View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15344_low_23 (Length: 300)
Name: NF15344_low_23
Description: NF15344
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15344_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 26099517 - 26099803
Alignment:
| Q |
1 |
agctccccggtatcacttaaccgggcagaactctgagcacgatttgagatggtgattagcatcatttgagtataaagtttctaaattcattgaacttaat |
100 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26099517 |
agctccccggtatcacttaacagggcagaactctgagcacgatttgagatggtgattagcatcatttgagtataaagtttctaaattcattgaacctaat |
26099616 |
T |
|
| Q |
101 |
ttggtacggtaggactcgtaacaaagtaatcaagcaattctaagttattttggaaaagcaaagcagattttattaactaccacatgccaaaggagaagac |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26099617 |
ttggtatggtaggactcgtaacaaagtaatcaagcaattctaagttattttggtaaagcaaagcagattttattaactaccacatgccaaaggagaagac |
26099716 |
T |
|
| Q |
201 |
atgcttagatagtgatacaaaatcattacaaaatagcctatgtatacattttactgggctctaacacatgtacgcatgaattcatct |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |
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| T |
26099717 |
atgcttagatagtgatacaaaatcattacaaaatagcctatgtatacattttactgggctattacacatgtacgcatgaattcatct |
26099803 |
T |
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