggtaattgaagttttgttaat 36208163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44747053 - 44746973
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga-gtaattgac-aaacttacaattt 79  Q
    ||||||||||||| |||| ||||||| | |||||||  |||||||||||| | |||| ||||||||| |||||||||||||    
T  44747053 aaattgattaatgatgtgtaatttcagagggtaatttgagttttgttaatttcaagaggtaattgacgaaacttacaattt 44746973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 27693928 - 27693873
Alignment:
Q  30 ggtaattgaagttttgttaatg-taaagagtaattgac-aaacttacaattttgga 83  Q
    |||||||||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  27693928 ggtaattgaagttttgttaatgttatagactaattgacgaaacttacaattttgga 27693873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3362796 - 3362714
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgtaaaga-gtaattgac-aaacttacaatttt 80  Q
    ||||||||||| |||||||||||||| | | |||||| ||||||||||||| | | || ||||||||| ||||||||||||||    
T  3362796 aaattgattaacgttgtgcaatttcagatgagtaattaaagttttgttaatttcatgaggtaattgacgaaacttacaatttt 3362714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3364046 - 3364127
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaaga--gtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||| ||||||||   ||||||||||||||||||||| | | ||  ||||||||| |||||||||||||    
T  3364046 aaattgattaacgttgtacaatttcagggggtaattgaagttttgttaatttcaggaaggtaattgacgaaacttacaattt 3364127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5607542 - 5607623
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaa--agagtaattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||| |   |||||||||||||| |||||| | |  |||||||||||| |||||||||||||    
T  5607542 aaattgattaacgttgtgcaatttgagggggtaattgaagtttcgttaatttcaggagagtaattgacgaaacttacaattt 5607623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6924394 - 6924444
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  6924394 aaattgattaacgttgtgcaatttcaaaggggtaattgaagttttgttaat 6924444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8306801 - 8306751
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  8306801 aaattgattaacgttgtgcaatttcagaggggtaattgaagttttgttaat 8306751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28780369 - 28780419
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| |  |||||||||||||||||||||    
T  28780369 aaattgattaacgttgtgcaatttcaaaggggtaattgaagttttgttaat 28780419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2694976 - 2694928
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| | |||||||||||||||||||||    
T  2694976 aaattgattaacgttgtgaaatttca-agggtaattgaagttttgttaat 2694928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3434546 - 3434465
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattga-caaacttacaatttt 80  Q
    ||||||| ||| |||||| |||||||   ||||||||||||||||||||| | |||| ||||||||  ||||||||||||||    
T  3434546 aaattgactaacgttgtgaaatttcagggggtaattgaagttttgttaatttcaaagggtaattgatgaaacttacaatttt 3434465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5438122 - 5438073
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||| | |||||| ||||||||||||||    
T  5438122 aaattgattaacgttatgcaatttcagagggtaatagaagttttgttaat 5438073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5606896 - 5606847
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||| ||||| ||||||||||||||   |||||||||||||||||||||    
T  5606896 aaattaattaacgttgtgcaatttcagggggtaattgaagttttgttaat 5606847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 6731396 - 6731477
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||  |||||||||||||| | || ||||||||||||||||||||| | |  ||||||||| |||||||||||||    
T  6731396 aaattgattaccgttgtgcaatttcagaggggtaattgaagttttgttaatgtcagaaggtaattgacgaaacttacaattt 6731477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8307444 - 8307493
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||| ||||||||   |||||||||||||||||||||    
T  8307444 aaattgattaacgttgtacaatttcagggggtaattgaagttttgttaat 8307493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9758389 - 9758340
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||  |||||||||||||   |||||||||||||||||||||    
T  9758389 aaattgattaacattgtgcaatttcagggggtaattgaagttttgttaat 9758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11871379 - 11871427
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||||  |||||||||||||||||||||    
T  11871379 aaattgattaacgttgtg-aatttcatggggtaattgaagttttgttaat 11871427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25991967 - 25991918
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||| | |||||||||||||||||||||    
T  25991967 aaattgactaacgttgtgaaatttcagagggtaattgaagttttgttaat 25991918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29366551 - 29366600
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||| ||||| ||| |||||||||| | |||||||||||||||||||||    
T  29366551 aaattaattaacgttatgcaatttcagagggtaattgaagttttgttaat 29366600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7275620 - 7275672
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataa-ggtaattgaagttttgttaatgt 52  Q
    ||||||||||| ||||| ||||||||  | |||||||||||||||||||||||    
T  7275620 aaattgattaacgttgtacaatttcacgacggtaattgaagttttgttaatgt 7275672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14251964 - 14251884
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| |||||||||||||| |   ||||| ||||||||||||| | | || ||||||||| |||||||||||||    
T  14251964 aaattgattaacgttgtgcaatttcagagaataattaaagttttgttaatttcatagggtaattgacgaaacttacaattt 14251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20207133 - 20207085
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaa 49  Q
    ||||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  20207133 aaattgattaacgttgtgcaatttcaagagagaattgaagttttgttaa 20207085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 41425519 - 41425467
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt 52  Q
    ||||||||||| |||||||||||||||  || ||||| |||||||||||||||    
T  41425519 aaattgattaacgttgtgcaatttcatggggataattaaagttttgttaatgt 41425467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17336555 - 17336636
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaatgt-aaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||| |||||||| |||| ||||||||||||||||||||| || | ||||||||| |||||||||||||    
T  17336555 aaattgattaacgttgtccaatttcagaagggtaattgaagttttgttaatgtcaaggggtaattgacaaaacttacaattt 17336636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1563002 - 1562900
Alignment:
Q  1 aaattgattaatgttgtgcaatttc-ataaggtaattgaagttttgttaatgt-aaaga-gtaattgac-aaacttacaatttt-ggagggtaattacct 95  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||||||| |  |||| |||||| || |||||||||||||| ||||||||||| |||    
T  1563002 aaattgattaacgttgtgcaatttcaagagggtaattgaagttttgttaatttcgaagaggtaattaacgaaacttacaattttaggagggtaattgcct 1562903  T
Q  96 att 98  Q
    |||    
T  1562902 att 1562900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32596421 - 32596372
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||||||    
T  32596421 aaattgattaatgttattcaatttcatggggtaattgaagttttgttaat 32596372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11957080 - 11957030
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    |||||||||||| |||||||||||||| | ||||||| |||||||||||||    
T  11957080 aaattgattaatattgtgcaatttcatgacggtaattaaagttttgttaat 11957030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23067621 - 23067671
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaat 50  Q
    ||||||||||| |||||| ||||||| |||| |||||||||||||||||||    
T  23067621 aaattgattaacgttgtgaaatttcagaagggtaattgaagttttgttaat 23067671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1798618 - 1798569
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||| | | ||||||||||||| |||||    
T  1798618 aaattgattaacgttgtgcaatttcaaaggataattgaagttttcttaat 1798569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5339974 - 5339925
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||| | ||| |||||||||||||||||    
T  5339974 aaattgattaacgttatgcaatttcagagggtgattgaagttttgttaat 5339925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8748815 - 8748766
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| ||| |||||| ||||||| | |||||||||||||||||||||    
T  8748815 aaattgactaacgttgtgaaatttcagagggtaattgaagttttgttaat 8748766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13209850 - 13209899
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||| |||||||||| |||||||   |||||||||||||||||||||    
T  13209850 aaattgactaatgttgtgaaatttcagggggtaattgaagttttgttaat 13209899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 17335096 - 17335063
Alignment:
Q  17 tgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||| |||||||||||||||||||||||    
T  17335096 tgcaatttcagaaggtaattgaagttttgttaat 17335063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1563984 - 1564028
Alignment:
Q  1 aaattgattaatgttgtgcaatttc-ataaggtaattgaagtttt 44  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||    
T  1563984 aaattgattaatgttgtgcaatttcaataggataattgaagtttt 1564028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3788746 - 3788798
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaatgt 52  Q
    ||||||| ||| ||| ||||||||||  |||||||||||||||||||||||||    
T  3788746 aaattgactaacgttatgcaatttcaggaaggtaattgaagttttgttaatgt 3788798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2379 - 2459
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaa-tgtaaagagtaattgac-aaacttacaattt 79  Q
    ||||||||||| ||||||||||||||    ||||||||||||||||||| | ||||| ||||||||| |||||||||||||    
T  2379 aaattgattaacgttgtgcaatttcagggtgtaattgaagttttgttaattttaaagggtaattgacgaaacttacaattt 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4476 - 4393
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaatgtaaagag--taattgac-aaacttacaatttt 80  Q
    |||||||||||||||||||||||||| |  ||||||||||||||| ||||| | |||||  |||||||| ||||||||||||||    
T  4476 aaattgattaatgttgtgcaatttcaaaggggtaattgaagttttattaatttcaagaggataattgacgaaacttacaatttt 4393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5225 - 5275
Alignment:
Q  1 aaattgattaatgttgtgcaatttcata-aggtaattgaagttttgttaat 50  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  5225 aaattgattaacattgtgcaatttcatagaggtaattgaagttttgttaat 5275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 94352 - 94271
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgtaaagag--taattga-caaacttacaattt 79  Q
    ||||||||||| |||||||||||||| | ||||||||| ||||||||||| | |||||  |||||||  |||||||||||||    
T  94352 aaattgattaacgttgtgcaatttcagagggtaattgacgttttgttaatttcaagaggataattgatgaaacttacaattt 94271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 880 - 831
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||||||| ||||||||||  || |||||||||||||||||||    
T  880 aaattgattaatgttatgcaatttcaggagataattgaagttttgttaat 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 59476 - 59427
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||| |||||||  ||||||||||||||||||||||    
T  59476 aaattgattaacgttgtgaaatttcaggaggtaattgaagttttgttaat 59427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38202 - 38251
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    |||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  38202 aaattgattaatattgtgcaatttcatggggtaattgaaattttgttaat 38251  T

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Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 130986 - 130937
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  130986 aaattgattaacgttatgcaatttcatggggtaattgaagttttgttaat 130937  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 119221 - 119169
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataag-gtaattgaagttttgttaatgt 52  Q
    |||||||||||||||||||||||| | | | ||||||||||||||||||||||    
T  119221 aaattgattaatgttgtgcaattttagaggagtaattgaagttttgttaatgt 119169  T

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Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 120118 - 120169
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaatgt 52  Q
    ||||||||||| |||||||||||||||   |||||||||||||| |||||||    
T  120118 aaattgattaacgttgtgcaatttcatggagtaattgaagttttattaatgt 120169  T

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Target: scaffold1063 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 359 - 309
Alignment:
Q  1 aaattgattaatgttgtgcaatttcat-aaggtaattgaagttttgttaat 50  Q
    ||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  359 aaattgattaacgttgtgcaatttcatgtaggtaattgacgttttgttaat 309  T

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Target: scaffold0474 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13158 - 13207
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||| ||||| ||| |||||||||| | |||||||||||||||||||||    
T  13158 aaattaattaacgttatgcaatttcaaagggtaattgaagttttgttaat 13207  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12940 - 12891
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||  ||||||||||||||  |||||||||| |||||||||||    
T  12940 aaattgattagcgttgtgcaatttcaagaggtaattgacgttttgttaat 12891  T

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Target: scaffold0219 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22232 - 22183
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||| ||||||||||||||   |||||||||| ||||||||||    
T  22232 aaattgattaacgttgtgcaatttcagggggtaattgaaattttgttaat 22183  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 46614 - 46565
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataagg-taattgaagttttgttaa 49  Q
    ||||||||||||||||||||||||||   || ||||||||||||||||||    
T  46614 aaattgattaatgttgtgcaatttcagggggataattgaagttttgttaa 46565  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42506 - 42555
Alignment:
Q  1 aaattgattaatgttgtgcaatttcataaggtaattgaagttttgttaat 50  Q
    ||||||||||||||| |||||||||    |||||||||||||||||||||    
T  42506 aaattgattaatgttatgcaatttcgaggggtaattgaagttttgttaat 42555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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