View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15343_low_36 (Length: 208)
Name: NF15343_low_36
Description: NF15343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15343_low_36 |
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Alignment Details
Target: chr8 (Bit Score: 76; Significance: 2e-35; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 42945015 - 42945162
Alignment:
| Q |
18 |
acatcacattgaatttactagtgtagcaannnnnnnataaacttatatcccgatacatcaaatgtctctataacattttgaaaggacttacttc------ |
111 |
Q |
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||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| || |
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| T |
42945015 |
acatcacattgaatttactagtgtagcaatttttttataaacttacatcccgactcatcaaatgtctctataacattttgaaaggacttacgtccccagg |
42945114 |
T |
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| Q |
112 |
----tgtaataaggcaagaaaaagtatttattagatattatttaatta |
155 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42945115 |
gtgttgtaataaggcaagaaaaagtatttattagatattatttaatta |
42945162 |
T |
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