View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15347_low_19 (Length: 203)
Name: NF15347_low_19
Description: NF15347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15347_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 18223840 - 18224012
Alignment:
| Q |
17 |
aaggtaacatccatgctttgtctttttaatgctataccaatcacaaagggtaagggtgatgtctaacttttggtgttttcccttttttgacaatgaaatg |
116 |
Q |
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| T |
18223840 |
aaggtaacatccatgctttgtcttttcaatgctataccaatcacaaagggtaagggtgatgtctaacttttggtgttttcccttttttgacaatgaaatg |
18223939 |
T |
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| Q |
117 |
aaagaataagacgataaagtaaatacattnnnnnnntagttagagtatatgacaaaaatgtataataattgtg |
189 |
Q |
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| T |
18223940 |
aaagaataagacgataaagtaaatacattaaaaaaatagttagagtatatgacaaaaatgtataataattgtg |
18224012 |
T |
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