View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15349_low_23 (Length: 211)
Name: NF15349_low_23
Description: NF15349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15349_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 37833937 - 37833759
Alignment:
| Q |
18 |
cttctccacacatccatggagtttgaccttgaaaaccctcttgaatatttccatgaccttcctaattctcaagatgtttcttcacttttcctcattgaat |
117 |
Q |
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| T |
37833937 |
cttctccacacatccatggagtttgaccttgaaaaccctcttgaatatttccatgaccttcctaattctcaagatgtttcttcacttttcctcattgaat |
37833838 |
T |
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| Q |
118 |
ctgaccacatccctccactaaattactttcaaaacctcaaatcaaatgagtttgatgcctcagttagaactgatttcat |
196 |
Q |
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| T |
37833837 |
ctgaccacatccctccactaaattactttcaaaacctcaaatcaaatgagtttgatgcctcagttagaactgatttcat |
37833759 |
T |
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