View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15345_high_1 (Length: 447)

Name: NF15345_high_1
Description: NF15345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15345_high_1
NF15345_high_1
[»] chr3 (89 HSPs)
chr3 (236-396)||(2582719-2582880)
chr3 (58-206)||(29342339-29342487)
chr3 (58-204)||(25025704-25025850)
chr3 (67-196)||(3944903-3945032)
chr3 (58-205)||(44868558-44868705)
chr3 (58-205)||(55281834-55281981)
chr3 (58-196)||(23584823-23584961)
chr3 (58-196)||(23599646-23599784)
chr3 (58-196)||(25025182-25025320)
chr3 (58-208)||(37375408-37375558)
chr3 (58-196)||(44868015-44868153)
chr3 (67-205)||(48218590-48218728)
chr3 (58-207)||(41875556-41875705)
chr3 (67-196)||(50687657-50687786)
chr3 (67-205)||(23584236-23584374)
chr3 (67-205)||(23599059-23599197)
chr3 (98-204)||(31014337-31014443)
chr3 (67-193)||(37373976-37374102)
chr3 (67-200)||(8427692-8427825)
chr3 (58-204)||(19555863-19556012)
chr3 (58-193)||(32672177-32672312)
chr3 (58-205)||(37374546-37374693)
chr3 (66-184)||(47737621-47737739)
chr3 (96-205)||(24220578-24220687)
chr3 (56-196)||(42356241-42356384)
chr3 (68-196)||(50675075-50675203)
chr3 (58-196)||(19555278-19555416)
chr3 (67-196)||(31014873-31015002)
chr3 (58-193)||(48219175-48219310)
chr3 (58-196)||(37374828-37374961)
chr3 (56-203)||(50674630-50674772)
chr3 (58-166)||(29342933-29343041)
chr3 (58-174)||(49752850-49752966)
chr3 (112-196)||(55282415-55282498)
chr3 (58-165)||(49752312-49752419)
chr3 (58-204)||(47737064-47737209)
chr3 (129-205)||(41459129-41459204)
chr3 (96-166)||(38575059-38575129)
chr3 (58-166)||(38575582-38575690)
chr3 (2-64)||(31014804-31014866)
chr3 (56-166)||(43658833-43658943)
chr3 (58-159)||(32672723-32672824)
chr3 (96-158)||(40887919-40887981)
chr3 (5-64)||(37374144-37374203)
chr3 (96-162)||(24221150-24221216)
chr3 (6-64)||(32672344-32672402)
chr3 (112-174)||(43103929-43103991)
chr3 (126-204)||(43658255-43658332)
chr3 (5-64)||(44868457-44868516)
chr3 (2-64)||(48218766-48218829)
chr3 (155-205)||(38279408-38279458)
chr3 (70-151)||(8427269-8427350)
chr3 (5-64)||(47737231-47737291)
chr3 (5-64)||(31014515-31014574)
chr3 (5-60)||(38575208-38575263)
chr3 (5-64)||(43658403-43658462)
chr3 (5-64)||(55282022-55282081)
chr3 (5-64)||(23584415-23584476)
chr3 (5-64)||(23599238-23599299)
chr3 (5-64)||(29342519-29342580)
chr3 (5-64)||(29342831-29342892)
chr3 (2-55)||(37374990-37375043)
chr3 (15-64)||(38575491-38575540)
chr3 (24-65)||(49752472-49752513)
chr3 (5-60)||(3945073-3945129)
chr3 (24-64)||(25025373-25025413)
chr3 (5-60)||(32672626-32672682)
chr3 (6-58)||(40887464-40887516)
chr3 (24-64)||(48219084-48219124)
chr3 (24-63)||(8427582-8427621)
chr3 (3-64)||(3945381-3945443)
chr3 (5-60)||(19555773-19555830)
chr3 (4-61)||(43104067-43104127)
chr3 (155-205)||(46187033-46187083)
chr3 (5-64)||(50687555-50687616)
chr3 (6-60)||(43658747-43658803)
chr3 (24-64)||(37374465-37374505)
chr3 (5-64)||(41875234-41875294)
chr3 (6-64)||(37375310-37375369)
chr3 (2-62)||(41875465-41875527)
chr3 (24-63)||(47737554-47737593)
chr3 (58-136)||(3945449-3945527)
chr3 (30-64)||(23584721-23584755)
chr3 (30-64)||(23599544-23599578)
chr3 (98-192)||(33454878-33454972)
chr3 (124-170)||(50687136-50687182)
chr3 (162-196)||(53269392-53269426)
chr3 (24-64)||(19555480-19555520)
chr3 (5-64)||(42356423-42356483)
[»] chr8 (68 HSPs)
chr8 (58-205)||(11998455-11998602)
chr8 (58-205)||(43591006-43591153)
chr8 (67-206)||(16889777-16889915)
chr8 (58-205)||(30115936-30116083)
chr8 (58-196)||(11999020-11999158)
chr8 (58-196)||(33114128-33114266)
chr8 (58-204)||(43481221-43481367)
chr8 (67-205)||(44061984-44062122)
chr8 (67-196)||(7818482-7818611)
chr8 (58-196)||(16889203-16889341)
chr8 (56-186)||(38778172-38778302)
chr8 (58-196)||(40309440-40309578)
chr8 (96-204)||(7819075-7819183)
chr8 (67-194)||(33113585-33113712)
chr8 (67-196)||(39852162-39852291)
chr8 (56-196)||(35237267-35237407)
chr8 (96-199)||(16880496-16880599)
chr8 (58-206)||(36848141-36848285)
chr8 (112-206)||(40907597-40907690)
chr8 (58-196)||(43591556-43591694)
chr8 (96-205)||(4373685-4373794)
chr8 (60-204)||(39852745-39852889)
chr8 (96-196)||(43480624-43480724)
chr8 (67-185)||(30115386-30115504)
chr8 (58-196)||(10806377-10806515)
chr8 (58-196)||(16879896-16880034)
chr8 (58-188)||(44062536-44062666)
chr8 (96-204)||(38778773-38778881)
chr8 (58-174)||(2209036-2209152)
chr8 (67-166)||(4374250-4374349)
chr8 (58-165)||(10805987-10806094)
chr8 (66-196)||(4374940-4375070)
chr8 (119-202)||(35237865-35237947)
chr8 (2-64)||(16880378-16880440)
chr8 (5-64)||(4373873-4373931)
chr8 (2-64)||(7818649-7818711)
chr8 (2-64)||(11998929-11998991)
chr8 (5-61)||(30115839-30115895)
chr8 (5-64)||(2209193-2209252)
chr8 (5-64)||(43591176-43591235)
chr8 (5-65)||(16889373-16889435)
chr8 (5-60)||(30115544-30115598)
chr8 (5-63)||(38778653-38778713)
chr8 (24-64)||(35237456-35237496)
chr8 (164-204)||(37533323-37533363)
chr8 (6-64)||(16889668-16889727)
chr8 (5-64)||(33113765-33113823)
chr8 (6-64)||(33114036-33114095)
chr8 (5-60)||(40907765-40907820)
chr8 (4-61)||(4374851-4374909)
chr8 (11-64)||(43480810-43480864)
chr8 (96-193)||(38572233-38572330)
chr8 (24-61)||(39852644-39852681)
chr8 (155-196)||(41761807-41761848)
chr8 (24-64)||(11998665-11998705)
chr8 (5-60)||(43481123-43481181)
chr8 (24-64)||(43591460-43591500)
chr8 (5-64)||(44062436-44062496)
chr8 (5-64)||(7818946-7819005)
chr8 (5-64)||(35237725-35237783)
chr8 (30-60)||(10806130-10806160)
chr8 (30-64)||(10806299-10806333)
chr8 (11-64)||(16880072-16880126)
chr8 (155-193)||(43433822-43433860)
chr8 (96-193)||(10198236-10198333)
chr8 (163-196)||(37532584-37532617)
chr8 (155-196)||(41762515-41762556)
chr8 (24-60)||(40309345-40309381)
[»] chr7 (58 HSPs)
chr7 (58-205)||(34853390-34853537)
chr7 (58-196)||(36682843-36682981)
chr7 (68-203)||(36683414-36683549)
chr7 (58-204)||(47814575-47814721)
chr7 (58-206)||(19816262-19816410)
chr7 (67-206)||(22275423-22275561)
chr7 (58-204)||(24043983-24044129)
chr7 (67-205)||(42456465-42456603)
chr7 (58-196)||(4895022-4895160)
chr7 (58-190)||(47813985-47814117)
chr7 (58-205)||(24323922-24324068)
chr7 (58-188)||(4894515-4894645)
chr7 (67-205)||(46814404-46814542)
chr7 (56-193)||(22276014-22276151)
chr7 (67-196)||(27855574-27855702)
chr7 (58-196)||(34853936-34854074)
chr7 (67-196)||(42455929-42456058)
chr7 (58-196)||(19816832-19816970)
chr7 (58-200)||(30711792-30711934)
chr7 (58-196)||(46732575-46732713)
chr7 (58-188)||(46815002-46815132)
chr7 (66-196)||(33805977-33806107)
chr7 (58-166)||(32499287-32499395)
chr7 (58-174)||(32499813-32499928)
chr7 (56-162)||(18520899-18521005)
chr7 (96-204)||(36620718-36620820)
chr7 (96-205)||(27856121-27856217)
chr7 (58-196)||(36620126-36620264)
chr7 (5-64)||(34853569-34853628)
chr7 (2-64)||(27855740-27855802)
chr7 (96-156)||(46012919-46012978)
chr7 (5-64)||(24323831-24323890)
chr7 (2-64)||(4894932-4894993)
chr7 (5-64)||(27855982-27856042)
chr7 (5-64)||(36683022-36683082)
chr7 (5-64)||(4894679-4894738)
chr7 (2-61)||(33806145-33806204)
chr7 (6-64)||(22275926-22275984)
chr7 (5-64)||(36620578-36620639)
chr7 (155-204)||(84377-84426)
chr7 (13-64)||(24043892-24043944)
chr7 (12-64)||(46012787-46012839)
chr7 (24-64)||(46732777-46732817)
chr7 (24-64)||(46814606-46814646)
chr7 (15-64)||(32499442-32499492)
chr7 (24-64)||(32499706-32499746)
chr7 (24-64)||(34853839-34853879)
chr7 (24-64)||(36620318-36620358)
chr7 (24-64)||(36683313-36683353)
chr7 (24-64)||(42456351-42456391)
chr7 (5-60)||(30711956-30712010)
chr7 (153-196)||(33806602-33806645)
chr7 (11-64)||(19816730-19816784)
chr7 (30-64)||(42456103-42456137)
chr7 (30-64)||(47814483-47814517)
chr7 (155-196)||(85086-85127)
chr7 (24-60)||(18521317-18521353)
chr7 (24-60)||(19816462-19816498)
[»] chr4 (89 HSPs)
chr4 (58-205)||(20075524-20075671)
chr4 (58-205)||(52597489-52597636)
chr4 (58-204)||(36945163-36945309)
chr4 (67-205)||(48782023-48782161)
chr4 (58-204)||(55816390-55816536)
chr4 (56-204)||(389343-389491)
chr4 (58-205)||(198998-199145)
chr4 (56-196)||(2713781-2713921)
chr4 (58-205)||(32902405-32902552)
chr4 (58-205)||(36111157-36111303)
chr4 (58-205)||(40345070-40345217)
chr4 (58-196)||(31876796-31876934)
chr4 (58-196)||(32291023-32291161)
chr4 (58-196)||(48091035-48091173)
chr4 (96-201)||(25369786-25369891)
chr4 (56-193)||(25370330-25370467)
chr4 (96-196)||(12639973-12640073)
chr4 (99-206)||(40848111-40848218)
chr4 (58-196)||(388761-388899)
chr4 (98-204)||(12640566-12640672)
chr4 (67-196)||(37567423-37567552)
chr4 (112-196)||(199220-199304)
chr4 (70-202)||(28223565-28223697)
chr4 (58-196)||(20422671-20422809)
chr4 (58-204)||(35427246-35427391)
chr4 (58-196)||(55815833-55815971)
chr4 (67-196)||(26424353-26424482)
chr4 (67-196)||(52597660-52597789)
chr4 (58-204)||(20422131-20422274)
chr4 (66-196)||(33569728-33569858)
chr4 (119-204)||(26423759-26423844)
chr4 (119-204)||(48090466-48090551)
chr4 (112-196)||(40847685-40847769)
chr4 (58-196)||(32901859-32901997)
chr4 (58-196)||(36944618-36944756)
chr4 (58-187)||(31842663-31842791)
chr4 (96-196)||(29809065-29809165)
chr4 (58-204)||(3708779-3708919)
chr4 (98-196)||(6862655-6862753)
chr4 (58-196)||(40344511-40344649)
chr4 (58-161)||(20076126-20076229)
chr4 (58-204)||(31877372-31877519)
chr4 (5-64)||(40344682-40344741)
chr4 (96-166)||(37566941-37567011)
chr4 (2-64)||(40847840-40847903)
chr4 (127-196)||(47321767-47321836)
chr4 (119-188)||(47328397-47328466)
chr4 (155-204)||(52869447-52869496)
chr4 (5-64)||(32902312-32902372)
chr4 (112-160)||(48781526-48781574)
chr4 (13-64)||(20422314-20422365)
chr4 (5-64)||(35427423-35427481)
chr4 (2-64)||(36944785-36944848)
chr4 (5-64)||(40344996-40345055)
chr4 (2-64)||(388928-388990)
chr4 (155-205)||(3221424-3221474)
chr4 (5-64)||(40847977-40848038)
chr4 (2-63)||(55816000-55816062)
chr4 (5-61)||(6862828-6862885)
chr4 (15-64)||(32291213-32291262)
chr4 (2-64)||(35427729-35427793)
chr4 (5-64)||(12640434-12640494)
chr4 (5-60)||(32902029-32902085)
chr4 (24-64)||(36111067-36111107)
chr4 (24-64)||(37567061-37567101)
chr4 (1-62)||(48781656-48781719)
chr4 (24-64)||(48781921-48781961)
chr4 (5-64)||(48090945-48091003)
chr4 (5-62)||(3708951-3709009)
chr4 (5-60)||(20075712-20075769)
chr4 (24-65)||(37567324-37567365)
chr4 (24-60)||(3709265-3709301)
chr4 (5-53)||(12640143-12640191)
chr4 (5-64)||(20076023-20076085)
chr4 (24-64)||(20422579-20422619)
chr4 (156-196)||(35428238-35428278)
chr4 (24-64)||(48090641-48090681)
chr4 (24-64)||(55816290-55816330)
chr4 (6-64)||(25369961-25370020)
chr4 (5-61)||(26423935-26423993)
chr4 (5-60)||(26424259-26424313)
chr4 (162-196)||(18501747-18501781)
chr4 (30-64)||(28223758-28223792)
chr4 (136-165)||(35428208-35428237)
chr4 (5-64)||(389243-389303)
chr4 (30-62)||(31877291-31877323)
chr4 (24-56)||(36945073-36945105)
chr4 (164-196)||(45778733-45778765)
chr4 (125-205)||(52722080-52722159)
[»] chr2 (66 HSPs)
chr2 (58-204)||(28224328-28224474)
chr2 (56-201)||(39477263-39477408)
chr2 (60-206)||(16887581-16887727)
chr2 (56-205)||(11256115-11256264)
chr2 (56-204)||(3595246-3595394)
chr2 (58-205)||(6849287-6849434)
chr2 (67-201)||(10883290-10883424)
chr2 (58-196)||(4386900-4387038)
chr2 (67-196)||(9224274-9224403)
chr2 (67-196)||(16571126-16571255)
chr2 (58-196)||(20244111-20244249)
chr2 (58-196)||(28223796-28223934)
chr2 (56-205)||(7583131-7583280)
chr2 (56-196)||(7583731-7583871)
chr2 (67-204)||(7717234-7717370)
chr2 (96-205)||(16571704-16571813)
chr2 (96-196)||(7716679-7716779)
chr2 (58-193)||(11256680-11256815)
chr2 (58-196)||(8113240-8113378)
chr2 (58-185)||(39476534-39476661)
chr2 (96-193)||(6849520-6849617)
chr2 (67-205)||(8112679-8112814)
chr2 (58-196)||(3595835-3595973)
chr2 (58-196)||(8963512-8963650)
chr2 (112-205)||(40166837-40166930)
chr2 (58-174)||(20243583-20243699)
chr2 (66-196)||(33847881-33848011)
chr2 (98-196)||(40165881-40165979)
chr2 (96-193)||(16903067-16903164)
chr2 (58-170)||(467139-467251)
chr2 (113-196)||(30161941-30162024)
chr2 (58-206)||(17918019-17918167)
chr2 (137-206)||(4386353-4386422)
chr2 (103-205)||(467326-467430)
chr2 (58-153)||(17918625-17918720)
chr2 (5-64)||(17918525-17918584)
chr2 (5-64)||(28224226-28224285)
chr2 (5-60)||(40166693-40166748)
chr2 (5-63)||(39477166-39477224)
chr2 (5-64)||(8112855-8112914)
chr2 (5-64)||(11256580-11256639)
chr2 (5-64)||(16571575-16571634)
chr2 (2-64)||(20244019-20244082)
chr2 (2-64)||(28223963-28224026)
chr2 (6-64)||(3595754-3595812)
chr2 (2-64)||(7583307-7583371)
chr2 (5-63)||(3595433-3595491)
chr2 (5-64)||(7583637-7583697)
chr2 (2-61)||(12207246-12207306)
chr2 (24-64)||(30162140-30162180)
chr2 (153-196)||(12206796-12206839)
chr2 (13-64)||(17918217-17918268)
chr2 (5-64)||(20243732-20243791)
chr2 (6-64)||(30162432-30162491)
chr2 (6-64)||(7717136-7717194)
chr2 (30-64)||(11256320-11256354)
chr2 (11-63)||(4386496-4386549)
chr2 (6-64)||(7716849-7716911)
chr2 (2-51)||(9224441-9224489)
chr2 (24-64)||(16571305-16571345)
chr2 (2-61)||(40166032-40166092)
chr2 (153-196)||(33848496-33848539)
chr2 (5-64)||(4386797-4386858)
chr2 (158-196)||(43743842-43743880)
chr2 (5-58)||(16902957-16903008)
chr2 (156-196)||(18949917-18949957)
[»] chr6 (28 HSPs)
chr6 (67-205)||(6032157-6032295)
chr6 (58-203)||(5523201-5523346)
chr6 (58-205)||(30610710-30610857)
chr6 (67-196)||(33668229-33668358)
chr6 (67-205)||(12809068-12809206)
chr6 (58-200)||(13944294-13944436)
chr6 (58-196)||(5523786-5523924)
chr6 (58-196)||(30611285-30611423)
chr6 (58-196)||(13936580-13936718)
chr6 (67-196)||(12809651-12809780)
chr6 (67-204)||(33668780-33668916)
chr6 (67-191)||(31723846-31723970)
chr6 (58-196)||(6032693-6032831)
chr6 (66-196)||(33648111-33648241)
chr6 (2-65)||(6032601-6032664)
chr6 (2-64)||(33668396-33668460)
chr6 (58-163)||(31724388-31724494)
chr6 (5-64)||(13944459-13944519)
chr6 (5-60)||(33668674-33668730)
chr6 (26-64)||(6032345-6032383)
chr6 (4-63)||(30610897-30610958)
chr6 (4-61)||(33648013-33648073)
chr6 (155-204)||(2038596-2038645)
chr6 (24-60)||(12809556-12809592)
chr6 (24-64)||(30611197-30611237)
chr6 (30-64)||(5523415-5523449)
chr6 (5-60)||(31724011-31724068)
chr6 (5-61)||(12809238-12809295)
[»] chr1 (62 HSPs)
chr1 (58-204)||(27797117-27797263)
chr1 (58-204)||(43368775-43368921)
chr1 (58-205)||(7219588-7219734)
chr1 (67-190)||(42839497-42839620)
chr1 (58-204)||(42840253-42840399)
chr1 (96-205)||(1403666-1403774)
chr1 (56-196)||(1403048-1403188)
chr1 (100-204)||(52859770-52859874)
chr1 (98-209)||(42839696-42839807)
chr1 (67-206)||(49533741-49533880)
chr1 (58-196)||(27816944-27817082)
chr1 (67-204)||(8560692-8560828)
chr1 (58-196)||(42838945-42839083)
chr1 (96-202)||(48843582-48843688)
chr1 (56-196)||(8560164-8560304)
chr1 (58-196)||(27797676-27797814)
chr1 (58-196)||(49534336-49534474)
chr1 (67-209)||(51248432-51248574)
chr1 (67-191)||(43368203-43368327)
chr1 (98-196)||(6288184-6288282)
chr1 (96-208)||(41563175-41563287)
chr1 (67-166)||(48843911-48844010)
chr1 (66-196)||(48369490-48369620)
chr1 (112-196)||(7782685-7782769)
chr1 (67-159)||(41563741-41563833)
chr1 (58-166)||(51247866-51247974)
chr1 (56-195)||(27934233-27934371)
chr1 (58-152)||(6287672-6287766)
chr1 (62-160)||(37725423-37725521)
chr1 (67-164)||(7219048-7219145)
chr1 (5-64)||(52859635-52859694)
chr1 (5-64)||(51248007-51248067)
chr1 (5-64)||(27797295-27797354)
chr1 (2-64)||(51248331-51248394)
chr1 (58-164)||(52859189-52859295)
chr1 (5-64)||(6287798-6287857)
chr1 (6-64)||(8560334-8560393)
chr1 (2-61)||(27934147-27934206)
chr1 (5-64)||(42839408-42839467)
chr1 (2-64)||(43368365-43368428)
chr1 (5-64)||(49533930-49533989)
chr1 (100-193)||(11032163-11032256)
chr1 (5-62)||(42840164-42840221)
chr1 (5-63)||(43368683-43368743)
chr1 (5-64)||(1403218-1403278)
chr1 (5-64)||(37725559-37725619)
chr1 (24-64)||(41563638-41563678)
chr1 (2-61)||(48369658-48369718)
chr1 (5-60)||(7219500-7219555)
chr1 (2-61)||(7782552-7782610)
chr1 (24-63)||(48843824-48843863)
chr1 (5-64)||(52859337-52859395)
chr1 (30-64)||(7219213-7219247)
chr1 (120-161)||(37725672-37725713)
chr1 (164-205)||(48620369-48620410)
chr1 (24-64)||(27797580-27797620)
chr1 (24-64)||(42839140-42839180)
chr1 (24-64)||(48843769-48843809)
chr1 (30-65)||(49534242-49534277)
chr1 (155-189)||(29148955-29148989)
chr1 (24-62)||(42839903-42839941)
chr1 (2-69)||(6288045-6288115)
[»] chr5 (41 HSPs)
chr5 (56-196)||(3957508-3957648)
chr5 (58-211)||(26687493-26687646)
chr5 (58-211)||(26957224-26957377)
chr5 (67-207)||(4928868-4929008)
chr5 (58-196)||(28075909-28076047)
chr5 (96-196)||(4929484-4929584)
chr5 (58-204)||(3739603-3739749)
chr5 (96-196)||(33430051-33430150)
chr5 (101-205)||(21769993-21770101)
chr5 (98-196)||(5324383-5324481)
chr5 (58-196)||(8813623-8813761)
chr5 (58-200)||(3958074-3958216)
chr5 (58-166)||(42408505-42408613)
chr5 (103-185)||(42408011-42408093)
chr5 (58-166)||(3739038-3739146)
chr5 (66-178)||(13738086-13738197)
chr5 (140-206)||(5324302-5324368)
chr5 (6-65)||(3957687-3957746)
chr5 (96-196)||(26688035-26688127)
chr5 (96-196)||(26957766-26957858)
chr5 (146-203)||(8813078-8813135)
chr5 (5-61)||(4929058-4929114)
chr5 (13-64)||(8813241-8813292)
chr5 (5-64)||(3739512-3739571)
chr5 (2-60)||(4929359-4929417)
chr5 (5-64)||(8813529-8813590)
chr5 (5-64)||(3739177-3739239)
chr5 (5-61)||(3957977-3958033)
chr5 (155-195)||(25075034-25075074)
chr5 (155-195)||(25133003-25133043)
chr5 (13-64)||(26687684-26687735)
chr5 (13-64)||(26957415-26957466)
chr5 (2-64)||(42408413-42408476)
chr5 (155-196)||(39149468-39149509)
chr5 (24-60)||(28075810-28075846)
chr5 (125-196)||(25074291-25074362)
chr5 (125-196)||(25132260-25132331)
chr5 (6-64)||(21770175-21770233)
chr5 (155-205)||(39148767-39148817)
chr5 (5-53)||(42408170-42408219)
chr5 (181-213)||(38064926-38064958)
[»] scaffold0007 (1 HSPs)
scaffold0007 (58-196)||(11274-11411)
[»] scaffold0229 (1 HSPs)
scaffold0229 (56-196)||(15171-15311)
[»] scaffold1095 (2 HSPs)
scaffold1095 (58-204)||(1485-1631)
scaffold1095 (30-64)||(1677-1711)
[»] scaffold0368 (2 HSPs)
scaffold0368 (98-196)||(11764-11862)
scaffold0368 (24-62)||(11630-11668)
[»] scaffold0039 (1 HSPs)
scaffold0039 (155-196)||(90623-90664)


Alignment Details
Target: chr3 (Bit Score: 117; Significance: 2e-59; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 236 - 396
Target Start/End: Complemental strand, 2582880 - 2582719
Alignment:
Q  236 taattacttcaagtggaatgaattatgggaaaaaatgtgcaaggataaaaaattatttaagtctaatagcnnnnnnntgtccaaggat-aaaaagtttat 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||||  ||||    
T  2582880 taattacttaaagtggaatgaattatgggaaaaaatgtgcaaggataaaaaattatttaagtctaatagcaaaaaaatgtccaaggataaaaaaaattat 2582781  T
Q  335 tgaagattaataaatttgttatgcaacacaatacatgttaggcacttcattcaaatttatgc 396  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2582780 ttaagattaataaatttgttatgcaacacaatacatgttaggcacttcattcaaatttatgc 2582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 29342487 - 29342339
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29342487 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgtggagggagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 29342388  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29342387 tttcccatggtgggaaaagattaacctttcccatgtgaacacacacctt 29342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 25025704 - 25025850
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||| |||    
T  25025704 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttctcttaatctaatcattgaatcaaac 25025803  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  25025804 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 25025850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 3945032 - 3944903
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3945032 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 3944933  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||||||||    
T  3944932 gtgggaaaggattaacctttcccatgtgaa 3944903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 44868558 - 44868705
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||||         ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||     
T  44868558 agaatttttaaattgttggaagatagtgttaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaat 44868657  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44868658 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 44868705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 55281981 - 55281834
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||     
T  55281981 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaat 55281882  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55281881 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 55281834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 23584823 - 23584961
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||| |||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23584823 agaatttttaaattgttggaaggtagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 23584922  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  23584923 tttaccatggtgggaaaggattaacctttcccatgtgaa 23584961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 23599646 - 23599784
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||| |||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23599646 agaatttttaaattgttggaaggtagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 23599745  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  23599746 tttaccatggtgggaaaggattaacctttcccatgtgaa 23599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 25025320 - 25025182
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  25025320 agaatttttaaattgttggaagatagtgtgaaaaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaac 25025221  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  25025220 tttcccatgatgggaaaggattaacctttcccatgtgaa 25025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 208
Target Start/End: Original strand, 37375408 - 37375558
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||    
T  37375408 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaagatgttcttcacttaatctaatcatcgaatccaac 37375507  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacaccttca 208  Q
    ||||  ||||||||||| |||||||||||||||||| ||||||||||||||    
T  37375508 tttcttatggtgggaaaggattaacctttcccatgtaaacacacaccttca 37375558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 44868153 - 44868015
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  44868153 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaac 44868054  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  44868053 tttcccatggtggaaaatgattaacctttcctatgtgaa 44868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 48218728 - 48218590
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||     
T  48218728 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatccaacttttccata 48218629  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  48218628 gtgggaaaagattaacctttctcatgtgaacacacacct 48218590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 58 - 207
Target Start/End: Original strand, 41875556 - 41875705
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  41875556 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaacccaac 41875655  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacaccttc 207  Q
    |||||||||||   ||||||||||| |||||||| |||||||||||||||    
T  41875656 tttcccatggtaaaaaatgattaacttttcccatctgaacacacaccttc 41875705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 50687657 - 50687786
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50687657 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatg 50687756  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||  ||||||||||||||||||||    
T  50687757 gtgggaaagaattaacctttcccatgtgaa 50687786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 23584374 - 23584236
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||| ||||||||||||        |||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  23584374 aaattgttagaagatagtgtgaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatg 23584275  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  23584274 gtgggaaaggattaacctgtcccatgtgaacacacacct 23584236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 23599197 - 23599059
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||| ||||||||||||        |||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  23599197 aaattgttagaagatagtgtgaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatg 23599098  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  23599097 gtgggaaaggattaacctgtcccatgtgaacacacacct 23599059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 31014443 - 31014337
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaac 197  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||    
T  31014443 tagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaac 31014344  T
Q  198 acacacc 204  Q
    |||||||    
T  31014343 acacacc 31014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 37374102 - 37373976
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37374102 aaattgttggaagatagtgtgaagaaaaatctagtgttgagaaaacatgttaagaatatgttcttcacttaatttaatcattgaatccaactttcccatg 37374003  T
Q  167 gtgggaaatgattaacctttcccatgt 193  Q
    |||||||| ||||||||||||||||||    
T  37374002 gtgggaaaagattaacctttcccatgt 37373976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 200
Target Start/End: Original strand, 8427692 - 8427825
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  8427692 aaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatctaactttcccatg 8427791  T
Q  167 gtgggaaatgattaacctttcccatgtgaacaca 200  Q
    |||||||| |||||||||| ||||||||||||||    
T  8427792 gtgggaaaggattaaccttccccatgtgaacaca 8427825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 19555863 - 19556012
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatc---c 154  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||   |    
T  19555863 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcctac 19555962  T
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
     ||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  19555963 tactttcccatgatgggaaaggattaacctttctcatgtgaacacacacc 19556012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 32672312 - 32672177
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  32672312 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatctaatcattaaatccaac 32672213  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  32672212 tttcccatgttgggaaaggattaacctttcccatgt 32672177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 37374546 - 37374693
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  37374546 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaac 37374645  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||| ||| ||||||| | ||||| ||||||||||||| ||||||||    
T  37374646 tttcctatgatgggaaaaggttaacatttcccatgtgaatacacacct 37374693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 47737621 - 47737739
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47737621 aaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaacattcccat 47737720  T
Q  166 ggtgggaaatgattaacct 184  Q
    |||||||||||||||||||    
T  47737721 ggtgggaaatgattaacct 47737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 24220687 - 24220578
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||| |||||  |||||||||||||||||||    
T  24220687 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgtga 24220588  T
Q  196 acacacacct 205  Q
    ||||||||||    
T  24220587 acacacacct 24220578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 42356384 - 42356241
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||| ||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42356384 ttagaatttttaaattgttagaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 42356285  T
Q  156 actttcccatg---gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||   |||||||| |||| ||||||||||||||||    
T  42356284 actttcccatggtggtgggaaaggattgacctttcccatgtgaa 42356241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 196
Target Start/End: Original strand, 50675075 - 50675203
Alignment:
Q  68 aattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatgg 167  Q
    ||||||||||||||||||||        ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  50675075 aattgttggaagatagtgtgaagaaaaatctagtgttgagagtgcatgttaataatatgttcttcacttaatctaatcattgaattcaactttcccattg 50675174  T
Q  168 tgggaaatgattaacctttcccatgtgaa 196  Q
    ||  ||| |||||||||||||||||||||    
T  50675175 tgaaaaaggattaacctttcccatgtgaa 50675203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 19555416 - 19555278
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||    
T  19555416 agaatttttaaattgttggaatatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaac 19555317  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||||||| |||||||||||  ||||||||    
T  19555316 tttcccatgatgggaaaagattaacctttttcatgtgaa 19555278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 31014873 - 31015002
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        | ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31014873 aaattgttggaagatagtgtgaagaaaaatttagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcctatg 31014972  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
     ||||||| |||||||||||||||| ||||    
T  31014973 atgggaaaagattaacctttcccatatgaa 31015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 48219175 - 48219310
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||     
T  48219175 agaatttttaaattgttggaagatagtgtgaagaaaagtctagtgttgagagagcatgttaagaatatattcatcacttaatctaatcattgaatccaat 48219274  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgt 193  Q
    |||||||||||| ||||  |||||||||||||||||    
T  48219275 tttcccatggtgagaaagaattaacctttcccatgt 48219310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 37374961 - 37374828
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  37374961 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 37374862  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||     |||||| |||||||||||||||||||||    
T  37374861 tttccc-----gggaaaggattaacctttcccatgtgaa 37374828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 56 - 203
Target Start/End: Complemental strand, 50674772 - 50674630
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  |||| ||| |||||||||| |||||||||||||     ||||||    
T  50674772 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgctaaaaatatgttctacacttaatctaat-----aatcca 50674678  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacacac 203  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  50674677 actttcccatggtgggaaaagattaacctttctcatgtgaacacacac 50674630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 29342933 - 29343041
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29342933 agaatttttaaattgttggaagatagtgtgcagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 29343032  T
Q  158 tttcccatg 166  Q
    ||| |||||    
T  29343033 ttttccatg 29343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 49752850 - 49752966
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||||||||    
T  49752850 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaac 49752949  T
Q  158 tttcccatggtgggaaa 174  Q
    ||||||||||| |||||    
T  49752950 tttcccatggtaggaaa 49752966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 55282415 - 55282498
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||||||||    
T  55282415 catgttaagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaaac-ttcccatgtgaa 55282498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 49752419 - 49752312
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||    
T  49752419 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcctac 49752320  T
Q  158 tttcccat 165  Q
    ||||||||    
T  49752319 tttcccat 49752312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 47737209 - 47737064
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||| |        |||||| |||||||  ||||||||||||||||||| |||||||||||||| |||||||||||    
T  47737209 agaatttttaaattgttggaagatagtgcgaagaaaaatctagtattgagagaacatgttaagaatatgttctccacttaatctaatcgttgaatccaac 47737110  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    || |||| ||||||||| || ||||||||||||| | ||||||||||    
T  47737109 ttaccca-ggtgggaaaggaataacctttcccatattaacacacacc 47737064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 41459204 - 41459129
Alignment:
Q  129 cttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  41459204 cttcacttaatctaatcattgaatc-aactttctcatggtgggaaaggattaacctttcccatgtgaacacacacct 41459129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 38575129 - 38575059
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38575129 tctagtgttgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 38575582 - 38575690
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||| |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  38575582 agaatttttaaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaac 38575681  T
Q  158 tttcccatg 166  Q
    ||| |||||    
T  38575682 ttttccatg 38575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 31014866 - 31014804
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31014866 tcgaaaaaaattcagataatttttttttaaattatgtaattcatttattgaatgttagaattt 31014804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 43658833 - 43658943
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||  |||||||||||        |||| |||||| ||  | ||||||||||||||||||||||||||||||||||||||||||    
T  43658833 ttagaattttaaaattgttaaaagatagtgtgaagaaaaatctaatgttgaaagagcctgttaagaatatgttcttcacttaatctaatcattgaatcca 43658932  T
Q  156 actttcccatg 166  Q
    |||||||||||    
T  43658933 actttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 32672723 - 32672824
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32672723 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcgcttaatctaatcattaaatccaac 32672822  T
Q  158 tt 159  Q
    ||    
T  32672823 tt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 40887919 - 40887981
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaact 158  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  40887919 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 37374144 - 37374203
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  37374144 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 37374203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 24221150 - 24221216
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcc 162  Q
    ||||||||||||||  |||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  24221150 tctagtgttgagagagcatgttaagaatgtgttcttcacttaatataatcattaaatccaactttcc 24221216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 32672344 - 32672402
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  32672344 aaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 32672402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 43103991 - 43103929
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaa 174  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||    
T  43103991 catgttaagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaa 43103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 43658332 - 43658255
Alignment:
Q  126 gttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||||||||||||| |||||||||||| ||  |||| |||||||| || |||||||||||||||||    
T  43658332 gttcttcacttaatctaatcattgaat-caactttcccatagtaagaaaggattaaccgtttccatgtgaacacacacc 43658255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 44868516 - 44868457
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  44868516 aaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 44868457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 48218766 - 48218829
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  48218766 tcgaaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttagaattt 48218829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 38279458 - 38279408
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  38279458 aactttcccatggtgggaaaggattcacctttcccatgtgaacacacacct 38279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 8427350 - 8427269
Alignment:
Q  70 ttgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaa 151  Q
    ||||||||||||||||||        ||||||||||||||  |||| ||||||||||||||||| |||||||||||||||||    
T  8427350 ttgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcatttaatctaatcattgaa 8427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 47737231 - 47737291
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  47737231 aaaaaaattcagataatttttttttaaaattttgtaattcatttattgaatgttagaattt 47737291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 31014515 - 31014574
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||| ||||||| | |||||||||||||||||||||||||||    
T  31014515 aaaaaaattcagataattttttgttaaattctttaattcatttattgaatgttagaattt 31014574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 38575208 - 38575263
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  38575208 aaaaaaattcagatattttttttttaaattctgtaattcatttattgaatgttaga 38575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 43658403 - 43658462
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||| |||||| |||| |||||||||||||||||||||||||||||    
T  43658403 aaaaaaattcatataattttttttttaattctgtaattcatttattgaatgttagaattt 43658462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 55282022 - 55282081
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||| |||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  55282022 aaaaaaattaagataatttttttttaaattctgtaattcatttgttgaatgttagaattt 55282081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23584415 - 23584476
Alignment:
Q  5 aaaaatattcagataattattttttaaa--ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||||||||| |||||||||  || ||||| |||||||||||||||||||||||    
T  23584415 aaaaatattcagataatttttttttaaaaattttgtaaatcatttattgaatgttagaattt 23584476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23599238 - 23599299
Alignment:
Q  5 aaaaatattcagataattattttttaaa--ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||||||||| |||||||||  || ||||| |||||||||||||||||||||||    
T  23599238 aaaaatattcagataatttttttttaaaaattttgtaaatcatttattgaatgttagaattt 23599299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 29342519 - 29342580
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  29342519 aaaaaaattcagataattttttttttaaaattctgtaattcatttattgaatgttagaattt 29342580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 29342892 - 29342831
Alignment:
Q  5 aaaaatattcagataat--tattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||  | ||||||||||| |||||||||||||||||||||||||||||    
T  29342892 aaaaaaattcagataatatttttttttaaattctgtaattcatttattgaatgttagaattt 29342831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 37374990 - 37375043
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatg 55  Q
    |||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||    
T  37374990 tcgaaaaaaattcatataatttttttttaaattctgtaattcatttattgaatg 37375043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 38575540 - 38575491
Alignment:
Q  15 agataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  38575540 agataattttttttaaaattttgtaattcatttattgaatgttagaattt 38575491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 49752472 - 49752513
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattta 65  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  49752472 ttttttaaattctgtaattcatttattgaatgttagaattta 49752513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 3945073 - 3945129
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  3945073 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttaga 3945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 25025373 - 25025413
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  25025373 ttttttaaattctgtaattcatttattgaatgttagaattt 25025413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 32672682 - 32672626
Alignment:
Q  5 aaaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  32672682 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttaga 32672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 40887464 - 40887516
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgtta 58  Q
    |||| |||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  40887464 aaaaaattcagataattttttttaaaattctgtaattcatttattgaatgtta 40887516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 48219124 - 48219084
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48219124 ttttttaaattctgtaattcatttattgaatgttagaattt 48219084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 8427621 - 8427582
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  8427621 ttttttaaattctgtaattcatttattgaatgttagaatt 8427582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 3945443 - 3945381
Alignment:
Q  3 cgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||||| |||||||||||| ||||| ||| || | |||||||||||||||||||||||||||    
T  3945443 cgaaaaaaattcagataattttttttaaaaattctctaattcatttattgaatgttagaattt 3945381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 19555830 - 19555773
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  19555830 aaaaaaattcagataatttttttttttaaattctgtaattcatttattgaatgttaga 19555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 43104067 - 43104127
Alignment:
Q  4 gaaaaatattcagataat---tattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||| |||||||||||   | ||||||||||| ||||||||||||||||||||||||||    
T  43104067 gaaaaaaattcagataatatattttttttaaattctgtaattcatttattgaatgttagaa 43104127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 46187033 - 46187083
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| |||||| |||| |||| |||||||||||||||||||||||||    
T  46187033 aactttcctatggtgagaaaggattcacctttcccatgtgaacacacacct 46187083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 50687616 - 50687555
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||  ||||| |||| ||||||||||||||||||||||||    
T  50687616 aaaaaaattcagataattttttttttaaaattctgtatttcatttattgaatgttagaattt 50687555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 43658803 - 43658747
Alignment:
Q  6 aaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttaga 60  Q
    |||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  43658803 aaaaaattcagataattttttttttaaaattctgtaattcatttattgaatgttaga 43658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 37374505 - 37374465
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  37374505 ttttttaaattctgtaattcatttattgaatgttataattt 37374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 41875234 - 41875294
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||| || | ||||||||||||| |||||||||||||    
T  41875234 aaaaaaattcagataatttttttttaaaattctttaattcatttattaaatgttagaattt 41875294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 37375369 - 37375310
Alignment:
Q  6 aaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||||||| || ||||| ||| || |||||||||||||||||||||||||||||    
T  37375369 aaaaaattcagatatttttttttaaaaattctgtaattcatttattgaatgttagaattt 37375310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 41875527 - 41875465
Alignment:
Q  2 tcgaaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaat 62  Q
    |||||||| ||||||||| || ||||||  ||||| ||| |||||||||||||||||||||||    
T  41875527 tcgaaaaaaattcagatatttttttttttaaaattctgtcattcatttattgaatgttagaat 41875465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 47737593 - 47737554
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  47737593 ttttttaaatactgtaattcatttattgaatgttagaatt 47737554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 3945449 - 3945527
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcactt 136  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  |||||||| ||||||||||||||||    
T  3945449 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcactt 3945527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 23584755 - 23584721
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  23584755 aaattctgtaattcatttattgaatgttagaattt 23584721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 23599578 - 23599544
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  23599578 aaattctgtaattcatttattgaatgttagaattt 23599544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 192
Target Start/End: Complemental strand, 33454972 - 33454878
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatg 192  Q
    ||||||||||||| |||| ||| ||| ||||||| ||||||||||| | || ||   ||||||| ||||||||||||  |||  |||||||||||    
T  33454972 tagtgttgagagtgcatgataacaatgtgttctttacttaatctaaccgttaaaaaaaactttctcatggtgggaaacaattttcctttcccatg 33454878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 50687182 - 50687136
Alignment:
Q  124 atgttcttcacttaatctaatcattgaatccaactttcccatggtgg 170  Q
    ||||| ||||||||||||||| |||||||||||||||| ||| ||||    
T  50687182 atgttattcacttaatctaattattgaatccaactttctcatagtgg 50687136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Original strand, 53269392 - 53269426
Alignment:
Q  162 ccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| |||||||||||||||||||||    
T  53269392 ccatggtgggaaaggattaacctttcccatgtgaa 53269426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 19555480 - 19555520
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||  | ||||||||||||||||||||||||||    
T  19555480 ttttttaaattcagcaattcatttattgaatgttagaattt 19555520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 42356423 - 42356483
Alignment:
Q  5 aaaaatattcagata-attattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| ||| ||||  ||||| | |||||||||||||||||||||||||||    
T  42356423 aaaaaaattcagatatatttttttaaaaattctataattcatttattgaatgttagaattt 42356483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 4e-54; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 11998602 - 11998455
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11998602 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 11998503  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11998502 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 11998455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 43591153 - 43591006
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  43591153 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaac 43591054  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43591053 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 43591006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 16889777 - 16889915
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16889777 aaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactttcccatg 16889876  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  16889877 gtgggaaatgattaacc-ttcccatgtgaacacacacctt 16889915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 30115936 - 30116083
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||    
T  30115936 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatattctttacttaatctaatcattgaatccaac 30116035  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  30116036 tttcccatggtggaaaaggattaacctttcccatgtgaacacacacct 30116083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 11999020 - 11999158
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  11999020 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttcatctaatcattgaatccaac 11999119  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11999120 tttcccatggtgggaaatgattaacctttcccatgtgaa 11999158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 33114128 - 33114266
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  33114128 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 33114227  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  33114228 tttcccatggtgggaaaggattaacctttcccatgtgaa 33114266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 43481221 - 43481367
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  43481221 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaac 43481320  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||    
T  43481321 tttcccatggtgggaaaggattaacctttttcatgtgaacacacacc 43481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 44062122 - 44061984
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44062122 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 44062023  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    || |||||  ||||||||||| |||||||||||||||||    
T  44062022 gttggaaagtattaacctttctcatgtgaacacacacct 44061984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 7818611 - 7818482
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7818611 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 7818512  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||||||||    
T  7818511 gtgggaaaggattaacctttcccatgtgaa 7818482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 16889341 - 16889203
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  16889341 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgataagaatatgttcttcacttaatctaatcattgaatccaac 16889242  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  16889241 tttcccatggtgggaaaagattaacctttcccatgtgaa 16889203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 38778302 - 38778172
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  38778302 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 38778203  T
Q  156 actttcccatggtgggaaatgattaaccttt 186  Q
    |||||||||||||||||||||||||||||||    
T  38778202 actttcccatggtgggaaatgattaaccttt 38778172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 40309440 - 40309578
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  40309440 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 40309539  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||||||||||||||||| | |||||||    
T  40309540 tttcctatggtgggaaatgattaaccttttctatgtgaa 40309578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 7819075 - 7819183
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||    
T  7819075 tctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtga 7819174  T
Q  196 acacacacc 204  Q
    |||||||||    
T  7819175 acacacacc 7819183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 67 - 194
Target Start/End: Complemental strand, 33113712 - 33113585
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33113712 aaattgttggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactttcccatg 33113613  T
Q  167 gtgggaaatgattaacctttcccatgtg 194  Q
    ||||||||||||||| ||||||||||||    
T  33113612 gtgggaaatgattaatctttcccatgtg 33113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 39852291 - 39852162
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39852291 aaattgttggaagatagtgtgaaaaaaaatctagtgttgagggagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatg 39852192  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||| ||||    
T  39852191 gtgggaaaggattaacctttcccatttgaa 39852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 35237407 - 35237267
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||||||        | |||| |||| ||  ||||||||||||||||| ||||||||||||||||||||||||||    
T  35237407 ttagaattttaaaattgttgaaagatagtgtgaagaaaaatttagtattgaaagagcatgttaagaatatgttattcacttaatctaatcattgaatcca 35237308  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  35237307 actttcccatggtgggaaaggattaacctttcccatgtgaa 35237267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 16880496 - 16880599
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||    
T  16880496 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtga 16880595  T
Q  196 acac 199  Q
    ||||    
T  16880596 acac 16880599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 36848141 - 36848285
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  36848141 agaatttttaaattgttggaaaatagtgtgaagaaaaatctagtgttgaga----atgttaagaatatgttcttcacttaatctaatcattgaatccaac 36848236  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||| ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  36848237 ttttccatggtggaaaaggattaagctttcccatgtgaacacacacctt 36848285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 112 - 206
Target Start/End: Complemental strand, 40907690 - 40907597
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  40907690 catgttaagaatatgttcttcacttaatctaatcattgaatc-aactttcccgtggtgggaaaggattaacctttcccatgtgaacacacacctt 40907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 43591556 - 43591694
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| || |||    
T  43591556 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttaagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaac 43591655  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43591656 tttcccatggtgggaaataattaacctttcccatgtgaa 43591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 96 - 205
Target Start/End: Complemental strand, 4373794 - 4373685
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    |||||||||| |||  |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||    
T  4373794 tctagtgttgcgagaacatgttaagaatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgtga 4373695  T
Q  196 acacacacct 205  Q
    ||||||||||    
T  4373694 acacacacct 4373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 39852745 - 39852889
Alignment:
Q  60 aatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 159  Q
    ||||| ||||||||||||||||||||||        ||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||| |||||    
T  39852745 aattttaaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaataattgaatctaactt 39852844  T
Q  160 tcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |   ||||||||||| |||||||||||| ||||||||||||||||    
T  39852845 ttttatggtgggaaaggattaacctttctcatgtgaacacacacc 39852889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 43480724 - 43480624
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||    
T  43480724 tctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtga 43480625  T
Q  196 a 196  Q
    |    
T  43480624 a 43480624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 185
Target Start/End: Complemental strand, 30115504 - 30115386
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30115504 aaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 30115405  T
Q  167 gtgggaaatgattaacctt 185  Q
    |||||||| ||||||||||    
T  30115404 gtgggaaaggattaacctt 30115386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 10806377 - 10806515
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||| || ||||  |||||||||||||||||||| ||||||| ||||||||||||| |||    
T  10806377 agaatttttaaattgttggaagatagtgtgaagaaaaatctagttttaagagagcatgttaagaatatgttctttacttaatttaatcattgaatcaaac 10806476  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  10806477 tttcccatggtaggaaaagattaacctttcccatgtgaa 10806515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 16880034 - 16879896
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        || | | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  16880034 agaatttttaaattgttggaagatagtgtgaagaaaaatcaaatattgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 16879935  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||| | ||||||||||||| |||||||||||||    
T  16879934 tttctcatgataggaaatgattaacttttcccatgtgaa 16879896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 44062536 - 44062666
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||| ||||| |||| ||||||||||||||||||||||||||    
T  44062536 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaataatatattctccacttaatctaatcattgaatccaac 44062635  T
Q  158 tttcccatggtgggaaatgattaacctttcc 188  Q
    ||||||||||||| ||| |||||||||||||    
T  44062636 tttcccatggtggaaaaggattaacctttcc 44062666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 38778773 - 38778881
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||   ||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||||    
T  38778773 tctagtgttgagagagtatgttaaaaatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgtga 38778872  T
Q  196 acacacacc 204  Q
    |||| ||||    
T  38778873 acacccacc 38778881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 2209152 - 2209036
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||| |||    
T  2209152 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatcgaac 2209053  T
Q  158 tttcccatggtgggaaa 174  Q
    |||| ||||||||||||    
T  2209052 tttctcatggtgggaaa 2209036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 4374250 - 4374349
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4374250 aaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 165
Target Start/End: Complemental strand, 10806094 - 10805987
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  10806094 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaac 10805995  T
Q  158 tttcccat 165  Q
    ||||||||    
T  10805994 tttcccat 10805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 4374940 - 4375070
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    |||||||||||||||||||||         ||||||||||| ||  |||||||| |||||||||||||||||||| |||||||||||||||||||| |||    
T  4374940 aaaattgttggaagatagtgtaaagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcacttaatccaatcattgaatccaactttctcat 4375039  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| |||||||| | ||||||||| ||||    
T  4375040 ggtggaaaatgattcatctttcccatatgaa 4375070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 35237865 - 35237947
Alignment:
Q  119 agaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacaca 202  Q
    |||||||||||||||||||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaatc-aacttttctatggtgggaaaggattaacctttcccatgtgaacacaca 35237947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 16880440 - 16880378
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  16880440 tcgaaaaaaattcagatattttttttttaaattatgtaattcatttattgaatgttagaattt 16880378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 4373873 - 4373931
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4373873 aaaaaaattcagataatt-ttttttaaattatgtaattcatttattgaatgttagaattt 4373931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 7818649 - 7818711
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  7818649 tcgaaaaaaattcagataatttttttttaaattctataattcatttattgaatgttagaattt 7818711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 11998991 - 11998929
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  11998991 tcgaaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 11998929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30115895 - 30115839
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  30115895 aaaaaaattcagataattattttttaaattctttaattcatttattgaatgttagaa 30115839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 2209193 - 2209252
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  2209193 aaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 2209252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 43591176 - 43591235
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  43591176 aaaaaaattcagataatttttttttaaattttgtaattcatttattgaatgttaggattt 43591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16889373 - 16889435
Alignment:
Q  5 aaaaatattcagataattattttttaaa--ttatgtaattcatttattgaatgttagaattta 65  Q
    ||||| |||||||||||| |||||||||  || ||||||||||||||||||||||||||||||    
T  16889373 aaaaaaattcagataatttttttttaaaaattctgtaattcatttattgaatgttagaattta 16889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 30115544 - 30115598
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30115544 aaaaaaattcagataatt-ttttttaaattctgtaattcatttattgaatgttaga 30115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 38778713 - 38778653
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||| |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||    
T  38778713 aaaaaaattcagataattttttttttaaaattctgtaattcatttattgaatgttagaatt 38778653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 35237456 - 35237496
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  35237456 ttttttaaattctgtaattcatttattgaatgttagaattt 35237496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 37533323 - 37533363
Alignment:
Q  164 atggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  37533323 atggtgggaaaggattaacctttcccatgtgaacacacacc 37533363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 16889727 - 16889668
Alignment:
Q  6 aaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| |||||| ||||| || ||||||||||||||||||||||||||    
T  16889727 aaaaaattcagataattttttttttaaattctgcaattcatttattgaatgttagaattt 16889668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 33113765 - 33113823
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||    
T  33113765 aaaaaaattcagatattt-tttttaaaattctgtaattcatttattgaatgttagaattt 33113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 33114095 - 33114036
Alignment:
Q  6 aaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| ||||| ||| || |||||||||||||||||||||||||||||    
T  33114095 aaaaaattcagataattgtttttaaaaattctgtaattcatttattgaatgttagaattt 33114036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 40907765 - 40907820
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||| |||||| |||||| |||| |||||||||||||||||||||||||    
T  40907765 aaaaaaattcatataattttttttttaattctgtaattcatttattgaatgttaga 40907820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 4374909 - 4374851
Alignment:
Q  4 gaaaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttagaa 61  Q
    |||||| |||||||||||| |||||| ||||| |||||||||||| |||||||||||||    
T  4374909 gaaaaaaattcagataattttttttttaaattctgtaattcattttttgaatgttagaa 4374851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 43480810 - 43480864
Alignment:
Q  11 attcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||    
T  43480810 attcagataatttttttttaaaattcagtaattcatttattgaatgttagaattt 43480864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 38572330 - 38572233
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||| ||| |||  ||| ||||| | ||||||||| ||||||||||  || ||   |||||||||||||||||||| |||| |||||||||||||    
T  38572330 tctagtgctgacagtgtatgataagattgtgttcttcaattaatctaatggtttaagttaactttcccatggtgggaaaagattgacctttcccatgt 38572233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 39852681 - 39852644
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  39852681 tttttaaaattatgtaattcatttattgaatgttagaa 39852644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 41761848 - 41761807
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  41761848 aactgtcccatggtgggaaaggattaacctttcccatgtgaa 41761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 11998665 - 11998705
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| ||||||||||| |||||||||||||||||    
T  11998665 ttttttaaattttgtaattcattaattgaatgttagaattt 11998705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 43481181 - 43481123
Alignment:
Q  5 aaaaatattcagataattatttttt---aaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||||   ||||| |||||||||||||||||||||||||    
T  43481181 aaaaaaattcagataatttttttttttaaaattctgtaattcatttattgaatgttaga 43481123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 43591500 - 43591460
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  43591500 tttttttaattctgtaattcatttattgaatgttagaattt 43591460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 44062496 - 44062436
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||| || |||| ||||||||||||||||||||||||    
T  44062496 aaaaaaattcagataattttttttaaaaattctgtatttcatttattgaatgttagaattt 44062436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 7819005 - 7818946
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||| ||||||  ||| | |||||||||||||||||||||||||||    
T  7819005 aaaaaaattcatataatttttttttccattctataattcatttattgaatgttagaattt 7818946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 35237783 - 35237725
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||| |||||||| || ||||||||||||| |||||||||||||||    
T  35237783 aaaaaaattcatataatttttttttaa-ttctgtaattcatttaatgaatgttagaattt 35237725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 60
Target Start/End: Original strand, 10806130 - 10806160
Alignment:
Q  30 aaattatgtaattcatttattgaatgttaga 60  Q
    |||||||||||||||||||||||||||||||    
T  10806130 aaattatgtaattcatttattgaatgttaga 10806160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 10806333 - 10806299
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  10806333 aaattctgtaattcatttattgaatgttagaattt 10806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 16880072 - 16880126
Alignment:
Q  11 attcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||| |||| ||||||| | ||||||||||||| |||||||||||||    
T  16880072 attcagataattttttttttaaattctttaattcatttatttaatgttagaattt 16880126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 43433860 - 43433822
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    |||||||||||||||||||||||||  ||||||||||||    
T  43433860 aactttcccatggtgggaaatgattcccctttcccatgt 43433822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 10198333 - 10198236
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||| ||| |||  ||| ||||| | ||||||||| ||||||||||  || ||   |||||||||||||||| ||| |||| |||||||||||||    
T  10198333 tctagtgctgacagtgtatgataagattgtgttcttcaattaatctaatggtttaagttaactttcccatggtggaaaaagattgacctttcccatgt 10198236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 37532617 - 37532584
Alignment:
Q  163 catggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||| |||||||||||||||||||||    
T  37532617 catggtgggaaaggattaacctttcccatgtgaa 37532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 41762515 - 41762556
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| ||||||||||||||| |||||| ||||||||||||||    
T  41762515 aactgtcccatggtgggaaaagattaaactttcccatgtgaa 41762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 40309381 - 40309345
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  40309381 tttttaaaattctgtaattcatttattgaatgttaga 40309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 34853537 - 34853390
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  34853537 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaac 34853438  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34853437 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 34853390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 36682981 - 36682843
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36682981 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 36682882  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36682881 tttcccatggtgggaaatgattaacctttcccatgtgaa 36682843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 36683414 - 36683549
Alignment:
Q  68 aattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatgg 167  Q
    ||||||||||||||||||||        ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36683414 aattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatgg 36683513  T
Q  168 tgggaaatgattaacctttcccatgtgaacacacac 203  Q
    ||||||| ||||||||||||||||||||||||||||    
T  36683514 tgggaaaggattaacctttcccatgtgaacacacac 36683549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 47814575 - 47814721
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  47814575 agaatttttaaattgttggaaaatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 47814674  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  47814675 tttcccatggtgggaaaggattaagctttcccatgtgaacacacacc 47814721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 19816410 - 19816262
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||| |||||||||||        ||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||    
T  19816410 agaatttttaaattgttgaaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttttacacttaatctaatcattgaatccaac 19816311  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19816310 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacctt 19816262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 22275561 - 22275423
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||| ||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22275561 aaattgttagaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatg 22275463  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22275462 gtgggaaatgattaaccttttccatgtgaacacacacctt 22275423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 24043983 - 24044129
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||    
T  24043983 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaataaaac 24044082  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  24044083 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 24044129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 42456465 - 42456603
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||| ||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  42456465 aaattgttggaagatagtgtgaagaaaaatcttgtgttgagagaacatgttaaaaatatgttcttcacttaatgtaatcattgaatccaactttcccatg 42456564  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42456565 gtgggaaaggattaacctttcccatgtgaacacacacct 42456603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 4895022 - 4895160
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  4895022 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaac 4895121  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  4895122 tttcccatggtggaaaatgattaacctttcccatgtgaa 4895160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 47814117 - 47813985
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  47814117 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 47814018  T
Q  158 tttcccatggtgggaaatgattaacctttccca 190  Q
    ||| ||||||||||||| |||||||||||||||    
T  47814017 ttttccatggtgggaaaggattaacctttccca 47813985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 24323922 - 24324068
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||| |        ||||||||| ||||  ||||||||||||||||||||||||||||||||| |||||||||||     
T  24323922 agaatttttaaattgttggaagatagtgagaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaattattgaatccaa- 24324020  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  24324021 tttcccatagtgggaaatgattaacctttcccatgtgaacacacacct 24324068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 4894645 - 4894515
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4894645 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaattcaac 4894546  T
Q  158 tttcccatggtgggaaatgattaacctttcc 188  Q
    ||||||||||||||||| |||||||||||||    
T  4894545 tttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 46814542 - 46814404
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||| |||||| ||  |||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  46814542 aaattgttggaagatagtgtgaagaaaaatctaatgttgaaagagcatgttaagaatatgttcttcacttaatctaatcgttgaattcaactttcccatg 46814443  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  46814442 gtgggaaaggattaacctttcccatgtaaacacacacct 46814404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 22276014 - 22276151
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||||||        ||||||||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||    
T  22276014 ttagaattttaaaattgttgaaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcatttaatctaatcattgaatcca 22276113  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  22276114 actttcccatggtgggaaaggattaacctttcccatgt 22276151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 27855702 - 27855574
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  27855702 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaat-caactttctcatg 27855604  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||||||||||||||    
T  27855603 gtgggaaatgattaacctttcccatgtgaa 27855574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 34853936 - 34854074
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||    
T  34853936 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaac 34854035  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  34854036 tttcctatggtgggaaaggattaacctttcccatgtgaa 34854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 42456058 - 42455929
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||| |||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||| |||||| ||    
T  42456058 aaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaattttcccgtg 42455959  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||||||||    
T  42455958 gtgggaaaggattaacctttcccatgtgaa 42455929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 19816832 - 19816970
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  |||||||| |||||||||||||||||||||||||||| ||||||||    
T  19816832 agaatttttaaattgttggaatatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcatttaatccaac 19816931  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| ||| |||||||||||||||| ||||    
T  19816932 tttcccatggtggaaaaggattaacctttcccatatgaa 19816970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 30711934 - 30711792
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||| ||||||||||||        |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30711934 agaatttttaaattgttagaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaac 30711835  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacaca 200  Q
    ||| |||||||||||||  |||||||||| |||||||||||||    
T  30711834 ttttccatggtgggaaaaaattaaccttttccatgtgaacaca 30711792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 46732713 - 46732575
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||    
T  46732713 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagaatgttaagaatatgttattcacttaatctaatcattgaatccaac 46732614  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| |||| ||||||||  ||||||||||||||||||||    
T  46732613 ttttccatagtgggaaagaattaacctttcccatgtgaa 46732575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 188
Target Start/End: Original strand, 46815002 - 46815132
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||||         |||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  46815002 agaatttttaaattgttggaagatagtgttaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaac 46815101  T
Q  158 tttcccatggtgggaaatgattaacctttcc 188  Q
    |||||||||||||||||| |||||| |||||    
T  46815102 tttcccatggtgggaaataattaacttttcc 46815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 33806107 - 33805977
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    |||||||||||||||||||| |        ||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  33806107 aaaattgttggaagatagtgcgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaacttttccat 33806008  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||   ||||||||||||||    
T  33806007 ggtggaaaatgattggtctttcccatgtgaa 33805977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 32499395 - 32499287
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  32499395 agaatttttaaatttttggaagatagtgtgatgaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 32499296  T
Q  158 tttcccatg 166  Q
    |||||||||    
T  32499295 tttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 32499813 - 32499928
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  32499813 agaatttttaaattgttggaagatagtgtgaaaaaaa-tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 32499911  T
Q  158 tttcccatggtgggaaa 174  Q
    |||||| | ||||||||    
T  32499912 tttcccgttgtgggaaa 32499928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 18521005 - 18520899
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18521005 ttagaattttaaaattgttgaaagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatcca 18520906  T
Q  156 actttcc 162  Q
    |||||||    
T  18520905 actttcc 18520899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 36620718 - 36620820
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||   |||   ||| ||||||||||||||| ||||||||    
T  36620718 tctagtgttgagtgagcatgttaataatatgttcttcacttaatctaatcattgaatccaact---cca---tggaaaatgattaaccttttccatgtga 36620811  T
Q  196 acacacacc 204  Q
    |||||||||    
T  36620812 acacacacc 36620820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 27856121 - 27856217
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||             ||||||| ||||||||||||||||||||||||||||||||||    
T  27856121 tctagtgttgagagaacatgttaagaatatgttcttcacttaatc-------------caacttttccatggtgggaaatgattaacctttcccatgtga 27856207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 36620264 - 36620126
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||| ||  |||||||| |||||||| |||||||||| |||||||||||| ||||    
T  36620264 agaatttttaaattgttggaagatattgtgaaaaaaaatctagtgttgaaagagcatgttaataatatgtttttcacttaatttaatcattgaattcaac 36620165  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||| | | ||| |||||||||||||||| ||||    
T  36620164 tttctcatgatagaaaaagattaacctttcccatatgaa 36620126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 34853569 - 34853628
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  34853569 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 34853628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27855740 - 27855802
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  27855740 tcgaaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 27855802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 46012919 - 46012978
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaa 156  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  46012919 tctagtgttgagagagcatgttaa-aatatgttcttcacttaatctaatcattgaatccaa 46012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 24323890 - 24323831
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  24323890 aaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 24323831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 4894993 - 4894932
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| |||||||| || |||||||||||||||||||||||||||||    
T  4894993 tcgaaaaaaattcagataatttttttttaa-ttctgtaattcatttattgaatgttagaattt 4894932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 27856042 - 27855982
Alignment:
Q  5 aaaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  27856042 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttagaattt 27855982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 36683022 - 36683082
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  36683022 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttagaattt 36683082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 4894679 - 4894738
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||  || ||||||||||| |||||||||||||||||||||||||||||    
T  4894679 aaaaaaattcagattttttttttttaaattctgtaattcatttattgaatgttagaattt 4894738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 33806145 - 33806204
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||||||    
T  33806145 tcgaaaaaaattcagatatttttttttaaaattctgtaattcatttattgaatgttagaa 33806204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 22275984 - 22275926
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||||||  || ||||||||||| |||||||||||||||||||||||||||||    
T  22275984 aaaaaattcagattttttttttttaaattctgtaattcatttattgaatgttagaattt 22275926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 36620639 - 36620578
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  36620639 aaaaaaattcagataatttttttttttaaattctgtaattcatttattgaatgttagaattt 36620578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 84426 - 84377
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  84426 aactttcccatagtgggaaaggattcacctttcccatgtgaacacacacc 84377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 24043944 - 24043892
Alignment:
Q  13 tcagataattattt-tttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  24043944 tcagataattttttctttaaattctgtaattcatttattgaatgttagaattt 24043892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 46012839 - 46012787
Alignment:
Q  12 ttcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| || ||||||||||| ||||||||||||||| |||||||||||||    
T  46012839 ttcagatattttttttttaaattctgtaattcatttattaaatgttagaattt 46012787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 46732777 - 46732817
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  46732777 ttttttaaattctgtaattcatttattgaatgttagaattt 46732817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 46814606 - 46814646
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  46814606 ttttttaaattttgtaattcatttattgaatgttagaattt 46814646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 32499442 - 32499492
Alignment:
Q  15 agataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  32499442 agataatttttttttaaaattctgtaattcatttattgaatgttagaattt 32499492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 32499746 - 32499706
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  32499746 tttttaaaattctgtaattcatttattgaatgttagaattt 32499706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 34853879 - 34853839
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  34853879 tttttttaattctgtaattcatttattgaatgttagaattt 34853839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 36620318 - 36620358
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  36620318 ttttttaaattctgtaattcatttattcaatgttagaattt 36620358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 36683353 - 36683313
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  36683353 tttttaaaattttgtaattcatttattgaatgttagaattt 36683313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 42456391 - 42456351
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  42456391 tttttaaaattctgtaattcatttattgaatgttagaattt 42456351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 30711956 - 30712010
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||| |||||| |||||||| || |||||||||||||||||||||||||    
T  30711956 aaaaaaattcatataatttttttttaa-ttctgtaattcatttattgaatgttaga 30712010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 33806602 - 33806645
Alignment:
Q  153 ccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  33806602 ccaactttccaatggtgggaaaggattgacctttcccatgtgaa 33806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 19816784 - 19816730
Alignment:
Q  11 attcagataattatttttt-aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||| |||||| |||||  || |||||||||||||||||||||||||    
T  19816784 attcagataattttttttttaaattcagttattcatttattgaatgttagaattt 19816730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 42456103 - 42456137
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  42456103 aaattctgtaattcatttattgaatgttagaattt 42456137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 47814517 - 47814483
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  47814517 aaattttgtaattcatttattgaatgttagaattt 47814483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 85086 - 85127
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||| ||||||||||||| |||| ||||||||||||||||    
T  85086 aacttttccatggtgggaaaggattcacctttcccatgtgaa 85127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 18521353 - 18521317
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    |||||| |||| |||||||||||||||||||||||||    
T  18521353 tttttttaattctgtaattcatttattgaatgttaga 18521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 19816462 - 19816498
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  19816462 tttttaaaattctgtaattcatttattgaatgttaga 19816498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 20075671 - 20075524
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20075671 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 20075572  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20075571 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 20075524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 52597636 - 52597489
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  52597636 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaac 52597537  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52597536 tttcccatggtgggaaaagattaacctttcccatgtgaacacacacct 52597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 36945163 - 36945309
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36945163 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 36945262  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  36945263 tttcccatggtggaaaaggattaacctttcccatgtgaacacacacc 36945309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 48782023 - 48782161
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48782023 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48782122  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  48782123 gtgcgaaatgattaacctttcccatgtgaacacacacct 48782161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 55816390 - 55816536
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  55816390 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 55816489  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  55816490 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 55816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 389343 - 389491
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||    
T  389343 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcactgaatcca 389442  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  389443 acttttccatggtgggaaaggattaacctttcccatgtgaacacacacc 389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 199145 - 198998
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||    
T  199145 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatttaac 199046  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  199045 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 198998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 2713781 - 2713921
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        |||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2713781 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 2713880  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  2713881 acttttccatggtgggaaaggattaacctttcccatgtgaa 2713921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 32902405 - 32902552
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  32902405 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaac 32902504  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||||    
T  32902505 tttcccatggtgggaaaatattaacctttctcatgtgaacacacacct 32902552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 36111157 - 36111303
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||     
T  36111157 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgtttagagaatatgttaagaatatgttcttcacttaatctaatcattgaatccaa- 36111255  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36111256 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 36111303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 40345070 - 40345217
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||| |||    
T  40345070 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaccatattaaaaatatgttcttcacttaatctaatcattgaatctaac 40345169  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||    
T  40345170 tttcccattgtgggaaaagattaacctttcccatgtgaacacacacct 40345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 31876934 - 31876796
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  31876934 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 31876835  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||| ||| |||||||||||||||||||||    
T  31876834 ttttccatggtggaaaaggattaacctttcccatgtgaa 31876796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 32291161 - 32291023
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||| |||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  32291161 agaatttttaaattgttgaaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 32291062  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  32291061 tttcccatgattggaaatgattaacctttcccatgtgaa 32291023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 48091035 - 48091173
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||| |||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  48091035 agaatttttaaattgttggatgatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 48091134  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  48091135 tttcccatggtgggaaaagattaacctttcccatatgaa 48091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 25369891 - 25369786
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  25369891 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtga 25369792  T
Q  196 acacac 201  Q
    ||||||    
T  25369791 acacac 25369786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 25370330 - 25370467
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  || ||||||||||||||||||        |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  25370330 ttagaatttttaagttgttggaagatagtgtgaagaaaaatctagttttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 25370429  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25370430 actttcccatggtgggaaaggattaacctttcccatgt 25370467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 12640073 - 12639973
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12640073 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtga 12639974  T
Q  196 a 196  Q
    |    
T  12639973 a 12639973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 40848111 - 40848218
Alignment:
Q  99 agtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaca 198  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||||||||    
T  40848111 agtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgtgaaca 40848210  T
Q  199 cacacctt 206  Q
    ||||||||    
T  40848211 cacacctt 40848218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 388899 - 388761
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||    
T  388899 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaac 388800  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  388799 tttcccatggtgggaaaggattaacctttcccatgtgaa 388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 12640566 - 12640672
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaac 197  Q
    ||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  12640566 tagtgttgagagaacatgttaaaaatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaac 12640665  T
Q  198 acacacc 204  Q
    |||||||    
T  12640666 acacacc 12640672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 37567423 - 37567552
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37567423 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatg 37567522  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||  ||||||||||||||||||||    
T  37567523 gtggaaaagtattaacctttcccatgtgaa 37567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 199220 - 199304
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  199220 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 70 - 202
Target Start/End: Complemental strand, 28223697 - 28223565
Alignment:
Q  70 ttgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtg 169  Q
    ||||||||||||||||||        ||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |    
T  28223697 ttgttggaagatagtgtgaagaaaaatctagtgttgagagagcgtgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatagag 28223598  T
Q  170 ggaaatgattaacctttcccatgtgaacacaca 202  Q
    ||||| |||||||||||||||||||||||||||    
T  28223597 ggaaaagattaacctttcccatgtgaacacaca 28223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 20422671 - 20422809
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20422671 agaatttttaaattgttggaatatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 20422770  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||| ||| |||||| ||||||||||||||    
T  20422771 ttttccatggtggaaaaggattaagctttcccatgtgaa 20422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 35427391 - 35427246
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||| ||||||||||||        ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  35427391 agaatttttaaattgttcgaagatagtgtgaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa- 35427293  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||    
T  35427292 tttcccatggcggaaaaggattaacctttcccatgtgaacacacacc 35427246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 55815971 - 55815833
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||||||||    
T  55815971 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttaagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaac 55815872  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  55815871 tttcccatagtgggaaaggattaacctttcccatgtgaa 55815833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 26424353 - 26424482
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26424353 aaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 26424452  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||  | ||||||||||||||||||    
T  26424453 gtggaaaagaactaacctttcccatgtgaa 26424482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 52597660 - 52597789
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52597660 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcctatg 52597759  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||  ||| |||||||||||||||||||||    
T  52597760 gtgaaaaaggattaacctttcccatgtgaa 52597789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 20422274 - 20422131
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||| |        ||||||||||||||  ||||||||||||||||||   ||||||||||||||||||||| | |    
T  20422274 agaatttttaaattgttggaagatagtgcgaagaaaaatctagtgttgagagagcatgttaagaatatgttc---acttaatctaatcattgaatctacc 20422178  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20422177 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 20422131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 33569858 - 33569728
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        ||||||||||| ||  |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  33569858 aaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttgagaatatgttcttcacttaatctaattattgaatccaacttttccat 33569759  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| |||| ||||||||||||||||    
T  33569758 ggtgggaaaggattgacctttcccatgtgaa 33569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 26423844 - 26423759
Alignment:
Q  119 agaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaacacacacc 26423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 48090551 - 48090466
Alignment:
Q  119 agaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgtgaacacacacc 48090466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 40847769 - 40847685
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||    
T  40847769 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaa 40847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 32901997 - 32901859
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||    
T  32901997 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagaaagcatgttaagaatatgttctttacttaatctaatcattgaatccaac 32901898  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| ||| ||| | | |||||||||||||    
T  32901897 tttcccatggtggaaaaggataatcttttcccatgtgaa 32901859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 36944756 - 36944618
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  36944756 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 36944657  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||| ||| |||||||||||| | ||||||    
T  36944656 ttttccatggtggaaaaagattaacctttcacgtgtgaa 36944618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 31842663 - 31842791
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        || |||||||||||  |||||||| |||||||||||||||||||||||||||||||||| ||    
T  31842663 agaatttttaaattgttggaagatagtgtgaagaaaaatccagtgttgagagaacatgttaataatatgttcttcacttaatctaatcattgaatcc-ac 31842761  T
Q  158 tttcccatggtgggaaatgattaacctttc 187  Q
    ||||||||||| ||||||||||||||||||    
T  31842762 tttcccatggttggaaatgattaacctttc 31842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 29809065 - 29809165
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||||| |||    
T  29809065 tctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatga 29809164  T
Q  196 a 196  Q
    |    
T  29809165 a 29809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 3708919 - 3708779
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||| |||||||||||        ||||||| ||||||  |||| ||||| ||||||||| |||||||||||||||||||||||||    
T  3708919 agaatttttaaattgttgaaagatagtgtgaagaaaaatctagtgctgagagaacatgataagagtatgttctttacttaatctaatcattgaatccaac 3708820  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||      |||||||||||||||||||||||||||||    
T  3708819 tttcccatggtg------gattaacctttcccatgtgaacacacacc 3708779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 6862753 - 6862655
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | ||| |||| |||||||| |||||||    
T  6862753 tagtgttgaaagtgcatgttaagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaagattgacctttcctatgtgaa 6862655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 40344649 - 40344511
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||| ||||  ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  40344649 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaataatttaatccaac 40344550  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||| || |||| |||||| ||||||||| ||||    
T  40344549 tttctcatgatgagaaaggattaaactttcccatatgaa 40344511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 20076126 - 20076229
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20076126 agaatttttaaattgttggaagatagtgtgaagaaaaatctagagttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 20076225  T
Q  158 tttc 161  Q
    ||||    
T  20076226 tttc 20076229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 31877372 - 31877519
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        |||||||||||||   |||||||| |||||||||||||||||||||||||||| ||||||||    
T  31877372 agaatttttaaattgttggaaaatagtgtgaagaaaaatctagtgttgagataacatgttaaaaatatgttcttcacttaatctaatcattaaatccaac 31877471  T
Q  158 tttcccatggtgggaaatgatt-aacctttcccatgtgaacacacacc 204  Q
    |||||||| |||  ||| |||| ||| ||| |||||||||||||||||    
T  31877472 tttcccatagtgaaaaaggattaaactttttccatgtgaacacacacc 31877519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 40344682 - 40344741
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  40344682 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 40344741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 37567011 - 37566941
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| || |||| ||||    
T  37567011 tctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatctaattttctcatg 37566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 40847840 - 40847903
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  40847840 tcgaaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttagaattt 40847903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 47321836 - 47321767
Alignment:
Q  127 ttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||||| ||||||||||| |||| |||  ||| |||||||||||||||| ||||    
T  47321836 ttcttcacttaatctaatcattaaatccaacttttccatagtgataaaggattaacctttcccatatgaa 47321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 47328397 - 47328466
Alignment:
Q  119 agaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcc 188  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||| || ||||| ||| |||||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatctaacttttccatagtaggaaaagatgaacctttcc 47328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 52869496 - 52869447
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  52869496 aactttcccatggtgggaaaggattcacctttcccatgtgaacacacacc 52869447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 32902372 - 32902312
Alignment:
Q  5 aaaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  32902372 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttagaattt 32902312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 48781574 - 48781526
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 160  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  48781574 catgttaagaatatattcatcacttaatctaatcattgaatccaacttt 48781526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 20422314 - 20422365
Alignment:
Q  13 tcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| | ||||||||| |||||||||||||||||||||||||||||    
T  20422314 tcagataattttcttttaaattctgtaattcatttattgaatgttagaattt 20422365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 35427423 - 35427481
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  35427423 aaaaaaattcagatattt-ttttttaaattctgtaattcatttattgaatgttagaattt 35427481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 36944785 - 36944848
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| || || ||||||||||||||||||||||||||    
T  36944785 tcgaaaaaaattcagataatttttttttaaaattctgcaattcatttattgaatgttagaattt 36944848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 40345055 - 40344996
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||    
T  40345055 aaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgtcagaattt 40344996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 388928 - 388990
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||||||||| || | ||||||||| | |||||||||||||||||||||||||||    
T  388928 tcgaaaaaaattcagatatttttattttaaattctataattcatttattgaatgttagaattt 388990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 3221424 - 3221474
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  3221424 aactttcccatcgtgggaaaggattcacctttcccatgtgaacacacacct 3221474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 40848038 - 40847977
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  40848038 aaaaaaattcagataattttttttttaaaattctgtaattcatttattgaatgttagaattt 40847977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 55816000 - 55816062
Alignment:
Q  2 tcgaaaaatattcagataa-ttattttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    |||||||| |||||||||| || |||||||||||  |||||||||||||||||||||||||||    
T  55816000 tcgaaaaaaattcagataaatttttttttaaattcagtaattcatttattgaatgttagaatt 55816062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6862828 - 6862885
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| |||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  6862828 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttagaa 6862885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 32291213 - 32291262
Alignment:
Q  15 agataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  32291213 agatattttttttttaaattctgtaattcatttattgaatgttagaattt 32291262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 35427793 - 35427729
Alignment:
Q  2 tcgaaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||||| |||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  35427793 tcgaaaaaaattcacataattttttttttaaaattctgtaattcatttattgaatgttagaattt 35427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 12640494 - 12640434
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||| || |||||||||||||||||||||||||||||    
T  12640494 aaaaaaattcagataattttttttaaaaattctgtaattcatttattgaatgttagaattt 12640434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 32902029 - 32902085
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  32902029 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttaga 32902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 36111107 - 36111067
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  36111107 ttttttaaattctgtaattcatttattgaatgttagaattt 36111067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 37567061 - 37567101
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  37567061 ttttttaaattctgtaattcatttattgaatgttagaattt 37567101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48781656 - 48781719
Alignment:
Q  1 gtcgaaaaatattcagataattatttt--ttaaattatgtaattcatttattgaatgttagaat 62  Q
    |||||||||  ||||||||||| ||||  ||||||| |||||||||||||||||||||||||||    
T  48781656 gtcgaaaaaatttcagataatttttttttttaaattctgtaattcatttattgaatgttagaat 48781719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 48781961 - 48781921
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  48781961 ttttttaaattctgtaattcatttattgaatgttagaattt 48781921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 48091003 - 48090945
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  48091003 aaaaaaattcagttaatt-tttttaaaattctgtaattcatttattgaatgttagaattt 48090945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 3708951 - 3709009
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaat 62  Q
    ||||| |||||||||||| ||||||||| || || ||||||||||||||||||||||||    
T  3708951 aaaaaaattcagataatttttttttaaaattctgaaattcatttattgaatgttagaat 3709009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 20075712 - 20075769
Alignment:
Q  5 aaaaatattcagataattatttt--ttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||  ||||||| |||||||||||||||||||||||||    
T  20075712 aaaaaaattcagataatttttttttttaaattctgtaattcatttattgaatgttaga 20075769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 37567365 - 37567324
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattta 65  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  37567365 ttttttaaattcagtaattcatttattgaatgttagaattta 37567324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 3709301 - 3709265
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3709301 ttttttaaattctgtaattcatttattgaatgttaga 3709265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 12640143 - 12640191
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaa 53  Q
    ||||| ||||||||| || ||||||||||| ||||||||||||||||||    
T  12640143 aaaaaaattcagatattttttttttaaattctgtaattcatttattgaa 12640191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 20076085 - 20076023
Alignment:
Q  5 aaaaatattcagataa---ttattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||||   || ||||||||||| || ||||||||||||||||||||||||||    
T  20076085 aaaaaaattcagataattttttttttttaaattctgcaattcatttattgaatgttagaattt 20076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 20422619 - 20422579
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  20422619 tttttaaaattctgtaattcatttattgaatgttagaattt 20422579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 35428238 - 35428278
Alignment:
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaa 35428278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 48090641 - 48090681
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  48090641 ttttttaaattctataattcatttattgaatgttagaattt 48090681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 55816330 - 55816290
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  55816330 tttttttaattctgtaattcatttattgaatgttagaattt 55816290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 25369961 - 25370020
Alignment:
Q  6 aaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||| |||||| ||||| ||| || |||||||||||||||||||||||||||||    
T  25369961 aaaaaattcaaataattttttttaaaaattctgtaattcatttattgaatgttagaattt 25370020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26423935 - 26423993
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| |||||||||||| ||||||  ||||| | ||||||||||||||||||||||||    
T  26423935 aaaaaaattcagataattttttttttaaaattctttaattcatttattgaatgttagaa 26423993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 26424313 - 26424259
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||| ||||| ||||||||| |||||||||||||||    
T  26424313 aaaaaaattcagataatt-tttttaaaattctgtaattcaattattgaatgttaga 26424259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 196
Target Start/End: Complemental strand, 18501781 - 18501747
Alignment:
Q  162 ccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| |||||||||||||||||||||    
T  18501781 ccatggtgggaaaggattaacctttcccatgtgaa 18501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 28223758 - 28223792
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  28223758 aaattctgtaattcatttattgaatgttagaattt 28223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 35428208 - 35428237
Alignment:
Q  136 taatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||||||||||    
T  35428208 taatctaatcattgaatccaactttcccat 35428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 389303 - 389243
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||| | | ||||||| || ||||||||||||||| |||||||||||||    
T  389303 aaaaaaattcagataactttcttttaaaattctgtaattcatttattaaatgttagaattt 389243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 62
Target Start/End: Complemental strand, 31877323 - 31877291
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaat 62  Q
    ||||| |||||||||||||||||||||||||||    
T  31877323 aaattctgtaattcatttattgaatgttagaat 31877291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 36945105 - 36945073
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgt 56  Q
    ||||||||||| |||||||||||||||||||||    
T  36945105 ttttttaaattctgtaattcatttattgaatgt 36945073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 45778733 - 45778765
Alignment:
Q  164 atggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||| |||||||||||||||||||||    
T  45778733 atggtgggaaaggattaacctttcccatgtgaa 45778765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 52722080 - 52722159
Alignment:
Q  125 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||| ||||||||||  || ||   |||||||| ||| ||| ||| ||||||||||||||||||||||| ||||||    
T  52722080 tgttcttcaattaatctaatggttaaagttaactttcc-atgatggaaaaggattaacctttcccatgtgaacaaacacct 52722159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 4e-51; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 28224328 - 28224474
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    ||||||| ||||||||||||||||||||||        | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  28224328 agaattttaaaattgttggaagatagtgtgaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 28224427  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  28224428 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 28224474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 39477263 - 39477408
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39477263 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 39477362  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacac 201  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  39477363 actttcccatggtgggaaatgattaacctttcccatatgaacacac 39477408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 60 - 206
Target Start/End: Complemental strand, 16887727 - 16887581
Alignment:
Q  60 aatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 159  Q
    |||||| |||||||||||||||||||||        ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||     
T  16887727 aatttataaattgttggaagatagtgtgaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaacta 16887628  T
Q  160 tcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16887627 tcccatggtgggaaaggattaacctttcccatgtgaacacacacctt 16887581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 11256264 - 11256115
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  11256264 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 11256165  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  11256164 actttaccatggtgagaaatgattaacctttcccatgtgaacacatacct 11256115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 56 - 204
Target Start/End: Complemental strand, 3595394 - 3595246
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  3595394 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcactttatctaatcattgaatcca 3595295  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3595294 actttcccatggtgggaaagaattaacctttcccatgtgaacacacacc 3595246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 6849434 - 6849287
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||| |||||||||||        ||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  6849434 agaatttttaaattgttgaaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaac 6849335  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6849334 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacct 6849287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 67 - 201
Target Start/End: Complemental strand, 10883424 - 10883290
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10883424 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatg 10883325  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacac 201  Q
    |||||||| ||||||||||||||||||||||||||    
T  10883324 gtgggaaaggattaacctttcccatgtgaacacac 10883290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 4386900 - 4387038
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  4386900 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 4386999  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  4387000 tttcccatggtgggaaaggattaacctttcccatgtgaa 4387038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 9224403 - 9224274
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||| ||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224403 aaattgttggaagataatgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 9224304  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||||||||    
T  9224303 gtgggaaaggattaacctttcccatgtgaa 9224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 16571255 - 16571126
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16571255 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaactttcccatg 16571156  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||||||||||||||||||||    
T  16571155 gtgggaaaggattaacctttcccatgtgaa 16571126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 20244111 - 20244249
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  20244111 agaatttttaaattgttggaagatagtgtgaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 20244210  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  20244211 ttttccatggtgggaaaggattaacctttcccatgtgaa 20244249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 28223934 - 28223796
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  28223934 agaatttttaaattattggaagatagtgtgacgaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 28223835  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  28223834 tttcctatggtgggaaaggattaacctttcccatgtgaa 28223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 56 - 205
Target Start/End: Complemental strand, 7583280 - 7583131
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||    
T  7583280 ttagaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacctaatctaatcattgaatcca 7583181  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    | |||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  7583180 attttctcatggtgggaaaggattaacctttccgatgtgaacacacacct 7583131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 7583731 - 7583871
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||| ||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  7583731 ttagaatttttaaattgttagaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaagctaatcattgaatcca 7583830  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  7583831 actttcccatagtgggaaaagattaacctttcccatgtgaa 7583871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 7717234 - 7717370
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||| ||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  7717234 aaattgttagaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatataatcattgaat-caactttcccatg 7717332  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||| |||| |||||||||||||||||||||||||||||    
T  7717333 gtgagaaaggattaacctttcccatgtgaacacacacc 7717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 16571704 - 16571813
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    |||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  16571704 tctaatgttgagagagcatgttaagaatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgtga 16571803  T
Q  196 acacacacct 205  Q
    ||||||||||    
T  16571804 acacacacct 16571813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 7716779 - 7716679
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  7716779 tctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtga 7716680  T
Q  196 a 196  Q
    |    
T  7716679 a 7716679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 11256680 - 11256815
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  11256680 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaac 11256779  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgt 193  Q
    |||| |||||||| ||||||||||||||| ||||||    
T  11256780 tttctcatggtggaaaatgattaaccttttccatgt 11256815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 8113240 - 8113378
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        ||||||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||||    
T  8113240 agaatttttaaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacataatctaatcatcgaatccaac 8113339  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  8113340 tttcccatggtggaaaaggattaacctttcccatgtgaa 8113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 39476661 - 39476534
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||    
T  39476661 agaattttaaaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatattcttcacttaatctaatcattgaattaaac 39476562  T
Q  158 tttcccatggtgggaaatgattaacctt 185  Q
    |||||||| |||||||| ||||||||||    
T  39476561 tttcccatagtgggaaaggattaacctt 39476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 6849520 - 6849617
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  6849520 tctagtgttaagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgt 6849617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 8112814 - 8112679
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  |||||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  8112814 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaaaaatatgttc---acttaatctaatcattgaatccaactttcccatg 8112718  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||| |||| ||||||| |||| |||||||||||||||||    
T  8112717 gtgagaaaggattaacatttctcatgtgaacacacacct 8112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 3595835 - 3595973
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  3595835 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaac 3595934  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||| ||  ||| ||||||| |||||||||||||    
T  3595935 ttttccatgatgaaaaaggattaacatttcccatgtgaa 3595973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 8963650 - 8963512
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    ||||||| ||||||||||||||||| |||         ||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||    
T  8963650 agaattttaaaattgttggaagataatgtaaagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaac 8963551  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| | | ||| |||||||||||||||||||||    
T  8963550 tttcccatgatagaaaaggattaacctttcccatgtgaa 8963512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 40166837 - 40166930
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  40166837 catgttaaaaatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgtgagcacacacct 40166930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 20243699 - 20243583
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||| |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  20243699 agaatttttaaattgttggaagatagtgtgaagaaaaatctaatgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaac 20243600  T
Q  158 tttcccatggtgggaaa 174  Q
    |||||||||||||||||    
T  20243599 tttcccatggtgggaaa 20243583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 33848011 - 33847881
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        | ||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  33848011 aaaattgttggaagatagtgtgaagaaaaatatagtgttgagagagcatgttaagaatatgttcttcacttaatctaattgttgaatccatctttcccat 33847912  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||| ||||  |||||||||||||||    
T  33847911 ggtggaaaaggattggcctttcccatgtgaa 33847881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 40165979 - 40165881
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  40165979 tagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaaatgattggtctttcccatgtgaa 40165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 16903067 - 16903164
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||||| ||  |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  16903067 tctagtgttgaaagagcatgttaaaaatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccatgt 16903164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 467251 - 467139
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||| |||||||||        ||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  467251 agaatttttaaattgttggatgatagtgtgaagaaaaatctagtgttgagagaccatgttaagaatatgttcttcacttaatttaatcattgaatccaac 467152  T
Q  158 tttcccatggtgg 170  Q
    |||||||||||||    
T  467151 tttcccatggtgg 467139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 113 - 196
Target Start/End: Complemental strand, 30162024 - 30161941
Alignment:
Q  113 atgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||| |||||    
T  30162024 atgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttcccacgtgaa 30161941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 17918167 - 17918019
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||| |||||||||||        ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||| |||    
T  17918167 agaatttttaaattgttgaaagatagtgtgaataaaaatctagtgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatctaac 17918068  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||| ||||   |  ||| |||||||||||| ||||| ||||||||||||    
T  17918067 ttttccataaagaaaaaggattaacctttctcatgtaaacacacacctt 17918019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 4386422 - 4386353
Alignment:
Q  137 aatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  4386422 aatctaatcattgaatccaactttcctatggtgggaaagtattaacctttcccatgtgaacacacacctt 4386353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 467326 - 467430
Alignment:
Q  103 ttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaaccttt--cccatgtgaacaca 200  Q
    |||||||  |||||||||||||||||||||||||||| |||| ||||||| |||||||  || ||||| |||||||||||||||  |||| |||||||||    
T  467326 ttgagagaacatgttaagaatatgttcttcacttaatttaattattgaattcaactttttcacggtggaaaatgattaacctttcccccacgtgaacaca 467425  T
Q  201 cacct 205  Q
    |||||    
T  467426 cacct 467430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 17918625 - 17918720
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatc 153  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  17918625 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 17918584 - 17918525
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  17918584 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 17918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 28224285 - 28224226
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  28224285 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 28224226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 40166748 - 40166693
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40166748 aaaaaaattcagataatttttttttaaattatgtaattcatttattgaatgttaga 40166693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 39477224 - 39477166
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  39477224 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaatt 39477166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 8112855 - 8112914
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  8112855 aaaaaaattcagataattttttttaaaattctgtaattcatttattgaatgttagaattt 8112914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 11256639 - 11256580
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| || ||||||||||||||||||||||||||    
T  11256639 aaaaaaattcagataatttttttttaaattctgcaattcatttattgaatgttagaattt 11256580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 16571634 - 16571575
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||| ||||||    
T  16571634 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttggaattt 16571575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 20244082 - 20244019
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  20244082 tcgaaaaaaattcagataatttttttttaaaattatgtaattcatttcttgaatgttagaattt 20244019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 28223963 - 28224026
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  28223963 tcgaaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttagaattt 28224026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 3595812 - 3595754
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  3595812 aaaaaattcagatattttttttttaaattctgtaattcatttattgaatgttagaattt 3595754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 7583307 - 7583371
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa--ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| |||||||||  || |||||||||||||||||||||||||||||    
T  7583307 tcgaaaaaaattcagataatttttttttaaaaattctgtaattcatttattgaatgttagaattt 7583371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 3595433 - 3595491
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||| |||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||    
T  3595433 aaaaaaattcagataattttttttaaaattctgtaatttatttattgaatgttagaatt 3595491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 7583697 - 7583637
Alignment:
Q  5 aaaaatattcagataat-tattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||    
T  7583697 aaaaaaattcagataatattttttttaaattctgtaattcatttattgattgttagaattt 7583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 12207306 - 12207246
Alignment:
Q  2 tcgaaaaatattcagataa-ttattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| |||||||||| || |||||| |||||||||||| ||||||||||||||||||    
T  12207306 tcgaaaaaaattcagataagttttttttttaattatgtaatttatttattgaatgttagaa 12207246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 30162140 - 30162180
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  30162140 ttttttaaattctgtaattcatttattgaatgttagaattt 30162180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 12206839 - 12206796
Alignment:
Q  153 ccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  12206839 ccaactttctcatggtgggaaaggattaacctttcccatgtgaa 12206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 17918217 - 17918268
Alignment:
Q  13 tcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| | ||||||||| ||||||||||||| |||||||||||||||    
T  17918217 tcagataattttcttttaaattctgtaattcatttactgaatgttagaattt 17918268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 20243732 - 20243791
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||| ||||||| |  ||||||||||||||||||||||||||    
T  20243732 aaaaaaattcagataattttttgttaaattcttcaattcatttattgaatgttagaattt 20243791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 30162491 - 30162432
Alignment:
Q  6 aaaatattcagataattatttttt-aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| |||||| ||||| | |||||||||||||||||||||||||||    
T  30162491 aaaaaattcagataattttttttttaaattctataattcatttattgaatgttagaattt 30162432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 7717194 - 7717136
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||| |||||| |||||| |||| ||||||||||||||||||||||| |||||    
T  7717194 aaaaaattcatataattttttttttaattctgtaattcatttattgaatgttataattt 7717136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 11256320 - 11256354
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||||||||||||||||||||||||||    
T  11256320 aaattatgtaattcatttattgaatgttagaattt 11256354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 4386496 - 4386549
Alignment:
Q  11 attcagataattatttt-ttaaattatgtaattcatttattgaatgttagaatt 63  Q
    |||||||||||| |||| |||||||  |||||||||||||||||||||||||||    
T  4386496 attcagataattttttttttaaattcagtaattcatttattgaatgttagaatt 4386549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 7716849 - 7716911
Alignment:
Q  6 aaaatattcagataattatttttt----aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| ||||||    ||||| |||||||||||||||||||||||||||||    
T  7716849 aaaaaattcagataatttttttttttaaaaattctgtaattcatttattgaatgttagaattt 7716911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 9224441 - 9224489
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattg 51  Q
    |||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  9224441 tcgaaaaaaattcagataatt-ttttttaaattctgtaattcatttattg 9224489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 16571305 - 16571345
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  16571305 ttttttgaattctgtaattcatttattgaatgttagaattt 16571345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 40166032 - 40166092
Alignment:
Q  2 tcgaaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| ||||| |||||| |||| ||||||| ||||||||| ||||||||||||||||    
T  40166032 tcgaaaaaaattcaaataattttttttttaaattttgtaattcaattattgaatgttagaa 40166092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 33848496 - 33848539
Alignment:
Q  153 ccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||    
T  33848496 ccaactttcccatgatgggaaaagattgacctttcccatgtgaa 33848539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 4386858 - 4386797
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| | ||||  ||||| |||| ||||||||||||||||||||||||    
T  4386858 aaaaaaattcagataattttctttttaaaattctgtatttcatttattgaatgttagaattt 4386797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 43743842 - 43743880
Alignment:
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  43743842 tttcccatggtgggaaaggattcacctttcccatgtgaa 43743880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 16903008 - 16902957
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgtta 58  Q
    ||||| |||||||||||| ||||||||||  |||||||||||||||||||||||    
T  16903008 aaaaaaattcagataatt-ttttttaaatg-tgtaattcatttattgaatgtta 16902957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 18949957 - 18949917
Alignment:
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||| |||| ||||||| |||||||||||||    
T  18949957 actttcccatggtgagaaaagattaacttttcccatgtgaa 18949917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 3e-46; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 6032295 - 6032157
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6032295 aaattgttggaagatagtgtgaagaaaaatctagtcttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccata 6032196  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  6032195 gtgggaaaggattaacctttcccatgtgaacacacacct 6032157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 5523346 - 5523201
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  5523346 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 5523247  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacac 203  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  5523246 tttcctatggtggaaaaggattaacctttcccatgtgaacacacac 5523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 30610857 - 30610710
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||||         ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  30610857 agaatttttaaattgttggaagatagtgtcaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaat 30610758  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  30610757 tttcccatggtggaaaatgattaacctttcccatgcgaacacacacct 30610710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 33668358 - 33668229
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33668358 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatttaatcattgaatccaactttcccatg 33668259  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||||||||||||||    
T  33668258 gtgggaaatgattaacctttcccatgtgaa 33668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 12809206 - 12809068
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  | |||||||||||||||||||||||||||||||||||| |||||||||||| ||     
T  12809206 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacttgttaagaatatgttcttcacttaatctaatcattgcatccaactttcctata 12809107  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  12809106 gtgggaaaggattaacctttcccatgtgaacacacacct 12809068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 200
Target Start/End: Complemental strand, 13944436 - 13944294
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  13944436 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaac 13944337  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacaca 200  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||    
T  13944336 tttcccatgatgggaaatgattaatctttcccatatgaacaca 13944294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 5523786 - 5523924
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  5523786 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtcttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaac 5523885  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  5523886 tttccaatggtgggaaaagattaacctttcccatgtgaa 5523924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 30611285 - 30611423
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||    
T  30611285 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcagttaatctaatcattgaatccaac 30611384  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| ||||||| |||| ||||||||    
T  30611385 tttcccatggtgggaaaggattaacatttctcatgtgaa 30611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 13936580 - 13936718
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||||||  |||||||||||||||||||| |||||||||||||||||| || |||    
T  13936580 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgactctaac 13936679  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  13936680 tttcccatggtgggaaaggattaacctttcccatgtgaa 13936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 196
Target Start/End: Original strand, 12809651 - 12809780
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  12809651 aaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccacc 12809750  T
Q  167 gtgggaaatgattaacctttcccatgtgaa 196  Q
     ||||||| |||||||||||||||||||||    
T  12809751 atgggaaaggattaacctttcccatgtgaa 12809780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 33668780 - 33668916
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||||||||||||   |||||||| ||||| |||||||||||||||||||||||||||||||||| | |||    
T  33668780 aaattgttggaagatagtgtgaagaaaaatctagtgttgagaaa-catgttaaaaatatattcttcacttaatctaatcattgaatccaacttttctatg 33668878  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  33668879 gtgggaaatgattaacatttccaatgtgaacacacacc 33668916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 31723970 - 31723846
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  31723970 aaattgttggaagatagtgtgaagaaaattctagtgctgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaaatttcccatg 31723871  T
Q  167 gtgggaaatgattaacctttcccat 191  Q
    || ||||| ||||||||||||||||    
T  31723870 gtaggaaaggattaacctttcccat 31723846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 6032693 - 6032831
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  6032693 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaac 6032792  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| ||||||| ||||  |||||||||| |||| ||||    
T  6032793 tttctcatggtgagaaaaaattaaccttttccatatgaa 6032831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 33648111 - 33648241
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        ||||||||||| ||  || ||||||||||| |||||||||||||  ||||||||||||||| ||||| ||    
T  33648111 aaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagaacacgttaagaatatattcttcacttaattcaatcattgaatccaattttcctat 33648210  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| ||||  ||| ||||||||||||||||    
T  33648211 ggtgtgaaagaattgacctttcccatgtgaa 33648241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 6032664 - 6032601
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattta 65  Q
    ||||||||  ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  6032664 tcgaaaaaatttcagataattttttttaaaattctgtaattcatttattgaatgttagaattta 6032601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 33668396 - 33668460
Alignment:
Q  2 tcgaaaaatattcagataattatttt--ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||    
T  33668396 tcgaaaaaaattcagataatttttttttttaaattctgtaattcatttattgaatgttagaattt 33668460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 31724388 - 31724494
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatc-taatcattgaatccaa 156  Q
    |||||||  ||||| |||||||||||||||        ||| ||||||| ||  |||||||||||||| ||||||||||||||  |||||||||||||||    
T  31724388 agaatttttaaattattggaagatagtgtgaagaaaaatcttgtgttgaaagagcatgttaagaatatattcttcacttaatcaaaatcattgaatccaa 31724487  T
Q  157 ctttccc 163  Q
    |||||||    
T  31724488 ctttccc 31724494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 13944459 - 13944519
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||| ||||||| |||||||||||||||||||||||| ||||    
T  13944459 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttaggattt 13944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 33668730 - 33668674
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  33668730 aaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttaga 33668674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 6032345 - 6032383
Alignment:
Q  26 ttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6032345 ttttaaattctgtaattcatttattgaatgttagaattt 6032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 30610897 - 30610958
Alignment:
Q  4 gaaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaatt 63  Q
    |||||| |||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||||    
T  30610897 gaaaaaaattcagataattttttttttaaaattctgtaatttatttattgaatgttagaatt 30610958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 33648073 - 33648013
Alignment:
Q  4 gaaaaatattcagataattatttttt---aaattatgtaattcatttattgaatgttagaa 61  Q
    |||||| |||||||||||| ||||||   ||||| ||||||||||||||||||||||||||    
T  33648073 gaaaaaaattcagataattttttttttttaaattctgtaattcatttattgaatgttagaa 33648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 2038645 - 2038596
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||||||||||||||||||| ||||| ||| ||||| |||||    
T  2038645 aactttcccatggtgggaaatgattaacttttccgatgcgaacaaacacc 2038596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 12809592 - 12809556
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12809592 ttttttaaattctgtaattcatttattgaatgttaga 12809556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 30611237 - 30611197
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  30611237 tttttttaattctgtaattcatttattgaatgttagaattt 30611197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 5523415 - 5523449
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  5523415 aaattctgtaattcatttattgaatgttagaattt 5523449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 31724011 - 31724068
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttaga 60  Q
    ||||| |||||||||||| ||||||  ||||| ||||| |||||||||||||||||||    
T  31724011 aaaaaaattcagataattttttttttaaaattctgtaagtcatttattgaatgttaga 31724068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12809238 - 12809295
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaa 61  Q
    ||||| ||||| |||||| ||||||||| || | ||||||||||||||||||||||||    
T  12809238 aaaaaaattcaaataatttttttttaaaattctttaattcatttattgaatgttagaa 12809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 27797263 - 27797117
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  27797263 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaac 27797164  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
     |||||||||||||||| ||||||||||| |||||||||||||||||    
T  27797163 cttcccatggtgggaaaggattaaccttttccatgtgaacacacacc 27797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 43368775 - 43368921
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43368775 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatacaac 43368874  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  43368875 tttcccatggtgggaaagaattaacctttcccatgtgaacacacacc 43368921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 58 - 205
Target Start/End: Original strand, 7219588 - 7219734
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  7219588 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa- 7219686  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7219687 tttcccatgatgggaaaggattaacctttcccatgtgaacacacacct 7219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 42839497 - 42839620
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42839497 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatg 42839596  T
Q  167 gtgggaaatgattaacctttccca 190  Q
    |||||||| |||||||||||||||    
T  42839597 gtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 42840253 - 42840399
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||    
T  42840253 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagattatgttaaaaatatgttcttcacttaatctaatcattgaattcaac 42840352  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||    
T  42840353 tttcccatagtggaaaatgattaacctttcccatgtaaacacacacc 42840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 1403666 - 1403774
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  1403666 tctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaaggattaacctttcctatgtga 1403764  T
Q  196 acacacacct 205  Q
    ||||||||||    
T  1403765 acacacacct 1403774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 1403188 - 1403048
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||||||        |||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  1403188 ttagaattttaaaattgttgaaagatagtgtgaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 1403089  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  1403088 actttcccatggtgggaaaggattaaccttttccatgtgaa 1403048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 52859770 - 52859874
Alignment:
Q  100 gtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacac 199  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  52859770 gtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaacac 52859869  T
Q  200 acacc 204  Q
    |||||    
T  52859870 acacc 52859874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 42839807 - 42839696
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaac 197  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||    
T  42839807 tagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaac 42839708  T
Q  198 acacaccttcac 209  Q
    ||||||| ||||    
T  42839707 acacaccatcac 42839696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 49533880 - 49533741
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    ||||| |||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49533880 aaattattggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccgtg 49533781  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    |||||||| |||||||||| || ||||||||||| |||||    
T  49533780 gtgggaaaggattaaccttccctatgtgaacacatacctt 49533741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 27816944 - 27817082
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27816944 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaggaatatgttcttcacttaatctaatcattgaatccaac 27817043  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||||||| |||||||||| ||||||||||    
T  27817044 ttttccatggtgggaaaggattaaccttacccatgtgaa 27817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 8560692 - 8560828
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||| ||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  8560692 aaattgttagaagatagtgtgaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caacttttccatg 8560790  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||||||| |||||||||||||||||||||||||||||    
T  8560791 gtgggaaaggattaacctttcccatgtgaacacacacc 8560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 42839083 - 42838945
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||    
T  42839083 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaac 42838984  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  42838983 tttcccatggtgggaaaggattaacctttaccatgtgaa 42838945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 48843688 - 48843582
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  48843688 tctagtgttgagagaacatgttaagaatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgtga 48843589  T
Q  196 acacaca 202  Q
    |||||||    
T  48843588 acacaca 48843582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 8560304 - 8560164
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||| ||        ||||||||||| ||  |||||||||||||||||||||||||||||||||| |||||||||    
T  8560304 ttagaattttaaaattgttgaaagatagtatgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatctttgaatcca 8560205  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    || |||||||||||| ||| |||||||||||||||||||||    
T  8560204 acattcccatggtggaaaaggattaacctttcccatgtgaa 8560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 27797676 - 27797814
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| || |||    
T  27797676 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaac 27797775  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| |||| ||| |||||||||||||||||||||    
T  27797776 tttcccatagtggaaaaggattaacctttcccatgtgaa 27797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 49534336 - 49534474
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||         |||||||||||||  |||| |||||||||||| || |||||||||||||||||||||||||    
T  49534336 agaatttttaaattgttggaagatagtgtgaagaaaaacctagtgttgagagagcatgataagaatatgtttttaacttaatctaatcattgaatccaac 49534435  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  49534436 ttttccatggtgggaaaggattaacctttcccatgtgaa 49534474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 51248432 - 51248574
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  51248432 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaattattgaatcaaacttttccatg 51248531  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacaccttcac 209  Q
    ||||||||  |||||||||||||||  ||||||||||| ||||    
T  51248532 gtgggaaaaaattaacctttcccattggaacacacaccctcac 51248574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 43368327 - 43368203
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  43368327 aaattgttggaagatagtgtgaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatttaatcattgaatctaacattcccatg 43368228  T
Q  167 gtgggaaatgattaacctttcccat 191  Q
    |||||||| ||||||||||||||||    
T  43368227 gtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 6288184 - 6288282
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||    
T  6288184 tagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaa 6288282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 41563287 - 41563175
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| | |||  |||||| |||||||| |||    
T  41563287 tctagtgttgagagagcatgttaagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcccatatga 41563188  T
Q  196 acacacaccttca 208  Q
    |||||||||||||    
T  41563187 acacacaccttca 41563175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 48843911 - 48844010
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48843911 aaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 48369620 - 48369490
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        ||||||||||| ||  ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  48369620 aaaattgttggaagatagtgtgaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactttcctat 48369521  T
Q  166 ggtgggaaatgattaacctttcccatgtgaa 196  Q
     |||| ||||||||    |||||||||||||    
T  48369520 agtggaaaatgattggtttttcccatgtgaa 48369490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 7782685 - 7782769
Alignment:
Q  112 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  7782685 catgataagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtgaa 7782769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 41563741 - 41563833
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactt 159  Q
    |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41563741 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 51247974 - 51247866
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||     
T  51247974 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaat 51247875  T
Q  158 tttcccatg 166  Q
    ||| |||||    
T  51247874 ttttccatg 51247866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 195
Target Start/End: Original strand, 27934233 - 27934371
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  ||||||||||||||||||| |        ||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||    
T  27934233 ttagaatttttaaattgttggaagatagtgcgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttctcttaatctaatcattg-atcca 27934331  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||| ||| |||  |||||| |||  |||||||    
T  27934332 actttcccatgttggaaaagaattaacatttttcatgtga 27934371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 6287766 - 6287672
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaat 152  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  6287766 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat 6287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 160
Target Start/End: Complemental strand, 37725521 - 37725423
Alignment:
Q  62 tttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt 160  Q
    |||||||||| |||||| ||||||||        ||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||    
T  37725521 tttaaaaattattggaaaatagtgtgaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 7219145 - 7219048
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttccca 164  Q
    ||||| |||||||||||||||        |||||||||||||   |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7219145 aaattattggaagatagtgtgaagaaaaatctagtgttgagaaagcatgttaagaatatattcttcatttaatctaatcattgaatccaactttccca 7219048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 52859694 - 52859635
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  52859694 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 52859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 51248007 - 51248067
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  51248007 aaaaaaattcagataattttttttttaaattatgtaattcatttattgaatgttagaattt 51248067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 27797295 - 27797354
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  27797295 aaaaaaattcagataatttttttttaaattttataattcatttattgaatgttagaattt 27797354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 51248394 - 51248331
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  51248394 tcgaaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttagaattt 51248331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 52859295 - 52859189
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||||||||||||||||||         |||| || ||||||  ||||||||||||||||| |||| ||||||||||||||||||| |||    
T  52859295 agaatttttaaattgttggaagatagtgtaaagaaaaatctaatgatgagagagcatgttaagaatatgttattcatttaatctaatcattgaatctaac 52859196  T
Q  158 tttccca 164  Q
    |||||||    
T  52859195 tttccca 52859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 6287798 - 6287857
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||| ||||||| | |||||||||||||||||||||||||||    
T  6287798 aaaaaaattcagataattttttgttaaattctttaattcatttattgaatgttagaattt 6287857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 8560334 - 8560393
Alignment:
Q  6 aaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  8560334 aaaaaattcagataattttttttttaaattctgtaattcatttattgaatgttagaattt 8560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 27934206 - 27934147
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| |||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  27934206 tcgaaaaaaattcagataattttttttgaaattctataattcatttattgaatgttagaa 27934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 42839467 - 42839408
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  42839467 aaaaaaattcagataattttttttaaaattctataattcatttattgaatgttagaattt 42839408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 43368365 - 43368428
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||| |||||||||||| ||||||||| || |||||||||||||||||||||||||||||    
T  43368365 tcgataaaaattcagataatttttttttaaaattctgtaattcatttattgaatgttagaattt 43368428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 49533930 - 49533989
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| || |||||||||||  ||||||||||||||||||||||||||||    
T  49533930 aaaaaaattcagatattttttttttaaattccgtaattcatttattgaatgttagaattt 49533989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 11032163 - 11032256
Alignment:
Q  100 gtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgt 193  Q
    ||||||||||| |||| ||||||| ||||| | ||||||||||||  |  ||| |||||||||||||||||||||  |||  ||||||||||||    
T  11032163 gtgttgagagtccatgataagaatgtgttcattacttaatctaatggtcaaattcaactttcccatggtgggaaactattcccctttcccatgt 11032256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 42840221 - 42840164
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaat 62  Q
    ||||| |||||||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  42840221 aaaaaaattcagataattttttttaaaattctgtaattcatttattgagtgttagaat 42840164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 43368743 - 43368683
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||| |||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||    
T  43368743 aaaaaaattcagataatttttttttttaaattctgtaattcatttattgaatgttagaatt 43368683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 1403218 - 1403278
Alignment:
Q  5 aaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||||| || ||||||||||||||||||| |||||||||    
T  1403218 aaaaaaattcagataatttttttttaaaattctgtaattcatttattgaatattagaattt 1403278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 37725559 - 37725619
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| |||| ||||||| | |||||||||||||||||||||||||||    
T  37725559 aaaaaaattcagataattttttttttaaattctataattcatttattgaatgttagaattt 37725619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 41563678 - 41563638
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  41563678 ttttttaaattctgtaattcatttattgaatgttagaattt 41563638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 48369658 - 48369718
Alignment:
Q  2 tcgaaaaatattcagataattatttt-ttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| |||||||||||| |||| ||||||| |||||||||||| |||||||||||||    
T  48369658 tcgaaaaaaattcagataattttttttttaaattctgtaattcattttttgaatgttagaa 48369718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 7219555 - 7219500
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||| ||||| |||  ||||||||||||| |||||||||||||||||||||||||    
T  7219555 aaaaaaattcaaatatatattttttaaattctgtaattcatttattgaatgttaga 7219500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 7782610 - 7782552
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    |||||||| ||||||||| || ||||||||||| ||||||| ||||||||||||||||||    
T  7782610 tcgaaaaaaattcagatattt-ttttttaaattctgtaatttatttattgaatgttagaa 7782552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 48843863 - 48843824
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaatt 63  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  48843863 ttttttaaattctgtaattcatttattgaatgttagaatt 48843824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 52859337 - 52859395
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| || |||||||| || |||||||||||||||||||||||||||||    
T  52859337 aaaaaaattcagatattttttttttaa-ttctgtaattcatttattgaatgttagaattt 52859395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 7219213 - 7219247
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||||||||||||||||||||||||||||    
T  7219213 aaattatgtaattcatttattgaatgttagaattt 7219247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 37725672 - 37725713
Alignment:
Q  120 gaatatgttcttcacttaatctaatcattgaatccaactttc 161  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  37725672 gaatatattcttcacttaatctaatcattgaatccaattttc 37725713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 48620369 - 48620410
Alignment:
Q  164 atggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  48620369 atggtgggaaaggattcacctttcccatgtgaacacacacct 48620410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 27797620 - 27797580
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  27797620 tttttttaattctgtaattcatttattgaatgttagaattt 27797580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 42839140 - 42839180
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  42839140 tttttttaattctgtaattcatttattgaatgttagaattt 42839180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 48843769 - 48843809
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  48843769 ttttttaatttctgtaattcatttattgaatgttagaattt 48843809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 49534277 - 49534242
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattta 65  Q
    ||||| ||||||||||||||||||||||||||||||    
T  49534277 aaattctgtaattcatttattgaatgttagaattta 49534242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 29148989 - 29148955
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttccc 189  Q
    |||||||||||||||||||| ||||||||||||||    
T  29148989 aactttcccatggtgggaaaggattaacctttccc 29148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 42839903 - 42839941
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaat 62  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  42839903 tttttttaattctgtaattcatttattgaatgttagaat 42839941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 6288115 - 6288045
Alignment:
Q  2 tcgaaaaatattcagataattatttt---ttaaattatgtaattcatttattgaatgttagaatttaaaaa 69  Q
    |||||||| |||||||||||| ||||     ||||| |||||||||||||||||||||||| |||| ||||    
T  6288115 tcgaaaaaaattcagataatttttttaaaaaaaattctgtaattcatttattgaatgttagtatttcaaaa 6288045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 56 - 196
Target Start/End: Complemental strand, 3957648 - 3957508
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    |||||||||  |||||||||||||||||||||        ||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  3957648 ttagaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatattaagaatatgttcttcacttaatctaatcattgaatcca 3957549  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  3957548 actttcccatggtgggaaaggattaacctttcccatgtgaa 3957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 26687646 - 26687493
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  26687646 agaatttttaaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaac 26687547  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacaccttcacat 211  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||| ||||||    
T  26687546 tttcccatggtagaaaaggattaacctttcccatgtgaacacacaccctcacat 26687493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 26957377 - 26957224
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        |||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  26957377 agaatttttaaattgttggaagatagtgtgaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaac 26957278  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacaccttcacat 211  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||| ||||||    
T  26957277 tttcccatggtagaaaaggattaacctttcccatgtgaacacacaccctcacat 26957224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 4929008 - 4928868
Alignment:
Q  67 aaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 166  Q
    |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  4929008 aaattgttggaagatagtgtgaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattaaatccaacttttctatg 4928909  T
Q  167 gtgggaaatgattaacctttcccatgtgaacacacaccttc 207  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  4928908 gtgggaaaggattaacttttcccatgtgaacacacaccttc 4928868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 28075909 - 28076047
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  |||||||||||||| || ||||||||||||||||||||||||||||    
T  28075909 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatatttttcacttaatctaatcattgaatccaac 28076008  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  28076009 tttcccatggtggaaaatgattaaccttttccatgtgaa 28076047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 4929484 - 4929584
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4929484 tctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtga 4929583  T
Q  196 a 196  Q
    |    
T  4929584 a 4929584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 3739603 - 3739749
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3739603 agaatttttaaattgttggaaaatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 3739702  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    |||| ||| || ||||| ||||||  ||||| |||||||||||||||    
T  3739703 tttctcatagtaggaaaggattaagttttcctatgtgaacacacacc 3739749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 33430150 - 33430051
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||    
T  33430150 tctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttt-ccatggtaggaaaggattaaccttttccatgtga 33430052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 21770101 - 21769993
Alignment:
Q  101 tgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatc----caactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||| ||| |||||||||||||||| ||||    
T  21770101 tgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaaaggattaacctttcccatatgaa 21770002  T
Q  197 cacacacct 205  Q
    |||||||||    
T  21770001 cacacacct 21769993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 5324383 - 5324481
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  ||||||||||||||||||||    
T  5324383 tagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaa 5324481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 196
Target Start/End: Original strand, 8813623 - 8813761
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  ||||| |||||||||||||||        |||||||| |||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  8813623 agaatttttaaattattggaagatagtgtgaagacaaatctagtgtagagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaac 8813722  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||| ||| |||||||||||||||| ||||    
T  8813723 tttcccatgatggaaaaggattaacctttcccatatgaa 8813761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 3958074 - 3958216
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        | ||||||||||||   ||||||| |||||||||||||||||||||||| |||||||| |||    
T  3958074 agaatttttaaattgttggaagatagtgtgaagaaaaatttagtgttgagagagtatgttaaaaatatgttcttcacttaatctaattattgaatcaaac 3958173  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacaca 200  Q
    |||||  || ||||||| |||||||||||||||||||||||||    
T  3958174 tttccattgatgggaaaggattaacctttcccatgtgaacaca 3958216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 42408505 - 42408613
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42408505 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 42408604  T
Q  158 tttcccatg 166  Q
    ||| |||||    
T  42408605 ttttccatg 42408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 103 - 185
Target Start/End: Complemental strand, 42408093 - 42408011
Alignment:
Q  103 ttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctt 185  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  42408093 ttgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaaagattaacctt 42408011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 3739146 - 3739038
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||| ||||        ||||||||||||||   ||||||||||||| || ||||||||||||||||||||||||||||    
T  3739146 agaatttttaaattgttggaagatattgtgaagaaaaatctagtgttgagagagtatgttaagaatatatttttcacttaatctaatcattgaatccaac 3739047  T
Q  158 tttcccatg 166  Q
    |||||||||    
T  3739046 tttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 13738197 - 13738086
Alignment:
Q  66 aaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccat 165  Q
    ||||||||||||||||||||||        ||||||||||| ||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13738197 aaaattgttggaagatagtgtgaagaaaaatctagtgttgaaaga-catgtaaagaatatgttcttcacttaatccaatcattgaatccaactttcccat 13738099  T
Q  166 ggtgggaaatgat 178  Q
     || | |||||||    
T  13738098 agtagaaaatgat 13738086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 5324368 - 5324302
Alignment:
Q  140 ctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacctt 206  Q
    ||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||    
T  5324368 ctaatcattgaatccaactttcccatgataggaaaggattaagctttcccatgtgaacacacacctt 5324302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 3957687 - 3957746
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattta 65  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  3957687 aaaaaattcagataattttttttttaattatgtaattcatttattgaatgttagaattta 3957746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 26688035 - 26688127
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |         |||||||||| ||||||||||||||||||||    
T  26688035 tctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatcta--------gtggtgggaaaggattaacctttcccatgtga 26688126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 26957766 - 26957858
Alignment:
Q  96 tctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |         |||||||||| ||||||||||||||||||||    
T  26957766 tctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatcta--------gtggtgggaaaggattaacctttcccatgtga 26957857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 8813135 - 8813078
Alignment:
Q  146 attgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacac 203  Q
    ||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||    
T  8813135 attgaatccaactttcccatggtgggagaggattaacctttcccatatgaacacacac 8813078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 4929058 - 4929114
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  4929058 aaaaaaattcagataatttttttttaaattctgtaattcatttattgaatgttagaa 4929114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 8813241 - 8813292
Alignment:
Q  13 tcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8813241 tcagataatttttttttaaattctgtaattcatttattgaatgttagaattt 8813292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 3739571 - 3739512
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||||||    
T  3739571 aaaaaaattcagatatttttttttaaaattctgtaattcatttattgaatgttagaattt 3739512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 4929417 - 4929359
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaattatgtaattcatttattgaatgttaga 60  Q
    |||||||| |||||||| ||| ||||| ||||| |||||||||||||||||||||||||    
T  4929417 tcgaaaaaaattcagatgattttttttaaaattctgtaattcatttattgaatgttaga 4929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 8813590 - 8813529
Alignment:
Q  5 aaaaatattcagataattatttttt--aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||  ||||| |||||||||||||||||||||||||||||    
T  8813590 aaaaaaattcagataatttttttttcaaaattctgtaattcatttattgaatgttagaattt 8813529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 3739177 - 3739239
Alignment:
Q  5 aaaaatattcagataattatttttt---aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||| ||||||   ||||| |||||||||||||||||||||||||||||    
T  3739177 aaaaaaattcagataatttttttttttaaaattctgtaattcatttattgaatgttagaattt 3739239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3958033 - 3957977
Alignment:
Q  5 aaaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaa 61  Q
    ||||| ||||| |||||| ||||||||||| | ||||||||||||||||||||||||    
T  3958033 aaaaaaattcatataatttttttttaaattctttaattcatttattgaatgttagaa 3957977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 25075034 - 25075074
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  25075034 aactttcccatggtgggaaaggattaacctttcccatgtga 25075074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 25133003 - 25133043
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtga 195  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  25133003 aactttcccatggtgggaaaggattaacctttcccatgtga 25133043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 26687684 - 26687735
Alignment:
Q  13 tcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| | |||||||||  ||||||||||||||||||||||||||||    
T  26687684 tcagataattttcttttaaattcagtaattcatttattgaatgttagaattt 26687735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 26957415 - 26957466
Alignment:
Q  13 tcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||||||||| | |||||||||  ||||||||||||||||||||||||||||    
T  26957415 tcagataattttcttttaaattcagtaattcatttattgaatgttagaattt 26957466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 42408476 - 42408413
Alignment:
Q  2 tcgaaaaatattcagataattattttttaaa-ttatgtaattcatttattgaatgttagaattt 64  Q
    |||||||| ||| |||||||| ||||| ||| || |||||||||||||||||||||||||||||    
T  42408476 tcgaaaaaaatttagataattttttttaaaaattttgtaattcatttattgaatgttagaattt 42408413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 39149468 - 39149509
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  39149468 aactttcccatggtgggaaaggattcacctttcccatgtgaa 39149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 28075846 - 28075810
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttaga 60  Q
    ||||||||||| |||||||||||||||||||||||||    
T  28075846 ttttttaaattctgtaattcatttattgaatgttaga 28075810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 25074362 - 25074291
Alignment:
Q  125 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||||||||||  || |||  |||||||||||||||| ||| |||||||| || |||||||||    
T  25074362 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25074291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 25132331 - 25132260
Alignment:
Q  125 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||| ||||||||||  || |||  |||||||||||||||| ||| |||||||| || |||||||||    
T  25132331 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25132260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 21770175 - 21770233
Alignment:
Q  6 aaaatattcagataattattttttaaattatgtaattcatttattgaatgttagaattt 64  Q
    |||| ||||||| | || ||| ||||||| | |||||||||||||||||||||||||||    
T  21770175 aaaaaattcagaaatttttttgttaaattctttaattcatttattgaatgttagaattt 21770233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 39148817 - 39148767
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaacacacacct 205  Q
    |||||||||||||||| |||  ||| ||||||||||| |||||||||||||    
T  39148817 aactttcccatggtggaaaagaattcacctttcccatatgaacacacacct 39148767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 42408170 - 42408219
Alignment:
Q  5 aaaaatattcagataattatttt-ttaaattatgtaattcatttattgaa 53  Q
    ||||| |||||||||||| |||| ||||||| ||||||||||||||||||    
T  42408170 aaaaaaattcagataattttttttttaaattctgtaattcatttattgaa 42408219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 38064926 - 38064958
Alignment:
Q  181 acctttcccatgtgaacacacaccttcacattt 213  Q
    |||||||||||||||||||||||||||| ||||    
T  38064926 acctttcccatgtgaacacacaccttcatattt 38064958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 58 - 196
Target Start/End: Complemental strand, 11411 - 11274
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||||||||||||        ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  11411 agaatttttaaattgttggaagatagtgtgaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 11312  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  11311 tttcccatggt-ggaaaagattaacctttcccatgtgaa 11274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 196
Target Start/End: Original strand, 15171 - 15311
Alignment:
Q  56 ttagaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatcca 155  Q
    ||||||||| |||||||||| |||||||||||        |||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15171 ttagaattttaaaattgttgaaagatagtgtgaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatcca 15270  T
Q  156 actttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  15271 actttcccatggtgggaaaggattaaccttttccatgtgaa 15311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 1631 - 1485
Alignment:
Q  58 agaatttaaaaattgttggaagatagtgtgnnnnnnnntctagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 157  Q
    |||||||  |||||||||||| ||||||||        ||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||    
T  1631 agaatttttaaattgttggaaaatagtgtgaagaaaaatctagtgttgagagagcatgctaagaatatgttattcacttaatctaatcattgaatccaac 1532  T
Q  158 tttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 204  Q
    ||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  1531 ttttccatggtgcgaaatgattaagctttcccatgtgaacacacacc 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 1677 - 1711
Alignment:
Q  30 aaattatgtaattcatttattgaatgttagaattt 64  Q
    ||||| |||||||||||||||||||||||||||||    
T  1677 aaattctgtaattcatttattgaatgttagaattt 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 11764 - 11862
Alignment:
Q  98 tagtgttgagagttcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||| |||||||||    
T  11764 tagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaa 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 11668 - 11630
Alignment:
Q  24 ttttttaaattatgtaattcatttattgaatgttagaat 62  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  11668 tttttttaattctgtaattcatttattgaatgttagaat 11630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 90664 - 90623
Alignment:
Q  155 aactttcccatggtgggaaatgattaacctttcccatgtgaa 196  Q
    |||||||| ||||||| |||||||| ||||||||||||||||    
T  90664 aactttcctatggtggaaaatgattcacctttcccatgtgaa 90623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University