View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15346_low_15 (Length: 237)
Name: NF15346_low_15
Description: NF15346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15346_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 48482395 - 48482174
Alignment:
| Q |
1 |
tttagaggatcaaagcttatttcatcaaataacttagaactccttgaaccttcaacctctgaacattatgaggttgagccaatatctgccgccaagtgtc |
100 |
Q |
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| T |
48482395 |
tttagaggatcaaagcttatttcatcaaataacttagaactccttgaaccttcaacctctgaacattatgaggttgagccaatatctgccgccaagtgtc |
48482296 |
T |
|
| Q |
101 |
gtgtttacaaaaggcctccaaataaggtacttattttcattgcnnnnnnngaacaagtttagatcaagttatcaacttctctaggcttctgctttgaatt |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48482295 |
gtgtttacaaaaggcctcccaataaggtacttattttcatcgcaaaaaaagaacaagtttagatcaagttatcaacttctctaggcttctgctttgaatt |
48482196 |
T |
|
| Q |
201 |
catacatagtcacttgcggttt |
222 |
Q |
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||||||||||||||||| |||| |
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| T |
48482195 |
catacatagtcacttgcagttt |
48482174 |
T |
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