View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15349_high_4 (Length: 342)

Name: NF15349_high_4
Description: NF15349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15349_high_4
NF15349_high_4
[»] chr7 (26 HSPs)
chr7 (9-318)||(4970543-4970853)
chr7 (175-300)||(19302480-19302605)
chr7 (190-327)||(33601342-33601479)
chr7 (175-327)||(34744028-34744181)
chr7 (173-298)||(48470074-48470199)
chr7 (189-308)||(27863656-27863775)
chr7 (182-318)||(49019878-49020015)
chr7 (177-318)||(33266405-33266544)
chr7 (197-318)||(19022524-19022645)
chr7 (172-318)||(45593537-45593685)
chr7 (182-313)||(420375-420506)
chr7 (184-258)||(25670512-25670587)
chr7 (184-258)||(34035987-34036061)
chr7 (173-242)||(5947327-5947396)
chr7 (169-233)||(8427107-8427172)
chr7 (177-318)||(11619077-11619218)
chr7 (190-243)||(18765369-18765422)
chr7 (194-319)||(33601963-33602088)
chr7 (175-256)||(44822030-44822111)
chr7 (167-295)||(17944252-17944380)
chr7 (182-233)||(9210916-9210967)
chr7 (219-318)||(21568456-21568555)
chr7 (236-306)||(28614455-28614525)
chr7 (173-314)||(36517593-36517732)
chr7 (251-308)||(28341050-28341106)
chr7 (172-252)||(30748948-30749029)
[»] chr1 (29 HSPs)
chr1 (183-318)||(49938757-49938892)
chr1 (189-318)||(29904761-29904890)
chr1 (172-318)||(2295106-2295252)
chr1 (176-318)||(3233933-3234075)
chr1 (211-297)||(37517119-37517205)
chr1 (173-318)||(14576569-14576713)
chr1 (236-315)||(15477578-15477657)
chr1 (173-308)||(33186325-33186461)
chr1 (177-256)||(50644174-50644253)
chr1 (186-318)||(6556981-6557114)
chr1 (182-318)||(5741616-5741752)
chr1 (182-318)||(13810008-13810144)
chr1 (187-243)||(33204323-33204379)
chr1 (236-318)||(40977381-40977463)
chr1 (253-327)||(47432096-47432170)
chr1 (177-258)||(27146174-27146255)
chr1 (213-314)||(51695450-51695551)
chr1 (211-258)||(7119891-7119938)
chr1 (177-268)||(37617384-37617475)
chr1 (173-243)||(39976125-39976195)
chr1 (182-243)||(1432600-1432661)
chr1 (176-301)||(3887550-3887675)
chr1 (173-233)||(24460316-24460377)
chr1 (189-258)||(38001665-38001734)
chr1 (183-232)||(38116002-38116051)
chr1 (246-306)||(341469-341529)
chr1 (174-318)||(473174-473317)
chr1 (173-233)||(2295286-2295346)
chr1 (211-299)||(27970247-27970335)
[»] chr2 (29 HSPs)
chr2 (173-318)||(26202038-26202183)
chr2 (173-310)||(15305692-15305829)
chr2 (177-318)||(30331770-30331902)
chr2 (174-258)||(27317449-27317533)
chr2 (173-268)||(42419853-42419948)
chr2 (183-327)||(2416313-2416458)
chr2 (173-301)||(7928213-7928342)
chr2 (177-318)||(20952365-20952506)
chr2 (174-318)||(39659425-39659569)
chr2 (173-327)||(9174815-9174970)
chr2 (190-317)||(15757590-15757717)
chr2 (175-325)||(26143559-26143708)
chr2 (189-323)||(750675-750809)
chr2 (220-328)||(11863900-11864009)
chr2 (246-326)||(40279268-40279349)
chr2 (246-326)||(40279338-40279419)
chr2 (174-233)||(15200249-15200309)
chr2 (176-256)||(18179021-18179101)
chr2 (177-231)||(3312174-3312228)
chr2 (172-233)||(15370237-15370299)
chr2 (172-242)||(31744384-31744454)
chr2 (246-327)||(40279197-40279279)
chr2 (173-258)||(4606995-4607080)
chr2 (254-315)||(20926516-20926577)
chr2 (177-233)||(22878192-22878249)
chr2 (190-329)||(1625898-1626038)
chr2 (218-258)||(35485986-35486026)
chr2 (173-228)||(40759259-40759315)
chr2 (193-301)||(41851562-41851670)
[»] chr8 (25 HSPs)
chr8 (173-329)||(30251369-30251526)
chr8 (190-318)||(26771275-26771403)
chr8 (184-317)||(10758183-10758315)
chr8 (176-308)||(36963272-36963403)
chr8 (173-334)||(35534528-35534690)
chr8 (173-243)||(38602412-38602482)
chr8 (189-318)||(12976223-12976351)
chr8 (173-308)||(35643903-35644038)
chr8 (188-314)||(35749500-35749626)
chr8 (173-242)||(12496987-12497056)
chr8 (183-327)||(18133656-18133801)
chr8 (173-233)||(38648446-38648506)
chr8 (173-243)||(43717849-43717919)
chr8 (198-279)||(28763417-28763498)
chr8 (177-268)||(44792716-44792807)
chr8 (172-226)||(1096592-1096646)
chr8 (182-243)||(4560586-4560648)
chr8 (184-258)||(32840912-32840986)
chr8 (174-308)||(43045641-43045775)
chr8 (189-242)||(1058008-1058061)
chr8 (177-257)||(2487927-2488008)
chr8 (173-257)||(6526167-6526252)
chr8 (190-271)||(41589643-41589724)
chr8 (187-238)||(2364389-2364441)
chr8 (183-315)||(3536870-3537002)
[»] chr4 (30 HSPs)
chr4 (174-318)||(54426053-54426197)
chr4 (173-318)||(21731571-21731716)
chr4 (176-301)||(13126494-13126619)
chr4 (184-305)||(22030226-22030347)
chr4 (172-327)||(17822779-17822935)
chr4 (185-301)||(25904150-25904266)
chr4 (172-318)||(39603085-39603230)
chr4 (173-318)||(26780-26924)
chr4 (185-319)||(29657393-29657527)
chr4 (173-318)||(53294029-53294174)
chr4 (176-315)||(2244064-2244203)
chr4 (176-239)||(27043748-27043811)
chr4 (213-327)||(50681044-50681159)
chr4 (182-257)||(52315121-52315196)
chr4 (169-327)||(55302249-55302408)
chr4 (177-290)||(41336798-41336911)
chr4 (176-256)||(49940085-49940165)
chr4 (182-233)||(15173227-15173278)
chr4 (175-258)||(55437146-55437229)
chr4 (212-300)||(25332803-25332891)
chr4 (174-318)||(29388624-29388768)
chr4 (173-233)||(39691064-39691124)
chr4 (173-233)||(44797975-44798035)
chr4 (176-243)||(8705026-8705093)
chr4 (182-243)||(1017112-1017174)
chr4 (185-226)||(33534096-33534138)
chr4 (173-223)||(42403938-42403988)
chr4 (246-318)||(7839349-7839421)
chr4 (183-258)||(18628478-18628554)
chr4 (173-233)||(18815118-18815178)
[»] chr5 (27 HSPs)
chr5 (182-318)||(9107100-9107236)
chr5 (175-318)||(16937800-16937943)
chr5 (177-318)||(12857624-12857765)
chr5 (177-318)||(12857257-12857398)
chr5 (177-242)||(34736446-34736511)
chr5 (219-318)||(3735119-3735218)
chr5 (176-301)||(3932594-3932719)
chr5 (214-318)||(16457935-16458039)
chr5 (185-301)||(40426792-40426908)
chr5 (185-243)||(12425658-12425716)
chr5 (173-314)||(7705913-7706054)
chr5 (253-329)||(25461089-25461166)
chr5 (212-277)||(29815049-29815114)
chr5 (173-280)||(6521125-6521233)
chr5 (182-228)||(9202672-9202718)
chr5 (189-243)||(15015928-15015982)
chr5 (184-254)||(32372686-32372756)
chr5 (184-261)||(38033953-38034031)
chr5 (172-301)||(11700190-11700318)
chr5 (253-318)||(25461642-25461707)
chr5 (246-342)||(40438942-40439038)
chr5 (182-258)||(7674717-7674793)
chr5 (173-205)||(35299888-35299920)
chr5 (174-301)||(36797011-36797139)
chr5 (177-233)||(39594902-39594958)
chr5 (177-233)||(41419414-41419470)
chr5 (177-233)||(41534533-41534589)
[»] chr3 (23 HSPs)
chr3 (192-327)||(30443893-30444029)
chr3 (176-240)||(25447163-25447227)
chr3 (182-281)||(31365112-31365211)
chr3 (190-327)||(18405763-18405901)
chr3 (182-256)||(37795667-37795741)
chr3 (176-318)||(39980739-39980881)
chr3 (174-242)||(20170630-20170698)
chr3 (183-300)||(9832680-9832797)
chr3 (174-307)||(13715488-13715621)
chr3 (175-224)||(16072958-16073007)
chr3 (184-301)||(46031017-46031134)
chr3 (177-256)||(2923549-2923629)
chr3 (260-315)||(35959458-35959513)
chr3 (251-318)||(36189576-36189642)
chr3 (184-256)||(1395710-1395783)
chr3 (174-255)||(42747698-42747779)
chr3 (255-308)||(43062711-43062764)
chr3 (182-318)||(24085262-24085398)
chr3 (177-265)||(24684741-24684829)
chr3 (183-258)||(26542606-26542681)
chr3 (189-260)||(28283530-28283602)
chr3 (189-289)||(46778122-46778222)
chr3 (173-205)||(51929864-51929896)
[»] chr6 (13 HSPs)
chr6 (173-295)||(848022-848143)
chr6 (173-316)||(35070569-35070708)
chr6 (168-266)||(4163215-4163313)
chr6 (168-266)||(4224836-4224934)
chr6 (255-318)||(8201243-8201306)
chr6 (173-268)||(30926579-30926674)
chr6 (176-233)||(281766-281824)
chr6 (176-226)||(21405072-21405122)
chr6 (173-231)||(35069527-35069585)
chr6 (174-258)||(103500-103584)
chr6 (274-318)||(160968-161012)
chr6 (227-327)||(10616683-10616782)
chr6 (222-318)||(29754063-29754159)
[»] scaffold0221 (1 HSPs)
scaffold0221 (169-327)||(22231-22390)
[»] scaffold0103 (1 HSPs)
scaffold0103 (251-308)||(51997-52054)
[»] scaffold0057 (1 HSPs)
scaffold0057 (190-287)||(24662-24759)


Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 9 - 318
Target Start/End: Original strand, 4970543 - 4970853
Alignment:
Q  9 caagaatataaatgagaatgaattaacatgataaggaacttcctcgcaggggaaataggcaaagcaaaaattaaaaagagaaaatccctaagtatctaac 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4970543 caagaaaataaatgagaatgaattaacatgataaggaacttcctcgcaggggaaataggcaaagcaaaaattaaaaagagaaaatccctaagtatctaac 4970642  T
Q  109 atatcagtcaattggcacccttcaaatgaagcatcagttgaacctcatcaaaaatacttatataggcctgttaggattgacttatttgagcttatctcgt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  4970643 atatcagtcaattggcacccttcaaatgaagcatcagttgaacctcatcaaaaagacttatataggcctgtttggattgacttatttgagcttatctcgt 4970742  T
Q  209 gacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttc-aaaaacttttttcagtttattttaataagttctctaatat 307  Q
    |||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||| |||||     ||||||||||||| ||||||||||||||||    
T  4970743 gacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttcaaaaaaaaaaattcagtttattttcataagttctctaatat 4970842  T
Q  308 atcttataaaa 318  Q
    |||||||||||    
T  4970843 atcttataaaa 4970853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 19302480 - 19302605
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaact 274  Q
    |||||| | ||||||||||||||||||||||  |||||||||| |||||||| | ||||  |||| |||  |||||| |||||| ||||||||| |||||    
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact 19302579  T
Q  275 tttttcagtttattttaataagttct 300  Q
    |||||||  ||||||| |||||||||    
T  19302580 tttttcaacttattttcataagttct 19302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 190 - 327
Target Start/End: Original strand, 33601342 - 33601479
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattt 289  Q
    ||||||||||||||||  || ||||||| |||||||||| ||| | ||||||||  |||||| |||||| || |||||| || |||||||||| |||  |    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaat 33601441  T
Q  290 taataagttctctaatatatcttataaaacagcttata 327  Q
    | ||||||||||||| ||| ||||||||||| ||||||    
T  33601442 tcataagttctctaagatagcttataaaacaacttata 33601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 327
Target Start/End: Complemental strand, 34744181 - 34744028
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaact 274  Q
    |||||| | ||||| | ||||||||||||||  | |||||||  ||||||||||||||| ||||||| |  |||| |||||||| ||||||||| || ||    
T  34744181 cctgtttgaattgaataatttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagct 34744082  T
Q  275 tttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
    ||||||   ||||||| |||||||||| |||||| ||||| |||||| ||||||    
T  34744081 tttttcgccttatttttataagttctccaatatagcttatgaaaacaacttata 34744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 298
Target Start/End: Complemental strand, 48470199 - 48470074
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    ||||||||||||||| |||||||||||||||||   ||||||||| || ||||| ||||||  ||||||||  |||||| ||||||||| |||||| ||     
T  48470199 ggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataag 48470100  T
Q  273 cttttttcagtttattttaataagtt 298  Q
    ||||||| || |||| || |||||||    
T  48470099 cttttttgagcttatgttcataagtt 48470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 308
Target Start/End: Original strand, 27863656 - 27863775
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatt 288  Q
    ||||||||||||||||   || ||||||| |||||||||| ||||  ||||||||  |||||| |||  |  |||||||||||||||||||||| ||||     
T  27863656 cttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatg 27863755  T
Q  289 ttaataagttctctaatata 308  Q
    || |||||||||||||||||    
T  27863756 ttcataagttctctaatata 27863775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 49020015 - 49019878
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt-actaaaacaacttatggcaattttcaaaaacttttttc 280  Q
    |||||||||||||  |||||||||  ||||||| || |||||||||||||||  |||||||    |||| | ||||||  |||||||| || ||||||||    
T  49020015 ggattgacttattgtagcttatctgctgacatatgttttgtgagactgtttgggagaacttgtggaaaaaagcttatgaaaattttcacaatcttttttc 49019916  T
Q  281 agtttattttaataagttctctaatatatcttataaaa 318  Q
     ||||||||| |||||||||  |||||| |||||||||    
T  49019915 ggtttattttcataagttctacaatataacttataaaa 49019878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 33266405 - 33266544
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| ||||||||||||||||||||||||   ||||||||| |||||| ||| ||||  |||| |||| ||||||||  ||| |||||  |||||  |||    
T  33266405 tgtttggattgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaatttacgaaaacaac--atgacaattcgcaaaagtttt 33266502  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||| |||||||  ||| || |||||| || |||||||||    
T  33266503 tttcagcttatttttgtaatttttctaatgtagcttataaaa 33266544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 318
Target Start/End: Original strand, 19022524 - 19022645
Alignment:
Q  197 agcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataag 296  Q
    |||||||||  |||||| ||| |||||||| ||||||  |||| |||  ||||||||||||| ||||||||| ||  | | ||||  ||||||| |||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T
Q  297 ttctctaatatatcttataaaa 318  Q
    ||||| |||||| |||||||||    
T  19022624 ttctccaatatagcttataaaa 19022645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 318
Target Start/End: Complemental strand, 45593685 - 45593537
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcg-tgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaa 270  Q
    ||||||||| |||||| |||||||||| |||| |   |||||||||  |||||||||||||||  ||||||||  |||||| || ||| || |||||| |    
T  45593685 aggcctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcata 45593586  T
Q  271 aactttttt-cagtttattttaataagttctctaatatatcttataaaa 318  Q
    | ||||||| |||||||||||  ||||||||| || ||| |||| ||||    
T  45593585 agcttttttccagtttattttcgtaagttctccaagatagcttagaaaa 45593537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 313
Target Start/End: Complemental strand, 420506 - 420375
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    |||||| ||| ||||||||| |||  || | ||||  |||||||||||||||  ||||||||  ||||||| ||||| || ||||| ||| | |||||||    
T  420506 ggattggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttca 420407  T
Q  282 gtttattttaataagttctctaatatatctta 313  Q
      ||||||| |||||||||| |||||| ||||    
T  420406 acttattttcataagttctccaatatagctta 420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 25670512 - 25670587
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||||| ||||||||||||  ||||||||| |||||||||||||||||  | ||||||  |||||||||||||    
T  25670512 attgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatg 25670587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 34036061 - 34035987
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||||||||||||||||||  ||||||| || ||||||||||  ||| |||||||||  |||| ||||||||    
T  34036061 attgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatg 34035987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 5947396 - 5947327
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    |||||||| |||||| |||||||||||||||||  ||  |||||| || |||||||||||| ||||||||    
T  5947396 ggcctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaactt 5947327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 8427172 - 8427107
Alignment:
Q  169 tataggcctgttaggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttg 233  Q
    ||||||||| || ||||||| ||||||||||||||||  | |||||||| ||||||||||||||||    
T  8427172 tataggcctatttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttg 8427107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 11619077 - 11619218
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| |||||| |||||||||||||||||  |||||||||  |  ||| || | |||  |||| |||  ||||||||||||| ||||||||| || ||||    
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttt 11619176  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||  ||| ||| |||||||||| ||  || |||||||||    
T  11619177 tttcaacttaatttcataagttctccaacgtagcttataaaa 11619218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 18765422 - 18765369
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    ||||||||||||||||  |||||||||| |||||||||||||||  ||||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaactta 18765369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 33601963 - 33602088
Alignment:
Q  194 ttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaat 293  Q
    ||||||||||||  || ||||||| || ||||||| ||| | | ||||||  |||||| |||||| || |||||| || | |||||||| |||  || ||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcat 33602062  T
Q  294 aagttctctaatatatcttataaaac 319  Q
    ||||||||||| ||| ||||||||||    
T  33602063 aagttctctaagatagcttataaaac 33602088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 44822111 - 44822030
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    |||||| ||||||||||||||||| ||||||  |||||||||| |||||||| |||||   ||| || || |||||||||||    
T  44822111 cctgtttggattgacttatttgagtttatctgctgacataagttttgtgagattgtttagcagacctcacgaaaacaactta 44822030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 17944252 - 17944380
Alignment:
Q  167 tatataggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaatttt 266  Q
    ||||| |||||||| ||| |||||||||| |||||||||  || ||||||  ||||||||||||||   | ||||||  |||||| |||||| || ||||    
T  17944252 tatatgggcctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacactttt 17944351  T
Q  267 caaaaacttttttcagtttattttaataa 295  Q
    || |  |||||||||| ||| ||| ||||    
T  17944352 catatgcttttttcagcttaatttcataa 17944380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 9210967 - 9210916
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    ||||||||||||||||||||||||  ||| |||||| || ||||||||||||    
T  9210967 ggattgacttatttgagcttatctactgatataagttttctgagactgtttg 9210916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 21568456 - 21568555
Alignment:
Q  219 ttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||||||||||  ||||||||  |||||| |||||  ||||||||| || || ||||||  ||| ||  |||||||||| |||||| |||||||||    
T  21568456 ttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaa 21568555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 28614525 - 28614455
Alignment:
Q  236 agaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaata 306  Q
    ||||||||  |||||||| |||  ||||||||| || |||||||||||||| ||| |||||||||| ||||    
T  28614525 agaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaata 28614455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 36517732 - 36517593
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| ||||| | ||||||||||||| ||  || ||||||| || | ||||||||||  |||||||| ||||||| ||  || || | |||| ||     
T  36517732 ggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataag 36517635  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttat 314  Q
    || ||||||||||||||| |||| ||||| || ||| |||||    
T  36517634 ctattttcagtttattttcataatttctccaagatagcttat 36517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 28341050 - 28341106
Alignment:
Q  251 aacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatata 308  Q
    |||||||| |||||||||||| |||||| ||| ||| ||| |||||||||||||||||    
T  28341050 aacttatgacaattttcaaaagctttttccagctta-tttcataagttctctaatata 28341106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 30748948 - 30749029
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtc-ttgtgagactgtttgcaagaacttactaaaacaa 252  Q
    ||||||||| | ||||| ||||||||||||||||  ||||||||| |  ||||||||||||||  ||||||||  |||||||    
T  30748948 aggcctgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaa 30749029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 318
Target Start/End: Complemental strand, 49938892 - 49938757
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcag 282  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||| ||||||  ||||||||  |||||| |||||| |||||||||||| |||||||||     
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  283 tttattttaataagttctctaatatatcttataaaa 318  Q
     ||||||| ||||||||||||||||| |||||||||    
T  49938792 cttattttcataagttctctaatatagcttataaaa 49938757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 29904890 - 29904761
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatt 288  Q
    |||||||||||||||||  |  ||||||| |||||||||||||||  ||||||||  |||||| ||||||||||||||||||| |||||||||  |||||    
T  29904890 cttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttatt 29904791  T
Q  289 ttaataagttctctaatatatcttataaaa 318  Q
    || ||||||||| |||||||  ||||||||    
T  29904790 ttcataagttctataatatagtttataaaa 29904761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 318
Target Start/End: Complemental strand, 2295252 - 2295106
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa 271  Q
    ||||||||| | |||| |||||||||||||||||  || ||||||| |||||||||||||||  ||||||||  |||||| |||||| ||||||||| ||    
T  2295252 aggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataa 2295153  T
Q  272 acttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
     || | ||||  ||||||| | ||||||||| ||||| |||||||||    
T  2295152 gctctattcaacttattttcacaagttctctgatatagcttataaaa 2295106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 176 - 318
Target Start/End: Original strand, 3233933 - 3234075
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| |||||||||||||||||||||||| ||| | ||||| ||||||||||||| |  ||||||||  ||||||||||||  || |||||| ||  ||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  276 ttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||   ||||||| |||||||||| |||||| |||||||||    
T  3234033 ttttctacttattttcataagttctccaatatagcttataaaa 3234075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 297
Target Start/End: Original strand, 37517119 - 37517205
Alignment:
Q  211 cataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagt 297  Q
    ||||||| |||||||||||| || |||||||||| |||||| |||||| |||||||||||| ||||||||| |||||||| ||||||    
T  37517119 cataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttcataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 14576569 - 14576713
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||||||||||||  || | ||| | |||||  ||||||||  | |||||   |||||| |||||| ||||||||||||     
T  14576569 ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaag 14576668  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||    
T  14576669 cttttttcagcttattttca-aagttctctaatatagcttataaaa 14576713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 315
Target Start/End: Complemental strand, 15477657 - 15477578
Alignment:
Q  236 agaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttata 315  Q
    ||||||||  |||||| |||||| |||||||||||| |||||||||| |||| || ||||||||||||||||| ||||||    
T  15477657 agaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 308
Target Start/End: Complemental strand, 33186461 - 33186325
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaatttt-caaaa 271  Q
    |||||||| |||||| |||||||||| |||||   || ||||||| |||||||||||| |   ||||||||  |||||   ||||| ||||||| |||||    
T  33186461 ggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaaa 33186362  T
Q  272 acttttttcagtttattttaataagttctctaatata 308  Q
     |||||||||| ||||||  |||||||||||||||||    
T  33186361 gcttttttcagcttatttatataagttctctaatata 33186325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 50644174 - 50644253
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    |||| ||||||||||||||||||||||||  | ||||| || |||||||||||||||  ||||||||  |||||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 318
Target Start/End: Complemental strand, 6557114 - 6556981
Alignment:
Q  186 tgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa-acttttttcagtt 284  Q
    |||||||||||| |||||||  | |||||||| |||||||||| ||||  ||||||||  |||| | |||||| || |||||||||   |||||| || |    
T  6557114 tgacttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggttttttttagct 6557015  T
Q  285 tattttaataagttctctaatatatcttataaaa 318  Q
    |||| | ||||||||| ||||||| |||||||||    
T  6557014 tattgtcataagttctttaatataacttataaaa 6556981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 5741752 - 5741616
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    |||||| |||||||||||||| ||  |  ||||||| ||||   ||||||||  ||||||||  ||||||||||||| ||||||   ||   ||||||||    
T  5741752 ggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaatttcataagtattttttca 5741653  T
Q  282 gtttattttaataagttctctaatatatcttataaaa 318  Q
    | | ||||| ||||||||||||||||| |||||||||    
T  5741652 gctgattttcataagttctctaatatagcttataaaa 5741616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 13810144 - 13810008
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    |||||| |||||||| ||||||||  |||| ||||| |||||||||| |||   ||||||||  || |||  ||||| ||||||||||||  |||| | |    
T  13810144 ggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttctta 13810045  T
Q  282 gtttattttaataagttctctaatatatcttataaaa 318  Q
    | ||||||| | |||||||||||||||  ||||||||    
T  13810044 gcttattttcacaagttctctaatatagtttataaaa 13810008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 33204323 - 33204379
Alignment:
Q  187 gacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||  ||||||||    
T  33204323 gacttatttgagcttatctactgacataagttttgtgagactgtttgggagaactta 33204379  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 40977381 - 40977463
Alignment:
Q  236 agaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||  ||||||| ||||| |||||||||||| |||||| ||| ||||||| ||| ||||||| ||||  |||||||||    
T  40977381 agaacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctcttatatggcttataaaa 40977463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 47432170 - 47432096
Alignment:
Q  253 cttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaacagcttata 327  Q
    ||||||| |||||||| || |||||||||| ||||||| |||| ||||  |||||| ||||||||||| ||||||    
T  47432170 cttatggtaattttcacaagcttttttcagcttattttcataaattcttcaatataacttataaaacaccttata 47432096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 258
Target Start/End: Original strand, 27146174 - 27146255
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||| ||||||||| ||||||||||||||  || ||||||| ||||||||||  ||| |||||||||   ||||||||||||    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatg 27146255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 314
Target Start/End: Original strand, 51695450 - 51695551
Alignment:
Q  213 taagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatctt 312  Q
    ||||||||||||||||||||| |||||||||   |||||||||||  || | |||| || || ||||||| ||||||| |||| ||||| || ||| |||    
T  51695450 taagtcttgtgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagctt 51695549  T
Q  313 at 314  Q
    ||    
T  51695550 at 51695551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 7119891 - 7119938
Alignment:
Q  211 cataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||| ||||||||||||||||||||| |||  |||||||||||||    
T  7119891 cataagttttgtgagactgtttgcaagaatttatgaaaacaacttatg 7119938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 37617384 - 37617475
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    |||| ||||||||||||||||| ||||||  || | ||||| |||||||||||||||| |||| |||  |||||| ||| || ||| |||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttca 37617475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 39976125 - 39976195
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||| ||| ||| ||||||||||||| ||||||  |||||||||| |||||| ||||||||  ||||||||    
T  39976125 ggccagtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaactta 39976195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 1432661 - 1432600
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||||| ||||||||||||||||    ||||||| | ||||||||||||||| |||||||||    
T  1432661 ggattggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaactta 1432600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 3887550 - 3887675
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| ||||||||||||||||||||  ||  ||  |||||| |||| || ||||||| |||||||||  |||||| |||||| || | |||| || ||     
T  3887550 ctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctg 3887649  T
Q  276 ttttcagtttattttaataagttctc 301  Q
    |||| |  ||||||| ||||||||||    
T  3887650 tttttaacttattttcataagttctc 3887675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 24460316 - 24460377
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttg 233  Q
    |||||||| |||||||||||||||| |||||||  |||||| ||  ||||||||||||||||    
T  24460316 ggcctgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgtttg 24460377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 38001734 - 38001665
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||||||||| |||||   |||||||||| |||||||||||||||  ||||||||  |||||| ||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatg 38001665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 38116002 - 38116051
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgttt 232  Q
    |||||||||||||||||||||||  |||| ||||| ||||||||| ||||    
T  38116002 gattgacttatttgagcttatctactgacgtaagttttgtgagacggttt 38116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 341529 - 341469
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaata 306  Q
    ||||||||||||| ||||||||| ||  |||||||| | | |||| |||||||||||||||    
T  341529 aaaacaacttatgacaattttcataagtttttttcaatctgttttcataagttctctaata 341469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 318
Target Start/End: Complemental strand, 473317 - 473174
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    |||||||  ||||| ||||||||||| |||||  || |||||||  ||||| ||  ||||  ||||||||  |||| | |||||  ||||||||| || |    
T  473317 gcctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagc 473219  T
Q  274 ttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||  ||||||| |||||||||| |||| | |||||||||    
T  473218 ttttttcaacttattttcataagttctccaatagaacttataaaa 473174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 2295346 - 2295286
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||||||| |||||| |||||||||||||||||  |||| ||||| || ||||||| ||||    
T  2295346 ggcctgtttggattggcttatttgagcttatctactgacttaagttttctgagactatttg 2295286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 27970247 - 27970335
Alignment:
Q  211 cataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttc 299  Q
    ||||||| |||||| ||| ||||  ||||||||  |||||   ||||| || |||||| || |||||||||||||||||| ||||||||    
T  27970247 cataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttc 27970335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 173 - 318
Target Start/End: Complemental strand, 26202183 - 26202038
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| ||||| |||||||||| |||||||  |||||||||| |||||||| | ||||| |||| |||  | ||||||||||| ||||||||| ||     
T  26202183 ggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcataag 26202084  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||    
T  26202083 cttttttcaacttattttcataagttctccaatatatcttataaaa 26202038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 310
Target Start/End: Complemental strand, 15305829 - 15305692
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||||||||||||  |||||||||| |||||| ||||||||  |||||||   | ||||||||||||||||||||| ||     
T  15305829 ggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataag 15305730  T
Q  273 cttttttcagtttattttaataagttctctaatatatc 310  Q
     ||||||||  ||||||| |||||||||| ||| ||||    
T  15305729 tttttttcaacttattttcataagttctccaatttatc 15305692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 30331902 - 30331770
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| |||||||||||||| |||||||||  |||||||||| |||||||||||||||  ||||||||  |||| | |||||| ||||||||| || |       
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagc--- 30331806  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
          |||||||| |||||||||| ||||||||||||||||    
T  30331805 ------tttattttcataagttctccaatatatcttataaaa 30331770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 27317533 - 27317449
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||| ||||||||||||||||||||||||   ||||||||| || ||||||||||||  ||||||||  |||||||||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 42419948 - 42419853
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    ||||| || ||||||||||||||||| ||||||  |||||||||| || ||||||||||||  ||||||||| |||||| |||||| || ||||||    
T  42419948 ggcctttttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 2416458 - 2416313
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcag 282  Q
    |||||||||||||||| ||||||  | |||||||| |||||| |||| ||| ||||||||| ||||||| ||| || || | |||| || ||  ||||||    
T  2416458 gattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcacaagctaatttcag 2416359  T
Q  283 tttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
      || ||| ||||||||||| ||||| ||||| |||||||||||||    
T  2416358 catactttcataagttctcttatataacttataaaaacagcttata 2416313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 7928213 - 7928342
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatgg-caattttcaaaa 271  Q
    |||||||| |||||| |||||||||||||||||  ||||||||||  |||||||||||| | ||||||||   |||||| ||||||| || | |||| ||    
T  7928213 ggcctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataa 7928312  T
Q  272 acttttttcagtttattttaataagttctc 301  Q
      | ||||||| ||||||| ||||||||||    
T  7928313 gttgttttcagcttattttcataagttctc 7928342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 318
Target Start/End: Complemental strand, 20952506 - 20952365
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| |||||||||||||||||||||| |  || || |||| |||| ||||| |||   ||||||||  ||||||  ||||| |||||||||  ||||||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||  ||||||| |||||||||| |||||| || ||||||    
T  20952406 tttcaacttattttcataagttctccaatatagctaataaaa 20952365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 318
Target Start/End: Original strand, 39659425 - 39659569
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    ||||||| |||||| |||  ||||||||||||  |||||||||| | ||||| |||| ||  ||||||||| |||||| |||||| ||| |||   || |    
T  39659425 gcctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagc 39659524  T
Q  274 ttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||| |||  |||| || ||||||||||||||||| |||||||||    
T  39659525 ttttgtcaccttatcttcataagttctctaatatagcttataaaa 39659569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 327
Target Start/End: Complemental strand, 9174970 - 9174815
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    ||||| || ||||| ||||||||||||||||||  || |||||||  ||||||||||||||   |  |||  |||||||||||||| || | |||| ||     
T  9174970 ggcctatttggatttacttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttcataag 9174871  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
    || ||||||| ||||||| ||||| ||| ||| ||| ||||| |||||||||||||    
T  9174870 ctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttata 9174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 317
Target Start/End: Original strand, 15757590 - 15757717
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattt 289  Q
    |||||||||||||| |  || ||||||| ||||||||||| |||  |||| |||  |||||  |||||| ||||||||| || |||||||||| ||||||    
T  15757590 ttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattt 15757689  T
Q  290 taataagttctctaatatatcttataaa 317  Q
    | ||| |||||||  |||| ||||||||    
T  15757690 tcatacgttctcttgtatagcttataaa 15757717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 325
Target Start/End: Original strand, 26143559 - 26143708
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaact 274  Q
    |||||| |||||| ||| |||||||||||||  |||||||| | |||  ||||||||||  ||||||||| ||||||||||||| || | |||| |   |    
T  26143559 cctgtttggattggcttgtttgagcttatctactgacataaattttg--agactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggtt 26143656  T
Q  275 tttttcagtttattttaataagttctctaatatatcttat-aaaacagctta 325  Q
     ||||||| ||||||| |||||||||| ||  || ||||| |||||||||||    
T  26143657 attttcagcttattttcataagttctccaagttagcttatgaaaacagctta 26143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 323
Target Start/End: Complemental strand, 750809 - 750675
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatt 288  Q
    |||||||||| ||||||| || |||| || |||||||| ||||||||||||||||  |||| | || ||| || | |||| || || |||| || |||||    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatt 750710  T
Q  289 ttaataagttctctaatatatcttataaaacagct 323  Q
    |  |||||||||| || ||| ||||| ||||||||    
T  750709 tgcataagttctccaagatagcttatgaaacagct 750675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 11864009 - 11863900
Alignment:
Q  220 tgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaa 318  Q
    ||||||||||||||  ||||| |   ||||||||||||| || |||||| |||||||||| |  |||||||||||||||||  ||||||  |||| ||||    
T  11864009 tgtgagactgtttgggagaacatttgaaaacaacttatgacatttttcataaactttttttaacttattttaataagttcttcaatataggttatgaaaa 11863910  T
Q  319 cagcttataa 328  Q
     |||||||||    
T  11863909 gagcttataa 11863900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 40279349 - 40279268
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttat 326  Q
    |||||||||||||||| | |||| ||||| ||||||| | ||||| |||||||||| |||||| ||||| |||||| |||||    
T  40279349 aaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 326
Target Start/End: Complemental strand, 40279419 - 40279338
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttat 326  Q
    |||||||||||||||| | |||| ||||| ||||||| | ||||| |||||||||| |||||| ||||| |||||| |||||    
T  40279419 aaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 15200249 - 15200309
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttg 233  Q
    ||||||| ||||||| ||||||||||||||||  || ||||||| ||||||||||||||||    
T  15200249 gcctgttcggattgatttatttgagcttatctgttggcataagtacttgtgagactgtttg 15200309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 18179101 - 18179021
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    ||||| ||||||||||||||||||||||||  | |||||||| ||||||||| | |    ||||||||| |||||||||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgtgagaccgctcaagagaacttacgaaaacaactta 18179021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 3312228 - 3312174
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtt 231  Q
    |||| |||||| |||||||||||||||||  |||| ||||| |||||||||||||    
T  3312228 tgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgtt 3312174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 15370237 - 15370299
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttg 233  Q
    ||||||||| ||||||||||||||||||||||||  || ||||||   |||||||||||||||    
T  15370237 aggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttg 15370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 31744454 - 31744384
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    ||||||||| |||||| |||||||| ||||||||   ||||||||| || ||||||||||||  |||||||    
T  31744454 aggcctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaactt 31744384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 40279279 - 40279197
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
    |||||||||||||||| | |||| ||||| ||||||| | ||||| |||||||||| || ||| ||||| |||||| ||||||    
T  40279279 aaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttata 40279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 4607080 - 4606995
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||||||| |||||| |||||||||||||||||    | |||||| |||||||||| ||||  |||||||   |||||||||||||    
T  4607080 ggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatg 4606995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 20926577 - 20926516
Alignment:
Q  254 ttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttata 315  Q
    ||||| |||||||||  | |||||||||  ||||||| ||||||||||||||||| ||||||    
T  20926577 ttatgacaattttcattagcttttttcaacttattttcataagttctctaatatagcttata 20926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 22878249 - 22878192
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttg 233  Q
    |||| |||||||||||||||||||||||   |||||||||  ||||||||||||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttg 22878192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 329
Target Start/End: Complemental strand, 1626038 - 1625898
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattt 289  Q
    ||||||||||||||| | |||||||||| |||| ||||| ||||  ||||||||  |||  | |||||| |||| |||| ||  | ||||||| | ||||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattt 1625939  T
Q  290 taataagttctctaatatatcttat-aaaacagcttataac 329  Q
    |  ||||||||| || ||| ||||| |||||| ||||||||    
T  1625938 tcgtaagttctccaagatagcttatgaaaacaacttataac 1625898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 35486026 - 35485986
Alignment:
Q  218 cttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||||||||||||  ||||||||||||| |||||||||    
T  35486026 cttgtgagactgtttgagagaacttactaaagcaacttatg 35485986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 40759315 - 40759259
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataag-tcttgtgagact 228  Q
    |||||||| |||||| |||||||||||||||||  |||||||||  |||||||||||    
T  40759315 ggcctgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 301
Target Start/End: Complemental strand, 41851670 - 41851562
Alignment:
Q  193 tttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaa 292  Q
    |||||||||||||  ||||| |||| ||||||||||| |||  |||| |||   |||||||||||| || |||||| || ||||| |||| ||| ||| |    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttca 41851571  T
Q  293 taagttctc 301  Q
    ||| |||||    
T  41851570 taaattctc 41851562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 173 - 329
Target Start/End: Original strand, 30251369 - 30251526
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||||||||||||  |||||||||| | |||||||||||||  ||||||||| |||||| ||||| ||| |||||| ||     
T  30251369 ggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataag 30251468  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttataac 329  Q
    |||||| ||| ||||||| ||||||  || || ||| ||||| |||||||||||||||    
T  30251469 ctttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttataac 30251526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 190 - 318
Target Start/End: Complemental strand, 26771403 - 26771275
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattt 289  Q
    |||| |||||||||||   | ||||||| |||||||||||||||  ||||||||  |||||| |||||| |||||||||||| | |||||||  ||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattt 26771304  T
Q  290 taataagttctctaatatatcttataaaa 318  Q
    | |||||||||||||||||||||||||||    
T  26771303 tcataagttctctaatatatcttataaaa 26771275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 317
Target Start/End: Original strand, 10758183 - 10758315
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagt 283  Q
    |||||||||||||| |||||||  | |||||||| |||||||||||||||  |||| |||  |||||| |||||| |||||||||||| ||||||||||     
T  10758183 attgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaaagcttttttcagc 10758282  T
Q  284 ttattttaataagttctctaatatatcttataaa 317  Q
    || |||| |||||||  |||||||| ||||||||    
T  10758283 ttgttttcataagtt-gctaatatagcttataaa 10758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 36963272 - 36963403
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| |||||| |||||||||||| ||||  || ||||||| |||||||||||||||  ||||||||| |||||| ||| || |||||||||||| |||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagctt 36963371  T
Q  276 ttttcagtttattttaataagttctctaatata 308  Q
    ||| ||  ||||||| || ||||||||||||||    
T  36963372 tttacaacttatttt-attagttctctaatata 36963403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 35534528 - 35534690
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    ||||||||  || ||||||||||||||||||||  | |||||||| |||||||||||||||  |||||||   |||||| |||||| ||||||| | ||     
T  35534528 ggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaag 35534627  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttataacctaca 334  Q
    |||||||| | ||| ||| |||||||||| |||||| ||||| |||||| | |||||| ||||    
T  35534628 cttttttcggcttactttcataagttctccaatataacttatgaaaacaacatataacataca 35534690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 38602482 - 38602412
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||||||| |||||||  ||||||||    
T  38602482 ggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaactta 38602412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 189 - 318
Target Start/End: Complemental strand, 12976351 - 12976223
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatt 288  Q
    |||||||||||||||||  |  ||||||  ||||||||||||||   ||||||||  | |||| ||| |  |||||||||||| |||||||||| |||||    
T  12976351 cttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagcttatt 12976252  T
Q  289 ttaataagttctctaatatatcttataaaa 318  Q
    | | |||||||||||||||| |||||||||    
T  12976251 tca-taagttctctaatatagcttataaaa 12976223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 308
Target Start/End: Original strand, 35643903 - 35644038
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||| ||||||||  || ||||| | |||||||||||||||  | ||||||  |||| |  ||||| ||||||||| ||     
T  35643903 ggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 35644002  T
Q  273 cttttttcagtttattttaataagttctctaatata 308  Q
    |||||||||  ||||||| ||||| |||| ||||||    
T  35644003 cttttttcaacttattttcataagctctccaatata 35644038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 35749500 - 35749626
Alignment:
Q  188 acttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttat 287  Q
    ||||| ||||||||||||  |||||||||| ||| ||| |||||||  ||||||||  |||||| ||| | ||| |||||| ||||||||||||   |||    
T  35749500 acttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatat 35749599  T
Q  288 tttaataagttctctaatatatcttat 314  Q
    ||| ||||||||| ||| ||| |||||    
T  35749600 tttcataagttctttaagatagcttat 35749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 12496987 - 12497056
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    ||||| || ||||||| ||||||||||||||||| || ||||||| |||||||||||||||  |||||||    
T  12496987 ggcctatttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaactt 12497056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 327
Target Start/End: Complemental strand, 18133801 - 18133656
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcag 282  Q
    ||||| ||||||| |||||||||  |   |||||| |||||||||||||||  ||| |||   ||| || |||||  ||||||||| || ||||||||||    
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcag 18133702  T
Q  283 tttattttaataagttctctaatatatcttataaaa-cagcttata 327  Q
     ||||||| |||||||||| ||||||  |||||||| |||||||||    
T  18133701 cttattttcataagttctccaatatagtttataaaaccagcttata 18133656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 38648506 - 38648446
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    ||||||||||||||| ||||||| || ||||||  |||||||||| |||||||||||||||    
T  38648506 ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttg 38648446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 243
Target Start/End: Original strand, 43717849 - 43717919
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    ||||| || |||||| |||||||||||||||||  |||||||||| |||||||||| ||||  ||||||||    
T  43717849 ggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaactta 43717919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 28763498 - 28763417
Alignment:
Q  198 gcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactttttt 279  Q
    |||||||| || |||||||| |||||||||||||||  ||||||||  |||||| |||||  ||||||||| || |||||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttt 28763417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 44792807 - 44792716
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    |||| |||||| |||||||||||||||||  ||  |||| |  |||||||||||||   ||||||||  | |||||||||||||||||||||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaacttagaacaacaacttatggcaattttca 44792716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 1096646 - 1096592
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgaga 226  Q
    |||| |||| ||||||||||||||||| |||| | ||||||||||| ||||||||    
T  1096646 aggcatgtttggattgacttatttgagtttatttagtgacataagttttgtgaga 1096592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 4560648 - 4560586
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttgcaagaactta 243  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||  |||||| |||||||||    
T  4560648 ggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaactta 4560586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 32840912 - 32840986
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||||| ||||||||||||  | ||| |||| ||| |||||||||||  ||||||||  |||||||||||||    
T  32840912 attgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatg 32840986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 308
Target Start/End: Original strand, 43045641 - 43045775
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    ||||||| |||||| ||||||| |||||||||  |  ||||||  ||||||||||||||   ||| ||||  |||||| ||||   ||||||| | || |    
T  43045641 gcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagc 43045740  T
Q  274 ttttttcagtttattttaataagttctctaatata 308  Q
    ||||||||  ||||||| |||||||||| ||||||    
T  43045741 ttttttcaacttattttcataagttctccaatata 43045775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 1058008 - 1058061
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    |||||||||||||||||  | |||||||| |||||||||||||||  |||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaactt 1058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 2487927 - 2488008
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaacttactaaaacaacttat 257  Q
    |||| |||||| |||||||||| | ||||  |||||||||  ||||||||||||||||  ||||||||  ||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttat 2488008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 6526167 - 6526252
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttgcaagaacttactaaaacaacttat 257  Q
    |||||||| ||||||||||||| |||| |||||  || ||||||  ||||||||| ||||||  ||||||||  ||||||||||||    
T  6526167 ggcctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaacaacttat 6526252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 41589724 - 41589643
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa 271  Q
    |||||||||||| |||  |||||||||  || |||||||||||   ||||||||  ||||||||||||  ||||||||||||    
T  41589724 ttatttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataacaattttcaaaa 41589643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 2364389 - 2364441
Alignment:
Q  187 gacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaaga 238  Q
    ||||||||||| |||||||  |||||||||| |||||||||||||||| ||||    
T  2364389 gacttatttgaacttatcttctgacataagtacttgtgagactgtttggaaga 2364441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 315
Target Start/End: Original strand, 3536870 - 3537002
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcag 282  Q
    ||||| |||||||||||||||||  || ||||||  ||||| |||| || |  |||| ||||  ||||| |||||| || | |||| ||| | |||||||    
T  3536870 gattgtcttatttgagcttatctactggcataagctttgtgtgactattcgagagaatttacagaaacagcttatgacattgttcataaattgttttcag 3536969  T
Q  283 tttattttaataagttctctaatatatcttata 315  Q
     ||||||  |||||||||| || ||||||||||    
T  3536970 cttatttccataagttctccaagatatcttata 3537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 174 - 318
Target Start/End: Complemental strand, 54426197 - 54426053
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    ||||||| |||||| |||||||||||||||||  || ||||||| ||||||||||| |||  ||||||||  |||||| |||||| ||||||||| || |    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc 54426098  T
Q  274 ttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||  ||||||| |||||||||| ||||||  ||||||||    
T  54426097 ttttttcaagttattttcataagttctccaatatagattataaaa 54426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 21731571 - 21731716
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| ||||||  |||||||||| |||||  |||||||||| |||||||| ||||||  ||||||||  |||||| |||||  ||||||||| |||    
T  21731571 ggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaa 21731670  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||||  ||| ||| |||| ||||| |||||| |||||||||    
T  21731671 cttttttcaacttactttcataaattctccaatatagcttataaaa 21731716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 13126494 - 13126619
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| |||||| ||||||| |||||| ||  | |||||||| ||||||||||||||| |||||||||  |||||| |||||| || || ||| || |||    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T
Q  276 ttttcagtttattttaataagttctc 301  Q
    ||||||| ||||||| ||||||||||    
T  13126594 ttttcagcttattttcataagttctc 13126619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 305
Target Start/End: Complemental strand, 22030347 - 22030226
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagt 283  Q
    |||||||||||||||||| |||  |  ||||||| ||||||| || ||||  ||||||||  |||||| |||||| |||||||||||| ||||| ||||     
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcagg 22030248  T
Q  284 ttattttaataagttctctaat 305  Q
    ||||||| ||||||||||||||    
T  22030247 ttattttcataagttctctaat 22030226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 327
Target Start/End: Original strand, 17822779 - 17822935
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa 271  Q
    ||||||||| ||||| ||||||||||||||||||  ||||||||||  ||||||||| |||   ||||| ||  |||||| |||||| || |||||| ||    
T  17822779 aggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataa 17822878  T
Q  272 acttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
     ||||||| || ||||||| |||||||||| || ||| ||||| |||||| ||||||    
T  17822879 gctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttata 17822935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 25904150 - 25904266
Alignment:
Q  185 ttgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtt 284  Q
    ||||||||||||||||||||   |||||||| | |||||||||||||||  ||| ||||  |||||| |||||| || |||||| || |||||||||| |    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  285 tattttaataagttctc 301  Q
    |||||| ||||||||||    
T  25904250 tatttttataagttctc 25904266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 172 - 318
Target Start/End: Original strand, 39603085 - 39603230
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa 271  Q
    |||| |||| |||||| ||||||||||||| |||  ||  |||||| |||||||||||||||  ||||||||  |||||| |||||| ||||||| | ||    
T  39603085 aggcttgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataa 39603183  T
Q  272 acttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
     ||||||| |  ||||||| |||||||||| |||||| |||||||||    
T  39603184 gctttttttaagttattttcataagttctccaatataccttataaaa 39603230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 26780 - 26924
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| ||||||||||||||||   || ||||||  |||| ||||||||| | |||| |||  |||||| |||||| ||| ||||| ||     
T  26780 ggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag 26879  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    | |||||||| ||||||| |||||||||| |||||| |||||||||    
T  26880 c-tttttcagattattttcataagttctccaatatagcttataaaa 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 319
Target Start/End: Complemental strand, 29657527 - 29657393
Alignment:
Q  185 ttgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtt 284  Q
    |||||||||||||||||||||    ||| |||| |||||||| || |||  ||||||||  |||||| |||||| |||||||||||| | ||||| || |    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttcaaaagcatttttgagct 29657428  T
Q  285 tattttaataagttctctaatatatcttataaaac 319  Q
    || ||| |||| |||||||||||| ||| ||||||    
T  29657427 taatttcataacttctctaatatagcttgtaaaac 29657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 318
Target Start/End: Original strand, 53294029 - 53294174
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| ||||||||| ||||| ||||||||  |||||| ||| |||| ||||||||||  | |||| |  ||||||| |||||    |||||||||     
T  53294029 ggcctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaag 53294128  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    || ||||||| || |||| |||||||||||||||||  ||||||||    
T  53294129 ctattttcagcttgttttcataagttctctaatatagtttataaaa 53294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 315
Target Start/End: Complemental strand, 2244203 - 2244064
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| ||||||| ||||  ||| ||||||  |||||||||| || ||| ||||||||  |||| ||   |||||| |||||| |||| |||| ||||||    
T  2244203 ctgtttggattgatttatccgagtttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaactt 2244104  T
Q  276 ttttcagtttattttaataagttctctaatatatcttata 315  Q
    ||||||  ||||||| |||||||||| |||||| ||||||    
T  2244103 ttttcaccttattttcataagttctccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 27043748 - 27043811
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaa 239  Q
    ||||| ||||||||||||||||||||||||  |||||||||| |||||| |||||||| |||||    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaa 27043811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 327
Target Start/End: Original strand, 50681044 - 50681159
Alignment:
Q  213 taagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatctt 312  Q
    ||||| |||||||||||||||  ||||||||  ||||||  | ||| ||||||||| || ||||||||| |||||||| |||| ||||| |||||| |||    
T  50681044 taagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagctt 50681143  T
Q  313 ata-aaacagcttata 327  Q
    ||| ||||| ||||||    
T  50681144 atataaacaacttata 50681159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 52315121 - 52315196
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttat 257  Q
    ||||||||||||||||| ||||||  |||| ||||| |||||||| |||||| |||||||||  ||||||||||||    
T  52315121 ggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttat 52315196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 327
Target Start/End: Complemental strand, 55302408 - 55302249
Alignment:
Q  169 tataggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    ||||||||||||||||||  ||||||| |||||||||  || ||||||| ||||||| |||||    | ||||||   ||||| |||||| ||||||||     
T  55302408 tataggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcg 55302309  T
Q  269 aaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
     || |||||||||| ||||||| ||||||| || || ||| ||||| | |||||||||||    
T  55302308 taagcttttttcagcttattttcataagttttccaacatagcttatgataacagcttata 55302249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 290
Target Start/End: Complemental strand, 41336911 - 41336798
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| ||||||||||||||||| ||||||  | |||||||| ||||||||  ||| | |||||||||  |||||| |||||| || |||||| || ||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttt 41336812  T
Q  277 tttcagtttatttt 290  Q
    |||||  |||||||    
T  41336811 tttcaacttatttt 41336798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 49940085 - 49940165
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    ||||| ||||||||||||||||||||| ||  | |||||||| |||||||||||||||  ||||||||  |||||| ||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 15173227 - 15173278
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||||||||||||||| |||||||  |||||||||| |||||||||||||||    
T  15173227 ggattgacttatttgaacttatctactgacataagttttgtgagactgtttg 15173278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 55437229 - 55437146
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||||| |||||| |||||||||| ||||||  || ||||||| |||||| | |||||| |||||||||  |||||||||||||    
T  55437229 cctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttatg 55437146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 25332891 - 25332803
Alignment:
Q  212 ataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttct 300  Q
    |||||| |||||||||| ||||  ||||||| | |||||||||||||||| | |||| ||  | ||||||| ||||||| |||||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataagttct 25332803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 318
Target Start/End: Complemental strand, 29388768 - 29388624
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    ||||||| || ||||||||||||| |||||||  | |||||||| |||| ||| ||||||  ||||||||| ||| ||  ||||| ||||||| | |  |    
T  29388768 gcctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgc 29388669  T
Q  274 ttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    | ||||||  ||||||| |||| ||||| | |||| |||||||||    
T  29388668 tcttttcaacttattttcataaattctccagtatagcttataaaa 29388624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 39691064 - 39691124
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||||||| | ||||||||||||||||||||||  |  ||||||| |||||||||||||||    
T  39691064 ggcctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttg 39691124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 44798035 - 44797975
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||||||| |||||| || |||| |||||||||  |||||||||| |||||||||||||||    
T  44798035 ggcctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtttg 44797975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 8705093 - 8705026
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    ||||| |||||| || ||||||||||||||  |||||||||| ||||||||||| |||  ||||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaactta 8705026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 1017174 - 1017112
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaactta 243  Q
    ||||||||||||||||||| ||||  ||||||||   |||||||||||||||| |||||||||    
T  1017174 ggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaactta 1017112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 33534096 - 33534138
Alignment:
Q  185 ttgacttatttgagcttatctcgtgacataagt-cttgtgaga 226  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  33534096 ttgacttatttgagcttatctagtgacataagtacttgtgaga 33534138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Original strand, 42403938 - 42403988
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtg 223  Q
    |||||||| |||||||||||||||||||||||   |||||||||| |||||    
T  42403938 ggcctgtttggattgacttatttgagcttatcaactgacataagttttgtg 42403988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 7839349 - 7839421
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||||||| ||||||||| || |||||||||  |||||||  ||||||||  ||| || |||||||||    
T  7839349 aaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaa 7839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 18628478 - 18628554
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacat-aagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||| |||||||||||||||  |||||| ||  ||||||||||||||||  ||| ||||  |||||||||||||    
T  18628478 gattgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatg 18628554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 18815178 - 18815118
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||||||| |||||| |||||||||||||| ||  |  ||||||| |||||||||||||||    
T  18815178 ggcctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttg 18815118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 182 - 318
Target Start/End: Complemental strand, 9107236 - 9107100
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||| ||||||  |||||| |  |||||| |||| | ||||||||| |||||||||||     
T  9107236 ggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaacttttttct 9107137  T
Q  282 gtttattttaataagttctctaatatatcttataaaa 318  Q
    | | ||||| |||||||||| |||||| |||| ||||    
T  9107136 gctaattttcataagttctccaatataacttacaaaa 9107100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 318
Target Start/End: Original strand, 16937800 - 16937943
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaact 274  Q
    |||||| |||||| |||||||||||||||||  |  ||||||| |||||||| |||||| |||||||||  |||||| |||||| ||| ||||| || ||    
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct 16937899  T
Q  275 tttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||| |||||||  ||||||||| |||||| | |||||||    
T  16937900 tttttcagcttattttcctaagttctccaatatagcgtataaaa 16937943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 12857624 - 12857765
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| ||||||  ||||||||||| ||||  |||| ||||| |||||| ||||||    ||||||||  ||||||||||||| ||||||||| || ||||    
T  12857624 tgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcacaaccttt 12857723  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||| ||||||| |||||||||| |||||| |||||||||    
T  12857724 tttcagcttattttcataagttctccaatatagcttataaaa 12857765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 318
Target Start/End: Original strand, 12857257 - 12857398
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttt 276  Q
    |||| ||||||  ||||||||||||||||  |||| ||||| |||||| ||| ||    ||||||||  ||||||||||||| ||||||||| || ||||    
T  12857257 tgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttt 12857356  T
Q  277 tttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||| |||||||  ||||||||| |||||| |||||||||    
T  12857357 tttcagcttatttttgtaagttctccaatatagcttataaaa 12857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 34736446 - 34736511
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||  |||||||    
T  34736446 tgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaactt 34736511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 3735119 - 3735218
Alignment:
Q  219 ttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||| ||||||||  |||||| |  |||||| |||||| |||||||||||| |||||||||| |||| || ||||||||||| |||||  ||||||||    
T  3735119 ttgtgatactgtttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctcttatataatttataaaa 3735218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 3932594 - 3932719
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| ||||||||| ||||||||||||||    |||||||  |||||||||||||||  | ||||| | |||||| ||||||  |||||||| || |||    
T  3932594 ctgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcataagctt 3932693  T
Q  276 ttttcagtttattttaataagttctc 301  Q
    ||| ||| |||||||  |||||||||    
T  3932694 tttacagcttattttcgtaagttctc 3932719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 16457935 - 16458039
Alignment:
Q  214 aagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatctta 313  Q
    |||| |||||||||||||||  ||||||||  |||||| |||||| || |||||| || || ||||||||||||||| | |||||||| ||| || || |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  314 taaaa 318  Q
    |||||    
T  16458035 taaaa 16458039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 301
Target Start/End: Complemental strand, 40426908 - 40426792
Alignment:
Q  185 ttgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtt 284  Q
    |||||||||||||||||||||  |||||||| | |||||||||||||||   |  ||||  |||||| |||||| || |||||| || ||||||| || |    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagct 40426809  T
Q  285 tattttaataagttctc 301  Q
    ||||||  |||||||||    
T  40426808 tattttcgtaagttctc 40426792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 12425716 - 12425658
Alignment:
Q  185 ttgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||||||||||||||||||||  || ||||||| |||||||||||||||  ||||||||    
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaactta 12425658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 314
Target Start/End: Original strand, 7705913 - 7706054
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||||||||||||||| |||||  |  ||||||| ||||||  || ||||  ||||||||  |||||| |||||| || ||||||        
T  7705913 ggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctg 7706012  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttat 314  Q
    |||||||| | ||||||| | |||||||| |||||| |||||    
T  7706013 cttttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 25461166 - 25461089
Alignment:
Q  253 cttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttataac 329  Q
    |||||||||||||||| |||| |||||||| ||||||| || ||||||| |||| | ||||| |||||| ||||||||    
T  25461166 cttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataac 25461089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 29815049 - 29815114
Alignment:
Q  212 ataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactttt 277  Q
    |||||| |||||||||| |||  |||||||||| ||||||||||||  |||||||||||| |||||    
T  29815049 ataagttttgtgagactatttagaagaacttacgaaaacaacttataacaattttcaaaagctttt 29815114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 6521233 - 6521125
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaac-aacttatggcaattttcaaaa 271  Q
    |||||||| ||||||||||||| ||||| | ||  ||||||| || |||||||| ||||||  ||||||||  |||||  ||||||| ||||||||| ||    
T  6521233 ggcctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaacggacttatgacaattttcacaa 6521134  T
Q  272 acttttttc 280  Q
     ||||||||    
T  6521133 gcttttttc 6521125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 9202672 - 9202718
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagact 228  Q
    ||||||||||||||||||||||||| || ||||||| |||| |||||    
T  9202672 ggattgacttatttgagcttatctcctggcataagttttgtaagact 9202718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 15015982 - 15015928
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactta 243  Q
    |||||||||||||||||  |||||||||  |||||||||||||||  ||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaactta 15015928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 32372756 - 32372686
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaact 254  Q
    |||| ||||||||  |||||||  || ||||||| ||||||||||||||| ||||||||  ||||||||||    
T  32372756 attggcttatttggccttatctactggcataagttttgtgagactgtttggaagaactttttaaaacaact 32372686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 261
Target Start/End: Original strand, 38033953 - 38034031
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaacttactaaaacaacttatggca 261  Q
    |||||||||||||||||| |||  || ||||||  | |||||||||||||| ||||| ||| ||||||| |||||||||    
T  38033953 attgacttatttgagcttttctactggcataagcacctgtgagactgtttggaagaagttattaaaacagcttatggca 38034031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 301
Target Start/End: Complemental strand, 11700318 - 11700190
Alignment:
Q  172 aggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaa 271  Q
    |||| |||| |||||  ||||||||||||||||   || ||||||| ||||||||||||||   ||||||||   |||||||||||| || | |||| ||    
T  11700318 aggcatgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataa 11700219  T
Q  272 acttttttcagtttattttaataagttctc 301  Q
    | || |||||  ||||||| ||||||||||    
T  11700218 a-ttgtttcatcttattttcataagttctc 11700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 25461642 - 25461707
Alignment:
Q  253 cttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||||||||||| || ||||  |||  |||||||||||||||||| |||| | |||||||||    
T  25461642 cttatggcaattttcataagctttgatcaacttattttaataagttctccaatagagcttataaaa 25461707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 40438942 - 40439038
Alignment:
Q  246 aaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttataacctacagaaaatca 342  Q
    |||||||||| || || |||||| || |||||| || |||||||| ||| |||||| || |||  | || ||||||||||||||||||||||||||||    
T  40438942 aaaacaacttgtgacatttttcataagcttttt-caatttattttcatatgttctccaagataggtcatgaaaacagcttataacctacagaaaatca 40439038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 7674793 - 7674717
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||||| |||||||||||||||||    || ||||| ||||||||||| ||| |||||||||   ||||||||||||    
T  7674793 ggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatg 7674717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 35299920 - 35299888
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatct 205  Q
    |||||||| ||||||||||||||||||||||||    
T  35299920 ggcctgtttggattgacttatttgagcttatct 35299888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 36797011 - 36797139
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaac-ttatggcaattttcaaaaa 272  Q
    ||||||| |||||||||||| ||||||| |||  ||  || ||| || ||||| |||||   ||||||||  |||||||| || || ||||||||| ||     
T  36797011 gcctgtttggattgacttatctgagcttctctactggtattagttttatgagaatgttttggagaacttataaaaacaactttctgacaattttcataag 36797110  T
Q  273 cttttttcagtttattttaataagttctc 301  Q
    |||||||| | |||||||| |||||||||    
T  36797111 cttttttcggcttattttagtaagttctc 36797139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 39594958 - 39594902
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||| ||||||||||||||||||||||||   ||||||||| |||| ||| ||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttg 39594902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 41419470 - 41419414
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||| ||||||||||||||||||| ||||  |||||||| | |||||||| ||||||    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttg 41419414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 41534589 - 41534533
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttg 233  Q
    |||| ||||||||||||||||||| ||||  |||||||| | |||||||| ||||||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttg 41534533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 192 - 327
Target Start/End: Complemental strand, 30444029 - 30443893
Alignment:
Q  192 atttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatttta 291  Q
    ||||||||||||||  || ||||| | | |||||||||||||  ||| ||||  |||||| |||||| ||||||||| || |||||||||| |||||||     
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  292 ataagttctctaatatatcttat-aaaacagcttata 327  Q
    |||||||||| ||||||  |||| |||||||||||||    
T  30443929 ataagttctccaatatagtttataaaaacagcttata 30443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 25447163 - 25447227
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaac 240  Q
    ||||| ||||||||||||||||| ||||||  |||||||||| ||||||||||||||||||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttgcaagaac 25447227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 281
Target Start/End: Original strand, 31365112 - 31365211
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    |||||| |||||||||||||||||  || ||||||| |||||||||||||||  ||||||||  ||| || |||||| ||||||||| || |||||||||    
T  31365112 ggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttca 31365211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 327
Target Start/End: Original strand, 18405763 - 18405901
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattt 289  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||  ||||||  | | | || |||||| || ||||||  || ||| ||    
T  18405763 ttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatt 18405862  T
Q  290 taataagttctctaatatatcttat-aaaacagcttata 327  Q
    | |||||||||| || ||| ||||| |||||| ||||||    
T  18405863 tcataagttctccaagatagcttatgaaaacaacttata 18405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 37795741 - 37795667
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    |||||||||||||| ||||||||   ||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  37795741 ggattgacttatttaagcttatccactgacataagtcttgtaagactgtttggaaggacttattaaaacaactta 37795667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 318
Target Start/End: Complemental strand, 39980881 - 39980739
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaactt 275  Q
    ||||| |||||| ||| |||||||||||||  |  ||||||| ||||||||||||||   ||||||||  |||||| |||||| |   ||||| || |||    
T  39980881 ctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagctt 39980782  T
Q  276 ttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||  ||||||| |||||||||| |||||| |||||||||    
T  39980781 ttttcaacttattttcataagttctccaatatagcttataaaa 39980739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 20170630 - 20170698
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaactt 242  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||| | |||||||||||||  |||||||    
T  20170630 gcctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttgttagaactt 20170698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 9832680 - 9832797
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcag 282  Q
    ||||||||||||||||||||| |  |||||||||| |||| | ||||||||  |||||||   |||||| |||||| |  |||||| ||||||||||||     
T  9832680 gattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaa 9832779  T
Q  283 tttattttaataagttct 300  Q
     |||| || |||||||||    
T  9832780 cttatatttataagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 13715488 - 13715621
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaac 273  Q
    ||||||| |||| | ||||||||| |||||||  |  |||| || |||||||||||||||  ||||||| |||||||| |||||| ||| ||||| || |    
T  13715488 gcctgttcggatcggcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagc 13715587  T
Q  274 ttttttcagtttattttaataagttctctaatat 307  Q
     |||||||  ||||||| ||||||| || |||||    
T  13715588 atttttcaacttattttcataagttgtccaatat 13715621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 16072958 - 16073007
Alignment:
Q  175 cctgttaggattgacttatttgagcttatctcgtgacataagtcttgtga 224  Q
    |||||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  16072958 cctgtttggattgacttatttgagcttatctaatgacataagttttgtga 16073007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 46031134 - 46031017
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagt 283  Q
    |||| |||||||||| ||||||  ||  |||||| || |||||||||||   ||||||||| |||||| | |||| || | |||| || || |||||||     
T  46031134 attggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagc 46031035  T
Q  284 ttattttaataagttctc 301  Q
    ||||||||||||||||||    
T  46031034 ttattttaataagttctc 46031017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 2923629 - 2923549
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    |||| ||||||||||||| ||||||||||  |||||||||| ||||  |||||||||| |||||||||   ||||||||||    
T  2923629 tgttcggattgacttattcgagcttatctattgacataagtacttgaaagactgtttggaagaacttatagaaacaactta 2923549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 260 - 315
Target Start/End: Original strand, 35959458 - 35959513
Alignment:
Q  260 caattttcaaaaacttttttcagtttattttaataagttctctaatatatcttata 315  Q
    |||||||||||| |||||||||| ||||||| | || |||||||||||| ||||||    
T  35959458 caattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttata 35959513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 318
Target Start/End: Complemental strand, 36189642 - 36189576
Alignment:
Q  251 aacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    |||||||| ||||||||| || ||||| |  ||||||||| |||||||||| ||||||||||||||||    
T  36189642 aacttatgacaattttcacaagcttttatg-gtttattttcataagttctccaatatatcttataaaa 36189576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 1395783 - 1395710
Alignment:
Q  184 attgacttatttgagcttatctcgtgacataag-tcttgtgagactgtttgcaagaacttactaaaacaactta 256  Q
    ||||||||||||||||||||||  |||| ||||  |||| |||||||||||  ||| ||||| |||||||||||    
T  1395783 attgacttatttgagcttatcttatgacgtaagcacttgcgagactgtttgagagagcttacaaaaacaactta 1395710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 42747698 - 42747779
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaactt 255  Q
    ||||||| || |||||||||||||| ||||||  |  ||||||| ||||||||||||||   ||||||||  ||||||||||    
T  42747698 gcctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactt 42747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 43062764 - 43062711
Alignment:
Q  255 tatggcaattttcaaaaacttttttcagtttattttaataagttctctaatata 308  Q
    |||||||||||||| || |||||||||| || |||| |||||||||| ||||||    
T  43062764 tatggcaattttcacaagcttttttcagcttcttttcataagttctccaatata 43062711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 24085262 - 24085398
Alignment:
Q  182 ggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttca 281  Q
    |||||| |||||||||||||||||   | ||||||| ||||||||||| ||   ||||||||  |||||| ||||||| | | |||| |  || ||||||    
T  24085262 ggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttca 24085361  T
Q  282 gtttattttaataagttctctaatatatcttataaaa 318  Q
    | ||||||| | |||||||| || ||| |||| ||||    
T  24085362 gcttattttcacaagttctccaagatagcttacaaaa 24085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 24684741 - 24684829
Alignment:
Q  177 tgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattt 265  Q
    |||| ||||| ||||||||||||||||||  || ||||||| || ||||||  ||||   |||||||  ||||||||||||| ||||||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgacaattt 24684829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 26542681 - 26542606
Alignment:
Q  183 gattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    |||||||||||||||  ||||||  | |||||||| ||||| |||||||||| |||| |||||| ||||||||||||    
T  26542681 gattgacttatttgat-ttatctactcacataagtacttgtaagactgtttggaagagcttactgaaacaacttatg 26542606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 28283530 - 28283602
Alignment:
Q  189 cttatttgagcttatctcgtgacataagt-cttgtgagactgtttgcaagaacttactaaaacaacttatggc 260  Q
    ||||||||||||||| || |||||| ||  |||||||||||||||| |||||||||  |||| | ||||||||    
T  28283530 cttatttgagcttatgtcatgacattagcacttgtgagactgtttgaaagaacttatgaaaatagcttatggc 28283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 46778122 - 46778222
Alignment:
Q  189 cttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttatt 288  Q
    ||||||||||||||| | ||| ||||| | |||||| || |||||  ||||||||  ||||||||||||| || |||||| ||  ||| ||||| |||||    
T  46778122 cttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagcttatt 46778221  T
Q  289 t 289  Q
    |    
T  46778222 t 46778222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 51929896 - 51929864
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatct 205  Q
    |||||||| ||||||||||||||||||||||||    
T  51929896 ggcctgtttggattgacttatttgagcttatct 51929864  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 848143 - 848022
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||||||||||||   | ||||||| ||||||||||||||| |||||||||  |||||  |||||| || |||||  ||     
T  848143 ggcctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaag 848045  T
Q  273 cttttttcagtttattttaataa 295  Q
    |||||||||| ||||||| ||||    
T  848044 cttttttcagcttattttcataa 848022  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 316
Target Start/End: Original strand, 35070569 - 35070708
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaa 272  Q
    |||||||| |||||| |||||||||||||| ||  || || ||||||||||||||    ||  ||||||||| |||||| |||||| ||||||||| ||     
T  35070569 ggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagac----tgagagaacttacgaaaacagcttatgacaattttcacaag 35070664  T
Q  273 cttttttcagtttattttaataagttctctaatatatcttataa 316  Q
    |||||||  | || |||| |||||||||| || ||| |||||||    
T  35070665 cttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 4163313 - 4163215
Alignment:
Q  168 atataggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaatttt 266  Q
    |||||||| |||| |||||| |||||||||||||||||  || ||||||| ||  ||||||||| |  ||||| ||  ||||||||||||| |||||||    
T  4163313 atataggcatgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4163215  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 4224934 - 4224836
Alignment:
Q  168 atataggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaatttt 266  Q
    |||||||| |||| |||||| |||||||||||||||||  || ||||||| ||  ||||||||| |  ||||| ||  ||||||||||||| |||||||    
T  4224934 atataggcatgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttt 4224836  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 318
Target Start/End: Complemental strand, 8201306 - 8201243
Alignment:
Q  255 tatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||||||||||| |||| || | |||||||| |||||||||| || ||| |||||||||    
T  8201306 tatggcaattttcaaaatctttattaaatttattttcataagttctccaacataacttataaaa 8201243  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 30926674 - 30926579
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    |||||||| || ||| ||||||||||||||| |  || ||||| | |  |||||||||||| |||||||||  |||||| |||||| |||||||||    
T  30926674 ggcctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttca 30926579  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 281766 - 281824
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttg 233  Q
    ||||| ||||||||||| ||||| |||| | ||||||||||| ||||||||||||||||    
T  281766 ctgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttg 281824  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 21405072 - 21405122
Alignment:
Q  176 ctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgaga 226  Q
    ||||| |||||||||||||||||||||| |  |||||||||| ||||||||    
T  21405072 ctgtttggattgacttatttgagcttatatactgacataagttttgtgaga 21405122  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 35069527 - 35069585
Alignment:
Q  173 ggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtt 231  Q
    |||||||| | |||| |||||||||||||||||  |||||||||| |||| ||||||||    
T  35069527 ggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 103584 - 103500
Alignment:
Q  174 gcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatg 258  Q
    ||||||| |||||||||||||||||||||| |  |  ||||||| ||||| || |||| |  ||||||||| |||||| ||||||    
T  103584 gcctgtttggattgacttatttgagcttatatattagcataagttttgtgtgattgttcgagagaacttacaaaaacagcttatg 103500  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Original strand, 160968 - 161012
Alignment:
Q  274 ttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||| ||||||| ||||||||||||||||| |||| ||||    
T  160968 ttttttcagcttattttcataagttctctaatatagcttacaaaa 161012  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 10616683 - 10616782
Alignment:
Q  227 ctgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaacagcttat 326  Q
    |||||||  ||||||||  |||||| |||||| || | |||| || || ||||||||||||||| |||| | |||||| ||| |||| ||||||||||||    
T  10616683 ctgtttgggagaacttatcaaaacaccttatgaca-tgttcataagctgttttcagtttatttttataaatcctctaagataacttaaaaaacagcttat 10616781  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 29754063 - 29754159
Alignment:
Q  222 tgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatatatcttataaaa 318  Q
    ||||||||||||  ||||||||| |||||| ||||||   ||||||| | | | ||||||  ||||||| |||||||||| ||||||  ||||||||    
T  29754063 tgagactgtttgggagaacttacgaaaacagcttatgcatattttcatagaatgttttcaacttatttttataagttctccaatatagtttataaaa 29754159  T

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Target: scaffold0221 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 327
Target Start/End: Complemental strand, 22390 - 22231
Alignment:
Q  169 tataggcctgttaggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttca 268  Q
    ||||||||||||||||||  ||||||| |||||||||  || ||||||| ||||||| |||||    | ||||||   ||||| |||||| ||||||||     
T  22390 tataggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcg 22291  T
Q  269 aaaacttttttcagtttattttaataagttctctaatatatcttat-aaaacagcttata 327  Q
     || |||||||||| ||||||| ||||||| || || ||| ||||| | |||||||||||    
T  22290 taagcttttttcagcttattttcataagttttccaacatagcttatgataacagcttata 22231  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 52054 - 51997
Alignment:
Q  251 aacttatggcaattttcaaaaacttttttcagtttattttaataagttctctaatata 308  Q
    ||||||||  ||||||||||| |||||||||  ||||||| ||||||||| |||||||    
T  52054 aacttatgataattttcaaaagcttttttcaacttattttcataagttctttaatata 51997  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 24759 - 24662
Alignment:
Q  190 ttatttgagcttatctcgtgacataagtcttgtgagactgtttgcaagaacttactaaaacaacttatggcaattttcaaaaacttttttcagtttat 287  Q
    |||||||||| |||||  || |||| || |||||||||||||||  ||||||||  |||||| |||||| || | ||||||| ||  |||||||||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacattcttcaaaagctgctttcagtttat 24662  T

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