View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15347_low_15 (Length: 255)

Name: NF15347_low_15
Description: NF15347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15347_low_15
NF15347_low_15
[»] chr3 (20 HSPs)
chr3 (1-248)||(12033389-12033636)
chr3 (1-248)||(17131595-17131843)
chr3 (1-246)||(14865711-14865957)
chr3 (1-234)||(19235014-19235245)
chr3 (1-111)||(23370449-23370560)
chr3 (41-128)||(51301572-51301659)
chr3 (5-146)||(13302190-13302331)
chr3 (5-146)||(13312846-13312987)
chr3 (5-117)||(13323737-13323848)
chr3 (41-115)||(10389428-10389502)
chr3 (41-115)||(10414517-10414591)
chr3 (41-115)||(10421187-10421261)
chr3 (1-69)||(10555353-10555421)
chr3 (51-108)||(24933823-24933880)
chr3 (57-111)||(9534328-9534382)
chr3 (57-130)||(17240513-17240587)
chr3 (57-111)||(18929246-18929300)
chr3 (59-111)||(20247791-20247843)
chr3 (59-111)||(24192957-24193009)
chr3 (56-108)||(41455097-41455149)
[»] chr1 (9 HSPs)
chr1 (1-247)||(20851076-20851323)
chr1 (1-247)||(20857703-20857950)
chr1 (1-247)||(21706140-21706387)
chr1 (1-169)||(21710760-21710929)
chr1 (51-109)||(20044946-20045004)
chr1 (57-130)||(18712780-18712854)
chr1 (57-111)||(20437024-20437078)
chr1 (57-111)||(32651573-32651627)
chr1 (56-108)||(41112038-41112090)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-246)||(79433-79680)
[»] chr8 (7 HSPs)
chr8 (1-247)||(24320614-24320861)
chr8 (57-167)||(29643386-29643497)
chr8 (41-111)||(44477623-44477693)
chr8 (41-111)||(44492781-44492851)
chr8 (57-142)||(18614240-18614327)
chr8 (57-130)||(23482053-23482127)
chr8 (59-111)||(8727735-8727787)
[»] chr7 (19 HSPs)
chr7 (1-248)||(20906405-20906652)
chr7 (1-246)||(16090940-16091187)
chr7 (1-246)||(29181052-29181299)
chr7 (1-156)||(2971209-2971365)
chr7 (1-160)||(2465312-2465470)
chr7 (1-115)||(14319573-14319688)
chr7 (1-115)||(14230777-14230892)
chr7 (179-248)||(2966828-2966898)
chr7 (41-109)||(31155396-31155464)
chr7 (48-139)||(3857357-3857447)
chr7 (1-69)||(14567246-14567315)
chr7 (57-111)||(11382871-11382925)
chr7 (57-111)||(11389348-11389402)
chr7 (49-111)||(21230952-21231014)
chr7 (56-111)||(14422985-14423040)
chr7 (57-111)||(16009577-16009631)
chr7 (56-108)||(12590643-12590695)
chr7 (56-108)||(13007435-13007487)
chr7 (55-111)||(20311050-20311106)
[»] chr5 (21 HSPs)
chr5 (1-169)||(19236842-19237011)
chr5 (1-247)||(22461020-22461267)
chr5 (1-247)||(22467644-22467891)
chr5 (1-228)||(20772854-20773078)
chr5 (1-169)||(20781686-20781853)
chr5 (1-169)||(28909234-28909403)
chr5 (1-169)||(28945629-28945798)
chr5 (1-169)||(28895986-28896155)
chr5 (1-169)||(28924812-28924981)
chr5 (1-169)||(28889282-28889451)
chr5 (1-234)||(24929874-24930105)
chr5 (48-169)||(20820159-20820279)
chr5 (48-169)||(20827259-20827379)
chr5 (57-130)||(18407944-18408018)
chr5 (49-115)||(34830081-34830146)
chr5 (57-130)||(23111200-23111274)
chr5 (55-111)||(22438746-22438802)
chr5 (56-111)||(38144536-38144591)
chr5 (57-111)||(19512387-19512441)
chr5 (57-111)||(28370055-28370109)
chr5 (56-108)||(23528634-23528686)
[»] chr2 (14 HSPs)
chr2 (8-248)||(25180880-25181121)
chr2 (10-247)||(10441-10679)
chr2 (1-115)||(27207663-27207778)
chr2 (3-115)||(26885179-26885291)
chr2 (1-109)||(23168243-23168351)
chr2 (1-109)||(23579500-23579608)
chr2 (57-130)||(23265123-23265197)
chr2 (57-130)||(23280191-23280265)
chr2 (41-108)||(5706008-5706075)
chr2 (57-111)||(6483718-6483772)
chr2 (57-111)||(6487185-6487239)
chr2 (57-111)||(21908360-21908414)
chr2 (41-74)||(27366533-27366566)
chr2 (56-108)||(26583830-26583882)
[»] chr6 (21 HSPs)
chr6 (1-247)||(20007891-20008138)
chr6 (1-234)||(9099017-9099248)
chr6 (1-160)||(21364427-21364584)
chr6 (1-160)||(23968409-23968566)
chr6 (1-109)||(11288614-11288721)
chr6 (41-109)||(15458492-15458560)
chr6 (41-109)||(15465087-15465155)
chr6 (1-142)||(31252390-31252535)
chr6 (1-84)||(28288455-28288537)
chr6 (49-111)||(10986173-10986235)
chr6 (41-111)||(34639971-34640041)
chr6 (41-111)||(34646645-34646715)
chr6 (56-111)||(29614146-29614201)
chr6 (57-111)||(4477858-4477912)
chr6 (57-111)||(23839199-23839253)
chr6 (49-111)||(24512836-24512898)
chr6 (41-74)||(24563475-24563508)
chr6 (56-108)||(12168366-12168418)
chr6 (56-108)||(19287275-19287327)
chr6 (56-108)||(19785869-19785921)
chr6 (56-108)||(19878459-19878511)
[»] scaffold0072 (1 HSPs)
scaffold0072 (3-246)||(49915-50161)
[»] chr4 (5 HSPs)
chr4 (41-246)||(16146815-16147020)
chr4 (59-169)||(14486602-14486713)
chr4 (49-114)||(27906263-27906328)
chr4 (41-108)||(53483708-53483775)
chr4 (55-111)||(15408140-15408196)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-169)||(939-1107)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-169)||(1856-2025)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-246)||(135304-135549)
[»] scaffold0348 (1 HSPs)
scaffold0348 (51-169)||(9278-9396)
[»] scaffold1469 (1 HSPs)
scaffold1469 (41-169)||(1297-1425)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-128)||(10222-10350)
[»] scaffold0384 (1 HSPs)
scaffold0384 (51-169)||(16059-16177)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-115)||(492972-493086)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-139)||(91148-91285)
scaffold0029 (1-139)||(96874-97011)
scaffold0029 (56-109)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (41-142)||(5842-5945)
[»] scaffold0553 (2 HSPs)
scaffold0553 (1-111)||(10139-10250)
scaffold0553 (52-84)||(11079-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (1-111)||(1469-1580)
[»] scaffold0183 (1 HSPs)
scaffold0183 (1-109)||(6-113)
[»] scaffold0249 (1 HSPs)
scaffold0249 (41-109)||(13879-13947)
[»] scaffold0720 (1 HSPs)
scaffold0720 (1-115)||(3346-3461)
[»] scaffold0261 (1 HSPs)
scaffold0261 (49-115)||(23562-23628)
[»] scaffold0026 (2 HSPs)
scaffold0026 (41-111)||(111686-111756)
scaffold0026 (56-111)||(11850-11905)
[»] scaffold0453 (1 HSPs)
scaffold0453 (52-115)||(10546-10609)
[»] scaffold0034 (1 HSPs)
scaffold0034 (49-115)||(73281-73347)
[»] scaffold2054 (1 HSPs)
scaffold2054 (56-109)||(717-770)
[»] scaffold1461 (1 HSPs)
scaffold1461 (57-115)||(1485-1543)
[»] scaffold0222 (1 HSPs)
scaffold0222 (57-130)||(16801-16875)
[»] scaffold0107 (1 HSPs)
scaffold0107 (49-111)||(40524-40586)
[»] scaffold0004 (1 HSPs)
scaffold0004 (57-130)||(116877-116951)
[»] scaffold0019 (1 HSPs)
scaffold0019 (55-111)||(135474-135530)
[»] scaffold0924 (1 HSPs)
scaffold0924 (56-111)||(750-805)
[»] scaffold0247 (1 HSPs)
scaffold0247 (56-111)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (56-111)||(30858-30913)
[»] scaffold0129 (1 HSPs)
scaffold0129 (41-108)||(45259-45326)
[»] scaffold0461 (1 HSPs)
scaffold0461 (57-130)||(8-82)
[»] scaffold0146 (1 HSPs)
scaffold0146 (57-130)||(13613-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (57-130)||(101928-102002)
[»] scaffold0235 (1 HSPs)
scaffold0235 (49-110)||(22585-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (55-111)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (59-111)||(14398-14450)


Alignment Details
Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 12033389 - 12033636
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  12033389 agaccaagagagaagaacttaggaactgatttgatgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataat 12033488  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-taa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||         |||||||||||||||||| |||    
T  12033489 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaattaagggttaatgatgattttgaaagaaaa-ggtataagaatcaggtttataa 12033587  T
Q  200 tgtcgtactttgatgattagtatgatttcttaatccatgttgatgatgt 248  Q
    ||| ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  12033588 tgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 12033636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17131843 - 17131595
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17131843 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 17131744  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||||| ||||||||| ||    
T  17131743 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtataaggatcaggtttata 17131645  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatgt 248  Q
    |||| ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  17131644 atgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 17131595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14865957 - 14865711
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  14865957 agaccaagagagaagaacttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaa 14865858  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||         ||| |||||| ||||||| ||    
T  14865857 tttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataatggttaatgatgattttgaaagaaaa-ggtgtaagaagcaggtttata 14865759  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
    |||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  14865758 atgttgtacttggatgattagtatgatttcttaatccatgttgttgat 14865711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 19235014 - 19235245
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||||||| ||  ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||    
T  19235014 agaccaagagagaagagcttaggaattgatttgctgcacttta-tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgat 19235112  T
Q  101 ttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||          || |||||||||||||| ||    
T  19235113 ttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctgaagaaaat--gtgtaagaatcaggtttata 19235210  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatc 234  Q
    |||| ||| ||||||||||||||||||||| |||||    
T  19235211 atgttgta-tttgatgattagtatgatttcctaatc 19235245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23370449 - 23370560
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||| | |||||||||||||||||||||| ||||| |||||| ||||||| || ||    
T  23370449 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataa 23370548  T
Q  100 tttctgaaaatt 111  Q
    ||||||||||||    
T  23370549 tttctgaaaatt 23370560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 51301659 - 51301572
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttc 128  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||| |||||||||  ||||||||||||||||||||||||| |||||    
T  51301659 tttgtcttcgcaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaattaatcaattgaattgttc 51301572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 13302190 - 13302331
Alignment:
Q  5 caagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttct 104  Q
    |||| |||| ||||||||||| ||||||| |||| |||| | | | ||||||||||||||||||| ||||||||||||||| |||||||||  |||||||    
T  13302190 caagggagatgaacctaggaactgatttgctgtgttttttt-tctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttct 13302288  T
Q  105 gaaaattaatcaattgaactgttctt-aaggtaaaattgggaa 146  Q
    ||||||||||||| || | ||||||| ||| |||||| |||||    
T  13302289 gaaaattaatcaaatgcattgttcttgaagataaaatggggaa 13302331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 13312846 - 13312987
Alignment:
Q  5 caagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttct 104  Q
    |||| |||| ||||||||||| ||||||| |||| |||| | | | ||||||||||||||||||| ||||||||||||||| |||||||||  ||||| |    
T  13312846 caagggagatgaacctaggaactgatttgctgtgttttttt-tctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaattttt 13312944  T
Q  105 gaaaattaatcaattgaactgttctt-aaggtaaaattgggaa 146  Q
    ||||||||||||| || | ||||||| ||| |||||| |||||    
T  13312945 gaaaattaatcaaatggattgttcttgaagataaaatagggaa 13312987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 13323737 - 13323848
Alignment:
Q  5 caagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttct 104  Q
    |||| |||||||||||||||| ||||||| ||   |||| | | | ||||||||||||||||||| ||||||||||||||| |||||||||  |||||||    
T  13323737 caagggagaagaacctaggaactgatttgctgatttttttt-tctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttct 13323835  T
Q  105 gaaaattaatcaa 117  Q
    |||||||||||||    
T  13323836 gaaaattaatcaa 13323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 10389428 - 10389502
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||| |||||    
T  10389428 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 10414517 - 10414591
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||| |||||    
T  10414517 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10414591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 10421187 - 10421261
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||| || |||||||||||| |||||    
T  10421187 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatc 10421261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 10555421 - 10555353
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtg 69  Q
    |||||||||||||||| | |||| |||||||||| || ||||||| ||| |||||||||||||||||||    
T  10555421 agaccaagagagaagagcttagggattgatttgtcgtacttttgtgtttacaattctaaggtaagggtg 10555353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 24933823 - 24933880
Alignment:
Q  51 caattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    ||||||||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  24933823 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 24933880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 9534382 - 9534328
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 9534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 17240513 - 17240587
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| || ||||| | |||||||||||||| ||| ||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 17240587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 18929300 - 18929246
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| |||| ||||| ||||||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 18929246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 20247791 - 20247843
Alignment:
Q  59 aggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20247843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 24193009 - 24192957
Alignment:
Q  59 aggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 24192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 41455097 - 41455149
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41455149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20851076 - 20851323
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20851076 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 20851175  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||||| ||||||||| ||    
T  20851176 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtataaggatcaggtttata 20851274  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
     ||| ||||||||||| ||||||||||||||||||| |||||| |||||    
T  20851275 ttgttgtactttgatgtttagtatgatttcttaatctatgttgttgatg 20851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20857703 - 20857950
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20857703 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 20857802  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||||| ||||||||| ||    
T  20857803 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtataaggatcaggtttata 20857901  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
     ||| ||||||||||| |||||||| |||||||||| |||||| |||||    
T  20857902 ttgttgtactttgatgtttagtatgttttcttaatctatgttgttgatg 20857950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 21706387 - 21706140
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21706387 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 21706288  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||||| ||||||||| ||    
T  21706287 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtataaggatcaggtttata 21706189  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
     ||| ||||||||||| |||||||| |||||||||| |||||| |||||    
T  21706188 ttgttgtactttgatgtttagtatgttttcttaatctatgttgttgatg 21706140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 21710929 - 21710760
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21710929 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 21710830  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttg 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  21710829 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggtttaagatgattttg 21710760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 20044946 - 20045004
Alignment:
Q  51 caattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    ||||||||||||||||||||||||||| ||||||  || ||||||| || |||||||||    
T  20044946 caattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 18712854 - 18712780
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||| ||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 18712780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 20437024 - 20437078
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 20437078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 32651627 - 32651573
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 32651573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 41112090 - 41112038
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 41112038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 79433 - 79680
Alignment:
Q  1 agaccaagagagaagaacctaggaattgattt-gttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatataca 98  Q
    |||||||||||||||||| |||||| |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  79433 agaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgta 79532  T
Q  99 atttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-t 197  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||| |    
T  79533 atttctgaaaattaatcaattaaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggtttat 79631  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
    ||||| ||| ||  |||||||||||||||||||||||||||||| ||||    
T  79632 aatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 79680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 24320614 - 24320861
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24320614 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 24320713  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||| | ||||||||| ||    
T  24320714 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtatagggatcaggtttata 24320812  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
     ||| ||||||||||| ||||||||||||||||||| |||||| |||||    
T  24320813 ttgttgtactttgatgtttagtatgatttcttaatctatgttgttgatg 24320861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 29643386 - 29643497
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttc-ttaaggtaaaattgggaaaataaggg 154  Q
    ||||||||||||| ||||||||||||||| |||||||||  |||||||||||||||||| ||||||| ||||| | ||| |||||||| | || ||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaattaatcaaattgaattgttcatgaagataaaattgag-aattaaggg 29643484  T
Q  155 ttaatgatgattt 167  Q
    || ||||||||||    
T  29643485 ttgatgatgattt 29643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 44477693 - 44477623
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||  ||||||||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  44477693 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44477623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 44492851 - 44492781
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||  ||||||||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  44492851 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 44492781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 18614327 - 18614240
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaat-caattgaactgttctt-aaggtaaaattg 142  Q
    ||||||||||||| || ||||| |||||| |||| ||||| |||||||||||||| || |||||||| ||||||| ||| ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattg 18614240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 23482053 - 23482127
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 8727735 - 8727787
Alignment:
Q  59 aggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||| |||||||  |||||| ||||||| || ||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaatt 8727787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 20906405 - 20906652
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| || ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20906405 agaccaagagagaagaacttaggaacggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 20906504  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||         ||||||||||||| |||| ||    
T  20906505 tttctgaaaattaatcaattgaactattcttaaggtaaaattggg-aattaagggttaatgatgattttgaaagaaaa-ggtataagaatcaagtttata 20906602  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatgt 248  Q
    |||| ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  20906603 atgttgtactttgatgtttagtatgatttcttaatctatgttgttgatgt 20906652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 16091187 - 16090940
Alignment:
Q  1 agaccaagagagaagaacctaggaattgattt-gttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatataca 98  Q
    |||||||||||||||||| |||||| |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  16091187 agaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgta 16091088  T
Q  99 atttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-t 197  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||         ||| |||||||||||||| |    
T  16091087 atttctgaaagttaatcaattaaactgttcctaaggtaaaattgggaaaataagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggtttat 16090989  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
    ||||| ||| ||  |||||||||||||||||||||||||||||| ||||    
T  16090988 aatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 16090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 29181052 - 29181299
Alignment:
Q  1 agaccaagagagaagaacctaggaattgattt-gttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatataca 98  Q
    |||||||||||||||||| |||||| |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  29181052 agaccaagagagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgta 29181151  T
Q  99 atttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcagg-tttt 197  Q
    ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||         ||| ||||||||||| || |    
T  29181152 atttctgaaaattaatcaattaaactattcttaaggtaaaatttggaaaataagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggcttat 29181250  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
    ||||| ||| ||  |||||||||||||||||||||||||||||| ||||    
T  29181251 aatgttgtatttgaatgattagtatgatttcttaatccatgttgttgat 29181299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2971365 - 2971209
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  2971365 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataa 2971266  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggtt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2971265 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaagataagggtt 2971209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 2465470 - 2465312
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | ||| ||||| |||| ||  ||||  ||||||||||||||||||||||||||||| ||| ||||||| | ||||||||  ||    
T  2465470 agaccaagagagaagagcttagaaattggtttgctgcacttta-tctttgcaattctaaggtaagggtgggatcatccttcaataatgataatatatgat 2465372  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatg 160  Q
    ||||||||||||| ||||| ||||||| ||| ||||||| | || |||| ||||||||||    
T  2465371 ttctgaaaattaagcaatttaactgtttttatggtaaaaattgggaaattagggttaatg 2465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14319573 - 14319688
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||| ||||||||||||| ||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |  |||| || ||    
T  14319573 agactaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataa 14319672  T
Q  100 tttctgaaaattaatc 115  Q
    ||||||||||||||||    
T  14319673 tttctgaaaattaatc 14319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14230892 - 14230777
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||| ||||| ||||||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||     |||| || ||    
T  14230892 agaccaagagaggagaacttaggaacggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataa 14230793  T
Q  100 tttctgaaaattaatc 115  Q
    ||||||||||||||||    
T  14230792 tttctgaaaattaatc 14230777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 2966898 - 2966828
Alignment:
Q  179 ggtataagaatcaggtttt-aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgatgt 248  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  2966898 ggtataagaatcaggtttttaatgttgtactttgatgattagtatgatttcttaatccatgttgttgatgt 2966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 31155464 - 31155396
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  31155464 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 3857357 - 3857447
Alignment:
Q  48 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttcttaaggtaaaa 139  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||||||  ||||||||||||||| ||||| ||||||| ||| |||||||    
T  3857357 ttgcaattctaaggtaagggtgggatcatctt-caataatgataatatatgatttctgaaaattaagcaatttaactgtttttatggtaaaa 3857447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14567315 - 14567246
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgc-ttttgtctttgcaattctaaggtaagggtg 69  Q
    |||||||||||||||||| ||||||  |||||| ||||| |||||||| | |||||||||||||||||||    
T  14567315 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtg 14567246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 11382871 - 11382925
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| |||||||||| ||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11382925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 11389348 - 11389402
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| |||||||||| ||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaatt 11389402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 21230952 - 21231014
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  21230952 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 21231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 14423040 - 14422985
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14422985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 16009631 - 16009577
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 16009577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 12590643 - 12590695
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12590695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 13007487 - 13007435
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 13007435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 20311050 - 20311106
Alignment:
Q  55 tctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||| || ||||| |||||| ||||||  || ||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaatt 20311106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 19237011 - 19236842
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19237011 agaccaagagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 19236912  T
Q  100 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttg 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||    
T  19236911 tttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttg 19236842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 22461267 - 22461020
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgc-ttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| || ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22461267 agaccaagagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 22461168  T
Q  100 tttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-t 197  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||           |||||||| ||||||||| |    
T  22461167 tttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattt--gaaagaaaaggtataaggatcaggtttat 22461070  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
    | ||||||||||||||| |||||||| ||||||| || |||||| |||||    
T  22461069 attgtcgtactttgatgtttagtatgttttcttattctatgttgttgatg 22461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 22467891 - 22467644
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgc-ttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| || ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22467891 agaccaagagagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataa 22467792  T
Q  100 tttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-t 197  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||           |||||||| ||||||||| |    
T  22467791 tttctgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattt--gaaagaaaaggtataaggatcaggtttat 22467694  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
    | ||||||||||||||| |||||||| ||||||| || |||||| |||||    
T  22467693 attgtcgtactttgatgtttagtatgttttcttattctatgttgttgatg 22467644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 20773078 - 20772854
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||    
T  20773078 agaccaagagagaagagcttaggaattgatttgctgtacttta-tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgat 20772980  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-taa 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||          || |||||||||||||| |||    
T  20772979 ttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttgaagaaaat--gtgtaagaatcaggtttataa 20772882  T
Q  200 tgtcgtactttgatgattagtatgatttc 228  Q
    ||| ||| |||||||||||||||||||||    
T  20772881 tgttgta-tttgatgattagtatgatttc 20772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20781853 - 20781686
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||    
T  20781853 agaccaagagagaagagcttaggaattgatttgctgtacttta-tctttgcaattctaaggtaagggtgggattatctttcaataattataatatatgat 20781755  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  20781754 ttctgaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattttg 20781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28909234 - 28909403
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||  ||    
T  28909234 agaccaagagagaagaacctaggaattgatttgctgtgcttttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgat 28909333  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || ||||||||||||    
T  28909334 ttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg 28909403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28945629 - 28945798
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||  ||    
T  28945629 agaccaagagagaagaacctaggaattgatttgctgtgcttttgtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgat 28945728  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || ||||||||||||    
T  28945729 ttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg 28945798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28895986 - 28896155
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||  ||    
T  28895986 agaccaagagagaagaacctaggaattgatttgctgtgcttttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgat 28896085  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || ||||||||||||    
T  28896086 ttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg 28896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28924812 - 28924981
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||  ||    
T  28924812 agaccaagagagaagaacctaggaattgatttgctgtgcttttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgat 28924911  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || ||||||||||||    
T  28924912 ttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg 28924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28889282 - 28889451
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||||||||||||||||||   |||||||| | |||||||||||||||||||||||||| ||||||||||||| ||| ||||  ||    
T  28889282 agaccaagagagaagaacctaggaattgatttgcattgcttttgccgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgat 28889381  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| | ||| || |||||||||||| |||||||||||||| ||| || ||||||||||||    
T  28889382 ttctgaaaattaaactatttaattgttcttaaggtaaaaattgggaaaattaggtttgatgatgattttg 28889451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 24929874 - 24930105
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||| ||| ||  ||||  ||||| |||||||||||||||||||||||||||||||||||||  |||||||  ||    
T  24929874 agaccaagagagaagagcttaggaattgacttgctgcacttta-tctttacaattctaaggtaagggtgggattatctttcaatagttctaatatatgat 24929972  T
Q  101 ttctgaaaa-ttaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||          || |||||||||||||| ||    
T  24929973 ttctaaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctgaaggaaat--gtgtaagaatcaggtttata 24930070  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatc 234  Q
    |||| ||| ||||||||||||||||||||| |||||    
T  24930071 atgttgta-tttgatgattagtatgatttcctaatc 24930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 20820279 - 20820159
Alignment:
Q  48 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 147  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20820279 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20820181  T
Q  148 ataagggttaatgatgattttg 169  Q
    || |||||||||||||||||||    
T  20820180 attagggttaatgatgattttg 20820159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 20827379 - 20827259
Alignment:
Q  48 ttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaa 147  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||  |||||  |||| ||| ||||||||||||||||| |||||    
T  20827379 ttgcaattctaaggtaagggtgggatcatctttcaatagtgttaatatataatttctgatgattaagtaattcaaccgttcttaaggtaaaatt-ggaaa 20827281  T
Q  148 ataagggttaatgatgattttg 169  Q
    || |||||||||||||||||||    
T  20827280 attagggttaatgatgattttg 20827259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 18407944 - 18408018
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| |||||||||| |||||||||||||| ||| ||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattgaattgttctt 18408018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 34830146 - 34830081
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||||||||||||||||||||||||||||||||| |  |||| || ||||||||||||| ||||    
T  34830146 tgcaattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaatcaatc 34830081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 23111200 - 23111274
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23111274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 22438746 - 22438802
Alignment:
Q  55 tctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaatt 22438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 38144536 - 38144591
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 38144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 19512441 - 19512387
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 19512387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 28370055 - 28370109
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 28370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 23528686 - 23528634
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 23528634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 25180880 - 25181121
Alignment:
Q  8 gagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctga 106  Q
    ||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25180880 gagagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctga 25180979  T
Q  107 aaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-taatgtcgt 205  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         ||||||   ||||||||| || | | ||    
T  25180980 aaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtatattgatcaggtttatatttttgt 25181078  T
Q  206 actttgatgattagtatgatttcttaatccatgttgatgatgt 248  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||    
T  25181079 actttgatgtttagtatgatttcttaatctatgttgttgatgt 25181121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 247
Target Start/End: Complemental strand, 10679 - 10441
Alignment:
Q  10 gagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||| || |||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10679 gagaaggacttaggaactgatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 10580  T
Q  109 attaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-taatgtcgtac 207  Q
    |||||||||||||| |||||||||||||||||||||||| | |||||||| ||||||||||         |||||| | || |||||| || ||| ||||    
T  10579 attaatcaattgaattgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtatagggataaggtttatattgttgtac 10481  T
Q  208 tttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
    ||||||| ||||||||||||||||||| |||||| |||||    
T  10480 tttgatgtttagtatgatttcttaatctatgttgttgatg 10441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27207663 - 27207778
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |  |||| || ||    
T  27207663 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataa 27207762  T
Q  100 tttctgaaaattaatc 115  Q
    ||||||||||||||||    
T  27207763 tttctgaaaattaatc 27207778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 26885291 - 26885179
Alignment:
Q  3 accaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatt 101  Q
    |||||||||||||||| ||||||  |||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| || |||| || ||||    
T  26885291 accaagagagaagaacttaggaacggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatt 26885193  T
Q  102 tctgaaaattaatc 115  Q
    ||||||||||||||    
T  26885192 tctgaaaattaatc 26885179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23168243 - 23168351
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||| |||| |  | |||| ||||||||||| | |||||||||||||||||||||||||||||||||| |  ||||||| || |||    
T  23168243 agaccaagagagaagaacttagggacggttttgctgtgcttttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataat 23168342  T
Q  101 ttctgaaaa 109  Q
    |||||||||    
T  23168343 ttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23579500 - 23579608
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||| |||| |  | |||| ||||||||||| | |||||||||||||||||||||||||||||||||| |  ||||||| || |||    
T  23579500 agaccaagagagaagaacttagggacggttttgctgtgcttttgtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataat 23579599  T
Q  101 ttctgaaaa 109  Q
    |||||||||    
T  23579600 ttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 23265197 - 23265123
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23265123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 23280265 - 23280191
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 23280191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 5706008 - 5706075
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||| |||||||||||||||||||| || ||||| ||| || ||||||| || |||| ||||||    
T  5706008 tttgtcttcgcaattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa 5706075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 6483772 - 6483718
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6483718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 6487239 - 6487185
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 6487185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 21908414 - 21908360
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| |||| ||||| ||||||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaatt 21908360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 27366533 - 27366566
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggatt 74  Q
    ||||||||||||||||||||||||||||| ||||    
T  27366533 tttgtctttgcaattctaaggtaagggtgagatt 27366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 26583882 - 26583830
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 26583830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 20007891 - 20008138
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||| |||||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  20007891 agaccaagagagaagaacttaggaactcatttgctgtgcttttgtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataat 20007990  T
Q  101 ttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    || || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||         |||||||| ||||||||| ||    
T  20007991 ttatgaaaaattaatcaattgaactgttcttaaggtaaaattgggaaatttagggttaaggatgattttgaaagaaaa-ggtataaggatcaggtttata 20008089  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgatg 247  Q
     ||| ||||||||||| |||||||| |||||||||| || ||| |||||    
T  20008090 ttgttgtactttgatgtttagtatgttttcttaatctatattgttgatg 20008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 9099017 - 9099248
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||||||| ||  ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||    
T  9099017 agaccaagagagaagagcttaggaattgatttgctgcacttta-tctttgcaattctaaggtaagggtgggattatctttcaatagttataatatatgat 9099115  T
Q  101 ttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||          || |||||||||||||| ||    
T  9099116 ttctgaaaaattaatcaatttaactgttcttaaggtaaaattgggaaatttagggttaatgatgattctgaagaaaat--gtgtaagaatcaggtttata 9099213  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatc 234  Q
    |||| ||| ||||||||||||||||||||| |||||    
T  9099214 atgttgta-tttgatgattagtatgatttcctaatc 9099248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 21364427 - 21364584
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |||| || | ||||||||  ||    
T  21364427 agaccaagagagaagaacctaggaattgttttgctgtgcttttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgat 21364526  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatg 160  Q
    ||||||||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||    
T  21364527 ttctgaaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg 21364584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 23968409 - 23968566
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |||| || | ||||||||  ||    
T  23968409 agaccaagagagaagaacctaggaattgttttgctgtgcttttgtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgat 23968508  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatg 160  Q
    ||||||||||||| ||||| ||||||| ||| |||||||||||| |||| ||||||||||    
T  23968509 ttctgaaaattaagcaatttaactgtt-ttatggtaaaattggg-aaattagggttaatg 23968566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 11288614 - 11288721
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||| ||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||  || ||||||| |||    
T  11288614 agaccaagagagaagagcttaggaactgatt-gctgtgtttttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataat 11288712  T
Q  101 ttctgaaaa 109  Q
    |||||||||    
T  11288713 ttctgaaaa 11288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 15458560 - 15458492
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  15458560 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 15465155 - 15465087
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  15465155 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 31252535 - 31252390
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttt---tgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatac 97  Q
    |||||||||||||||||| ||||||  |||| | |||| |||   ||||||||||||||||||||||||||| |||||||||| |||  | ||||||||     
T  31252535 agaccaagagagaagaacttaggaaccgatt-gctgtgttttctttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatat 31252437  T
Q  98 aatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattg 142  Q
    |||||||||||||||||| |||||||  |||||| ||| ||||||||    
T  31252436 aatttctgaaaattaatctaattgaatagttcttgaagataaaattg 31252390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28288455 - 28288537
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaat 84  Q
    |||||||||||||| | | |||||| ||||| | |||| |||||||||||||||||||||||||||||| || ||||| |||||    
T  28288455 agaccaagagagaaaagcttaggaactgatt-gctgtgtttttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 10986173 - 10986235
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||||||||| || |||||||||||| ||||||| || ||||||| ||||||    
T  10986173 tgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaatt 10986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 34639971 - 34640041
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||| |||||||||||||||||||| || ||||| |||||| || |||| || ||||||||||||||    
T  34639971 tttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34640041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 34646645 - 34646715
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||| |||||||||||||||||||| || ||||| |||||| || |||| || ||||||||||||||    
T  34646645 tttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaatt 34646715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 29614146 - 29614201
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 29614201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 4477912 - 4477858
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 4477858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 23839253 - 23839199
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 23839199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 24512836 - 24512898
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||| |||||||| |||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  24512836 tgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaatt 24512898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 24563508 - 24563475
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggatt 74  Q
    ||||||||||||||||||||||||||||| ||||    
T  24563508 tttgtctttgcaattctaaggtaagggtgagatt 24563475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 12168418 - 12168366
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 12168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 19287327 - 19287275
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 19785869 - 19785921
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19785921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 19878511 - 19878459
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||||||||| || ||||| |||||| ||||||| || |||||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 19878459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 246
Target Start/End: Original strand, 49915 - 50161
Alignment:
Q  3 accaagagagaagaacctaggaattgattt-gttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| |||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  49915 accaagagagaagaacttaggaactgattttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaat 50014  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggt-aaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-ta 198  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||         ||| |||||||||||||| ||    
T  50015 ttctaaaaattaatcaattaaactgttcttaaggtaaaaattgggaaaataagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggtttata 50113  T
Q  199 atgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
    ||||  || ||  | |||||||||||||||||||||||||||| ||||    
T  50114 atgttatatttgaaagattagtatgatttcttaatccatgttgttgat 50161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 1e-65; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 16146815 - 16147020
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttcttaaggtaaaat 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  16146815 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaattaatcaattaaactgttcttaaggtaaaat 16146914  T
Q  141 tgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-taatgtcgtactttgatgattagtatgatttcttaatccatgt 239  Q
    | |||||||||||||||||||||||||||         ||| |||||||||||||| |||||| ||| ||  ||||||||||||||||||||||||||||    
T  16146915 ttggaaaataagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggtttataatgttgtatttgaatgattagtatgatttcttaatccatgt 16147013  T
Q  240 tgatgat 246  Q
    || ||||    
T  16147014 tgttgat 16147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 14486713 - 14486602
Alignment:
Q  59 aggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt-aaggtaaaattgggaaaataagggtt 156  Q
    ||||||||||| || |||| ||||||  |||||||||| |||||||||||||||||| ||||||| ||||||| ||| |||||||||||| || ||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaaattgggaatat-agggtt 14486615  T
Q  157 aatgatgattttg 169  Q
     ||||||||||||    
T  14486614 gatgatgattttg 14486602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 27906328 - 27906263
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaat 114  Q
    |||||||||||| |||||||||||||||||||||||  ||||||| || |||||||||||||||||    
T  27906328 tgcaattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaat 27906263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 53483775 - 53483708
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||| |||||||||||||||||||| || ||||| |||||| ||||||| || |||| ||||||    
T  53483775 tttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 53483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 15408196 - 15408140
Alignment:
Q  55 tctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 15408140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1107 - 939
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||  ||    
T  1107 agaccaagagagaagaacctaggaattgatttgctgtgcttttgtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgat 1008  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||  |||||||    
T  1007 ttctgaaaattaagcaatttaactgttcttatggtaaaattgggaaaattagggttaatggcgattttg 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1856 - 2025
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  1856 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataa 1955  T
Q  100 tttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttg 169  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||||||||    
T  1956 tttctgaaaattaatcaattgaactgttcttgaaagtaaaattggg-aattaagggttaatgatgattttg 2025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 135549 - 135304
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgct-tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||| | |||||| ||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||    
T  135549 agaccaagagagaagagcttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataa 135450  T
Q  100 tttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaataagggttaatgatgattttgnnnnnnnngggtataagaatcaggttt-t 197  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | || |||||||||||||||||||||         ||| |||||||||||||| |    
T  135449 tttctgaaaattaatcaattgaactgttcttaaaggtaaaattgag-aattaagggttaatgatgattttgaaagaaaa-ggtgtaagaatcaggtttat 135352  T
Q  198 aatgtcgtactttgatgattagtatgatttcttaatccatgttgatgat 246  Q
      ||| ||| ||||||| ||||||||||||||||||| |||||| ||||    
T  135351 tgtgttgtaatttgatg-ttagtatgatttcttaatctatgttgttgat 135304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 51 - 169
Target Start/End: Complemental strand, 9396 - 9278
Alignment:
Q  51 caattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttctt-aaggtaaaattgggaaaat 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| || |    
T  9396 caattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaattaatcaattgaactgttcttaaaagtaaaattggg-aatt 9298  T
Q  150 aagggttaatgatgattttg 169  Q
    ||||||||||||||||||||    
T  9297 aagggttaatgatgattttg 9278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 1425 - 1297
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatcaattgaactgttcttaaggtaaaat 140  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||  |||||||   |||||||||||||| ||||| ||||||||||||||||||||    
T  1425 tttgtctttgcaattctaaggtaagggtgggatttcctttcaatagtgttaatatatgctttctgaaaattaaacaatttaactgttcttaaggtaaaat 1326  T
Q  141 tgggaaaataagggttaatgatgattttg 169  Q
    ||||||||| |||  ||||||||||||||    
T  1325 tgggaaaattaggtctaatgatgattttg 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 10350 - 10222
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||| | ||||||||||||||||||| ||||||||| ||||| |||||||||  ||    
T  10350 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaa 10251  T
Q  100 tttctgaaaattaatcaattgaactgttc 128  Q
    ||||||||||||||||||||||| |||||    
T  10250 tttctgaaaattaatcaattgaattgttc 10222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 169
Target Start/End: Original strand, 16059 - 16177
Alignment:
Q  51 caattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctg-aaaattaatcaattgaactgttcttaaggtaaaattgggaaaat 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||| |||||||||||||| ||||||| ||||| ||||| | || || |    
T  16059 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaaattaatcaatttaactgtttttaagataaaaattgg-aatt 16157  T
Q  150 aagggttaatgatgattttg 169  Q
     |||||||||||||||||||    
T  16158 tagggttaatgatgattttg 16177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 492972 - 493086
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||| || |||| || ||    
T  492972 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataa 493070  T
Q  100 tttctgaaaattaatc 115  Q
    ||||||||||||||||    
T  493071 tttctgaaaattaatc 493086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 91148 - 91285
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | ||| ||||| |||| ||  ||||  ||||||||||||||||||||||||||||| ||||||||||| | ||||||||  ||    
T  91148 agaccaagagagaagagcttagaaattggtttgctgcacttta-tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgat 91246  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaa 139  Q
    ||||||||||||| ||||| ||||||| ||| |||||||    
T  91247 ttctgaaaattaagcaatttaactgtttttatggtaaaa 91285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 96874 - 97011
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | ||| ||||| |||| ||  ||||  ||||||||||||||||||||||||||||| ||||||||||| | ||||||||  ||    
T  96874 agaccaagagagaagagcttagaaattggtttgctgcacttta-tctttgcaattctaaggtaagggtgggatcatctttcaataatgataatatatgat 96972  T
Q  101 ttctgaaaattaatcaattgaactgttcttaaggtaaaa 139  Q
    ||||||||||||| ||||| ||||||| ||| |||||||    
T  96973 ttctgaaaattaagcaatttaactgtttttatggtaaaa 97011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 111938 - 111885
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 5842 - 5945
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt-aaggtaaa 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||| |||||||  |||||| ||| ||||    
T  5842 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T
Q  139 attg 142  Q
    ||||    
T  5942 attg 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10139 - 10250
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||| | |||||||||||||||||||||| ||||| |||||| ||||||| || ||    
T  10139 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataa 10238  T
Q  100 tttctgaaaatt 111  Q
    ||||||||||||    
T  10239 tttctgaaaatt 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 11079 - 11111
Alignment:
Q  52 aattctaaggtaagggtgggattatctttcaat 84  Q
    |||||||||||||||||||||||||| ||||||    
T  11079 aattctaaggtaagggtgggattatccttcaat 11111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1469 - 1580
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||||||||| ||||||  |||||| ||||||||| |||| | |||||||||||||||||||||| ||||| |||||| ||||||| || ||    
T  1469 agaccaagagagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataa 1568  T
Q  100 tttctgaaaatt 111  Q
    ||||||||||||    
T  1569 tttctgaaaatt 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 113 - 6
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgcttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaat 100  Q
    |||||||||||||||| | |||||||||| ||| ||  ||||  |||||||||||||||||||||||||||||||||||||||||||  |||||||  ||    
T  113 agaccaagagagaagagcttaggaattgacttgctgcacttta-tctttgcaattctaaggtaagggtgggattatctttcaatagttctaatatatgat 15  T
Q  101 ttctgaaaa 109  Q
    |||||||||    
T  14 ttctgaaaa 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 13879 - 13947
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||||||||    
T  13879 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3346 - 3461
Alignment:
Q  1 agaccaagagagaagaacctaggaattgatttgttgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaa 99  Q
    |||||||||||| ||||| ||||||  ||||||  |||||||| ||||||||||||||||||||||||||  |||||||||||||     ||||||| ||    
T  3346 agaccaagagaggagaacttaggaacggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataa 3445  T
Q  100 tttctgaaaattaatc 115  Q
    ||||||||||||||||    
T  3446 tttctgaaaattaatc 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 23562 - 23628
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    |||||||||||||||||||||||||||||||| |||  ||||||| || ||||||||||||||||||    
T  23562 tgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatc 23628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 111756 - 111686
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||| |||||||||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  111756 tttgtcttcgcaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 11850 - 11905
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 10546 - 10609
Alignment:
Q  52 aattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    |||||||||||||| ||||||||||||||||||  || |||| || ||||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatc 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 73347 - 73281
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||| || ||||| ||||||||||||    
T  73347 tgcaattatgaggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatc 73281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaa 109  Q
    |||||||||||||||||||||||||||||  || ||||||| ||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 1485 - 1543
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc 115  Q
    ||||||||||||| ||||||||| ||||  || |||||| |||||||||||||||||||    
T  1485 taaggtaagggtgagattatcttgcaatgatcttaatatgcaatttctgaaaattaatc 1543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 16875 - 16801
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 16801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 40524 - 40586
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||| ||||||||||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  40524 tgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 40586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 116951 - 116877
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||||||||||||| ||| ||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattgaattgttctt 116877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 135530 - 135474
Alignment:
Q  55 tctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||| || ||||| |||||| ||||| |||| ||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaatt 135474  T

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Target: scaffold0924 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 750 - 805
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 805  T

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Target: scaffold0247 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 11397 - 11342
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 11342  T

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Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 30913 - 30858
Alignment:
Q  56 ctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    |||||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 30858  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 108
Target Start/End: Original strand, 45259 - 45326
Alignment:
Q  41 tttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaa 108  Q
    |||||||| |||| ||||||||||||||| || ||||| |||||| ||||||| || |||| ||||||    
T  45259 tttgtcttcgcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 45326  T

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Target: scaffold0461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 8 - 82
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| || ||||| | |||||||||||||| ||| ||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 82  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 13687 - 13613
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| || ||||| | |||||||||||||| ||| ||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattgaattgttctt 13613  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 101928 - 102002
Alignment:
Q  57 taaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaattaatc-aattgaactgttctt 130  Q
    ||||||||||||| || ||||| |||||| ||||| |||| |||| ||||||||| ||| ||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattgaattgttctt 102002  T

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Target: scaffold0235 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 22585 - 22646
Alignment:
Q  49 tgcaattctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaat 110  Q
    ||||| || |||||||||||| || ||||| |||||| ||||| |||| |||||||||||||    
T  22585 tgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0310 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 17700 - 17644
Alignment:
Q  55 tctaaggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||||||| || ||||| ||||||  |||||| || ||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaatt 17644  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 14398 - 14450
Alignment:
Q  59 aggtaagggtgggattatctttcaatagtcataatatacaatttctgaaaatt 111  Q
    ||||||||||| || ||||| |||||| ||||||| || ||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 14450  T

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