View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15348_high_7 (Length: 308)

Name: NF15348_high_7
Description: NF15348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15348_high_7
NF15348_high_7
[»] chr7 (56 HSPs)
chr7 (74-203)||(15328496-15328625)
chr7 (1-55)||(15328620-15328675)
chr7 (245-289)||(15328442-15328486)
chr7 (99-164)||(24973873-24973938)
chr7 (115-164)||(24975833-24975882)
chr7 (117-161)||(33894555-33894599)
chr7 (104-148)||(43152983-43153027)
chr7 (114-161)||(5373157-5373204)
chr7 (114-164)||(7244631-7244681)
chr7 (104-162)||(30496635-30496693)
chr7 (114-164)||(46213732-46213782)
chr7 (119-164)||(3610836-3610881)
chr7 (104-161)||(5276156-5276213)
chr7 (120-161)||(22388001-22388042)
chr7 (99-156)||(35536044-35536101)
chr7 (119-163)||(2013129-2013173)
chr7 (116-148)||(2767271-2767303)
chr7 (117-165)||(4591470-4591518)
chr7 (99-159)||(12835013-12835073)
chr7 (108-148)||(42656460-42656500)
chr7 (99-159)||(46091530-46091590)
chr7 (116-164)||(47006977-47007025)
chr7 (99-154)||(1417203-1417258)
chr7 (104-163)||(2223078-2223137)
chr7 (104-143)||(2999141-2999180)
chr7 (104-163)||(21853197-21853256)
chr7 (114-157)||(31341130-31341173)
chr7 (99-142)||(39591543-39591586)
chr7 (109-164)||(49060469-49060524)
chr7 (99-164)||(3802215-3802278)
chr7 (114-148)||(28178914-28178948)
chr7 (104-154)||(28613615-28613665)
chr7 (104-142)||(34083606-34083644)
chr7 (118-160)||(35808999-35809041)
chr7 (112-162)||(37832228-37832278)
chr7 (109-143)||(40689072-40689106)
chr7 (109-151)||(45004708-45004750)
chr7 (114-164)||(45593810-45593860)
chr7 (113-162)||(2894748-2894797)
chr7 (104-153)||(6824858-6824907)
chr7 (115-164)||(7513563-7513612)
chr7 (115-164)||(8445215-8445264)
chr7 (99-164)||(26935626-26935691)
chr7 (120-165)||(27481391-27481436)
chr7 (104-161)||(28165023-28165080)
chr7 (128-165)||(36537860-36537897)
chr7 (111-164)||(44241789-44241842)
chr7 (114-163)||(46223163-46223212)
chr7 (115-143)||(2727452-2727480)
chr7 (114-154)||(4572537-4572577)
chr7 (116-164)||(27492724-27492772)
chr7 (114-162)||(30133980-30134028)
chr7 (99-143)||(30456526-30456570)
chr7 (104-156)||(40009407-40009459)
chr7 (110-158)||(43328184-43328232)
chr7 (114-158)||(45813271-45813315)
[»] chr2 (72 HSPs)
chr2 (104-162)||(36114604-36114662)
chr2 (97-165)||(11344358-11344426)
chr2 (117-164)||(32837240-32837287)
chr2 (110-164)||(33267603-33267657)
chr2 (99-164)||(3673736-3673801)
chr2 (114-162)||(25609727-25609775)
chr2 (110-157)||(5133708-5133755)
chr2 (106-161)||(11393738-11393793)
chr2 (106-161)||(11410399-11410454)
chr2 (110-161)||(18962125-18962176)
chr2 (109-164)||(31461367-31461422)
chr2 (115-162)||(34054993-34055040)
chr2 (104-162)||(3611157-3611215)
chr2 (99-165)||(10150683-10150749)
chr2 (114-164)||(13864579-13864629)
chr2 (114-164)||(17952792-17952842)
chr2 (114-164)||(33197330-33197380)
chr2 (114-164)||(35329910-35329960)
chr2 (104-142)||(39567854-39567892)
chr2 (104-154)||(42457887-42457937)
chr2 (99-162)||(44600470-44600535)
chr2 (109-162)||(4026748-4026801)
chr2 (114-159)||(12215741-12215786)
chr2 (117-162)||(12785815-12785860)
chr2 (124-165)||(14845081-14845122)
chr2 (116-161)||(26522717-26522762)
chr2 (120-161)||(41033047-41033088)
chr2 (114-162)||(10143103-10143151)
chr2 (116-164)||(10190208-10190256)
chr2 (114-161)||(5045248-5045295)
chr2 (114-165)||(5903229-5903280)
chr2 (104-155)||(8820354-8820405)
chr2 (116-155)||(9833093-9833132)
chr2 (114-165)||(10769669-10769720)
chr2 (113-160)||(30990459-30990506)
chr2 (114-157)||(32098399-32098442)
chr2 (114-161)||(37474688-37474735)
chr2 (114-161)||(38239642-38239689)
chr2 (110-148)||(5998789-5998827)
chr2 (120-162)||(7936957-7936999)
chr2 (109-151)||(20933697-20933739)
chr2 (114-164)||(28803597-28803647)
chr2 (119-165)||(28933752-28933798)
chr2 (114-164)||(34339052-34339102)
chr2 (104-162)||(36114350-36114408)
chr2 (114-164)||(37053523-37053573)
chr2 (127-165)||(37518928-37518966)
chr2 (115-165)||(44606180-44606230)
chr2 (104-161)||(2416245-2416302)
chr2 (109-142)||(3932301-3932334)
chr2 (109-162)||(7825183-7825236)
chr2 (114-163)||(14277985-14278034)
chr2 (110-163)||(28902007-28902060)
chr2 (114-155)||(37033982-37034023)
chr2 (99-148)||(40837504-40837553)
chr2 (116-161)||(41039739-41039784)
chr2 (110-143)||(41407025-41407058)
chr2 (104-149)||(41407245-41407290)
chr2 (115-164)||(43163474-43163522)
chr2 (109-142)||(43199365-43199398)
chr2 (114-142)||(1939423-1939451)
chr2 (116-164)||(9478228-9478276)
chr2 (116-164)||(11393459-11393507)
chr2 (116-164)||(11410120-11410168)
chr2 (109-157)||(12970936-12970984)
chr2 (116-156)||(32821746-32821786)
chr2 (104-164)||(35459839-35459899)
chr2 (104-148)||(40758968-40759012)
chr2 (117-157)||(41809337-41809377)
chr2 (104-148)||(42907304-42907348)
chr2 (104-148)||(43259779-43259823)
chr2 (118-162)||(44443251-44443295)
[»] chr8 (46 HSPs)
chr8 (104-164)||(14482131-14482191)
chr8 (110-162)||(26215427-26215479)
chr8 (104-163)||(42597331-42597390)
chr8 (99-164)||(7026660-7026725)
chr8 (104-160)||(1112786-1112842)
chr8 (109-161)||(4558730-4558782)
chr8 (116-164)||(10727126-10727174)
chr8 (115-163)||(11569551-11569599)
chr8 (104-143)||(32976367-32976406)
chr8 (114-165)||(39866828-39866879)
chr8 (109-155)||(3936787-3936833)
chr8 (104-162)||(7646137-7646195)
chr8 (110-164)||(35453710-35453764)
chr8 (104-162)||(37152971-37153029)
chr8 (104-162)||(37444496-37444554)
chr8 (114-164)||(39392752-39392802)
chr8 (114-164)||(40728509-40728559)
chr8 (117-162)||(10114421-10114466)
chr8 (115-164)||(35298570-35298619)
chr8 (116-164)||(11188248-11188296)
chr8 (114-166)||(26370915-26370967)
chr8 (99-162)||(14280477-14280540)
chr8 (113-143)||(9956902-9956932)
chr8 (110-164)||(12972785-12972839)
chr8 (114-164)||(29699183-29699233)
chr8 (114-164)||(35534952-35535002)
chr8 (104-162)||(37353330-37353387)
chr8 (114-164)||(40356800-40356850)
chr8 (127-164)||(8536152-8536189)
chr8 (118-163)||(14929211-14929256)
chr8 (109-162)||(21653012-21653065)
chr8 (116-164)||(26813897-26813946)
chr8 (97-154)||(31915343-31915400)
chr8 (104-161)||(34770824-34770881)
chr8 (99-164)||(40280281-40280346)
chr8 (99-136)||(42237498-42237535)
chr8 (119-164)||(43812454-43812499)
chr8 (113-142)||(43908763-43908792)
chr8 (114-162)||(926418-926466)
chr8 (114-142)||(8799356-8799384)
chr8 (104-148)||(11000642-11000686)
chr8 (114-142)||(11119090-11119118)
chr8 (109-149)||(12976157-12976197)
chr8 (114-142)||(26820150-26820178)
chr8 (114-162)||(34522147-34522195)
chr8 (99-143)||(35374449-35374493)
[»] chr4 (68 HSPs)
chr4 (109-165)||(4471099-4471155)
chr4 (109-162)||(23503490-23503543)
chr4 (99-164)||(30024629-30024694)
chr4 (114-164)||(18630609-18630659)
chr4 (114-164)||(36734822-36734872)
chr4 (114-164)||(47970247-47970297)
chr4 (104-161)||(17884000-17884057)
chr4 (120-164)||(4191668-4191712)
chr4 (110-158)||(30338679-30338727)
chr4 (114-161)||(4798650-4798697)
chr4 (114-161)||(21593102-21593149)
chr4 (110-161)||(21683566-21683617)
chr4 (114-161)||(51044550-51044597)
chr4 (109-155)||(6364087-6364133)
chr4 (110-164)||(28623218-28623272)
chr4 (114-164)||(32724048-32724098)
chr4 (114-164)||(51555958-51556008)
chr4 (114-164)||(54325128-54325178)
chr4 (104-153)||(3155543-3155592)
chr4 (103-164)||(41088313-41088374)
chr4 (110-162)||(11389457-11389509)
chr4 (114-162)||(21952506-21952554)
chr4 (109-157)||(24160926-24160974)
chr4 (118-166)||(40709475-40709523)
chr4 (99-143)||(41701517-41701561)
chr4 (110-142)||(47800581-47800613)
chr4 (116-164)||(49619172-49619220)
chr4 (109-164)||(4071812-4071866)
chr4 (114-157)||(25487636-25487679)
chr4 (104-155)||(26520310-26520361)
chr4 (116-163)||(32066502-32066549)
chr4 (99-162)||(42321955-42322018)
chr4 (111-162)||(42641721-42641772)
chr4 (110-164)||(5219587-5219641)
chr4 (104-162)||(7601690-7601748)
chr4 (114-164)||(8422928-8422978)
chr4 (104-142)||(13216285-13216323)
chr4 (114-164)||(19422347-19422397)
chr4 (111-160)||(25548194-25548241)
chr4 (114-164)||(44319879-44319928)
chr4 (121-163)||(46176104-46176146)
chr4 (104-146)||(52746921-52746962)
chr4 (109-162)||(679185-679238)
chr4 (127-164)||(2980575-2980612)
chr4 (114-159)||(3662283-3662327)
chr4 (109-162)||(9680595-9680648)
chr4 (114-163)||(20907103-20907152)
chr4 (114-143)||(20936093-20936122)
chr4 (99-164)||(22684592-22684657)
chr4 (114-143)||(24929443-24929472)
chr4 (117-166)||(24936237-24936286)
chr4 (115-164)||(27405980-27406029)
chr4 (104-164)||(32920481-32920539)
chr4 (119-164)||(45128406-45128451)
chr4 (109-154)||(52735061-52735106)
chr4 (103-148)||(56480293-56480338)
chr4 (116-160)||(486014-486058)
chr4 (104-168)||(1404347-1404411)
chr4 (116-164)||(24160588-24160636)
chr4 (104-140)||(25885812-25885848)
chr4 (109-149)||(31851398-31851438)
chr4 (104-148)||(34368822-34368866)
chr4 (114-162)||(36048731-36048778)
chr4 (109-161)||(39438622-39438674)
chr4 (116-164)||(41603484-41603532)
chr4 (109-157)||(44138495-44138543)
chr4 (129-165)||(46176241-46176277)
chr4 (116-164)||(46796947-46796995)
[»] scaffold0590 (1 HSPs)
scaffold0590 (114-164)||(1165-1215)
[»] scaffold0275 (1 HSPs)
scaffold0275 (114-164)||(2760-2810)
[»] chr6 (54 HSPs)
chr6 (116-164)||(1810393-1810441)
chr6 (104-162)||(264302-264360)
chr6 (104-162)||(4006645-4006703)
chr6 (104-162)||(9093637-9093695)
chr6 (110-164)||(33911368-33911422)
chr6 (104-164)||(8349745-8349805)
chr6 (112-159)||(507154-507201)
chr6 (114-161)||(2514634-2514681)
chr6 (109-164)||(4248887-4248942)
chr6 (120-163)||(31461608-31461651)
chr6 (99-157)||(29274305-29274363)
chr6 (114-164)||(32861357-32861407)
chr6 (110-143)||(1402946-1402979)
chr6 (120-161)||(4247731-4247772)
chr6 (111-164)||(11340713-11340766)
chr6 (104-165)||(24836280-24836341)
chr6 (119-164)||(31668781-31668826)
chr6 (116-164)||(3169338-3169386)
chr6 (114-162)||(3171522-3171570)
chr6 (104-164)||(9732405-9732465)
chr6 (116-164)||(10452453-10452501)
chr6 (104-164)||(29269825-29269885)
chr6 (109-148)||(2735014-2735053)
chr6 (104-163)||(20671946-20672005)
chr6 (114-161)||(24774690-24774737)
chr6 (114-165)||(29940724-29940775)
chr6 (116-163)||(32917156-32917203)
chr6 (121-164)||(33259745-33259788)
chr6 (114-164)||(3204633-3204683)
chr6 (104-162)||(9559622-9559680)
chr6 (110-164)||(10016474-10016528)
chr6 (114-164)||(13360664-13360714)
chr6 (114-160)||(21959661-21959707)
chr6 (118-160)||(33416318-33416360)
chr6 (114-163)||(781315-781364)
chr6 (120-165)||(7148595-7148640)
chr6 (99-164)||(7713954-7714019)
chr6 (109-142)||(10749314-10749347)
chr6 (114-143)||(30865432-30865461)
chr6 (117-162)||(33068655-33068700)
chr6 (111-143)||(769089-769121)
chr6 (109-141)||(4029582-4029614)
chr6 (114-154)||(4420556-4420596)
chr6 (114-142)||(5328925-5328953)
chr6 (116-148)||(7354149-7354181)
chr6 (99-163)||(8470064-8470128)
chr6 (98-142)||(10728583-10728627)
chr6 (118-162)||(12631543-12631587)
chr6 (99-163)||(22742296-22742360)
chr6 (111-163)||(24332873-24332924)
chr6 (104-136)||(28621191-28621223)
chr6 (111-143)||(30537034-30537066)
chr6 (104-148)||(31624203-31624247)
chr6 (104-164)||(34405034-34405094)
[»] chr3 (60 HSPs)
chr3 (97-164)||(44374718-44374785)
chr3 (104-154)||(2128332-2128382)
chr3 (114-164)||(41028942-41028992)
chr3 (99-148)||(15304423-15304472)
chr3 (109-160)||(1395604-1395655)
chr3 (99-142)||(10101552-10101595)
chr3 (99-142)||(10212477-10212520)
chr3 (114-161)||(20192697-20192744)
chr3 (114-164)||(905061-905111)
chr3 (104-162)||(35127452-35127510)
chr3 (114-156)||(35394792-35394834)
chr3 (104-149)||(30956707-30956752)
chr3 (104-149)||(30972519-30972564)
chr3 (99-148)||(42809246-42809295)
chr3 (116-164)||(16790181-16790229)
chr3 (116-164)||(16790449-16790497)
chr3 (117-165)||(20173982-20174030)
chr3 (104-164)||(36189495-36189555)
chr3 (104-140)||(42808932-42808968)
chr3 (117-164)||(27792801-27792848)
chr3 (121-164)||(28283675-28283718)
chr3 (109-156)||(39602295-39602342)
chr3 (114-161)||(42039091-42039138)
chr3 (109-163)||(22214767-22214821)
chr3 (114-164)||(23793518-23793567)
chr3 (104-142)||(32095272-32095310)
chr3 (114-164)||(34958257-34958307)
chr3 (112-154)||(36445671-36445713)
chr3 (114-164)||(38462210-38462260)
chr3 (114-148)||(49587007-49587041)
chr3 (114-160)||(52450143-52450189)
chr3 (110-143)||(6233301-6233334)
chr3 (109-142)||(10357384-10357417)
chr3 (114-155)||(25258709-25258750)
chr3 (109-142)||(26990685-26990718)
chr3 (118-163)||(27294286-27294331)
chr3 (116-164)||(31526316-31526362)
chr3 (109-142)||(33882979-33883012)
chr3 (115-164)||(39971248-39971297)
chr3 (114-155)||(40122843-40122884)
chr3 (114-163)||(41159039-41159088)
chr3 (99-156)||(43079679-43079736)
chr3 (111-156)||(49465751-49465796)
chr3 (118-162)||(2304336-2304380)
chr3 (119-163)||(22667355-22667399)
chr3 (119-163)||(22723994-22724038)
chr3 (104-164)||(25185922-25185981)
chr3 (116-164)||(25964371-25964419)
chr3 (111-162)||(30574002-30574051)
chr3 (111-163)||(31364831-31364883)
chr3 (112-148)||(33883838-33883874)
chr3 (118-162)||(36770098-36770142)
chr3 (99-143)||(36783410-36783454)
chr3 (104-148)||(44061104-44061148)
chr3 (99-143)||(45433015-45433059)
chr3 (104-148)||(46778308-46778352)
chr3 (116-164)||(48528507-48528555)
chr3 (121-161)||(48597687-48597727)
chr3 (116-160)||(52413214-52413258)
chr3 (114-142)||(54775079-54775107)
[»] chr5 (75 HSPs)
chr5 (114-164)||(6733983-6734033)
chr5 (114-160)||(7096218-7096264)
chr5 (114-164)||(20982226-20982276)
chr5 (114-164)||(37063165-37063215)
chr5 (104-148)||(7853603-7853647)
chr5 (116-160)||(13224362-13224406)
chr5 (116-164)||(26516227-26516275)
chr5 (117-165)||(29588808-29588856)
chr5 (104-164)||(35095864-35095924)
chr5 (109-156)||(6593237-6593284)
chr5 (99-162)||(9202824-9202887)
chr5 (104-143)||(10363700-10363739)
chr5 (109-164)||(39128568-39128623)
chr5 (104-162)||(11835208-11835266)
chr5 (104-162)||(14932221-14932279)
chr5 (114-164)||(35135753-35135803)
chr5 (114-164)||(35960343-35960393)
chr5 (112-162)||(40048369-40048419)
chr5 (119-164)||(3951890-3951935)
chr5 (104-161)||(5377281-5377338)
chr5 (99-140)||(12595816-12595857)
chr5 (110-163)||(27106010-27106063)
chr5 (104-148)||(465899-465943)
chr5 (114-154)||(12407752-12407792)
chr5 (116-164)||(16863710-16863758)
chr5 (104-164)||(40097484-40097544)
chr5 (107-162)||(1465103-1465158)
chr5 (104-143)||(10303751-10303790)
chr5 (117-164)||(10391282-10391329)
chr5 (109-164)||(19460051-19460106)
chr5 (103-162)||(33459015-33459074)
chr5 (114-161)||(34690806-34690853)
chr5 (104-151)||(42500306-42500353)
chr5 (109-163)||(706393-706447)
chr5 (114-164)||(1019535-1019585)
chr5 (112-162)||(4014513-4014563)
chr5 (109-139)||(4948620-4948650)
chr5 (104-162)||(5963363-5963421)
chr5 (114-156)||(10280667-10280709)
chr5 (114-156)||(11054123-11054165)
chr5 (114-164)||(11095560-11095610)
chr5 (102-148)||(11615453-11615499)
chr5 (118-168)||(16945076-16945126)
chr5 (114-164)||(19177408-19177458)
chr5 (103-161)||(21782649-21782707)
chr5 (114-164)||(28586857-28586907)
chr5 (114-160)||(29115304-29115350)
chr5 (114-164)||(31694447-31694497)
chr5 (114-164)||(36646169-36646219)
chr5 (116-162)||(39919739-39919785)
chr5 (104-142)||(42583100-42583138)
chr5 (109-162)||(4855629-4855682)
chr5 (117-154)||(12460094-12460131)
chr5 (114-143)||(14295456-14295485)
chr5 (114-143)||(29590831-29590860)
chr5 (99-156)||(32172590-32172647)
chr5 (114-159)||(34975312-34975357)
chr5 (119-155)||(1773521-1773557)
chr5 (110-142)||(1943202-1943234)
chr5 (116-148)||(5563649-5563681)
chr5 (104-148)||(7674593-7674637)
chr5 (110-154)||(8481157-8481201)
chr5 (114-154)||(11667102-11667142)
chr5 (104-156)||(12425508-12425560)
chr5 (116-160)||(12595544-12595588)
chr5 (114-142)||(29117021-29117049)
chr5 (104-136)||(30585510-30585542)
chr5 (121-161)||(31208405-31208445)
chr5 (104-156)||(37112339-37112391)
chr5 (119-163)||(37618935-37618979)
chr5 (116-156)||(37929858-37929898)
chr5 (110-142)||(38766930-38766962)
chr5 (120-164)||(38819672-38819716)
chr5 (111-162)||(41981796-41981848)
chr5 (114-162)||(42569071-42569119)
[»] chr1 (69 HSPs)
chr1 (109-162)||(4549797-4549850)
chr1 (112-156)||(2194447-2194491)
chr1 (104-164)||(46499935-46499995)
chr1 (121-164)||(13037793-13037836)
chr1 (104-163)||(47002955-47003014)
chr1 (109-164)||(49557070-49557125)
chr1 (114-164)||(870974-871024)
chr1 (111-157)||(7028228-7028274)
chr1 (114-160)||(30259578-30259624)
chr1 (104-162)||(34619459-34619517)
chr1 (116-166)||(43029494-43029544)
chr1 (110-164)||(52286607-52286661)
chr1 (119-164)||(6659632-6659677)
chr1 (99-164)||(48748659-48748723)
chr1 (114-155)||(50319230-50319271)
chr1 (111-155)||(172665-172709)
chr1 (116-164)||(23895265-23895313)
chr1 (115-163)||(42397693-42397741)
chr1 (114-162)||(45999379-45999427)
chr1 (109-160)||(1232978-1233029)
chr1 (109-156)||(3887718-3887765)
chr1 (112-143)||(4700155-4700186)
chr1 (113-160)||(4768914-4768961)
chr1 (99-142)||(14737781-14737824)
chr1 (104-143)||(15687154-15687193)
chr1 (111-162)||(29793713-29793764)
chr1 (109-148)||(38578472-38578511)
chr1 (114-161)||(38651500-38651547)
chr1 (110-156)||(6976885-6976931)
chr1 (109-143)||(9572194-9572228)
chr1 (99-149)||(14630044-14630094)
chr1 (113-155)||(15581054-15581096)
chr1 (114-164)||(16982027-16982077)
chr1 (114-164)||(18434569-18434619)
chr1 (110-140)||(30815722-30815752)
chr1 (109-143)||(31517826-31517860)
chr1 (110-164)||(33339507-33339561)
chr1 (114-160)||(34380378-34380424)
chr1 (109-143)||(36070200-36070234)
chr1 (104-154)||(36151586-36151636)
chr1 (116-158)||(37591367-37591409)
chr1 (104-162)||(37841929-37841987)
chr1 (114-164)||(41638401-41638451)
chr1 (109-143)||(44251368-44251402)
chr1 (116-162)||(45769836-45769882)
chr1 (109-143)||(46252768-46252802)
chr1 (104-142)||(49517021-49517059)
chr1 (116-157)||(172277-172318)
chr1 (112-157)||(2462903-2462948)
chr1 (109-154)||(4256128-4256173)
chr1 (114-163)||(7120080-7120129)
chr1 (109-142)||(11211069-11211102)
chr1 (99-164)||(17269179-17269244)
chr1 (114-143)||(17631192-17631221)
chr1 (104-149)||(24915132-24915177)
chr1 (111-140)||(29128386-29128415)
chr1 (109-142)||(36641826-36641859)
chr1 (104-165)||(40357967-40358028)
chr1 (114-147)||(42351997-42352030)
chr1 (99-164)||(44032075-44032140)
chr1 (116-164)||(3223618-3223666)
chr1 (111-143)||(10280599-10280631)
chr1 (114-142)||(15360845-15360873)
chr1 (114-162)||(17420134-17420182)
chr1 (109-161)||(26184683-26184735)
chr1 (99-151)||(26293182-26293234)
chr1 (118-162)||(33527242-33527286)
chr1 (108-164)||(36602719-36602775)
chr1 (124-164)||(45975869-45975909)
[»] scaffold0024 (1 HSPs)
scaffold0024 (99-161)||(27508-27570)
[»] scaffold0654 (1 HSPs)
scaffold0654 (99-164)||(6713-6778)
[»] scaffold0549 (2 HSPs)
scaffold0549 (111-164)||(1812-1865)
scaffold0549 (111-164)||(3902-3955)
[»] scaffold0014 (1 HSPs)
scaffold0014 (99-164)||(116632-116697)
[»] scaffold0020 (1 HSPs)
scaffold0020 (114-158)||(160063-160107)
[»] scaffold0053 (2 HSPs)
scaffold0053 (114-161)||(20111-20158)
scaffold0053 (104-160)||(5619-5675)
[»] scaffold0110 (1 HSPs)
scaffold0110 (99-164)||(4299-4365)
[»] scaffold0100 (1 HSPs)
scaffold0100 (118-164)||(42546-42592)
[»] scaffold0060 (1 HSPs)
scaffold0060 (115-164)||(63377-63426)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 15328625 - 15328496
Alignment:
Q  74 acatagtatggattcgaaaagaatgtatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatatatgaagaaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15328625 acatagtatggattcgaaaagaatgtatgtaaacgatttaactttattttatcttttattatagaaatagattatgcataagcacttatatatgaagaaa 15328526  T
Q  174 tagtccttacgtactggtttaatatctata 203  Q
    ||||||||||||||||||||||||||||||    
T  15328525 tagtccttacgtactggtttaatatctata 15328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15328675 - 15328620
Alignment:
Q  1 gactgaaaccaaa-ccttaaaacgctagcatgcatatgttattgttcactacatag 55  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  15328675 gactgaaaccaaaaccttaaaacgctagcatgcatatgttattgctcactacatag 15328620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 15328486 - 15328442
Alignment:
Q  245 tagactatacatgcagaagttttggaattttatgcacatctttat 289  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  15328486 tagactatacgtgcagaagttttggaattttatgcacatctttat 15328442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 24973938 - 24973873
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| | |||||||||||||||||||||||||||| || | |||||||||||||||    
T  24973938 tatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatat 24973873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 24975882 - 24975833
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  24975882 ctttattttatcttttgttatagaagtagattatacatcagcacttatat 24975833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 33894599 - 33894555
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  33894599 ttattttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 43152983 - 43153027
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  43152983 aaacaatttaactttattttatcttttgttatagaaatagcttat 43153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 5373204 - 5373157
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  5373204 actttattttatcttttgttatagaaatagcatatacataagcactta 5373157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 7244681 - 7244631
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| |||||||||||| ||||||||||| |||| |||||||||||||||    
T  7244681 actttcttttatcttttgatatagaaatagcttatacataagcacttatat 7244631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 30496693 - 30496635
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| |||||||||||| ||||||||||||||||| |||| ||||| |||||||    
T  30496693 aaacaatttgactttattttatattttgttatagaaatagtttatacataaacacttat 30496635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 46213782 - 46213732
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||| ||||||||||||||||| || | |||||||||||||||    
T  46213782 actttattttatattttgttatagaaatagcttttacataagcacttatat 46213732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 3610836 - 3610881
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||    
T  3610836 attttatcttttgttgtagaaatagcttatacataagcacttatat 3610881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 5276213 - 5276156
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||| ||| ||||||| ||||||||||||||| |||||| |||| ||||||||||||    
T  5276213 aaacggtttgactttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 22388001 - 22388042
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcactta 22388042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 35536101 - 35536044
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||| |||| |||||||    
T  35536101 tatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 2013173 - 2013129
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||    
T  2013173 attttatcttttgttatagaaataaattatacataagcatttata 2013129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 148
Target Start/End: Original strand, 2767271 - 2767303
Alignment:
Q  116 tttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||||||||    
T  2767271 tttattttatcttttgttatagaaatagattat 2767303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 4591518 - 4591470
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||||||||||||||| |||| |||| ||||| ||||||||||    
T  4591518 ttattttatcttttgttatagagatagcttatacataaacacttatata 4591470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 12835013 - 12835073
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    |||| |||| |||| |||||||||||||||||||| |||||||||  | ||||||||||||    
T  12835013 tatgaaaacaatttgactttattttatcttttgttgtagaaatagcatctgcataagcact 12835073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 42656500 - 42656460
Alignment:
Q  108 gatttaactttattttatcttttgttatagaaatagattat 148  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  42656500 gatttgactttattttatcttttgttatagaaatagcttat 42656460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 46091590 - 46091530
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    |||| |||| |||| | |||||||||||||| ||||||| ||||| |||||||||||||||    
T  46091590 tatgaaaacaattttattttattttatctttcgttataggaatagcttatgcataagcact 46091530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 47007025 - 47006977
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| ||||||||||||||||| || |||| |||||||||||||||    
T  47007025 tttatttgatcttttgttatagaaaaagtttatacataagcacttatat 47006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 1417258 - 1417203
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| |||| |||| ||||||||||||||||||||||| |||||| |||| |||||    
T  1417258 tatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 2223137 - 2223078
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||| |||||  ||||||||||||||||||||||| |||| ||||| ||||||||    
T  2223137 aaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacacttata 2223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 2999180 - 2999141
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatag 143  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  2999180 aaacggtttgactttattttatcttttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 21853197 - 21853256
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||||||||||||||||||||||| |||||||||  ||||  |||| ||||||||    
T  21853197 aaacaatttaactttattttatcttttgtaatagaaataacttatatataatcacttata 21853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 31341173 - 31341130
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagca 157  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||    
T  31341173 actttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 39591543 - 39591586
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||| |||| |||||||||||||||||||||||||||||    
T  39591543 tatgaaaacaatttgactttattttatcttttgttatagaaata 39591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 49060524 - 49060469
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||| ||||||||||||||||| |||| |||||  ||||||||    
T  49060524 atttgactttattttattttttgttatagaaatagcttatacataaatacttatat 49060469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 3802215 - 3802278
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| ||||||||| ||||||||||| ||||| |||||||||||| ||||  | ||||||||||||    
T  3802215 tatgaaaacgatttgactttattttaccttttattatagaaatagcttat--acaagcacttatat 3802278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 148
Target Start/End: Complemental strand, 28178948 - 28178914
Alignment:
Q  114 actttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||||| ||||    
T  28178948 actttattttatcttttgttatagaaatagcttat 28178914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 28613615 - 28613665
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| |||||||||| ||||||||||||||||| |||||| |||| |||||    
T  28613615 aaacaatttaactttgttttatcttttgttataaaaatagcttatacataa 28613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 34083606 - 34083644
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  34083606 aaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Original strand, 35808999 - 35809041
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||||||||||||| |||| ||||| |||||    
T  35808999 tattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 37832228 - 37832278
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||| ||||| ||||||||||| |||| || ||||||||||    
T  37832228 taactttattttatattttgctatagaaatagtttatacacaagcacttat 37832278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 40689072 - 40689106
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||| |||||||||||    
T  40689072 atttaactttattttatcttttgctatagaaatag 40689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 45004750 - 45004708
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgca 151  Q
    ||||||||||||||||||||||| |||| |||||| |||||||    
T  45004750 atttaactttattttatcttttgctataaaaatagtttatgca 45004708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 45593810 - 45593860
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||| |||||||| |||||||| |||| |||||||| ||||||    
T  45593810 actttattttatgttttgttacagaaatagcttatacataagcatttatat 45593860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 2894797 - 2894748
Alignment:
Q  113 aactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||| ||||||||||||||||||||||| |||| ||| | |||||||    
T  2894797 aactttaatttatcttttgttatagaaatagcttatacatgaacacttat 2894748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 6824907 - 6824858
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcata 153  Q
    |||| |||||||||| || ||||||||||||||||||||| |||| ||||    
T  6824907 aaacaatttaactttgttctatcttttgttatagaaatagcttatacata 6824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 7513612 - 7513563
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||  || |||||| |||| |||||||||||||||    
T  7513612 ctttattttatcttttgtcttaaaaatagcttatacataagcacttatat 7513563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 8445264 - 8445215
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| |||||| ||||  | ||||||||||||    
T  8445264 ctttattttatcttttgttataaaaatagcttataaacaagcacttatat 8445215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 26935626 - 26935691
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||| |||||||||| ||||||||| |||||| |||  || ||||||||||||    
T  26935626 tatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatat 26935691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 27481391 - 27481436
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||| |||||||||||||||| |||| ||||| ||||||||||    
T  27481391 ttttatcctttgttatagaaatagcttatacataaacacttatata 27481436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 28165080 - 28165023
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| |||| |||| |||||||||||||||||||||| |  |||| ||||||||||||    
T  28165080 aaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 36537897 - 36537860
Alignment:
Q  128 tttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  36537897 tttgttatagacatagcttatgcataagcacttatata 36537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 44241842 - 44241789
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| ||||||||||||||  |||| ||||  |||||||||    
T  44241842 ttaactttattttatctgttgttatagaaataacttatacatacacacttatat 44241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 46223163 - 46223212
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||| ||||||||||||||| ||||||| |||| ||||| ||||||||    
T  46223163 actttaatttatcttttgttatggaaatagcttatacataaacacttata 46223212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 2727452 - 2727480
Alignment:
Q  115 ctttattttatcttttgttatagaaatag 143  Q
    |||||||||||||||||||||||||||||    
T  2727452 ctttattttatcttttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 4572577 - 4572537
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataa 154  Q
    ||||||||||||||||||||||||| |||| ||||| ||||    
T  4572577 actttattttatcttttgttatagatatagcttatgaataa 4572537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 27492772 - 27492724
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| | |||||||||||||||||| |||| |||||| ||||||||    
T  27492772 tttatttgaacttttgttatagaaatagtttatacataagaacttatat 27492724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 30134028 - 30133980
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||| || |||||| |||| ||||| |||||||    
T  30134028 actttattttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 30456526 - 30456570
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||| |||| |||||||||||||||||||| |||||||||    
T  30456526 tatgaaaacaatttgactttattttatcttttgttttagaaatag 30456570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 40009459 - 40009407
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| ||||||||||||||| |||||||||||| ||| || |||| |||||||    
T  40009459 aaacaatttaactttattttgtcttttgttataaaaacagcttatacataagc 40009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 43328232 - 43328184
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcac 158  Q
    |||||||| ||||||||||| ||||||||||||| | || |||||||||    
T  43328232 tttaacttaattttatctttggttatagaaatagctaatacataagcac 43328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 45813271 - 45813315
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcac 158  Q
    |||||||||||||||||| ||||||||||| ||||  ||||||||    
T  45813271 actttattttatcttttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 36114604 - 36114662
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  36114604 aaacaatttaactttattttatcttttgttatagaactaggttatgcataagcacttat 36114662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 165
Target Start/End: Original strand, 11344358 - 11344426
Alignment:
Q  97 tgtatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||| |||| |||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  11344358 tgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatata 11344426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 32837287 - 32837240
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  32837287 ttattttatcttttgttatagaaatagattatgcataagtgcttatat 32837240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 33267603 - 33267657
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||||||||    
T  33267603 tttaactttattttactgtttgttatagaaatagattatacataagcacttatat 33267657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 3673801 - 3673736
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||  | || |||||||||||||||    
T  3673801 tatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatat 3673736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 25609775 - 25609727
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  25609775 actttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 5133755 - 5133708
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  5133755 tttatctttattttatcttttgttatagaaatagcttatacataagca 5133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 11393738 - 11393793
Alignment:
Q  106 acgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||| ||||||||||||    
T  11393738 acgatttagctttattgtatcttttggtatagaaatagcttatacataagcactta 11393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 11410399 - 11410454
Alignment:
Q  106 acgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||| ||||||| ||||||||| ||||||||||| |||| ||||||||||||    
T  11410399 acgatttagctttattgtatcttttggtatagaaatagcttatacataagcactta 11410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 18962125 - 18962176
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||||||| |||||| | || ||||||||||||    
T  18962125 tttaactttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 31461422 - 31461367
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  31461422 atttgactttattttatcttttgttatagaaatagcttatatataaccacttatat 31461367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 34054993 - 34055040
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||||    
T  34054993 ctttattttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 3611215 - 3611157
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||| |||||| ||||||||||  |||| |||||||||||||    
T  3611215 aaacaatttaactttattttaccttttgctatagaaataacttatacataagcacttat 3611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 10150749 - 10150683
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||| |||| ||||||| |||||||||||||| |||||||||||  |||| ||||| ||||||||||    
T  10150749 tatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataaacacttatata 10150683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 13864629 - 13864579
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||| |||||||||||||||||| |||| ||||| |||||||||    
T  13864629 actttattttaccttttgttatagaaatagcttatacataaacacttatat 13864579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 17952792 - 17952842
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  17952792 actttattttatcttttgttatagaaatagcttatatataagctcttatat 17952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 33197330 - 33197380
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||| ||||||||||||||||||||| ||||  ||||||||||||||    
T  33197330 actttattctatcttttgttatagaaatagcttatagataagcacttatat 33197380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 35329910 - 35329960
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||| |||||| ||||||| |||||||||| |||||||||    
T  35329910 actttattttatcttatgttatggaaatagtttatgcataaacacttatat 35329960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 39567892 - 39567854
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  39567892 aaacaatttaactttattttatcttttgttatagaaata 39567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 42457937 - 42457887
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| ||||||||||||||||||||||  |||||||||||||||| |||||    
T  42457937 aaacaatttaactttattttatcttttactatagaaatagattatacataa 42457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 44600535 - 44600470
Alignment:
Q  99 tatgtaaacgatttaactttattttatctttt--gttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| ||||||||||||||||||||||  | ||||||||||| |||| |||||||||||||    
T  44600535 tatgaaaactatttaactttattttatctttttggctatagaaatagcttatacataagcacttat 44600470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 4026801 - 4026748
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||||||||| |||| |||||| ||||  ||||||||||||    
T  4026801 atttaactttattttatcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 12215786 - 12215741
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  12215786 actttattttatcttttgttgtagaaatagtttatacataagcact 12215741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 12785860 - 12785815
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||| |||||||||||||||||||||| || |||||||||||||    
T  12785860 ttatttaatcttttgttatagaaatagatcatacataagcacttat 12785815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 14845081 - 14845122
Alignment:
Q  124 atcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  14845081 atcttttgttatagaaatagattaaccataagcacttatata 14845122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 26522717 - 26522762
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||    
T  26522717 tttattatatcttttgttatagaaatagtttatacataagcactta 26522762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 41033047 - 41033088
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataagcactta 41033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 10143151 - 10143103
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||||||||||||||||  |||| |||||||||||||    
T  10143151 acttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 10190256 - 10190208
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||||||    
T  10190256 tttattttatcctttgttataaaaatagtttatacataagcacttatat 10190208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 5045248 - 5045295
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||| |||||| |||| ||||| ||||||    
T  5045248 actttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 5903280 - 5903229
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||||| ||||||||||||||||   |||||||||| |||||||||    
T  5903280 actttattttatattttgttatagaaataacgtatgcataagaacttatata 5903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 8820354 - 8820405
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||| |||| ||||||||||||||||||| |||||| |||| ||||||    
T  8820354 aaacgattgaactatattttatcttttgttatataaatagcttatacataag 8820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 9833132 - 9833093
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  9833132 tttattttatcttttgttatggaaatagattatacataag 9833093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 10769720 - 10769669
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||| ||| ||||||||||||||||||  ||| ||||||||||||||||    
T  10769720 actttatgttaccttttgttatagaaatagcctattcataagcacttatata 10769669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 30990459 - 30990506
Alignment:
Q  113 aactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||| ||||||||||||| || |||| |||||||||||    
T  30990459 aactttattttatcatttgttatagaaagagcttatacataagcactt 30990506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 32098399 - 32098442
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||||||||||||||||||||||||||||| ||||  |||||||    
T  32098399 actttattttatcttttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 37474735 - 37474688
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||| ||||||||| ||||||| |||||||||| ||||||    
T  37474735 actttattttattttttgttatcgaaatagtttatgcataaacactta 37474688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 38239642 - 38239689
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| ||||||||||||||||||||||||| |||| ||||| ||||||    
T  38239642 acttgattttatcttttgttatagaaatagcttatacataaacactta 38239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 5998789 - 5998827
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattat 148  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  5998789 tttaactttattttatcttttgttataaaaatagcttat 5998827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 7936999 - 7936957
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||| | |||| |||||||||||||    
T  7936999 ttttatcttttgttatagaaatggtttatacataagcacttat 7936957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 20933739 - 20933697
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgca 151  Q
    ||||||| ||||||||||||||||| || ||||||||||||||    
T  20933739 atttaacattattttatcttttgttgtaaaaatagattatgca 20933697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 28803597 - 28803647
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||||||||||    
T  28803597 actttattttatcttttgttatcgaaataacttatatataagcacttatat 28803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 28933798 - 28933752
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||||||||||| |||||| |||| ||| ||||||||||||    
T  28933798 attttatcttttgttatataaatagcttatacatgagcacttatata 28933752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34339102 - 34339052
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||| | |||||||| || |||| |||||||||||||||    
T  34339102 actttattttatctttagctatagaaaaagtttatacataagcacttatat 34339052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 36114408 - 36114350
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||||||||| ||| |||||| | ||  ||||||||||||    
T  36114408 aaacaatttaactttattttatcttttgtcataaaaatagctaatatataagcacttat 36114350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 37053573 - 37053523
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||| || ||||||||||||||  ||| |||||||||||||||    
T  37053573 actttattttattttctgttatagaaatagtctatacataagcacttatat 37053523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 37518928 - 37518966
Alignment:
Q  127 ttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  37518928 ttttgttatagaaatagattaaccataagcacttatata 37518966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 44606180 - 44606230
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||||||||||||||  |||||| |||| ||||| ||||||||||    
T  44606180 ctttattttatcttttgttatgaaaatagcttatacataaacacttatata 44606230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 2416302 - 2416245
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| ||||||||| ||||||||||||| || |||||||  |||| ||||||||||||    
T  2416302 aaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 3932334 - 3932301
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||||||||||| ||||||||||    
T  3932334 atttaactttattttatcttttgctatagaaata 3932301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 7825236 - 7825183
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||| |||||||||||||||| |||||| |||| || || |||||||    
T  7825236 atttaactttactttatcttttgttataaaaatagcttatacagaaacacttat 7825183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 14277985 - 14278034
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||| || ||| ||||||||||||| |||| ||||||||||||||    
T  14277985 actttatttaatgtttagttatagaaatagtttatacataagcacttata 14278034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 28902060 - 28902007
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||| ||||||||| ||| ||||||| |||||| |||| ||||||||||||||    
T  28902060 tttaattttattttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 37034023 - 37033982
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataag 155  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  37034023 actttattttatctttttttatagaaatagtttatacataag 37033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 40837504 - 40837553
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| |||| |||||| ||||||||||||||||||||||| ||||    
T  40837504 tatgaaaacaatttgactttaatttatcttttgttatagaaatagcttat 40837553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 41039739 - 41039784
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||| | |||||||| |||| ||||||||||||    
T  41039739 tttattttatcttttgtcacagaaatagcttatacataagcactta 41039784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 41407058 - 41407025
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||| ||||||||||||||    
T  41407058 tttaactttattttatcttgtgttatagaaatag 41407025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 41407290 - 41407245
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||| ||||||||||||||||||||||| || |||||||| |||||    
T  41407290 aaacaatttaactttattttatcttttggtacagaaatagcttatg 41407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 43163522 - 43163474
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| || ||||||||||||||||||||||| ||| |||||||||||    
T  43163522 ctttattatagcttttgttatagaaatagattatacat-agcacttatat 43163474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 43199398 - 43199365
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||||||||||||| ||||||||    
T  43199398 atttaactttattttatcttttgttgtagaaata 43199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 1939423 - 1939451
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  1939423 actttattttatcttttgttatagaaata 1939451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 9478276 - 9478228
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||  |||||||||||||| |||| ||||| |||||||||    
T  9478276 tttattttatctactgttatagaaatagcttatacataaacacttatat 9478228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11393459 - 11393507
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| ||||||||| ||||||||||| ||||  ||||||||||||||    
T  11393459 tttattatatcttttgatatagaaatagcttatagataagcacttatat 11393507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11410120 - 11410168
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| ||||||||| ||||||||||| ||||  ||||||||||||||    
T  11410120 tttattatatcttttgatatagaaatagcttatagataagcacttatat 11410168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 12970984 - 12970936
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||| |||| |||||||| ||| |||||||||||| |||||||||||||    
T  12970984 atttgacttaattttatcattttttatagaaatagcttatgcataagca 12970936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 32821786 - 32821746
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||||||||||||| |||||| |||| |||||||    
T  32821786 tttattttatcttttgttataaaaatagcttattcataagc 32821746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 35459899 - 35459839
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||||||||||||||||| |||| |||||| |||| || || |||||||||    
T  35459899 aaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatat 35459839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 40759012 - 40758968
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||||    
T  40759012 aaacaatttgactttattttatcttttgttatggaaatagcttat 40758968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 41809337 - 41809377
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagca 157  Q
    ||||||| ||||||||||||||||||| |||| ||||||||    
T  41809337 ttattttttcttttgttatagaaatagtttatacataagca 41809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 42907348 - 42907304
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||||||||||| |||| |||||||||||||| ||||    
T  42907348 aaacaatttaactttattttttcttctgttatagaaatagcttat 42907304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 43259823 - 43259779
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| ||||||||||||||| |||||||||||||| ||||    
T  43259823 aaactatttgactttattttatcttgtgttatagaaatagcttat 43259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 44443295 - 44443251
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||| ||| |||||| |||| |||||||||||||    
T  44443295 tattttatcttttgtaataaaaatagcttatacataagcacttat 44443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 14482191 - 14482131
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  14482191 aaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatat 14482131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 26215479 - 26215427
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  26215479 tttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 42597390 - 42597331
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||| |||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  42597390 aaacaattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 7026725 - 7026660
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||||||||||||||||||||||  | ||| ||||||||||||||||||||    
T  7026725 tatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatat 7026660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 1112842 - 1112786
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||| ||||||| |||||||||||||||||||||||||||  ||| |||||||||||    
T  1112842 aaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcactt 1112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 4558782 - 4558730
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||| ||||||    
T  4558782 atttaactttattttatcttttattatagaaatagcttatacataaacactta 4558730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 10727174 - 10727126
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  10727174 tttatttcatcttttgctatagaaatagcttatgcataagcacttatat 10727126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 11569551 - 11569599
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  11569551 ctttattttatcttttgttataaaaatagactatgcatcagcacttata 11569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 32976406 - 32976367
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32976406 aaactatttaactttattttatcttttgttatagaaatag 32976367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 39866828 - 39866879
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||||||||||||||||| |||| || |||||||||| |||||||    
T  39866828 actttattttatcttttgttatagagatagcttgtgcataagcatttatata 39866879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 3936833 - 3936787
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataag 155  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  3936833 atttagctttattttatcctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 7646195 - 7646137
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||| ||||| |||||||||||| |||| ||||| |||||||    
T  7646195 aaacaatttaactttattttaccttttcttatagaaatagcttatacataaccacttat 7646137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 35453710 - 35453764
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||| |||||| |||||||  ||||| ||||||||    
T  35453710 tttaactttattttatcttttgttgtagaaacagattatatataagtacttatat 35453764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 37152971 - 37153029
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||| ||||||| |||||    
T  37152971 aaacaatttaactttattttatactttgttatagaaatatattatacataagcgcttat 37153029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 37444496 - 37444554
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||||| |||||    
T  37444496 aaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttat 37444554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 39392752 - 39392802
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| |||| ||||  |||||||||    
T  39392752 actttattttatcttttgttatagaaatagtttatacatagccacttatat 39392802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 40728509 - 40728559
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||  |||||||| | |||||||||    
T  40728509 actttattttatcttttgttatagaaataacttatgcatgaacacttatat 40728559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 10114466 - 10114421
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||| ||||||||||| |||| |||||||||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataagcacttat 10114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 35298570 - 35298619
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  35298570 ctttattttatcttttgttactgaaatagcttatacataagcacttatat 35298619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 11188248 - 11188296
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||| |  |||| |||||||||||||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcacttatat 11188296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 26370967 - 26370915
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatatat 166  Q
    |||||||||||||||||||| || |||||| || |||||||| ||||||||||    
T  26370967 actttattttatcttttgttgtaaaaatagcttgtgcataagtacttatatat 26370915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 14280477 - 14280540
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| |||||| || ||||||||||||| ||||||||||| |||| ||||||| |||||    
T  14280477 tatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataagcgcttat 14280540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 143
Target Start/End: Original strand, 9956902 - 9956932
Alignment:
Q  113 aactttattttatcttttgttatagaaatag 143  Q
    |||||||||||||||||||||||||||||||    
T  9956902 aactttattttatcttttgttatagaaatag 9956932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 12972839 - 12972785
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| ||||||| ||||| |||||| ||||||| |||| |||||||||||||||    
T  12972839 tttaattttatttcatcttctgttattgaaatagcttatacataagcacttatat 12972785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 29699233 - 29699183
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||  || | |||||||| ||||||    
T  29699233 actttattttatcttttgttatagaaataacttgtacataagcatttatat 29699183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 35534952 - 35535002
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||| ||||| |||||||||||| ||||  ||||||||||||||    
T  35534952 actttattttaacttttattatagaaatagcttatatataagcacttatat 35535002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 37353330 - 37353387
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||| |||||||||||||||||||| || | ||||||| |||||    
T  37353330 aaacaatttaactttattt-atcttttgttatagaaatagtttgtacataagcgcttat 37353387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 40356850 - 40356800
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| ||||| |||||| ||||  ||||||||||||||    
T  40356850 actttattttatcttttattatataaatagcttatagataagcacttatat 40356800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 8536152 - 8536189
Alignment:
Q  127 ttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  8536152 ttttgttatagaaatagcttatacataagcacttatat 8536189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 14929211 - 14929256
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||| |||||| |||||||||||| |||||| ||||||||||||    
T  14929211 tattttgtcttttattatagaaatagcttatgcgtaagcacttata 14929256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 21653065 - 21653012
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||||||| | ||||||  ||| ||||||| |||||    
T  21653065 atttaactttattttatcttttgttacataaatagcctatacataagcgcttat 21653012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 26813897 - 26813946
Alignment:
Q  116 tttattttatctttt-gttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||| ||||||||||||  |||| |||||||||||||||    
T  26813897 tttattttatctttttgttatagaaataatttatacataagcacttatat 26813946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 31915343 - 31915400
Alignment:
Q  97 tgtatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||||| |||| |||| |||||||| |||||||||||||||| |||| |||| |||||    
T  31915343 tgtatgaaaacaatttgactttattctatcttttgttatagatatagcttatacataa 31915400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 34770881 - 34770824
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| |||| ||||||||||||||||||| || ||||||| || | ||||||||||||    
T  34770881 aaacaatttgactttattttatcttttgtaatggaaatagtttttacataagcactta 34770824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 40280281 - 40280346
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||||||||||||||||||| ||||||||  ||||  ||| ||||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatat 40280346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 42237498 - 42237535
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttata 136  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  42237498 tatgaaaacaatttaactttattttatcttttgttata 42237535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 43812454 - 43812499
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||| | ||| ||||| |||||||||    
T  43812454 attttatcttttgttatagaaataaactatacataaacacttatat 43812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 142
Target Start/End: Original strand, 43908763 - 43908792
Alignment:
Q  113 aactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||||||||||||||||||    
T  43908763 aactttattttatcttttgttatagaaata 43908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 926466 - 926418
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||| |||||||||||||| |||| |||| || |||||    
T  926466 actttattttatcttgtgttatagaaatagcttattcatatgcgcttat 926418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 8799384 - 8799356
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  8799384 actttattttatcttttgttatagaaata 8799356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 11000642 - 11000686
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||||    
T  11000642 aaacaatttgactttattttatcttttgttatggaaatagcttat 11000686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 11119090 - 11119118
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  11119090 actttattttatcttttgttatagaaata 11119118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 12976197 - 12976157
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatg 149  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  12976197 atttaactttattttatattttgctatagaaatagcttatg 12976157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 26820178 - 26820150
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  26820178 actttattttatcttttgttatagaaata 26820150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 34522147 - 34522195
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||| ||| |||||||||| |||| ||||||| |||||    
T  34522147 actttattttatcttgtgtcatagaaatagcttattcataagcgcttat 34522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 35374449 - 35374493
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||| ||||||||||||||||||||| | |||||||||||    
T  35374449 tatgaaaacaatttaactttattttatctttcgctatagaaatag 35374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 4471155 - 4471099
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  4471155 atttacctttattttatcttttgttataaaaatagtttatgcataagcacttatata 4471099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 23503543 - 23503490
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  23503543 atttaactttattttatattttgttatagaattagattatacataagcacttat 23503490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 30024694 - 30024629
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  30024694 tatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatat 30024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 18630659 - 18630609
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||||||    
T  18630659 actttattttatcttttgttattgaaatagtttatgcataagcgcttatat 18630609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 36734872 - 36734822
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  36734872 actttattttaccttttgttatagaaagagattatacataagcacttatat 36734822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 47970297 - 47970247
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  47970297 acttcattttatcttttgttatagaaatagcttatacataagcacttatat 47970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 17884057 - 17884000
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| ||||||||||||||||||||||||||||||||||| |||  ||| ||||||||    
T  17884057 aaacaatttaactttattttatcttttgttatagaaatagcttacacatgagcactta 17884000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 4191712 - 4191668
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatat 4191668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 30338679 - 30338727
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcac 158  Q
    |||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  30338679 tttaactttattctatcttttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 4798650 - 4798697
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  4798650 actttattttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 21593102 - 21593149
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||    
T  21593102 actttattttatctttagttatagaaatagtttatacataagcactta 21593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 21683566 - 21683617
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||| ||||||    
T  21683566 tttaactttatcttatcttttgttatagaaatagtttatacataaacactta 21683617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 51044550 - 51044597
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  51044550 actttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 155
Target Start/End: Complemental strand, 6364133 - 6364087
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||    
T  6364133 atttcactttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 28623272 - 28623218
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| |||||||||||||||||||| |||||  |||| |||||||||||||||    
T  28623272 tttaacattattttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 32724098 - 32724048
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||| ||||    
T  32724098 actttattttatcttttgtaatagaaatagattagacataagcactgatat 32724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 51555958 - 51556008
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||  ||||| |||| |||||||||||||||    
T  51555958 actttattttatcttttgttataataatagcttatacataagcacttatat 51556008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 54325128 - 54325178
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||||||||    
T  54325128 actttattttatcttttgtaatagaaatagtttatacacaagcacttatat 54325178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 3155592 - 3155543
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcata 153  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||| ||||    
T  3155592 aaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 41088374 - 41088313
Alignment:
Q  103 taaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| |||| |||||||||||||||||||| |  |||||| |||| |||||||||||||||    
T  41088374 taaacaattttactttattttatcttttgttgtgaaaatagtttatacataagcacttatat 41088313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 11389509 - 11389457
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||| |||||||||| |||||||||||  |||| |||||||||||||    
T  11389509 tttaactttactttatctttttttatagaaataatttatacataagcacttat 11389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 21952554 - 21952506
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||| |||||||||||||||||| |||||||||| |||||||    
T  21952554 acttgattttaccttttgttatagaaatagcttatgcataaacacttat 21952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 24160974 - 24160926
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    ||||||||| |||||||| |||||||||||||||| |||| ||||||||    
T  24160974 atttaacttgattttatcctttgttatagaaatagcttatacataagca 24160926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 40709475 - 40709523
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttatatat 166  Q
    ||||||||||||||||||||||| || ||||  ||||||||||||||||    
T  40709475 tattttatcttttgttatagaaacagcttataaataagcacttatatat 40709523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 41701517 - 41701561
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||    
T  41701517 tatgaaaacgatttgactttattttatcttttgttatataaatag 41701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 47800613 - 47800581
Alignment:
Q  110 tttaactttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||||||    
T  47800613 tttaactttattttatcttttgttatagaaata 47800581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 49619172 - 49619220
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  49619172 tttatttgatcttttgttatacaaatagcctatgcataagcacttatat 49619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 4071866 - 4071812
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  4071866 atttgactttattttatcttttgttatagaaatag-ttatatataaacacttatat 4071812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 25487636 - 25487679
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||    
T  25487636 actttattttattttttgttatagaaatagcttatacataagca 25487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 26520310 - 26520361
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||| |||||||||||||| ||||||||||||||||| || |||| ||||||    
T  26520310 aaacaatttaactttatttcatcttttgttatagaaacagtttatacataag 26520361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 32066502 - 32066549
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||| || ||| |||| ||||||||||||||    
T  32066502 tttattttatcttttgttataaaagtagtttatacataagcacttata 32066549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 42321955 - 42322018
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| |||| ||||||||||||| ||||||||| |||||| |||| ||||| |||||||    
T  42321955 tatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacacttat 42322018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 42641721 - 42641772
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||| ||||||||||||||||||| ||||||| |||| ||||| |||||||    
T  42641721 ttaacattattttatcttttgttatggaaatagcttatacataaacacttat 42641772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 5219587 - 5219641
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||| ||||||| ||||  ||| ||| |||||||||||    
T  5219587 tttaactttattttatcttttattatagagatagcatatacatgagcacttatat 5219641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 7601748 - 7601690
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||| |||| ||||| ||||| |||| ||||||| |||||    
T  7601748 aaacaatttaactttattttatcctttgctataggaatagcttatacataagcgcttat 7601690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 8422928 - 8422978
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| ||||| |||||| |||| ||||||||| |||||    
T  8422928 actttattttatctttttttataaaaatagcttatacataagcacatatat 8422978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 13216285 - 13216323
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  13216285 aaacgatttaactttattttatcttttgctataaaaata 13216323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 19422397 - 19422347
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  19422397 actttattatatcttttgttatagaaataacttatacataagcatttatat 19422347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 25548194 - 25548241
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||||||    
T  25548194 ttaactttattttacctt--gttatagaaatagcttatgcataagcactt 25548241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 44319928 - 44319879
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  44319928 actttattttatctttt-ttatagaaatagtttatacatgagcacttatat 44319879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 46176104 - 46176146
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||||  ||||| |||||||||||||    
T  46176104 tttatcttttgttatagaaataacttatgtataagcacttata 46176146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 52746921 - 52746962
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagatt 146  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  52746921 aaacaatttaactttattttatcttttgttat-gaaatagatt 52746962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 679238 - 679185
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||| |||||| ||||| | |||||||||| ||||||| |||||    
T  679238 atttaactttatttcatctttagttatggtaatagattatacataagcgcttat 679185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 2980575 - 2980612
Alignment:
Q  127 ttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  2980575 ttttgttatagaaatagcttatacataagcacttatat 2980612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 3662327 - 3662283
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||    
T  3662327 actttattttatcttttgttataggaatagtttat-cataagcact 3662283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 9680648 - 9680595
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||||||||| |||| ||||||| |||| |||||||| ||||    
T  9680648 atttgactttattttatcttttattatcgaaatagcttatacataagcatttat 9680595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 20907152 - 20907103
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||| ||||| |||||| |||| ||||| ||||||||    
T  20907152 actttattttatcttttcttatacaaatagcttatacataaacacttata 20907103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Original strand, 20936093 - 20936122
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  20936093 actttattttatcttttgttatagaaatag 20936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 22684592 - 22684657
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| ||||||||||| | |||||||||||||||| |||| || ||||| ||||||    
T  22684592 tatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatat 22684657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Complemental strand, 24929472 - 24929443
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  24929472 actttattttatcttttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 24936286 - 24936237
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatatat 166  Q
    ||||||||| ||||||||||||||||  |||| ||||| |||||||||||    
T  24936286 ttattttatattttgttatagaaataacttatacataaccacttatatat 24936237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 27406029 - 27405980
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||  ||||||||||| ||||| |||| |||||||||    
T  27406029 ctttattttatcttttactatagaaatagtttatgaataaacacttatat 27405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 32920481 - 32920539
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||| |||||||||||||  |||||||| |||||| |||| ||||| |||||||||    
T  32920481 aaacgatttgactttattttatc--ttgttataaaaatagcttatccataaacacttatat 32920539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 45128406 - 45128451
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||| |||| ||||||  |||||||    
T  45128406 attttatcttttgttatagaaatagtttatacataagttcttatat 45128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 52735106 - 52735061
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||||||    
T  52735106 atttgactttattttatcttttgttacagaaatagcttacgcataa 52735061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 56480338 - 56480293
Alignment:
Q  103 taaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| ||||    
T  56480338 taaacaatttaactttattttgtcttttgttatggaaatagcttat 56480293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 486058 - 486014
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||||| |||||||||  ||| |||||||||||    
T  486058 tttattttatcttttgttttagaaatagcatatacataagcactt 486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 1404411 - 1404347
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatatatga 168  Q
    |||| |||| || |||||||||||||| |||||||||||| ||||  | ||||| ||||||||||    
T  1404411 aaacaatttgaccttattttatcttttattatagaaatagcttataaaaaagcatttatatatga 1404347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 24160588 - 24160636
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| ||||||||||||||||||| || ||||  ||||||||||||||    
T  24160588 tttatattatcttttgttatagaaaaagcttatttataagcacttatat 24160636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 25885848 - 25885812
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaa 140  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  25885848 aaacaatttaactttattttatcttttgctatagaaa 25885812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 31851438 - 31851398
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||||||||||||||||| ||||||||| |||||| |||||    
T  31851438 atttaactttattttatcatttgttataaaaatagcttatg 31851398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 34368866 - 34368822
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| ||||| |||||||||||||||||||||||| ||||    
T  34368866 aaacaatttgactttgttttatcttttgttatagaaatagcttat 34368822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 36048778 - 36048731
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  36048778 actttaatttatcttttgttatagaaatagcttat-aataagcacttat 36048731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 39438622 - 39438674
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| ||||||||||||||| |||||||||||||| |||  ||| ||||||||    
T  39438622 atttgactttattttatcttatgttatagaaatagcttacacatgagcactta 39438674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 41603484 - 41603532
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||| |||| ||||||| |||||| |||| |||||||||||||||    
T  41603484 tttattttttcttatgttatataaatagcttatacataagcacttatat 41603532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 44138543 - 44138495
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||||||||||||||||||| || |||||||| || |||| ||||||||    
T  44138543 atttaactttattttatcttctgctatagaaacagcttatacataagca 44138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 46176241 - 46176277
Alignment:
Q  129 ttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  46176241 ttgttatagaaatagcttatgtataagcacttatata 46176277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 46796995 - 46796947
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||| ||||||||  |||||| ||||||||||| ||||||||    
T  46796995 tttattttatcgtttgttatgaaaatagcttatgcataagaacttatat 46796947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 1165 - 1215
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  1165 actttattttatcttttgttatagaaatagcttatacataagcacttatat 1215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 2810 - 2760
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  2810 actttattttatcttttgttatagaaatagcttatacataagcacttatat 2760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 1810393 - 1810441
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||    
T  1810393 tttattttatcttttgttatagaaatagcttttgcataagcacttatat 1810441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 264360 - 264302
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||||||||| | ||||||||| ||||  ||||||||||||    
T  264360 aaacgatttaactttattttatcttttgctttagaaatagcttatatataagcacttat 264302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 4006703 - 4006645
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  4006703 aaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 9093637 - 9093695
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| |||||    
T  9093637 aaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttat 9093695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 33911368 - 33911422
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||    
T  33911368 tttaactttatttgatcttttgttataaaaatagattatacataaacacttatat 33911422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 8349745 - 8349805
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||||| |||||||| |||| || || |||||||||    
T  8349745 aaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatat 8349805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 507201 - 507154
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||    
T  507201 taactttattttatcttttgttatagaaataatttatacataagcact 507154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 2514681 - 2514634
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  2514681 actttattttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 4248942 - 4248887
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||| ||||||| ||||  ||||||||||||||    
T  4248942 atttgactttattttatcttttgttattgaaatagcttatatataagcacttatat 4248887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 31461651 - 31461608
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttata 31461608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 29274305 - 29274363
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||| |||| ||||||||    
T  29274305 tatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 32861407 - 32861357
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||||  ||| |||||||||||||||    
T  32861407 acttaattttatcttttgttatagaaatagcgtatccataagcacttatat 32861357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 1402979 - 1402946
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||||||    
T  1402979 tttaactttattttatcttttgttatagaaatag 1402946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 4247731 - 4247772
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagcactta 4247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 11340713 - 11340766
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||||||| ||  ||||  ||||||||||||||    
T  11340713 ttaactttattttatcttttgttatagaattatcttatatataagcacttatat 11340766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 24836280 - 24836341
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||| |||| |||||||||||||||||||||||||||||  |||| |||||  |||||||||    
T  24836280 aaacaatttgactttattttatcttttgttatagaaataacttatacataaatacttatata 24836341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 31668781 - 31668826
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatat 31668826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 3169338 - 3169386
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| |||||||||||||||||||| |||  |||||||||||||||    
T  3169338 tttatttcatcttttgttatagaaataggttacacataagcacttatat 3169386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 3171522 - 3171570
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  3171522 acttaattttatcttttgttataaaaatagcttatgcataagcgcttat 3171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 9732465 - 9732405
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||||||| |||  ||||||||||| ||||||||||||||||||||    
T  9732465 aaacaatttgacttaattttatcctttaatatagaaatagcttatgcataagcacttatat 9732405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 10452453 - 10452501
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||| ||||||||||||||||| |||| |||||||||| ||||    
T  10452453 tttattttatattttgttatagaaatagcttatacataagcactgatat 10452501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 29269885 - 29269825
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||||||||||| |||||||||||||| |||| || ||||| ||||||    
T  29269885 aaacaatttgactttattttatcttctgttatagaaatagtttatacacaagcatttatat 29269825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 2735053 - 2735014
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  2735053 atttaactttattttatcttttgttatagacatagcttat 2735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 20671946 - 20672005
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||| |||||||||||||||||| | ||||||||| |||| ||||| ||||||||    
T  20671946 aaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttata 20672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 24774737 - 24774690
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  24774737 actttattttatattttgttatagaaatagtttatatataagcactta 24774690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 165
Target Start/End: Complemental strand, 29940775 - 29940724
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||||||||||||||||||| || |||| | ||||||||| ||||    
T  29940775 actttattttatcttttgttatagaaaaagcttatacttaagcacttgtata 29940724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 32917203 - 32917156
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||| ||| ||||||| |||| ||||||||||||||    
T  32917203 tttattttatcttttgctattgaaatagcttatacataagcacttata 32917156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 33259788 - 33259745
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||| |||||| |||| |||||||||||||||    
T  33259788 tttatcttttgttataaaaatagcttatacataagcacttatat 33259745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 3204633 - 3204683
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| |||||||| ||| |||| | |||||||||||||    
T  3204633 actttattttatcttttattatagaagtagtttattcgtaagcacttatat 3204683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 9559622 - 9559680
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||| |||||||||||||||| ||||||||||  |||| ||||||| |||||    
T  9559622 aaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgcttat 9559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 10016528 - 10016474
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| |||||||||||||||| | ||||||||| |||| |||||| ||||||||    
T  10016528 tttaaatttattttatcttttggtttagaaatagcttatacataaggacttatat 10016474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 13360714 - 13360664
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||| ||||||||||||||||| ||   |||||||||||||||    
T  13360714 actttattttatattttgttatagaaatagtttgcacataagcacttatat 13360664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 21959707 - 21959661
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||||||||| ||||||| |||| | |||||||||    
T  21959707 actttattttatcttttgttatggaaatagcttatacttaagcactt 21959661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 160
Target Start/End: Complemental strand, 33416360 - 33416318
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    ||||||||||||||||||| |||||| |||| |||||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataagcactt 33416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 781364 - 781315
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||| |||||||||||| |||| ||| || |||||||    
T  781364 actttattttatcttttattatagaaatagcttatacattagtacttata 781315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 7148640 - 7148595
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||||||||| ||| ||||||||| |||| ||||||||||||||||    
T  7148640 ttttatctttagttgtagaaatagcttatacataagcacttatata 7148595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 7714019 - 7713954
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| ||||||||||||||||||||||  || ||| |||| ||||||| |||||||    
T  7714019 tatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatat 7713954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Original strand, 10749314 - 10749347
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||| |||||||||||    
T  10749314 atttaactttattttatcttttattatagaaata 10749347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Complemental strand, 30865461 - 30865432
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  30865461 actttattttatcttttgttatagaaatag 30865432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 33068655 - 33068700
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataagcatttat 33068700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 769121 - 769089
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatag 143  Q
    |||||||||||||| ||||||||||||||||||    
T  769121 ttaactttattttagcttttgttatagaaatag 769089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 4029582 - 4029614
Alignment:
Q  109 atttaactttattttatcttttgttatagaaat 141  Q
    |||||||||||||||||||||||||||| ||||    
T  4029582 atttaactttattttatcttttgttataaaaat 4029614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 4420596 - 4420556
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||||||||||||||||||||||||| ||| |||| |||||    
T  4420596 actttattttatcttttgttatagaagtagcttatacataa 4420556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 5328953 - 5328925
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  5328953 actttattttatcttttgttatagaaata 5328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 148
Target Start/End: Complemental strand, 7354181 - 7354149
Alignment:
Q  116 tttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||| ||||    
T  7354181 tttattttatcttttgttatagaaatagtttat 7354149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 8470064 - 8470128
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| ||||| ||| |||||||||| || ||||||| |||||||| ||||  |||||||||||||    
T  8470064 tatgaaaacggtttgactttattttctcatttgttacagaaatagcttatttataagcacttata 8470128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 10728627 - 10728583
Alignment:
Q  98 gtatgtaaacgatttaactttattttatcttttgttatagaaata 142  Q
    ||||| |||| ||||||||||||||||||||||| | ||||||||    
T  10728627 gtatgaaaacaatttaactttattttatcttttgctttagaaata 10728583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 12631587 - 12631543
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||| ||||||||||||| |||| |||||| ||||||    
T  12631587 tattttatctttggttatagaaatagcttatacataagaacttat 12631543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 22742360 - 22742296
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||| |||| ||||||||||||| ||||||||| |||||| ||||  ||||| |||||||    
T  22742360 tatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttata 22742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 24332924 - 24332873
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||||||| ||| |||||||| |||| ||||| ||||||||    
T  24332924 ttaactttattttatctttt-ttaaagaaatagcttatacataatcacttata 24332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 28621191 - 28621223
Alignment:
Q  104 aaacgatttaactttattttatcttttgttata 136  Q
    |||| ||||||||||||||||||||||||||||    
T  28621191 aaacaatttaactttattttatcttttgttata 28621223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 30537034 - 30537066
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatag 143  Q
    |||| ||||||||||||||||||||||||||||    
T  30537034 ttaattttattttatcttttgttatagaaatag 30537066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 31624247 - 31624203
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||  ||||||||||||||||||||||||||| ||||    
T  31624247 aaacaatttaaacttattttatcttttgttatagaaatagcttat 31624203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 34405094 - 34405034
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||||||| ||||| |||||||||||| ||||  |||| |||||||||    
T  34405094 aaacaatttgactttattttaacttttattatagaaatagcttatagataaacacttatat 34405034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 44374718 - 44374785
Alignment:
Q  97 tgtatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| |||| |||| ||||||||||||||||||||| ||| |||| |||| |||||||||||||||    
T  44374718 tgtatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatat 44374785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 2128332 - 2128382
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  2128332 aaacaatttaactttattttatcttttgttatagaaatagcttatacataa 2128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 41028942 - 41028992
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  41028942 actttattttttcttttgttatagaaatagcttatacataagcacttatat 41028992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 15304423 - 15304472
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  15304423 tatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 1395655 - 1395604
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||| |||||||||||||||||||||||||||||| |||| |||| ||||||    
T  1395655 atttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 10101552 - 10101595
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  10101552 tatgaaaacaatttaactttattttatcttttgttatagaaata 10101595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 10212477 - 10212520
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  10212477 tatgaaaacaatttaactttattttatcttttgttatagaaata 10212520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 20192697 - 20192744
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  20192697 actttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 905061 - 905111
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| |||| | ||||| |||||||    
T  905061 actttattttatcttttgttatagaaatagcttatacttaagcgcttatat 905111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 35127452 - 35127510
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||| | |||||||||||||||||||||  ||| |||||||||||||    
T  35127452 aaacaatttaactttagtatatcttttgttatagaaatagcctatacataagcacttat 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 35394792 - 35394834
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  35394792 actttattttatcttttattatagaaatagattatacataagc 35394834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 30956707 - 30956752
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||    
T  30956707 aaacaatttaactttattttatcttttgctatagaaatagcttatg 30956752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 30972519 - 30972564
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||    
T  30972519 aaacaatttaactttattttatcttttgctatagaaatagcttatg 30972564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 42809295 - 42809246
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||| |||||||| |||||||||||||||||||||||||| ||||    
T  42809295 tatgaaaacaatttaactatattttatcttttgttatagaaatagcttat 42809246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 16790181 - 16790229
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||  ||||  ||||||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatat 16790229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 16790449 - 16790497
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||| |||||||| |||||| |||| |||||||||||||||    
T  16790449 tttattttatctgttgttataaaaatagcttatacataagcacttatat 16790497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 20173982 - 20174030
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||||||||||||||||||||  | || ||||||||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagcacttatata 20174030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 36189555 - 36189495
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||| | |||||||| |||| ||||  |||||||||    
T  36189555 aaacaatttaactttattttatcttttgtaagagaaatagcttatacatactcacttatat 36189495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 42808968 - 42808932
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaa 140  Q
    |||| ||||||||||||||||||||||||||||||||    
T  42808968 aaacaatttaactttattttatcttttgttatagaaa 42808932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 27792848 - 27792801
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| | ||||||| |||| |||||||||||||||    
T  27792848 ttattttatcttttgtttttgaaatagcttatacataagcacttatat 27792801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 28283675 - 28283718
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||    
T  28283675 tttatcttttgttatagaagtaacttatgcataagcacttatat 28283718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 39602295 - 39602342
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||||||||||| |||||||||  ||||||||||| ||||||||||||    
T  39602295 atttaactttatgttatctttttctatagaaatagcttatgcataagc 39602342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 42039138 - 42039091
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||| |||||||| |||||||| |||| ||||||||||||    
T  42039138 actttattttattttttgttacagaaatagcttatacataagcactta 42039091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 22214767 - 22214821
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| ||||||||||||| |||||||||||||||  |||| |||| |||||||||    
T  22214767 atttcactttattttatcctttgttatagaaataatttatacatacgcacttata 22214821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 23793567 - 23793518
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||| |||||| |||| |||||||| ||||||    
T  23793567 actttattttatcttttgttata-aaatagtttatacataagcaattatat 23793518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 32095272 - 32095310
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  32095272 aaacaatttaacttaattttatcttttgttatagaaata 32095310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34958307 - 34958257
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||| |||||||||||||| |||| ||||||  |||||||    
T  34958307 actttattttatcttgtgttatagaaatagtttattcataagtgcttatat 34958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Complemental strand, 36445713 - 36445671
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||||||||||| ||||||||||||||||||| |||| |||||    
T  36445713 taactttattttctcttttgttatagaaatagcttatacataa 36445671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 38462260 - 38462210
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||| ||||||||||| ||||  |||| |||||||||    
T  38462260 actttattttatcttttggtatagaaatagcttataaataaacacttatat 38462210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 148
Target Start/End: Original strand, 49587007 - 49587041
Alignment:
Q  114 actttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||||| ||||    
T  49587007 actttattttatcttttgttatagaaatagcttat 49587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 52450143 - 52450189
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    ||||||||| |||||||||||||||||| | ||||||||||| ||||    
T  52450143 actttatttcatcttttgttatagaaattgcttatgcataagtactt 52450189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 6233301 - 6233334
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||| ||||||||    
T  6233301 tttaactttattttatcttttgttaaagaaatag 6233334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 10357417 - 10357384
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    ||||||| ||||||||||||||||||||||||||    
T  10357417 atttaacattattttatcttttgttatagaaata 10357384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 25258750 - 25258709
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataag 155  Q
    ||||||||| ||||||| |||||||||||| |||||||||||    
T  25258750 actttatttgatcttttattatagaaatagcttatgcataag 25258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 26990718 - 26990685
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    |||| |||||||||||||||||||||||||||||    
T  26990718 atttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 27294331 - 27294286
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||||  |  |||||||||||||||||||    
T  27294331 tattttatcttttgttatagaagaaacttatgcataagcacttata 27294286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 31526362 - 31526316
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  31526362 tttattttatcttttgatatagaaatag--tatacataagcacttatat 31526316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 33883012 - 33882979
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    |||| |||||||||||||||||||||||||||||    
T  33883012 atttcactttattttatcttttgttatagaaata 33882979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 39971297 - 39971248
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| || ||  |||| |||||||||||||||    
T  39971297 ctttattttatcttttgttatataagtaacttatacataagcacttatat 39971248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 40122843 - 40122884
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||||||||||||||||| ||||||| |||| ||||||    
T  40122843 actttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 41159088 - 41159039
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||||| ||||||| ||||  |||| ||||||||||||||    
T  41159088 actttattttatctttagttataggaataacttatacataagcacttata 41159039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 43079736 - 43079679
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| ||||||||||||||  |||||| ||||||||||||||||| |||  |||||||    
T  43079736 tatgaaaacgatttaacttccttttattttttgttatagaaatagcttacacataagc 43079679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 49465751 - 49465796
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||||||||||||||||||||||||| |||||| |||  |||||||    
T  49465751 ttaactttattttatcttttgttataaaaatagcttacacataagc 49465796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 2304336 - 2304380
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||| |||||||||||| |||| ||||| |||||||    
T  2304336 tattttatcttttattatagaaatagcttatacataatcacttat 2304380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 22667399 - 22667355
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||    
T  22667399 attttatcttttgttatagaagtagcttaaacataagcacttata 22667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 22724038 - 22723994
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||    
T  22724038 attttatcttttgttatagaagtagcttaaacataagcacttata 22723994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 25185981 - 25185922
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||||| ||||||||||||| |||||  |||| |||||||||||||||    
T  25185981 aaaccatttgactttattt-atcttttgttatataaatatcttattcataagcacttatat 25185922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 25964419 - 25964371
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||| |||||| |||| || ||| ||||||||    
T  25964419 tttattttatcttttgttataaaaatagcttatacaaaagaacttatat 25964371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 30574002 - 30574051
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||  |||||||||||| |||| ||||||| |||||    
T  30574002 ttaactttattttatcttt--ttatagaaatagcttatacataagcgcttat 30574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 31364883 - 31364831
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||||| ||||||||||| |||||| ||||  || ||||||||||    
T  31364883 ttaactttattttaccttttgttataaaaatagcttatatattagcacttata 31364831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 33883838 - 33883874
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattat 148  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  33883838 taactttattttatcttatgttatagaaatagcttat 33883874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 36770098 - 36770142
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||| |||||||||||||| |||| |||| |||||||||||||    
T  36770098 tattttgtcttttgttatagacatagcttatccataagcacttat 36770142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 36783410 - 36783454
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||| |||| |||||||||||||||||| |||||||||||    
T  36783410 tatgaaaacaattttactttattttatcttttggtatagaaatag 36783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 44061104 - 44061148
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||| ||||||||||||||| ||||||||||| ||||    
T  44061104 aaacaatttaaccttattttatcttttgctatagaaatagcttat 44061148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 45433015 - 45433059
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||| ||||||||| |||||||||||| ||||||||||||    
T  45433015 tatgaaaacaatttaacttcattttatcttttcttatagaaatag 45433059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 46778308 - 46778352
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||||||||||||||| ||| ||||||||||| ||||    
T  46778308 aaacaatttaactttattttatctcttgctatagaaatagcttat 46778352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 48528555 - 48528507
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||| | ||||||||||||||| |||| |||||| ||||||||    
T  48528555 tttattttatttcttgttatagaaatagcttatacataagtacttatat 48528507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 48597687 - 48597727
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||| |||  ||||||||||||    
T  48597687 tttatcttttgttatagaaatagtttaaacataagcactta 48597727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 52413214 - 52413258
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||    
T  52413214 tttattctatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 54775107 - 54775079
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  54775107 actttattttatcttttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 6733983 - 6734033
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  6733983 actttattttatctttcgttataaaaatagattatgcataaacacttatat 6734033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 7096218 - 7096264
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||    
T  7096218 actttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 20982226 - 20982276
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  20982226 actttattttatcctttgttatagaaatagcttatacataagcacttatat 20982276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 37063165 - 37063215
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||    
T  37063165 actttattttatcttttgttatagaaatagtttatacataagcatttatat 37063215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 7853647 - 7853603
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  7853647 aaacaatttaactttattttatcttttgttatagaaatagtttat 7853603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 13224406 - 13224362
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 26516275 - 26516227
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatat 26516227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 29588856 - 29588808
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagcacttatata 29588808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 35095864 - 35095924
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||||||||||||||||||||||||||||| |||   ||||||||||||||    
T  35095864 aaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcacttatat 35095924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 6593284 - 6593237
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||    
T  6593284 atttaactttattttatcttttgttatagaaattgtttatacataagc 6593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 9202824 - 9202887
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||| ||||||||||||||||||||||| || |||||||| ||||  ||||||||||||    
T  9202824 tatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 10363739 - 10363700
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10363739 aaacaatttaactttattttatcttttgttatagaaatag 10363700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 39128623 - 39128568
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  39128623 atttgactttattttatcttttgttatagaattagcttatacataagcacatatat 39128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 11835266 - 11835208
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||||||||||||| |||| | |||| ||||| |||||||    
T  11835266 aaacaatttaactttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 14932279 - 14932221
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||| ||| | |||||||    
T  14932279 aaacaatttaactttattttatcttttgctataaaaatagattatacatgaacacttat 14932221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 35135753 - 35135803
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||||  |||| ||||| |||||||||    
T  35135753 actttattttatcttttgttatagaaatatcttatacataaacacttatat 35135803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 35960393 - 35960343
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||| |||||||||||| ||||||||||  ||||||||    
T  35960393 actttattttatcttttattatagaaatagtttatgcataaatacttatat 35960343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 40048369 - 40048419
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||||||||||||||| |  |||| |||||||||||||    
T  40048369 taactttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 3951890 - 3951935
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||    
T  3951890 attttatcttttgttatataaatagcttattcataagcacttatat 3951935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 5377281 - 5377338
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| |||| |||||| |||||||||||||||| |||||| |||||||||||| ||||    
T  5377281 aaacaatttcactttagtttatcttttgttatataaatagtttatgcataagctctta 5377338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 12595816 - 12595857
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaa 140  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  12595816 tatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 27106010 - 27106063
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||||||||||||||||||||||||   |||| | ||||||||||||    
T  27106010 tttaactttattttatcttttgttatagaaatgacttatacgtaagcacttata 27106063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 465943 - 465899
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||    
T  465943 aaacaatttaactttattttatcttttgtcatagaaatagcttat 465899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 12407752 - 12407792
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 16863758 - 16863710
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||||||    
T  16863758 tttatttaatcttttgttataaaaatagcttacgcataagcacttatat 16863710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 40097484 - 40097544
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||| ||||||||||| |||||||||||||  |||| |||| ||||||||||    
T  40097484 aaacaatttaactctattttatcttctgttatagaaataacttatacatacgcacttatat 40097544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 1465103 - 1465158
Alignment:
Q  107 cgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||| | || ||||||||||| |||| ||||||| |||||    
T  1465103 cgatttaactttattttatcctatgctatagaaatagcttatacataagcgcttat 1465158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Complemental strand, 10303790 - 10303751
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  10303790 aaacaatttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 10391329 - 10391282
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||| |||||| |||| | |||||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatat 10391282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 19460106 - 19460051
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||| || |||  |||  ||||||||||||||    
T  19460106 atttaactttattttatcttttgttataaaagtagtgtatagataagcacttatat 19460051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 33459015 - 33459074
Alignment:
Q  103 taaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||| ||| ||||||||||| ||||||||||||||||||  |||| |||||||| ||||    
T  33459015 taaacaattcaactttattttgtcttttgttatagaaataacttatacataagcatttat 33459074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 34690853 - 34690806
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||||||||||||||||||||||||||||  ||| |||||| |||||    
T  34690853 actttattttatcttttgttatagaaatagcgtatacataaggactta 34690806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 42500306 - 42500353
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgca 151  Q
    |||| ||||||||||||||||||||||| |||| |||||| |||||||    
T  42500306 aaacaatttaactttattttatcttttgatataaaaatagcttatgca 42500353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 706447 - 706393
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||| |||||||||||||  ||||||||||| |||| ||||||| ||||||    
T  706447 atttaactatattttatcttttactatagaaatagcttatacataagcgcttata 706393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 1019535 - 1019585
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| |||||||||||||||  |||||| ||||||||||||| ||||||    
T  1019535 actttagtttatcttttgttattaaaatagtttatgcataagcatttatat 1019585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 4014513 - 4014563
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||| ||||||||||| |||| |||| || |||||    
T  4014513 taactttattttatcttttgctatagaaatagcttatacataggcgcttat 4014563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 139
Target Start/End: Original strand, 4948620 - 4948650
Alignment:
Q  109 atttaactttattttatcttttgttatagaa 139  Q
    |||||||||||||||||||||||||||||||    
T  4948620 atttaactttattttatcttttgttatagaa 4948650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 5963363 - 5963421
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||||||  |||||||||||| || | ||||||| |||||    
T  5963363 aaacaatttaactttattttatctttcattatagaaatagtttgtacataagcgcttat 5963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Original strand, 10280667 - 10280709
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||||||| |||||||||||||||||||||  |||||||||||    
T  10280667 actttattctatcttttgttatagaaatagcatatgcataagc 10280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 11054165 - 11054123
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||||||||| |||||||||||| |||| |||||||    
T  11054165 actttattttatcttttattatagaaatagcttatacataagc 11054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 11095560 - 11095610
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||| |||| |||||||||||||||| |||| ||||| |||||||||    
T  11095560 actttattgtatcatttgttatagaaatagtttatacataatcacttatat 11095610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 11615499 - 11615453
Alignment:
Q  102 gtaaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||||| |||| ||||||||||||||||||||||| |||||| ||||    
T  11615499 gtaaacaatttgactttattttatcttttgttataaaaatagcttat 11615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 16945076 - 16945126
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttatatatga 168  Q
    ||||||||||||| || ||||||||| |||| |||||||||||||| ||||    
T  16945076 tattttatcttttcttgtagaaatagcttatacataagcacttatacatga 16945126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 19177458 - 19177408
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||| |||| ||||||||| |||| |||||||||||||||    
T  19177458 acttaattttatcttctgttgtagaaatagtttatacataagcacttatat 19177408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 21782649 - 21782707
Alignment:
Q  103 taaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||| |||| ||||||||||| |||||||||||||||||| |||  ||||| ||||||    
T  21782649 taaacaatttgactttattttagcttttgttatagaaatagcttaaacataaacactta 21782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 28586857 - 28586907
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||||||||  ||| ||||| ||| |||||    
T  28586857 actttattttatcttttgttatagaaatagtgtatacataaccacatatat 28586907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 29115304 - 29115350
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    ||||||||||| |||||||| ||||||||| |||| |||||||||||    
T  29115304 actttattttaccttttgttgtagaaatagcttatacataagcactt 29115350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 31694497 - 31694447
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| ||||| |||||||||||| |||| |||| |||||||||||||||    
T  31694497 actttagtttatgttttgttatagacatagcttattcataagcacttatat 31694447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 36646219 - 36646169
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||| |||||||| ||||||| |||||| ||||||||||||| ||||||    
T  36646219 actttagtttatcttatgttataaaaatagtttatgcataagcatttatat 36646169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 39919739 - 39919785
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||| |||||||||||||||| ||| |||| |||||||||||||    
T  39919739 tttatttaatcttttgttatagaattagcttatacataagcacttat 39919785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 42583138 - 42583100
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  42583138 aaacaatttaactttatttcatcttttgttatagaaata 42583100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 4855682 - 4855629
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||| |||||||||| |||||| | || |||||| ||||||    
T  4855682 atttaactttattttattttttgttataaaaatagctaatacataagtacttat 4855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 12460094 - 12460131
Alignment:
Q  117 ttattttatcttttgttatagaaatagattatgcataa 154  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  12460094 ttattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Complemental strand, 14295485 - 14295456
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  14295485 actttattttatcttttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Original strand, 29590831 - 29590860
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  29590831 actttattttatcttttgttatagaaatag 29590860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 32172647 - 32172590
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||| | || |||| ||||||||||||||| ||||||||| |||| |||||||    
T  32172647 tatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagc 32172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 34975357 - 34975312
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcact 159  Q
    ||||||||| |||||||||||||||||||| |||| ||||| ||||    
T  34975357 actttatttcatcttttgttatagaaatagtttatacataatcact 34975312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 1773521 - 1773557
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataag 155  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  1773521 attttatcttttgttatagaaatagcttatacataag 1773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Complemental strand, 1943234 - 1943202
Alignment:
Q  110 tttaactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||||||||| |||||||||||    
T  1943234 tttaactttattttatcttttattatagaaata 1943202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 148
Target Start/End: Complemental strand, 5563681 - 5563649
Alignment:
Q  116 tttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||||||||||||||||||| ||||    
T  5563681 tttattttatcttttgttatagaaatagcttat 5563649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 7674637 - 7674593
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattat 148  Q
    |||| |||||| |||||||||||||||| ||||||||||| ||||    
T  7674637 aaacaatttaaatttattttatcttttggtatagaaatagcttat 7674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 8481201 - 8481157
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    ||||||||||||||||||||| ||||| ||||| ||||| |||||    
T  8481201 tttaactttattttatcttttattatataaataaattatacataa 8481157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 11667142 - 11667102
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataa 154  Q
    ||||||||||||| |||||||| ||||||| ||||||||||    
T  11667142 actttattttatcctttgttattgaaatagtttatgcataa 11667102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 12425560 - 12425508
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| ||||||||||||||||||||||  |||| |||||| |||| |||||||    
T  12425560 aaacaatttaactttattttatcttttactatataaatagtttatacataagc 12425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 12595544 - 12595588
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||||||| ||||||||||| |||| || ||||||||    
T  12595544 tttattttatcttttgctatagaaatagcttatacacaagcactt 12595588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 29117021 - 29117049
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  29117021 actttattttatcttttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 30585510 - 30585542
Alignment:
Q  104 aaacgatttaactttattttatcttttgttata 136  Q
    |||| ||||||||||||||||||||||||||||    
T  30585510 aaacaatttaactttattttatcttttgttata 30585542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Complemental strand, 31208445 - 31208405
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcactta 161  Q
    ||||| ||||||||||||||||  |||||||||||||||||    
T  31208445 tttatattttgttatagaaataacttatgcataagcactta 31208405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 37112339 - 37112391
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| |||||||||| |||||||||||| | ||||||||| |||| |||||||    
T  37112339 aaacaatttaactttgttttatcttttgctgtagaaatagcttatacataagc 37112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 37618935 - 37618979
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||||||||||| | |||||||||| || ||||||||||||||||    
T  37618935 attttatcttttataatagaaatagcttttgcataagcacttata 37618979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 37929858 - 37929898
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||| ||||||||||||||||||||||| |||||| |||||    
T  37929858 tttagtttatcttttgttatagaaatagtttatgcgtaagc 37929898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 38766930 - 38766962
Alignment:
Q  110 tttaactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||| |||||||||||||||||    
T  38766930 tttaactttattttagcttttgttatagaaata 38766962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 38819672 - 38819716
Alignment:
Q  120 ttttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||  ||| ||||||| |||||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatat 38819716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 41981796 - 41981848
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattat-gcataagcacttat 162  Q
    ||||||||||||||||||||| ||||||||||  |||| |||||||| |||||    
T  41981796 ttaactttattttatcttttgatatagaaataacttatagcataagcgcttat 41981848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 42569071 - 42569119
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||| ||||||||||| || | ||||||| |||||    
T  42569071 actttattttatcttttgctatagaaatagctttttcataagcgcttat 42569119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 4549850 - 4549797
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||| ||||    
T  4549850 atttaactttattttatcttttgttatagaaatagcttgtacataagcatttat 4549797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 2194447 - 2194491
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||    
T  2194447 taactttattttatctattgttatagaaatagcttatgcataagc 2194491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 46499935 - 46499995
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| ||||||||||||||||| |||||||||||| ||||  ||||||||||||||    
T  46499935 aaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatat 46499995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 13037836 - 13037793
Alignment:
Q  121 tttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatat 13037793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 47002955 - 47003014
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    |||| |||||||||||||||||||||| |||| ||||||  |||||||||| ||||||||    
T  47002955 aaacaatttaactttattttatcttttattatcgaaataatttatgcataaacacttata 47003014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 49557125 - 49557070
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||||||||||||  |||| ||  |||||||||||    
T  49557125 atttaactttattttatcttttgttatagaaataacttatacagcagcacttatat 49557070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 871024 - 870974
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||||||||||||||||| |||||| |||| |||||||||||||||    
T  871024 acttaattttatcttttgttataaaaatagtttatacataagcacttatat 870974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 7028274 - 7028228
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  7028274 ttaactttattttatcttttgctatagaaatagtttatacataagca 7028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 30259578 - 30259624
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||    
T  30259578 actttattttatattttgttatagaaatagcttgtgcataagcactt 30259624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 34619459 - 34619517
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| ||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||    
T  34619459 aaacaatttaaccttattttatcttttgttatagaaatggcttatacataagcaattat 34619517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 43029494 - 43029544
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatatat 166  Q
    |||||||||||||||||| ||||||||| |||| |||||||||| ||||||    
T  43029494 tttattttatcttttgttgtagaaataggttatacataagcactcatatat 43029544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 164
Target Start/End: Complemental strand, 52286661 - 52286607
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||| ||||||||  |||| ||||||| |||||||    
T  52286661 tttaactttattttatcttttgttgtagaaatatcttattcataagcgcttatat 52286607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 6659677 - 6659632
Alignment:
Q  119 attttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||    
T  6659677 attttatcttttgctatagaaatagtttatacataagcacttatat 6659632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 48748659 - 48748723
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||||||||||||| |||||||| ||||||||||| |||| ||||||||| |||||    
T  48748659 tatgaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacataagcacatatat 48748723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 50319271 - 50319230
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  50319271 actttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 172665 - 172709
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||    
T  172665 ttaactttatgttatcttttgttatagaaatagcttatacataag 172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 23895313 - 23895265
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||||||||| |||| |||||  ||||||||    
T  23895313 tttattttatcttttgttatagaaatagcttatacataataacttatat 23895265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 42397741 - 42397693
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  42397741 ctttattttatgttttgttacagaaatagcttatacataagcacttata 42397693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 45999379 - 45999427
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||| |||||||||||||||||||||| |||| ||| |||||||||    
T  45999379 actttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 1232978 - 1233029
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    ||||||||||||||||| |||||||||| ||| || |||||||||| |||||    
T  1232978 atttaactttattttatgttttgttataaaaacagcttatgcataaacactt 1233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 3887718 - 3887765
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||||||||||||||| ||| ||||||| |||| |||||||    
T  3887718 atttaactttattttatcttttgctattgaaatagcttatacataagc 3887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 143
Target Start/End: Original strand, 4700155 - 4700186
Alignment:
Q  112 taactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||||    
T  4700155 taactttattttatcttttgttatagaaatag 4700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 4768914 - 4768961
Alignment:
Q  113 aactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    ||||||||||||||||||| ||||| ||||| |||| |||||||||||    
T  4768914 aactttattttatcttttggtatagcaatagcttatacataagcactt 4768961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 14737781 - 14737824
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||| |||| |||||||||||||||||||||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaata 14737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 143
Target Start/End: Original strand, 15687154 - 15687193
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatag 143  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  15687154 aaacaatttaactttattttatattttgttatagaaatag 15687193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 29793764 - 29793713
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||| |||||||||||| ||||||||| || | |||||||||||||    
T  29793764 ttaactttatgttatcttttgttgtagaaatagcttgtacataagcacttat 29793713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 38578511 - 38578472
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattat 148  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  38578511 atttaactttatgttatcttttgttatagaaatagcttat 38578472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 38651500 - 38651547
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  38651500 actttagtttatcttttgttatagaattagcttatacataagcactta 38651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 6976931 - 6976885
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagc 156  Q
    ||||||||||| |||||||||||||||||||||  |||| |||||||    
T  6976931 tttaactttatcttatcttttgttatagaaatatcttatacataagc 6976885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 9572194 - 9572228
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||| |||||||||||    
T  9572194 atttaactttattttatcttttgctatagaaatag 9572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 14630044 - 14630094
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||||||||  | ||||||||||||||||||||||||||| |||| |||||    
T  14630044 tatgtaaacagtgtaactttattttatcttttgttatagagatagtttatg 14630094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 15581096 - 15581054
Alignment:
Q  113 aactttattttatcttttgttatagaaatagattatgcataag 155  Q
    |||||||||||||||||||||||| |||||| | |||||||||    
T  15581096 aactttattttatcttttgttataaaaatagctcatgcataag 15581054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 16982027 - 16982077
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| ||||||  |||| ||||| |||||||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacacttatat 16982077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 18434569 - 18434619
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| ||||||| | || || ||||||||||||    
T  18434569 actttattttatcttttgttatggaaataggtaatacagaagcacttatat 18434619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 140
Target Start/End: Original strand, 30815722 - 30815752
Alignment:
Q  110 tttaactttattttatcttttgttatagaaa 140  Q
    |||||||||||||||||||||||||||||||    
T  30815722 tttaactttattttatcttttgttatagaaa 30815752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 31517826 - 31517860
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||| |||||||||    
T  31517826 atttaactttattttatcttttgttgtagaaatag 31517860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 33339507 - 33339561
Alignment:
Q  110 tttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||| ||||||||||||| ||||||||||| |||| ||||| ||| |||||    
T  33339507 tttaacttcattttatcttttggtatagaaatagcttatacataaacacctatat 33339561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 34380424 - 34380378
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||||| ||||||||||| ||||||||| |||||| |||||||||    
T  34380424 actttattgtatcttttgttttagaaatagcttatgcttaagcactt 34380378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 36070234 - 36070200
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    |||||||||||||||||||||||||||| ||||||    
T  36070234 atttaactttattttatcttttgttataaaaatag 36070200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 36151586 - 36151636
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    |||| |||| |||||||||||||||||||||| ||||||| |||| |||||    
T  36151586 aaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 37591409 - 37591367
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcac 158  Q
    ||||||||||||||| |||||||||||| |||| |||||||||    
T  37591409 tttattttatcttttattatagaaatagtttatacataagcac 37591367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 37841987 - 37841929
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||| |||||||||||||||||| |||||||||| ||||| |||| ||| || ||||||    
T  37841987 aaacaatttaactttattttatcatttgttataggaatagcttatacatgagtacttat 37841929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 41638401 - 41638451
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||| |||| || ||||| ||||| |||||||||||||||    
T  41638401 actttattttatcttgtgttctataaataaattatacataagcacttatat 41638451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 44251402 - 44251368
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    |||||||||||||||||||||| ||||||||||||    
T  44251402 atttaactttattttatcttttattatagaaatag 44251368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 45769836 - 45769882
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||||||||||||||  |||  |||||||||||||    
T  45769836 tttattttatcttttgttatagaaataatttacacataagcacttat 45769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 46252768 - 46252802
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatag 143  Q
    |||||||||||||||||||||||||||| ||||||    
T  46252768 atttaactttattttatcttttgttataaaaatag 46252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 49517059 - 49517021
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaata 142  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  49517059 aaacaatttgactttattttatcttttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 172318 - 172277
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagca 157  Q
    |||||||||||||| ||||||||||||| |||| ||||||||    
T  172318 tttattttatctttagttatagaaatagcttatacataagca 172277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 2462948 - 2462903
Alignment:
Q  112 taactttattttatcttttgttatagaaatagattatgcataagca 157  Q
    ||||||||| |||| ||||||||||||||||| |||| ||||||||    
T  2462948 taactttatcttatattttgttatagaaatagcttatacataagca 2462903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 4256128 - 4256173
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataa 154  Q
    ||||||||||||| ||||||||||| ||||||||| |||| |||||    
T  4256128 atttaactttattgtatcttttgttgtagaaatagcttatacataa 4256173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Complemental strand, 7120129 - 7120080
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttata 163  Q
    ||||||||| ||||||||||||| |||||| ||||  |||||||||||||    
T  7120129 actttatttgatcttttgttatataaatagtttatatataagcacttata 7120080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 11211102 - 11211069
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    ||||||||||||||||||||||||| ||||||||    
T  11211102 atttaactttattttatcttttgttctagaaata 11211069  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 17269244 - 17269179
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| ||||||||||  |||||||| ||||||||  |||| |||||||||||||||    
T  17269244 tatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatat 17269179  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 143
Target Start/End: Original strand, 17631192 - 17631221
Alignment:
Q  114 actttattttatcttttgttatagaaatag 143  Q
    ||||||||||||||||||||||||||||||    
T  17631192 actttattttatcttttgttatagaaatag 17631221  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 24915132 - 24915177
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatg 149  Q
    |||| |||||||||||||||||||| || ||||||||||| |||||    
T  24915132 aaacaatttaactttattttatcttctgctatagaaatagtttatg 24915177  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 29128386 - 29128415
Alignment:
Q  111 ttaactttattttatcttttgttatagaaa 140  Q
    ||||||||||||||||||||||||||||||    
T  29128386 ttaactttattttatcttttgttatagaaa 29128415  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 142
Target Start/End: Complemental strand, 36641859 - 36641826
Alignment:
Q  109 atttaactttattttatcttttgttatagaaata 142  Q
    |||| |||||||||||||||||||||||||||||    
T  36641859 atttgactttattttatcttttgttatagaaata 36641826  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 40357967 - 40358028
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatata 165  Q
    |||| |||| |||||||||||||  ||||||||||||||| |||| ||||  ||||||||||    
T  40357967 aaacaatttgactttattttatccattgttatagaaatagcttatacatagtcacttatata 40358028  T

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Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 42351997 - 42352030
Alignment:
Q  114 actttattttatcttttgttatagaaatagatta 147  Q
    ||||||||||| ||||||||||||||||||||||    
T  42351997 actttattttaacttttgttatagaaatagatta 42352030  T

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Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 44032075 - 44032140
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| ||||||||||| |||||||||||||||  | |||| ||||| |||||||||    
T  44032075 tatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatat 44032140  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 3223666 - 3223618
Alignment:
Q  116 tttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||| ||||||||||||||||  ||||| |||||||| ||||||    
T  3223666 tttattttaccttttgttatagaaattcattatacataagcatttatat 3223618  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 10280631 - 10280599
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatag 143  Q
    ||||||||| |||||||||||||||||||||||    
T  10280631 ttaactttactttatcttttgttatagaaatag 10280599  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Complemental strand, 15360873 - 15360845
Alignment:
Q  114 actttattttatcttttgttatagaaata 142  Q
    |||||||||||||||||||||||||||||    
T  15360873 actttattttatcttttgttatagaaata 15360845  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 17420182 - 17420134
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    ||||||||||||||||| ||||| |||||| |||| |||||| ||||||    
T  17420182 actttattttatcttttcttataaaaatagtttatacataagtacttat 17420134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 26184735 - 26184683
Alignment:
Q  109 atttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| ||||||||||| ||||| |||||||||||| |||| |||||| |||||    
T  26184735 atttgactttattttaccttttcttatagaaatagtttatacataagtactta 26184683  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 26293182 - 26293234
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgca 151  Q
    |||| |||| |||| |||||||||||  ||||||||||||||||| |||||||    
T  26293182 tatgaaaacaatttgactttattttactttttgttatagaaatagcttatgca 26293234  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 33527242 - 33527286
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttat 162  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||    
T  33527242 tattttatcttttgttttagaaatagcttattcataagcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 36602775 - 36602719
Alignment:
Q  108 gatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||| |||||||||||||| ||||| |||| |||| |||| ||||| |||||||||    
T  36602775 gatttgactttattttatctattgttgtagatatagcttatacataatcacttatat 36602719  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 45975909 - 45975869
Alignment:
Q  124 atcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||| |||||  |||||||||||||    
T  45975909 atcttttgttatagaaatagcttatgtgtaagcacttatat 45975869  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 27570 - 27508
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||| |||| |||| ||||||||||||||| |||||||||||||  |||| ||||||||||||    
T  27570 tatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcactta 27508  T

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Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 6713 - 6778
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||| | ||||| ||||||||||||||||| |||| |||||||||||||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatat 6778  T

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Target: scaffold0549 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 1812 - 1865
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||||||| ||  ||||  ||||||||||||||    
T  1812 ttaactttattttatcttttgttatagaattatcttatatataagcacttatat 1865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 3902 - 3955
Alignment:
Q  111 ttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||||||| ||  ||||  ||||||||||||||    
T  3902 ttaactttattttatcttttgttatagaattatcttatatataagcacttatat 3955  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 116632 - 116697
Alignment:
Q  99 tatgtaaacgatttaactttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| |||| |||| |||| | ||||| ||||||||||||||||| |||| |||||||||||||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatat 116697  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 160063 - 160107
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcac 158  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  160063 actttattttatcttttgctataggaatagtttatgcataagcac 160107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 20158 - 20111
Alignment:
Q  114 actttattttatcttttgttatagaaatagattatgcataagcactta 161  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||||    
T  20158 actttattttatctttggttatagaaatagtatatacataagcactta 20111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 5675 - 5619
Alignment:
Q  104 aaacgatttaactttattttatcttttgttatagaaatagattatgcataagcactt 160  Q
    |||||| || |||||| ||||||||||  |||| |||||| ||||||||||||||||    
T  5675 aaacgacttgactttaatttatctttttctatataaataggttatgcataagcactt 5619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 4299 - 4365
Alignment:
Q  99 tatgtaaacgatttaactttattttatct-tttgttatagaaatagattatgcataagcacttatat 164  Q
    |||| ||||| ||| |||||||||||||| ||| |||||||||||||||||  |||||||| |||||    
T  4299 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 4365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 42592 - 42546
Alignment:
Q  118 tattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    ||||||||||||||||||||||||   |||| |||||||||||||||    
T  42592 tattttatcttttgttatagaaatgacttatacataagcacttatat 42546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 63377 - 63426
Alignment:
Q  115 ctttattttatcttttgttatagaaatagattatgcataagcacttatat 164  Q
    |||||||||||||||||||||| |||||| ||||  | ||||||||||||    
T  63377 ctttattttatcttttgttataaaaatagcttataaacaagcacttatat 63426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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