View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15351_high_10 (Length: 445)

Name: NF15351_high_10
Description: NF15351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15351_high_10
NF15351_high_10
[»] chr8 (49 HSPs)
chr8 (19-340)||(10885535-10885856)
chr8 (382-435)||(17920954-17921007)
chr8 (338-435)||(39698768-39698865)
chr8 (382-435)||(40362433-40362486)
chr8 (382-441)||(39765955-39766014)
chr8 (385-435)||(43084729-43084779)
chr8 (339-435)||(396315-396412)
chr8 (382-435)||(6374412-6374465)
chr8 (382-435)||(31693723-31693776)
chr8 (335-435)||(39463209-39463310)
chr8 (382-435)||(40228572-40228625)
chr8 (346-435)||(15160548-15160638)
chr8 (346-435)||(4989440-4989529)
chr8 (382-435)||(6116107-6116160)
chr8 (339-435)||(37559635-37559732)
chr8 (339-435)||(4760660-4760756)
chr8 (385-435)||(514875-514925)
chr8 (382-432)||(9812171-9812221)
chr8 (336-437)||(43724333-43724434)
chr8 (339-435)||(9880603-9880699)
chr8 (382-432)||(43448714-43448764)
chr8 (386-436)||(43561341-43561390)
chr8 (389-435)||(43974893-43974939)
chr8 (382-432)||(44713532-44713582)
chr8 (382-435)||(7839456-7839509)
chr8 (337-426)||(14234329-14234418)
chr8 (382-435)||(29025848-29025901)
chr8 (339-435)||(15227522-15227618)
chr8 (387-435)||(36921360-36921408)
chr8 (338-373)||(14541911-14541946)
chr8 (339-435)||(35356263-35356358)
chr8 (335-373)||(4760467-4760505)
chr8 (382-435)||(9304735-9304788)
chr8 (382-435)||(17655906-17655958)
chr8 (386-427)||(29312303-29312344)
chr8 (382-435)||(45358996-45359049)
chr8 (385-432)||(43594830-43594877)
chr8 (339-373)||(1774224-1774258)
chr8 (389-435)||(5295508-5295554)
chr8 (385-431)||(12339712-12339758)
chr8 (339-368)||(7129493-7129522)
chr8 (390-435)||(19438242-19438287)
chr8 (392-429)||(31234047-31234084)
chr8 (390-435)||(31899350-31899395)
chr8 (336-373)||(35052422-35052459)
chr8 (337-373)||(11165480-11165516)
chr8 (387-435)||(40400078-40400126)
chr8 (383-435)||(40400441-40400493)
chr8 (403-435)||(41679338-41679370)
[»] chr3 (61 HSPs)
chr3 (346-435)||(50038270-50038360)
chr3 (339-435)||(3152905-3153001)
chr3 (339-435)||(19115342-19115438)
chr3 (339-435)||(38016330-38016426)
chr3 (339-432)||(33194133-33194226)
chr3 (382-435)||(53200779-53200832)
chr3 (385-435)||(9189534-9189584)
chr3 (333-435)||(45213821-45213922)
chr3 (338-435)||(50646209-50646307)
chr3 (382-435)||(32492280-32492333)
chr3 (382-435)||(39356883-39356936)
chr3 (335-435)||(51397960-51398061)
chr3 (339-435)||(30431075-30431171)
chr3 (383-435)||(36460805-36460857)
chr3 (346-435)||(4758952-4759042)
chr3 (346-435)||(42571628-42571718)
chr3 (382-432)||(47137961-47138011)
chr3 (338-435)||(50088415-50088513)
chr3 (382-435)||(2458005-2458058)
chr3 (382-435)||(11019925-11019978)
chr3 (382-435)||(11393543-11393596)
chr3 (382-435)||(22857088-22857141)
chr3 (382-435)||(30426423-30426476)
chr3 (382-435)||(41850388-41850441)
chr3 (382-435)||(44676219-44676272)
chr3 (382-435)||(47895443-47895496)
chr3 (382-435)||(48901718-48901771)
chr3 (382-435)||(48903284-48903337)
chr3 (385-435)||(33024399-33024449)
chr3 (389-435)||(36729909-36729955)
chr3 (332-435)||(42886697-42886802)
chr3 (339-435)||(23208390-23208484)
chr3 (382-435)||(30315307-30315360)
chr3 (382-435)||(36844841-36844894)
chr3 (383-432)||(38140949-38140998)
chr3 (339-432)||(38363740-38363833)
chr3 (382-435)||(42071983-42072036)
chr3 (390-435)||(52654310-52654355)
chr3 (337-373)||(36461012-36461048)
chr3 (346-435)||(4392157-4392247)
chr3 (383-433)||(8817139-8817189)
chr3 (382-432)||(19373584-19373634)
chr3 (382-435)||(31583533-31583586)
chr3 (382-435)||(35557857-35557910)
chr3 (382-435)||(47823550-47823603)
chr3 (382-419)||(51058267-51058304)
chr3 (383-435)||(7230995-7231047)
chr3 (382-430)||(51324143-51324191)
chr3 (337-373)||(54933113-54933149)
chr3 (382-435)||(30934908-30934958)
chr3 (336-366)||(27067812-27067842)
chr3 (389-435)||(40487833-40487879)
chr3 (339-372)||(20512406-20512439)
chr3 (338-371)||(27483349-27483382)
chr3 (336-373)||(36729969-36730006)
chr3 (339-419)||(42939923-42940004)
chr3 (339-372)||(43169289-43169322)
chr3 (336-373)||(51398217-51398254)
chr3 (337-373)||(4476272-4476308)
chr3 (383-435)||(20028338-20028390)
chr3 (337-373)||(42740429-42740465)
[»] chr2 (72 HSPs)
chr2 (333-435)||(32228113-32228215)
chr2 (339-435)||(5717468-5717564)
chr2 (339-435)||(16792439-16792534)
chr2 (382-435)||(17703017-17703070)
chr2 (382-435)||(18719534-18719587)
chr2 (382-435)||(29808810-29808863)
chr2 (382-435)||(45301763-45301816)
chr2 (382-429)||(38926604-38926651)
chr2 (382-432)||(28072565-28072615)
chr2 (382-435)||(441333-441386)
chr2 (382-435)||(4469499-4469552)
chr2 (382-435)||(6220506-6220559)
chr2 (382-435)||(14833837-14833890)
chr2 (382-435)||(18579165-18579218)
chr2 (335-435)||(29396782-29396883)
chr2 (382-435)||(29411694-29411747)
chr2 (382-435)||(43427389-43427442)
chr2 (382-435)||(43971502-43971555)
chr2 (336-429)||(11188600-11188692)
chr2 (338-435)||(4132977-4133075)
chr2 (389-435)||(16463134-16463180)
chr2 (382-435)||(12342091-12342144)
chr2 (339-435)||(22620436-22620533)
chr2 (382-435)||(25383586-25383639)
chr2 (382-423)||(37038880-37038921)
chr2 (339-435)||(17695927-17696023)
chr2 (339-435)||(34546433-34546529)
chr2 (333-432)||(36177924-36178024)
chr2 (382-432)||(4051809-4051859)
chr2 (382-432)||(12566085-12566135)
chr2 (382-432)||(27986034-27986083)
chr2 (382-432)||(35799201-35799251)
chr2 (382-435)||(8540036-8540089)
chr2 (382-435)||(13561992-13562045)
chr2 (390-435)||(27964472-27964517)
chr2 (382-431)||(35046516-35046565)
chr2 (338-435)||(7028914-7029010)
chr2 (387-435)||(7644649-7644697)
chr2 (387-435)||(40608706-40608753)
chr2 (391-435)||(45082002-45082046)
chr2 (336-435)||(7874746-7874844)
chr2 (339-426)||(9366230-9366317)
chr2 (384-435)||(45423618-45423669)
chr2 (389-435)||(9391660-9391706)
chr2 (382-432)||(10195572-10195622)
chr2 (382-432)||(12394026-12394076)
chr2 (385-419)||(34035865-34035899)
chr2 (382-435)||(16807619-16807672)
chr2 (382-435)||(16846900-16846953)
chr2 (382-435)||(33482331-33482384)
chr2 (395-432)||(42753756-42753793)
chr2 (337-373)||(25383395-25383431)
chr2 (389-432)||(14285943-14285986)
chr2 (338-373)||(14378387-14378422)
chr2 (384-431)||(30855105-30855152)
chr2 (338-373)||(37724200-37724235)
chr2 (338-373)||(40987193-40987228)
chr2 (382-432)||(777768-777818)
chr2 (339-373)||(4766129-4766163)
chr2 (339-373)||(16807429-16807463)
chr2 (339-373)||(16846710-16846744)
chr2 (389-435)||(19164362-19164408)
chr2 (339-373)||(25332778-25332812)
chr2 (382-440)||(36106496-36106554)
chr2 (382-435)||(4288813-4288866)
chr2 (382-435)||(4658335-4658388)
chr2 (382-435)||(7042288-7042341)
chr2 (338-371)||(16463191-16463224)
chr2 (382-435)||(36685842-36685895)
chr2 (399-435)||(1423206-1423242)
chr2 (337-373)||(42743233-42743269)
chr2 (337-373)||(42970095-42970131)
[»] chr1 (71 HSPs)
chr1 (337-435)||(10842733-10842831)
chr1 (385-435)||(25487089-25487139)
chr1 (337-435)||(27720911-27721009)
chr1 (338-435)||(50249263-50249361)
chr1 (382-435)||(15823032-15823085)
chr1 (338-435)||(44557144-44557241)
chr1 (337-435)||(32807038-32807137)
chr1 (382-432)||(15573605-15573655)
chr1 (338-435)||(5463529-5463626)
chr1 (382-435)||(12591182-12591235)
chr1 (382-435)||(13408365-13408418)
chr1 (382-435)||(26352181-26352234)
chr1 (382-435)||(29567894-29567947)
chr1 (382-435)||(44258607-44258660)
chr1 (347-432)||(46045936-46046021)
chr1 (383-435)||(26595169-26595221)
chr1 (338-433)||(48025356-48025452)
chr1 (337-435)||(34032180-34032279)
chr1 (339-435)||(34047335-34047433)
chr1 (382-432)||(1740744-1740794)
chr1 (337-435)||(2610930-2611028)
chr1 (389-435)||(40717396-40717442)
chr1 (389-435)||(50094234-50094280)
chr1 (382-435)||(9915441-9915494)
chr1 (339-432)||(27208944-27209037)
chr1 (382-435)||(35848033-35848086)
chr1 (382-435)||(44108597-44108650)
chr1 (382-430)||(30292938-30292986)
chr1 (387-435)||(46286918-46286966)
chr1 (339-432)||(46554754-46554846)
chr1 (346-432)||(14373516-14373603)
chr1 (390-435)||(14593420-14593465)
chr1 (382-435)||(16757294-16757347)
chr1 (382-435)||(26755218-26755271)
chr1 (382-435)||(31491870-31491923)
chr1 (382-435)||(38531397-38531450)
chr1 (382-435)||(48009008-48009061)
chr1 (382-435)||(49468811-49468864)
chr1 (339-435)||(24483343-24483439)
chr1 (385-432)||(24884416-24884463)
chr1 (392-435)||(34110535-34110578)
chr1 (382-425)||(38947653-38947696)
chr1 (339-373)||(28200134-28200168)
chr1 (385-435)||(33622465-33622515)
chr1 (335-373)||(49894756-49894794)
chr1 (383-432)||(49900860-49900910)
chr1 (382-435)||(7191307-7191360)
chr1 (336-373)||(17919985-17920022)
chr1 (382-435)||(18794642-18794694)
chr1 (390-435)||(25151821-25151866)
chr1 (382-435)||(31798587-31798640)
chr1 (382-435)||(52024334-52024387)
chr1 (390-439)||(52125232-52125281)
chr1 (382-435)||(52706880-52706932)
chr1 (383-435)||(39125647-39125699)
chr1 (334-373)||(24040931-24040970)
chr1 (340-432)||(43358303-43358397)
chr1 (331-373)||(2459212-2459254)
chr1 (383-435)||(7214136-7214185)
chr1 (335-373)||(12851938-12851976)
chr1 (389-435)||(24611620-24611666)
chr1 (382-432)||(39477810-39477860)
chr1 (339-373)||(44024499-44024533)
chr1 (339-372)||(34032001-34032034)
chr1 (383-435)||(49426515-49426565)
chr1 (336-373)||(50094178-50094215)
chr1 (399-435)||(43759347-43759383)
chr1 (339-371)||(45749411-45749443)
chr1 (384-432)||(46271420-46271468)
chr1 (403-435)||(49402971-49403003)
chr1 (383-435)||(51244937-51244988)
[»] chr7 (67 HSPs)
chr7 (346-435)||(715963-716052)
chr7 (336-435)||(44567141-44567241)
chr7 (338-435)||(45948730-45948829)
chr7 (336-435)||(10599165-10599264)
chr7 (339-435)||(22297952-22298047)
chr7 (382-432)||(27935765-27935815)
chr7 (382-435)||(19105101-19105154)
chr7 (382-435)||(27947601-27947654)
chr7 (339-435)||(1741946-1742042)
chr7 (382-434)||(48843550-48843602)
chr7 (346-435)||(2296999-2297089)
chr7 (339-435)||(12977786-12977883)
chr7 (382-435)||(13405227-13405280)
chr7 (382-435)||(24680126-24680179)
chr7 (382-435)||(42880034-42880087)
chr7 (332-435)||(18528579-18528681)
chr7 (385-435)||(10476137-10476187)
chr7 (389-435)||(37490789-37490835)
chr7 (336-434)||(39557274-39557372)
chr7 (382-424)||(45933695-45933737)
chr7 (382-435)||(8603973-8604026)
chr7 (339-433)||(18292288-18292384)
chr7 (382-435)||(29531035-29531088)
chr7 (382-435)||(34274792-34274845)
chr7 (382-435)||(42285906-42285959)
chr7 (389-433)||(18270582-18270626)
chr7 (339-430)||(40339413-40339505)
chr7 (384-432)||(40927163-40927211)
chr7 (382-429)||(32501855-32501902)
chr7 (385-435)||(25440873-25440923)
chr7 (385-435)||(30312459-30312509)
chr7 (389-435)||(37502324-37502370)
chr7 (389-435)||(48684728-48684774)
chr7 (382-431)||(6747225-6747274)
chr7 (382-435)||(23935420-23935473)
chr7 (382-435)||(24133230-24133283)
chr7 (339-435)||(31929960-31930057)
chr7 (382-435)||(33939834-33939887)
chr7 (346-432)||(34012124-34012209)
chr7 (382-435)||(40753528-40753581)
chr7 (385-430)||(44453136-44453181)
chr7 (332-373)||(45933492-45933533)
chr7 (338-373)||(30833257-30833292)
chr7 (382-432)||(24780409-24780459)
chr7 (389-435)||(28289220-28289266)
chr7 (341-435)||(41137685-41137779)
chr7 (335-373)||(44453340-44453378)
chr7 (386-435)||(6563514-6563563)
chr7 (382-435)||(31418613-31418666)
chr7 (382-435)||(36807933-36807986)
chr7 (389-433)||(21752213-21752257)
chr7 (382-432)||(1031153-1031203)
chr7 (339-373)||(6522026-6522060)
chr7 (339-373)||(18733408-18733442)
chr7 (382-432)||(35777817-35777867)
chr7 (382-427)||(7899927-7899972)
chr7 (342-371)||(16564716-16564745)
chr7 (342-371)||(16600917-16600946)
chr7 (336-373)||(19906621-19906658)
chr7 (338-371)||(23935630-23935663)
chr7 (339-372)||(30833007-30833040)
chr7 (336-373)||(32345743-32345780)
chr7 (382-435)||(37815722-37815775)
chr7 (382-427)||(42753706-42753751)
chr7 (382-435)||(45499927-45499980)
chr7 (389-429)||(29636333-29636373)
chr7 (337-373)||(42259459-42259495)
[»] chr6 (31 HSPs)
chr6 (338-435)||(24163816-24163913)
chr6 (338-431)||(9940601-9940695)
chr6 (382-435)||(18737192-18737245)
chr6 (382-435)||(234032-234085)
chr6 (382-435)||(4850597-4850650)
chr6 (383-432)||(13503953-13504002)
chr6 (382-435)||(29399944-29399997)
chr6 (382-435)||(31233727-31233780)
chr6 (385-437)||(12588527-12588579)
chr6 (338-435)||(32429239-32429335)
chr6 (349-435)||(10520741-10520827)
chr6 (389-435)||(19674985-19675031)
chr6 (344-430)||(577022-577107)
chr6 (382-435)||(21272204-21272257)
chr6 (337-372)||(29713316-29713351)
chr6 (389-435)||(8030647-8030693)
chr6 (390-432)||(12063615-12063657)
chr6 (385-435)||(24556030-24556080)
chr6 (389-435)||(29713508-29713554)
chr6 (382-432)||(31443551-31443601)
chr6 (336-432)||(10540613-10540710)
chr6 (382-431)||(23259431-23259480)
chr6 (382-435)||(32193700-32193753)
chr6 (389-425)||(12322996-12323032)
chr6 (339-434)||(19600376-19600471)
chr6 (338-372)||(34439319-34439353)
chr6 (401-435)||(34513705-34513739)
chr6 (382-435)||(17828294-17828347)
chr6 (383-435)||(1502841-1502893)
chr6 (399-435)||(3988845-3988881)
chr6 (339-371)||(26669262-26669294)
[»] chr5 (55 HSPs)
chr5 (346-435)||(7316989-7317079)
chr5 (382-435)||(26660753-26660806)
chr5 (382-435)||(26932346-26932399)
chr5 (382-435)||(39566181-39566234)
chr5 (338-435)||(10345034-10345133)
chr5 (385-435)||(27797782-27797832)
chr5 (338-435)||(3306111-3306208)
chr5 (382-435)||(6518974-6519027)
chr5 (382-435)||(7579971-7580024)
chr5 (383-432)||(15167115-15167164)
chr5 (339-420)||(21375768-21375849)
chr5 (382-435)||(42104165-42104218)
chr5 (346-427)||(42978176-42978257)
chr5 (385-435)||(4630866-4630916)
chr5 (389-435)||(14620596-14620642)
chr5 (389-435)||(35766002-35766048)
chr5 (382-435)||(39504720-39504774)
chr5 (382-432)||(43584482-43584532)
chr5 (382-435)||(2729888-2729941)
chr5 (382-435)||(3025033-3025086)
chr5 (382-435)||(13761555-13761608)
chr5 (382-435)||(21319412-21319465)
chr5 (383-431)||(38362243-38362291)
chr5 (331-373)||(26660961-26661003)
chr5 (331-373)||(26932554-26932596)
chr5 (345-435)||(36073732-36073822)
chr5 (385-435)||(36164888-36164938)
chr5 (382-435)||(9066525-9066578)
chr5 (382-435)||(24280991-24281044)
chr5 (382-435)||(24381168-24381221)
chr5 (382-435)||(34446129-34446182)
chr5 (385-432)||(40776681-40776728)
chr5 (382-432)||(7721094-7721144)
chr5 (385-431)||(25768538-25768584)
chr5 (389-435)||(39729964-39730010)
chr5 (382-435)||(25362902-25362955)
chr5 (382-435)||(27600397-27600450)
chr5 (382-427)||(31041925-31041970)
chr5 (382-435)||(38369871-38369923)
chr5 (389-429)||(8336517-8336557)
chr5 (337-373)||(34972560-34972596)
chr5 (336-372)||(39504933-39504969)
chr5 (382-432)||(34208999-34209052)
chr5 (389-435)||(11977593-11977639)
chr5 (339-373)||(15566452-15566486)
chr5 (385-427)||(31055738-31055780)
chr5 (390-423)||(843027-843060)
chr5 (382-435)||(4911252-4911305)
chr5 (336-416)||(17674160-17674241)
chr5 (331-372)||(36296297-36296338)
chr5 (403-435)||(14005911-14005943)
chr5 (336-372)||(14979960-14979996)
chr5 (385-433)||(24281098-24281146)
chr5 (385-433)||(24381065-24381113)
chr5 (337-373)||(33693937-33693973)
[»] scaffold0332 (2 HSPs)
scaffold0332 (382-435)||(3912-3965)
scaffold0332 (339-372)||(3733-3766)
[»] chr4 (70 HSPs)
chr4 (339-435)||(4505291-4505388)
chr4 (338-435)||(19878602-19878699)
chr4 (382-435)||(45043694-45043747)
chr4 (339-435)||(37624511-37624607)
chr4 (337-435)||(25231127-25231226)
chr4 (382-435)||(19451317-19451370)
chr4 (382-435)||(20448037-20448090)
chr4 (382-435)||(52957896-52957949)
chr4 (339-435)||(1819517-1819613)
chr4 (339-435)||(50203032-50203125)
chr4 (336-435)||(52915648-52915748)
chr4 (383-435)||(56460082-56460134)
chr4 (385-435)||(6991367-6991417)
chr4 (389-435)||(39982108-39982154)
chr4 (382-432)||(49089462-49089512)
chr4 (382-435)||(40345453-40345506)
chr4 (382-435)||(44571971-44572024)
chr4 (342-435)||(46392167-46392260)
chr4 (382-435)||(52253843-52253896)
chr4 (382-435)||(52848160-52848213)
chr4 (387-435)||(21864489-21864537)
chr4 (387-435)||(21920350-21920398)
chr4 (337-435)||(22220465-22220564)
chr4 (382-429)||(27943658-27943705)
chr4 (389-435)||(2728504-2728550)
chr4 (385-435)||(29370604-29370654)
chr4 (338-432)||(29519634-29519728)
chr4 (382-432)||(40837128-40837178)
chr4 (382-432)||(49080586-49080635)
chr4 (389-435)||(50621293-50621339)
chr4 (382-435)||(8971040-8971093)
chr4 (382-435)||(10573260-10573313)
chr4 (382-435)||(19930712-19930765)
chr4 (382-435)||(30261257-30261310)
chr4 (382-435)||(41496203-41496256)
chr4 (382-435)||(41920415-41920468)
chr4 (382-435)||(47817736-47817789)
chr4 (382-435)||(50623081-50623134)
chr4 (382-435)||(51733600-51733653)
chr4 (382-435)||(54042289-54042342)
chr4 (382-426)||(33033076-33033120)
chr4 (385-432)||(34316223-34316270)
chr4 (382-429)||(40010986-40011033)
chr4 (385-432)||(52162107-52162154)
chr4 (389-435)||(7906102-7906148)
chr4 (337-371)||(19282581-19282615)
chr4 (382-435)||(2493100-2493153)
chr4 (382-435)||(24940877-24940930)
chr4 (382-435)||(31917954-31918007)
chr4 (382-435)||(37654408-37654460)
chr4 (331-435)||(38991867-38991974)
chr4 (382-435)||(44061006-44061059)
chr4 (383-432)||(45839636-45839685)
chr4 (333-372)||(38510166-38510205)
chr4 (342-435)||(38510351-38510448)
chr4 (389-432)||(53814606-53814649)
chr4 (335-373)||(2728310-2728348)
chr4 (331-373)||(19282315-19282357)
chr4 (382-432)||(34413656-34413706)
chr4 (389-423)||(44650893-44650927)
chr4 (331-373)||(55126702-55126744)
chr4 (337-371)||(56556192-56556226)
chr4 (382-435)||(11364224-11364277)
chr4 (332-373)||(28116189-28116230)
chr4 (336-373)||(54042095-54042132)
chr4 (382-411)||(56555832-56555861)
chr4 (336-372)||(7905920-7905956)
chr4 (395-435)||(25123832-25123872)
chr4 (382-426)||(28734596-28734640)
chr4 (337-373)||(31941760-31941796)
[»] scaffold2107 (1 HSPs)
scaffold2107 (337-435)||(615-713)
[»] scaffold0565 (2 HSPs)
scaffold0565 (382-435)||(9743-9796)
scaffold0565 (382-432)||(10060-10110)
[»] scaffold0110 (2 HSPs)
scaffold0110 (382-435)||(24842-24895)
scaffold0110 (339-373)||(24652-24686)
[»] scaffold0502 (1 HSPs)
scaffold0502 (385-435)||(673-723)
[»] scaffold0294 (1 HSPs)
scaffold0294 (389-435)||(3606-3652)
[»] scaffold0182 (1 HSPs)
scaffold0182 (389-435)||(18356-18402)
[»] scaffold0039 (1 HSPs)
scaffold0039 (344-426)||(75410-75492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (382-435)||(1515-1568)
[»] scaffold0048 (1 HSPs)
scaffold0048 (382-435)||(62631-62684)
[»] scaffold0015 (2 HSPs)
scaffold0015 (385-435)||(21183-21233)
scaffold0015 (337-373)||(20991-21027)
[»] scaffold0026 (1 HSPs)
scaffold0026 (385-435)||(4141-4192)
[»] scaffold0300 (1 HSPs)
scaffold0300 (389-435)||(4570-4616)
[»] scaffold0047 (1 HSPs)
scaffold0047 (338-368)||(70364-70394)
[»] scaffold0983 (1 HSPs)
scaffold0983 (382-435)||(788-841)
[»] scaffold0119 (1 HSPs)
scaffold0119 (339-371)||(1499-1531)
[»] scaffold0010 (1 HSPs)
scaffold0010 (389-433)||(153318-153362)


Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 19 - 340
Target Start/End: Complemental strand, 10885856 - 10885535
Alignment:
Q  19 aggtactaagaagaagaaggaaggaaaatagtgtcaaaaataccatacaaaccatttgtaaaaaatgacacatcataatttttaagggtaaattagtcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10885856 aggtactaagaagaagaaggaaggaaaatagtgtcaaaaataccatacaaatcatttgtaaaaaatgacacatcataatttttaagggtaaattagtcat 10885757  T
Q  119 ttcaaattctttcttccctcatttcaaattccactctctctggccacttataaaccattctcacnnnnnnnnnntgattggttgaaaattcttacacatg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  10885756 ttcaaattctttcttccctcatttcaaattccactctctctggccacttataaaccattctcacaaaaaaaaaatgattggttgaaaattcttacacatg 10885657  T
Q  219 ttcaaagttcctaacttcttagtgtatcaattctaacaaggtaaggtctatggcttattcaacttcatctttgaacagtgctaattattagagtgcagtg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10885656 ttcaaagttcctaacttcttagtgtatcaattctaacaaggtaaggtctatggcttattcaacttcatctttgaacagtgctaattattagagtgcagtg 10885557  T
Q  319 aataaatgatggttaattaata 340  Q
    ||||||||||||||| ||||||    
T  10885556 aataaatgatggttagttaata 10885535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 17920954 - 17921007
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 17921007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 39698865 - 39698768
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||| ||||||||||||| ||||||        |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39698865 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39698768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 40362433 - 40362486
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 382 - 441
Target Start/End: Complemental strand, 39766014 - 39765955
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttctcact 441  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcact 39765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 43084779 - 43084729
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43084779 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 43084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 396412 - 396315
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 435  Q
    |||||| ||| ||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  396412 tactccctccattttaaaatgagtgtcgctttagcaaaaaacattgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttctt 396315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 6374412 - 6374465
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 6374465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 31693776 - 31693723
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttctt 31693723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 39463209 - 39463310
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    |||||||||| ||||||| ||||||||||||| ||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  39463209 ttaatactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttc 39463308  T
Q  434 tt 435  Q
    ||    
T  39463309 tt 39463310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 40228572 - 40228625
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 40228625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 15160638 - 15160548
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  15160638 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15160548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 4989440 - 4989529
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||| |||||         |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  4989440 tccgttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttctt 4989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 6116160 - 6116107
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttctt 6116107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 37559732 - 37559635
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||||||||||||||||||         |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  37559732 tactccatccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatcaatgtcactttcagtttccaatacaataataactttttctt 37559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 4760756 - 4760660
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||| ||||||        |||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||    
T  4760756 tactccctccgttttaaaataagtgtcgttttagccaaaaaaattgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttctt 4760660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 514875 - 514925
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  514875 ttttaaaatgaatgtcactttcaattttcaatgcaataataattttttctt 514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 9812171 - 9812221
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 9812221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 437
Target Start/End: Original strand, 43724333 - 43724434
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| | ||||||| |||||||| |||||||||||        |||||| ||||||||| ||||||||||||| |||||||||||||| ||||| ||    
T  43724333 taatacttcatccgtttcaaaatgagcgtcgctttagctaaaaaaattgtttcaaaatgaatttcactttcagtttccaatgcaataataattttttttt 43724432  T
Q  436 ct 437  Q
    ||    
T  43724433 ct 43724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 9880699 - 9880603
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||| |||||         |||||| |||||||||||||||  |||||| |||||||||||||| ||||||||    
T  9880699 tactccctccgttttaaaatgagtgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttctt 9880603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 43448714 - 43448764
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttt 43448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 436
Target Start/End: Original strand, 43561341 - 43561390
Alignment:
Q  386 tttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttc 436  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  43561341 tttaaaatgaatgtcaccttcagttttcaatgcaataataa-tttttcttc 43561390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 43974939 - 43974893
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  43974939 aaaatgaatgtcacttttagtttccaatgcaataataactttttctt 43974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 44713532 - 44713582
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttt 44713582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 7839456 - 7839509
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttctt 7839509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 426
Target Start/End: Complemental strand, 14234418 - 14234329
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 426  Q
    |||||| | ||||||||||||||||||||| ||||||        |||||||||||||||||||||||| | |||  |||||||||||||    
T  14234418 aatacttcatccgttttaaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcacttttaatttctaatgcaataataa 14234329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 29025901 - 29025848
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||| |||||||||||| ||||| |||||||||||||||||||||||    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttctt 29025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 15227522 - 15227618
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| | |||| |        |||||| |||||||||||||||||||  ||||||||||||||||| | ||||||    
T  15227522 tactccatccgttttaaaatgagtgttgttttacctaaaaatattgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttctt 15227618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 36921360 - 36921408
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  36921360 ttaaaatgaacgtcactttcaattttcaatgcaataataattttttctt 36921408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 14541946 - 14541911
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  14541946 atactccttccgttttaaaatgagtgtcgctttagc 14541911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 35356263 - 35356358
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||| ||||||||||||||        || ||| ||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  35356263 tactccatccgtttcaaaattagtgtcgctttagcaaaaaaa-ttatttcaaaatgaatatcattttcagtttccaatgcaataataactttttctt 35356358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 4760467 - 4760505
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4760467 ttaatactccatccgttttaaaatgagtgtcgctttagc 4760505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 9304788 - 9304735
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||    
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttctt 9304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 17655906 - 17655958
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||||| || ||||||||||||||||||||||||||||||||    
T  17655906 ttgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttctt 17655958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 29312344 - 29312303
Alignment:
Q  386 tttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  29312344 tttaaaatgaatgtcattttcagtttccaatgcaataataac 29312303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 45359049 - 45358996
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||| ||||| |||||||||||||||||| ||||||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttctt 45358996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 43594830 - 43594877
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||| |||| | |||||||| |||||||||||||||    
T  43594830 ttttaaaatgaatgtcgcttttaattttcaatacaataataacttttt 43594877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 1774258 - 1774224
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||||||||||||||||| |||||||    
T  1774258 tactccttccgttttaaaatgagtgtcactttagc 1774224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 5295554 - 5295508
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| |||||  ||||||||||||| ||||||||    
T  5295554 aaaatgaatgtcactttaagtttctaatgcaataataattttttctt 5295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 12339712 - 12339758
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    ||||||||||||||||| ||| |||||||||| ||||||||| ||||    
T  12339712 ttttaaaatgaatgtcatttttagttttcaatacaataataattttt 12339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 368
Target Start/End: Complemental strand, 7129522 - 7129493
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgct 368  Q
    ||||||||||||||||||||||||||||||    
T  7129522 tactccttccgttttaaaatgagtgtcgct 7129493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 19438242 - 19438287
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| ||||||||| ||||||| ||||| |||||||||||||||||    
T  19438242 aaataaatgtcactctcagtttccaatgtaataataactttttctt 19438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 429
Target Start/End: Complemental strand, 31234084 - 31234047
Alignment:
Q  392 atgaatgtcactttcagttttcaatgcaataataactt 429  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataactt 31234047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 31899395 - 31899350
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| || ||||||||||||| |||||||||||||| ||||||||    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttctt 31899350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 35052422 - 35052459
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  35052422 taatactccctccgtttcaaaatgagtgtcgctttagc 35052459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 11165480 - 11165516
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| |||||||||||||||||||| |||||||    
T  11165480 aatactccctccgttttaaaatgagtgtcactttagc 11165516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 40400126 - 40400078
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||| ||||| |||||||| ||||| ||||||||    
T  40400126 ttaaaatgaatgtgacttttagtttccaatgcaacaataattttttctt 40400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 40400441 - 40400493
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||||  |||  |||||||| ||||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttctt 40400493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 435
Target Start/End: Original strand, 41679338 - 41679370
Alignment:
Q  403 tttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||| ||||||||||||||||||    
T  41679338 tttcagttttcaatacaataataactttttctt 41679370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 50038360 - 50038270
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50038360 tccgttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 50038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 3153001 - 3152905
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||  ||||||        |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3153001 tactccctccgttttaaaatgagtgtcattttagcaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3152905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 19115342 - 19115438
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||| |||||||||||        |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  19115342 tactccctccgttttaaaatgagcgtcgctttagccaaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 19115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 38016330 - 38016426
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||||||||||| ||||||        |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016330 tactccatccgtttcaaaatgagtgtcgttttagccaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 38016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 432
Target Start/End: Complemental strand, 33194226 - 33194133
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||| ||||||||||||||||| ||||||        |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  33194226 tactccctccattttaaaatgagtgtcgttttagcaaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaatgataacttttt 33194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 53200832 - 53200779
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 53200779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 9189584 - 9189534
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9189584 ttttaaaatgaatgtcactttcagttttcaatgaaataataactttttctt 9189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 435
Target Start/End: Complemental strand, 45213922 - 45213821
Alignment:
Q  333 aattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||| |||| | ||||||||||||||||||||| |||||         ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  45213922 aattattacttcctccgttttaaaatgagtgtcgttttag-ttaaaaaattgttttaaaatgaatgtcactttcagtttctaatgcaataataacttttt 45213824  T
Q  433 ctt 435  Q
    |||    
T  45213823 ctt 45213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 50646307 - 50646209
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||| |||| |         |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  50646307 atactccttccgttttaaaatgagtgtcgttttaacaaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 50646209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 32492333 - 32492280
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  32492333 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 32492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 39356883 - 39356936
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  39356883 ttgttttaaaataaatgtcactttcagttttcaatgcaataataacattttctt 39356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 435
Target Start/End: Original strand, 51397960 - 51398061
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    |||||||||| ||||||||||||||||||||| ||||||         |||||| ||||| ||||||||||| ||||||||||| |||||||||||||||    
T  51397960 ttaatactccatccgttttaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttc 51398059  T
Q  434 tt 435  Q
    ||    
T  51398060 tt 51398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 30431075 - 30431171
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| || |||| ||||||||||||| ||||||        || ||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  30431075 tactccctctgtttcaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 30431171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 36460805 - 36460857
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 36460857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 4758952 - 4759042
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||          |||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  4758952 tccgttttaaaatgagtgtcgctttagtaaaaagaaattgttttaaaataaatgtcactttcactttccaatgcaataataactttttctt 4759042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 42571718 - 42571628
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||         |||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  42571718 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttctt 42571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 47137961 - 47138011
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataacttttt 47138011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 50088513 - 50088415
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||| ||||||||||||| ||||||         ||||||||||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  50088513 atactccttccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttctt 50088415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 2458005 - 2458058
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctt 2458058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 11019978 - 11019925
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttctt 11019925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 11393543 - 11393596
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttctt 11393596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 22857088 - 22857141
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttctt 22857141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 30426476 - 30426423
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 30426423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 41850388 - 41850441
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttctt 41850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 44676219 - 44676272
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttctt 44676272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 47895496 - 47895443
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 47895443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 48901718 - 48901771
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48901771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 48903284 - 48903337
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 48903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 33024449 - 33024399
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  33024449 ttttaaaatgaatgttactttcagtttccaatgcaataataactttatctt 33024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 36729955 - 36729909
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  36729955 aaaatgaatgtcactttcaatttccaatgcaataataactttttctt 36729909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 435
Target Start/End: Original strand, 42886697 - 42886802
Alignment:
Q  332 taattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||          |||||| ||||||||||| ||||| | ||| |||||||||||||||||    
T  42886697 taattcatactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgttactttaaatttccaatgcaataataactt 42886796  T
Q  430 tttctt 435  Q
    ||||||    
T  42886797 tttctt 42886802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 23208484 - 23208390
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||| ||||||||| ||||||        |||||| ||||||||||||||||||||||| |||  ||||||||||||||||||    
T  23208484 tactccctccgtttcaaattgagtgtcgttttagctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttctt 23208390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 30315307 - 30315360
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||    
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttctt 30315360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 36844894 - 36844841
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||  |||||||||||||||||||||||||||||||| ||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttctt 36844841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 38140949 - 38140998
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacctttt 38140998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 38363740 - 38363833
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| || |||||||||||||||||| ||||||          |||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  38363740 tactccatctgttttaaaatgagtgtcgttttagcaaaaaaaaaagtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttt 38363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 42071983 - 42072036
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| |||||| ||| ||||| |||||||||||||||||||||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttctt 42072036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 52654310 - 52654355
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttctt 52654355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 36461048 - 36461012
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||||||||||||||||||    
T  36461048 aatactccttccgttttaaaatgagtgtcgctttagc 36461012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 4392157 - 4392247
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||| ||||||         |||||| ||||||||||||| ||||||||| ||||  |||||||||||||||||    
T  4392157 tccgttttaaaatgagtgtcgttttagcaaaaaataattgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttctt 4392247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 8817139 - 8817189
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttc 8817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 19373584 - 19373634
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||| ||||||||||| ||||||||| ||||||||||||||    
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataacttttt 19373634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 31583586 - 31583533
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||||||||| || |||||||||||  |||||||    
T  31583586 ttgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttctt 31583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 35557910 - 35557857
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||  || ||||||||||||| |||||||||||||| ||||||||    
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttctt 35557857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 47823603 - 47823550
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||| ||| |||||| ||||||||||||| ||||||||    
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctt 47823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 419
Target Start/End: Complemental strand, 51058304 - 51058267
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgca 419  Q
    |||||||||||||||||||||||| |||||||||||||    
T  51058304 ttgttttaaaatgaatgtcactttaagttttcaatgca 51058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 7231047 - 7230995
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||||||||||||||| ||||   ||||||||||||||||||||||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttctt 7230995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 51324191 - 51324143
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttt 430  Q
    |||||||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  51324191 ttgttttaaaataaatgtcattttcagtattcaatgtaataataacttt 51324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 54933113 - 54933149
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||||||||||||||||||||||||||||    
T  54933113 aatactccatccgttttaaaatgagtgtcgctttagc 54933149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 30934958 - 30934908
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||   ||||||| |||||||||||||| ||||||||    
T  30934958 ttgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttctt 30934908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 366
Target Start/End: Complemental strand, 27067842 - 27067812
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcg 366  Q
    |||||||||||||||||||||||||||||||    
T  27067842 taatactccttccgttttaaaatgagtgtcg 27067812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 40487833 - 40487879
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||   ||| |||||||||||||||||||||||    
T  40487833 aaaatgaatgtcacttttgatttccaatgcaataataactttttctt 40487879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 20512406 - 20512439
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||| |||||||||||||||||||||||||||    
T  20512406 tactccctccgttttaaaatgagtgtcgctttag 20512439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 27483382 - 27483349
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgcttta 371  Q
    ||||||||||||||| ||||||||||||||||||    
T  27483382 atactccttccgtttcaaaatgagtgtcgcttta 27483349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 36730006 - 36729969
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  36730006 taatattccttccgttttaaaatgagtgtcgttttagc 36729969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 419
Target Start/End: Original strand, 42939923 - 42940004
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc-nnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgca 419  Q
    |||||| |||||||||||||||||||||||||| |         |||||| ||||||||||||| ||||| |||||||||||    
T  42939923 tactccatccgttttaaaatgagtgtcgctttaacaaaaataatttgtttcaaaatgaatgtcattttcatttttcaatgca 42940004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 43169289 - 43169322
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||| |||||||||||||||||||||||||||    
T  43169289 tactccctccgttttaaaatgagtgtcgctttag 43169322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 51398254 - 51398217
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  51398254 taatactccctccgtttcaaaatgagtgtcgctttagc 51398217  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 4476272 - 4476308
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  4476272 aatactccttccgttttaaaataagtgtcgttttagc 4476308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 20028338 - 20028390
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| | ||||||| | ||||||||| |||||| ||||||||||    
T  20028338 tgttttaaaatgattatcacttttaattttcaatgtaataatgactttttctt 20028390  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 42740465 - 42740429
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  42740465 aatactccttccgttttaaaataagtgtcgttttagc 42740429  T

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Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 435
Target Start/End: Complemental strand, 32228215 - 32228113
Alignment:
Q  333 aattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||| ||||||||||||||||||||| ||||||        ||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  32228215 aattaatactccatccgttttaaaatgagtgtcgttttagcaaaataaattgttttaaaatgaatgtcacttttggttttaaatgcaataataacttttt 32228116  T
Q  433 ctt 435  Q
    |||    
T  32228115 ctt 32228113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 5717468 - 5717564
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  5717468 tactccatccgttttaaaatgagtgtcgctttagcaaaaaaaaatgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 5717564  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 16792439 - 16792534
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||||||||        |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  16792439 tactccatccgttttaaaatgagtgtcgctttagcaaaaaaa-ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 16792534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 17703017 - 17703070
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 17703070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 18719587 - 18719534
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18719587 ttgttttgaaatgaatgtcactttcagttttcaatgcaataataactttttctt 18719534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 29808810 - 29808863
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttctt 29808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 45301763 - 45301816
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45301816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 38926604 - 38926651
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 38926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 28072565 - 28072615
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataacttttt 28072615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 441386 - 441333
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttctt 441333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 4469499 - 4469552
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttctt 4469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 6220559 - 6220506
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 6220506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 18579165 - 18579218
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 18579218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 335 - 435
Target Start/End: Complemental strand, 29396883 - 29396782
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttag-cnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    |||||||||| ||| ||| ||||||||||||||||||| |        |||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  29396883 ttaatactccctccatttcaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 29396784  T
Q  434 tt 435  Q
    ||    
T  29396783 tt 29396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 29411694 - 29411747
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctt 29411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 43427442 - 43427389
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 43971502 - 43971555
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 43971555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 429
Target Start/End: Complemental strand, 11188692 - 11188600
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    ||||||||||||||||||||||||||||||  ||||||        || ||| |||||||||||||||||||||||||||||||| ||||||||    
T  11188692 taatactccttccgttttaaaatgagtgtcattttagcaaaaaaa-ttatttcaaaatgaatgtcactttcagttttcaatgcaacaataactt 11188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 4132977 - 4133075
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||| ||||||||||||| ||||||         |||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  4132977 atactccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 4133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 16463180 - 16463134
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttctt 16463134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 12342091 - 12342144
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||| |||| |||||||||||||||||||||||    
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttctt 12342144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 22620533 - 22620436
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||||||||         |||||| ||||||| |||| |||||||||| |||||||||||||||||||||||    
T  22620533 tactccctccgttttaaaatgagtgttgctttagcaaaataaagttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttctt 22620436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 25383639 - 25383586
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttctt 25383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 37038921 - 37038880
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataa 423  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataa 37038880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 17696023 - 17695927
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| | ||||| ||||||||||||||||||||        |||||| ||||||| ||||||||||||||| |||||  ||||||||||||||||    
T  17696023 tactcccttcgtttcaaaatgagtgtcgctttagccaaaaaaattgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttctt 17695927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 34546529 - 34546433
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||||||||||| |||| |        |||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  34546529 tactccctccgtttcaaaatgagtgtcgttttaaccaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 432
Target Start/End: Original strand, 36177924 - 36178024
Alignment:
Q  333 aattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||||||||||| | ||||| ||||||||||||| ||||||         |||||| |||||||||||||||||| |||| |||||||||||||||||||    
T  36177924 aattaatactccattcgtttcaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttccgtttccaatgcaataataactttt 36178023  T
Q  432 t 432  Q
    |    
T  36178024 t 36178024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 4051859 - 4051809
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 4051809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 12566135 - 12566085
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttt 12566085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 27986034 - 27986083
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataa-aacttttt 27986083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 35799201 - 35799251
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt 35799251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 8540036 - 8540089
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| || ||||||||| || ||||||||||||||||||||    
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctt 8540089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 13561992 - 13562045
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| |||||||||||||||||  ||||||||||||||||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttctt 13562045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 27964517 - 27964472
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  27964517 aaatgaatgtcacttttagtttccaatgcaataataactttttctt 27964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 35046516 - 35046565
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataactttt 35046565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 7029010 - 7028914
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||| |||| |        |||||| ||||||||||||| ||||| ||| |||||||||||| ||||||||||    
T  7029010 atactccatccgttttaaaatgagtgtcgatttatcaaaaaaa-ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttctt 7028914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 435
Target Start/End: Original strand, 7644649 - 7644697
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  7644649 ttaaaatgaatgtcactttcagtattcaatataataataactttttctt 7644697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 40608753 - 40608706
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  40608753 ttaaaatgaatgtcactttcag-tttcaatgcaataataactttctctt 40608706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 45082046 - 45082002
Alignment:
Q  391 aatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||    
T  45082046 aatgaatgtcactttcagtttccaatgcaataataattttttctt 45082002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 7874844 - 7874746
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||| ||||||||||||||||||| |||| |        || ||||||||| |||||||||||  |||| |||||||||||||||||||||||    
T  7874844 taataatcctttcgttttaaaatgagtgtcgttttacctaaaaaaattattttaaaattaatgtcactttt-gtttccaatgcaataataactttttctt 7874746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 426
Target Start/End: Complemental strand, 9366317 - 9366230
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 426  Q
    |||||| ||| ||||||||| ||||||| ||||||        |||||||||||| ||||||||||| ||||||||||| ||||||||    
T  9366317 tactccatccattttaaaataagtgtcgttttagcaaaaaaaattgttttaaaataaatgtcactttaagttttcaatgaaataataa 9366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 435
Target Start/End: Original strand, 45423618 - 45423669
Alignment:
Q  384 gttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||| | ||||||||| |||||||||||||||||||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttctt 45423669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 9391706 - 9391660
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||    
T  9391706 aaaatgaatgtcattttcagtttttaatgcaataataattttttctt 9391660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 10195572 - 10195622
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||| ||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacatttt 10195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 12394076 - 12394026
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataacttttt 12394026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 419
Target Start/End: Complemental strand, 34035899 - 34035865
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgca 419  Q
    |||||||||||||||||||||||||||||||||||    
T  34035899 ttttaaaatgaatgtcactttcagttttcaatgca 34035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 16807672 - 16807619
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 16846953 - 16846900
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||||||||||| ||||| |||||||||||||| ||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttctt 16846900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 33482384 - 33482331
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||| | ||||||||| |||||||  ||||||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttctt 33482331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 395 - 432
Target Start/End: Original strand, 42753756 - 42753793
Alignment:
Q  395 aatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||||||| |||||||||||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttt 42753793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 25383395 - 25383431
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||||||||||||||||||||||||||||    
T  25383395 aatactccatccgttttaaaatgagtgtcgctttagc 25383431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 432
Target Start/End: Original strand, 14285943 - 14285986
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||    
T  14285943 aaaatgaatgtcattttcagtttccaatacaataataacttttt 14285986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 14378422 - 14378387
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||||| ||||||||||||||||||||    
T  14378422 atactccttccgtttcaaaatgagtgtcgctttagc 14378387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 30855105 - 30855152
Alignment:
Q  384 gttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||| ||||||||||||||| ||||||| |||||||||||||| ||||    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataattttt 30855152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 37724200 - 37724235
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37724200 atactccctccgttttaaaatgagtgtcgctttagc 37724235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Original strand, 40987193 - 40987228
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40987193 atactccctccgttttaaaatgagtgtcgctttagc 40987228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 777768 - 777818
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||| ||||| |||  |||||||||||||| ||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataacctttt 777818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 4766129 - 4766163
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||| ||||||||||||    
T  4766129 tactccttccgttttaaaatgaatgtcgctttagc 4766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 16807429 - 16807463
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  16807429 tactccctccgttttaaaatgagtgtcgctttagc 16807463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 16846710 - 16846744
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  16846710 tactccctccgttttaaaatgagtgtcgctttagc 16846744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 19164362 - 19164408
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||| || ||||| |||| ||||||||||||||||||||||    
T  19164362 aaaatgaatggcaatttcaatttttaatgcaataataactttttctt 19164408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 25332812 - 25332778
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  25332812 tactccctccgttttaaaatgagtgtcgctttagc 25332778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 440
Target Start/End: Complemental strand, 36106554 - 36106496
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttctcac 440  Q
    ||||||||||||||||||||||||   ||| |||||||||  |||||||||||| ||||    
T  36106554 ttgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttcac 36106496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4288866 - 4288813
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||| |||||| ||||||  ||||||||||||| ||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttctt 4288813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4658388 - 4658335
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||  ||||| ||||||||| |||||||| ||||||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttctt 4658335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 7042341 - 7042288
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||| ||  |||||||||||| ||||||||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctt 7042288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 16463224 - 16463191
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgcttta 371  Q
    ||||||||||||||||||||||||| ||||||||    
T  16463224 atactccttccgttttaaaatgagtctcgcttta 16463191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 36685895 - 36685842
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||| ||||||| |||  ||| ||||||||| ||||||||    
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttctt 36685842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 1423206 - 1423242
Alignment:
Q  399 tcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  1423206 tcactttcagttttcaatggaataataacttattctt 1423242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 42743269 - 42743233
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  42743269 aatactccctccattttaaaatgagtgtcgctttagc 42743233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 42970131 - 42970095
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  42970131 aatactccttccgttttaaaataagtgtcgttttagc 42970095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 10842733 - 10842831
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| |||||||||||||||||| ||||||        || ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  10842733 aatactccttctgttttaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataacattttctt 10842831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 25487089 - 25487139
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25487089 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 25487139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 27720911 - 27721009
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||| ||||||||||||||||||||        || ||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  27720911 aatactccatccgtttcaaaatgagtgtcgctttagccaaaaaatttatttaaaaatgaatgtcactttcagttttcaatataataataactttttctt 27721009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 50249263 - 50249361
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnntt-gttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| || |||||||||||||||||||||||||        || |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  50249263 atactccctctgttttaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 15823032 - 15823085
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15823032 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 15823085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 44557241 - 44557144
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||| |||||||||         |||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  44557241 atactccatccgttttaaaatgagtttcgctttagtaaaaaaatttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttctt 44557144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 32807137 - 32807038
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||| ||||||||||||| ||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  32807137 aatactccctccgtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 32807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 15573605 - 15573655
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 5463529 - 5463626
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||| ||||||| ||||| ||||||        |||||| ||||||||||||||||||||||| ||||||||| |||||||||||||    
T  5463529 atactccctccgtttcaaaatgaatgtcgttttagcaaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttctt 5463626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 12591235 - 12591182
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 12591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 13408418 - 13408365
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttctt 13408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 26352234 - 26352181
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttctt 26352181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 29567894 - 29567947
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 29567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 44258660 - 44258607
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 44258607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 347 - 432
Target Start/End: Original strand, 46045936 - 46046021
Alignment:
Q  347 ccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||| |||||         |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  46045936 ccgttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatgtcactttcagttttcgatgcaataataacttttt 46046021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 26595221 - 26595169
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttctt 26595169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 433
Target Start/End: Complemental strand, 48025452 - 48025356
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||| ||||||||||||||||||||| ||||||         |||||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  48025452 atactccctccgttttaaaatgagtgtcgttttagcaaaaaaaaattgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttc 48025356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 34032279 - 34032180
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| |||| || ||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34032279 aatactccctccgcttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 34032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 34047433 - 34047335
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||| ||||||          |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  34047433 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttctt 34047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 1740794 - 1740744
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataacttttt 1740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 2611028 - 2610930
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||||||||||||||||| ||||||        ||||||| ||||||||   |||||||||||||||| ||||||||| ||||||||    
T  2611028 aatactccatccgttttaaaatgagtgtcgttttagcaaaaaaaattgttttgaaatgaatacgactttcagttttcaatacaataataattttttctt 2610930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 40717442 - 40717396
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  40717442 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 50094234 - 50094280
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  50094234 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 50094280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 9915441 - 9915494
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttctt 9915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 27208944 - 27209037
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||| |||||||||||||||||  ||||||        ||||||  ||||||||||||||||| |||| ||||||||||||||||||||    
T  27208944 tactccttctgttttaaaatgagtgtcattttagccagaaaaattgtttcgaaatgaatgtcactttcggtttccaatgcaataataacttttt 27209037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 35848086 - 35848033
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttctt 35848033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 44108597 - 44108650
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttctt 44108650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 30292938 - 30292986
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttt 430  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataacttt 30292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 46286966 - 46286918
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  46286966 ttaaaaagaatgtcactttcatttttcaatgcaataataactttttctt 46286918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 46554754 - 46554846
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||| |||| |        ||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  46554754 tactccctccgttttaaaatgagtgtcgttttaaccaaaaaa-ttgttttaaaatgaatgtcaccttcagtttccactgcaataataacttttt 46554846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 432
Target Start/End: Complemental strand, 14373603 - 14373516
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||||||||||         || ||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  14373603 tccgttttaaaatgagtgtcgctttagctaaaaaaaattattttaaaatgaatgtcattttcagtttccaatgcaacaataacttttt 14373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 14593465 - 14593420
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttctt 14593420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 16757347 - 16757294
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattctt 16757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 26755218 - 26755271
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||| || |||||||||||||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttctt 26755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 31491923 - 31491870
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttctt 31491870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 38531450 - 38531397
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  38531450 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 38531397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 48009008 - 48009061
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| || ||| |||||| ||||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttctt 48009061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 49468864 - 49468811
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttctt 49468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 24483343 - 24483439
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||| ||||||||||||||||| |||||         |||||| ||||||||||||| ||||||||| |||| ||||||||||| ||||||    
T  24483343 tactccatccattttaaaatgagtgtcgttttagaaaaaaaaattgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttctt 24483439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 24884416 - 24884463
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  24884416 ttttaaaataaatgtcactttcaatttccaatgcaataataacttttt 24884463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 435
Target Start/End: Original strand, 34110535 - 34110578
Alignment:
Q  392 atgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 425
Target Start/End: Original strand, 38947653 - 38947696
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataata 425  Q
    |||||||||||||||||||||||||||| | |||||||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataata 38947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 28200134 - 28200168
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||||||||||||||||    
T  28200134 tactccttccgttttaaaatgagtgtcgctttagc 28200168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 33622515 - 33622465
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  33622515 ttttaaaatgaatgtcattttcgattttcaatgcaataataactttatctt 33622465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 49894756 - 49894794
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  49894756 ttaatactccttccgttttaaaatgagtatcgctttagc 49894794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 49900910 - 49900860
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttc-aatgcaataataacttttt 432  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||||||||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataacttttt 49900860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 7191360 - 7191307
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||||  ||||| ||| |||||||||||||||||    
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttctt 7191307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 17920022 - 17919985
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  17920022 taatactccctccgttttaaaatgagtgtcgctttagc 17919985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 18794694 - 18794642
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||| |||||||||  ||||||||||||||||||||||    
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttctt 18794642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 25151821 - 25151866
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttctt 25151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 31798587 - 31798640
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||| |||||||||||||| | || ||||||||||||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttctt 31798640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 52024387 - 52024334
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||||| | |||||||||||||||||||||||| ||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttctt 52024334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 52125281 - 52125232
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataactttttcttctca 439  Q
    |||||||||||| ||||||||| |||||||||||||| ||||| ||||||    
T  52125281 aaatgaatgtcaatttcagtttccaatgcaataataattttttattctca 52125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 52706880 - 52706932
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| ||||||||    
T  52706880 ttgttttaaaat-aatgtcactttcagtttttaatgtaataataattttttctt 52706932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 39125647 - 39125699
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||||| ||||| ||| |||||||||||||||||||| ||||||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctt 39125699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 373
Target Start/End: Original strand, 24040931 - 24040970
Alignment:
Q  334 attaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  24040931 attaatactccctacgttttaaaatgagtgtcgctttagc 24040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 43358397 - 43358303
Alignment:
Q  340 actccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||| ||||||||||||||||||||| ||||||          |||||| || |||||| ||||||||| ||||||||||||||||||| ||||    
T  43358397 actccctccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaatatgaatatcactttcacttttcaatgcaataataacatttt 43358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 2459254 - 2459212
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||    
T  2459254 ttaattcatactccctccgtttcaaaatgagtgtcgctttagc 2459212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 7214185 - 7214136
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| ||||||||||   ||||||||||||||||||| ||||||||    
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctt 7214136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 12851976 - 12851938
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  12851976 ttaatactccatccgttttaaaataagtgtcgctttagc 12851938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 24611666 - 24611620
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||||    
T  24611666 aaaatgaatgtcacttttagtttctaatgtaataataactttttctt 24611620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 39477860 - 39477810
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||| |||||||||| | ||| |||||||||||||| |||||    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataatttttt 39477810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 44024499 - 44024533
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  44024499 tactccctccgttttaaaatgagtgtcgctttagc 44024533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 34032001 - 34032034
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||||||||||||||||||||||||| |||||    
T  34032001 tactccttccgttttaaaatgagtgtcgttttag 34032034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 49426565 - 49426515
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||| ||||||||    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttctt 49426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 50094178 - 50094215
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  50094178 taatactccatccgttttaaaatgagtgtcgttttagc 50094215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 43759347 - 43759383
Alignment:
Q  399 tcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttctt 43759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 45749411 - 45749443
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgcttta 371  Q
    |||||| ||||||||||||||||||||||||||    
T  45749411 tactccatccgttttaaaatgagtgtcgcttta 45749443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 432
Target Start/End: Complemental strand, 46271468 - 46271420
Alignment:
Q  384 gttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||| ||||||||||||| ||||||||| ||||| |||||||| |||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataatttttt 46271420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 435
Target Start/End: Complemental strand, 49403003 - 49402971
Alignment:
Q  403 tttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| |||||||||||||||||||||||    
T  49403003 tttcagtttccaatgcaataataactttttctt 49402971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 51244988 - 51244937
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| || |||||||||| ||| |||| ||||||||||||||||||    
T  51244988 tgttttaaaataaaagtcactttcacttt-caatacaataataactttttctt 51244937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 346 - 435
Target Start/End: Complemental strand, 716052 - 715963
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  716052 tccgttttaaaatgagtgtcgctttagccaaaaaatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 44567241 - 44567141
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttag-cnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttct 434  Q
    ||||||||| |||||||||||||| |||||||||||| |        |||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  44567241 taatactccctccgttttaaaatgggtgtcgctttagtcaaaaaaatttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttct 44567142  T
Q  435 t 435  Q
    |    
T  44567141 t 44567141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 45948829 - 45948730
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||| ||||||          |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45948829 atactccttccgttttaaaatgagtgtcgttttagcaaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 45948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 435
Target Start/End: Original strand, 10599165 - 10599264
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| ||||||||||||||||||||| |||| |         ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10599165 taatactccctccgttttaaaatgagtgtcgttttaacaaaaaaaaatgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttctt 10599264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 22297952 - 22298047
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||| ||||||        |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  22297952 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaa-ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 22298047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 27935765 - 27935815
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 27935815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 19105154 - 19105101
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttctt 19105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 27947654 - 27947601
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27947654 ttgtcttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 27947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 1741946 - 1742042
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||||||||||| ||||||        |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1741946 tactccctccgtttcaaaatgagtgtcgttttagcccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 1742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 48843550 - 48843602
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttct 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttct 48843602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 2296999 - 2297089
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  2296999 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttctt 2297089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 12977883 - 12977786
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||| ||||||||||||||||||||||||         |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  12977883 tactccctcctttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 12977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 13405280 - 13405227
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttctt 13405227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 24680126 - 24680179
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 24680179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 42880087 - 42880034
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttctt 42880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 435
Target Start/End: Complemental strand, 18528681 - 18528579
Alignment:
Q  332 taattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||||||||||||||| |||||||||||||||||||||||||        || ||||||||||||| |||||||||||||    |||||||||||| |||    
T  18528681 taattaatactccttc-gttttaaaatgagtgtcgctttagccaaaaatattattttaaaatgaatttcactttcagtttcttttgcaataataacgttt 18528583  T
Q  432 tctt 435  Q
    ||||    
T  18528582 tctt 18528579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 10476137 - 10476187
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  10476137 ttttaaaatgaatgtcactttcactttccaatgcaataataactttttctt 10476187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 37490789 - 37490835
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  37490789 aaaatgaatgtcactttcagttttcaatgcaataataattttttctt 37490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 336 - 434
Target Start/End: Original strand, 39557274 - 39557372
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttct 434  Q
    ||||||| | ||||||||||||||||||||| |||| |        || ||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  39557274 taatacttcatccgttttaaaatgagtgtcgttttaactaaaaaaattattttaaaataaatgtcactttcagttttcaatgtaataataattttttct 39557372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 424
Target Start/End: Complemental strand, 45933737 - 45933695
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat 424  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat 45933695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 8603973 - 8604026
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttctt 8604026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 18292288 - 18292384
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    |||||| ||||||| ||||||||||||||||||||          |||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  18292288 tactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttc 18292384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 29531088 - 29531035
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||    
T  29531088 ttgttttgaaatgaatgtcattttcagttttcaatgcaataataattttttctt 29531035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 34274792 - 34274845
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctt 34274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 42285906 - 42285959
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttctt 42285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 18270582 - 18270626
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18270582 aaaatgaatgtcactttcagtttccaatgcaataataactttttc 18270626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 430
Target Start/End: Original strand, 40339413 - 40339505
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttt 430  Q
    |||||| ||||||||||||||||||||| ||||||         |||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  40339413 tactccctccgttttaaaatgagtgtcgttttagccaaaaagaattgtttcaaaatgactgtcactttcaattttcaatgcaataataacttt 40339505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 384 - 432
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  384 gttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 32501902 - 32501855
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  32501902 ttgttttaaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 25440873 - 25440923
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  25440873 ttttaaaatatatgtcactttcagtttccaatgcaataataactttttctt 25440923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 30312459 - 30312509
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  30312459 ttttaaaatgaatgtcactttcggttttcaatacaataataattttttctt 30312509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 37502324 - 37502370
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  37502324 aaaatgaacgtcactttcagtttccaatgcaataataactttttctt 37502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 48684728 - 48684774
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  48684728 aaaatgaatgtcactttcggtttccaatgcaataataactttttctt 48684774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 6747225 - 6747274
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataactttt 6747274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 23935420 - 23935473
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||  ||||||||| |||||||||||||||||||||||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttctt 23935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 24133283 - 24133230
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||| |||| |||||||||||||| |||||||||||||| ||||||||    
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttctt 24133230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 435
Target Start/End: Complemental strand, 31930057 - 31929960
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag-cnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||||||||||| |        || ||||||||||||| | | |||||||||||||||||||||||| ||||||||    
T  31930057 tactccatccgttttaaaataagtgtcgctttagacaaaaaaaattattttaaaatgaatattattttcagttttcaatgcaataataattttttctt 31929960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 33939887 - 33939834
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||  |||| ||||| |||||||||||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctt 33939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 34012124 - 34012209
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||| ||||||        |||||||||||||||||||||||| ||||| ||||| | ||||||||||||    
T  34012124 tccgttttaaaatgagtgtcgttttagccaaaaaa-ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttt 34012209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 40753581 - 40753528
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  40753581 ttgttataaaatgaatgtcattttcagttttcaatgtaataataattttttctt 40753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 44453136 - 44453181
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttt 430  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  44453136 tttttaaatgaatgtcactttcagtttccaatgcaataataacttt 44453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 45933492 - 45933533
Alignment:
Q  332 taattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  45933492 taattaatactccctccgttttaaaatgagtgtcgctttagc 45933533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 30833292 - 30833257
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||||||||||||||||||||||||||    
T  30833292 atactccttccgttttaaaatgagtgtcgctttagc 30833257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 24780459 - 24780409
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| |||||||||||||||||||||||  ||||||||||||| |||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataatttttt 24780409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 28289220 - 28289266
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  28289220 aaaataaatgtcactttgagttttcaatgcaataataacattttctt 28289266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 435
Target Start/End: Original strand, 41137685 - 41137779
Alignment:
Q  341 ctccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| ||||||||||||||||||||| |||| |        |||||| | |||||||| |||||| ||||| |||||||||||||| ||||||||    
T  41137685 ctccctccgttttaaaatgagtgtcgttttaccaaaaaaaattgtttcacaatgaatgccacttttagtttccaatgcaataataattttttctt 41137779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 44453378 - 44453340
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  44453378 ttaatactccttccgttttaaaatgagtgtcgttttagc 44453340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 6563563 - 6563514
Alignment:
Q  386 tttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| ||||||||||||||| |||  |||||||||||||||||    
T  6563563 tttaaaatgaacgtcactttcagtttttaatttaataataactttttctt 6563514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 31418666 - 31418613
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| |||  |||||||||||| |||||||||||||||||||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttctt 31418613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 36807933 - 36807986
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||| ||||  |||||||| ||||||||||||||||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttctt 36807986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 433
Target Start/End: Complemental strand, 21752257 - 21752213
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||    
T  21752257 aaaataaatgtcattttcagtttccaatgcaataataactttttc 21752213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 1031153 - 1031203
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| |||||||||||||| |||||||| || |||||||||||| ||||    
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacatttt 1031203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 6522060 - 6522026
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  6522060 tactccctccgttttaaaatgagtgtcgctttagc 6522026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 18733408 - 18733442
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  18733408 tactccatccgttttaaaatgagtgtcgctttagc 18733442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 35777817 - 35777867
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||| |||||||||||| ||||  |||||||||||||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataacttttt 35777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 7899927 - 7899972
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    |||||||||||||||||| | ||| |||||||||||||||| ||||    
T  7899927 ttgttttaaaatgaatgtaattttgagttttcaatgcaatattaac 7899972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 371
Target Start/End: Original strand, 16564716 - 16564745
Alignment:
Q  342 tccttccgttttaaaatgagtgtcgcttta 371  Q
    ||||||||||||||||||||||||||||||    
T  16564716 tccttccgttttaaaatgagtgtcgcttta 16564745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 371
Target Start/End: Complemental strand, 16600946 - 16600917
Alignment:
Q  342 tccttccgttttaaaatgagtgtcgcttta 371  Q
    ||||||||||||||||||||||||||||||    
T  16600946 tccttccgttttaaaatgagtgtcgcttta 16600917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 19906658 - 19906621
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  19906658 taatactccctccgtttcaaaatgagtgtcgctttagc 19906621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 371
Target Start/End: Complemental strand, 23935663 - 23935630
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgcttta 371  Q
    ||||||| ||||||||||||||||||||||||||    
T  23935663 atactccctccgttttaaaatgagtgtcgcttta 23935630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 30833007 - 30833040
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||||||||||| |||||||||||||||||||    
T  30833007 tactccttccgtttcaaaatgagtgtcgctttag 30833040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 32345743 - 32345780
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  32345743 taatactccctccgtttcaaaatgagtgtcgctttagc 32345780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 37815722 - 37815775
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||| |||||| ||| |||| ||||||||| ||||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttctt 37815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 42753706 - 42753751
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    |||||| ||||||||||||||||||| ||| |||| ||||||||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataac 42753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 45499980 - 45499927
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||| ||||||||||||| |||||| |||||||  |||||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttctt 45499927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 29636373 - 29636333
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    ||||| |||||||||||||||||  ||||||||||||||||    
T  29636373 aaaataaatgtcactttcagtttctaatgcaataataactt 29636333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 42259459 - 42259495
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  42259459 aatactccttccgtttcaaaatgagtgtcgctctagc 42259495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 24163913 - 24163816
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||  ||||||        |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24163913 atactccctccgttttaaaatgagtgtcattttagccaaaaaaattgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 24163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 431
Target Start/End: Original strand, 9940601 - 9940695
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    ||||||| ||||||| |||||||||||||||||| |         |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9940601 atactccatccgtttcaaaatgagtgtcgctttaacaaaaaaaaattgttttaaaatgattgtcactttcagttttcaatgcaataataactttt 9940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 18737245 - 18737192
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttctt 18737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 234032 - 234085
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  234032 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4850650 - 4850597
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 4850597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 13504002 - 13503953
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 13503953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 29399944 - 29399997
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 29399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 31233780 - 31233727
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||    
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttctt 31233727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 12588527 - 12588579
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttct 437  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  12588527 ttttaaaatgaatgttactttcagtttgcaatgcaataataacttttttttct 12588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 32429239 - 32429335
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||| ||||||        |||||| |||| |||||||||||| | ||| |||||||||||||||||||||||    
T  32429239 atactccatccgttttaaaatgagtgtcgttttagccaaaaaa-ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttctt 32429335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 10520827 - 10520741
Alignment:
Q  349 gttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||  ||||||        |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||    
T  10520827 gttttaaaatgagtgtcattttagctaaaaaaattgttttaaaataaatgtcactttcaattttcaatacaataataattttttctt 10520741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 19674985 - 19675031
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19674985 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 19675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 430
Target Start/End: Original strand, 577022 - 577107
Alignment:
Q  344 cttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttt 430  Q
    ||||||||||||||||||| ||| ||||||        |||||||||||| | | ||||||||||||||||||||||||||||||||    
T  577022 cttccgttttaaaatgagtatcgttttagcaaaaaaa-ttgttttaaaataactatcactttcagttttcaatgcaataataacttt 577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 21272257 - 21272204
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||| |||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctt 21272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 372
Target Start/End: Original strand, 29713316 - 29713351
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||||||||||||||||||||||||||||||||||    
T  29713316 aatactccttccgttttaaaatgagtgtcgctttag 29713351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 8030647 - 8030693
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||    
T  8030647 aaaatgaatgttactttcagttttcaatgtaataataattttttctt 8030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 432
Target Start/End: Complemental strand, 12063657 - 12063615
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  12063657 aaatgaatgtcactttcagtttccaatgcaataataatttttt 12063615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 24556080 - 24556030
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| ||||||| ||||||||||||||| |||||||| ||||||||    
T  24556080 ttttaaaataaatgtcattttcagttttcaatgtaataataattttttctt 24556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 29713554 - 29713508
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| |||| |||| |||||||||||||||||||||||    
T  29713554 aaaatgaatgtcattttccgtttccaatgcaataataactttttctt 29713508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 31443601 - 31443551
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataacttttt 31443551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 432
Target Start/End: Complemental strand, 10540710 - 10540613
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||| | ||||||||||||||||||||| ||||||         |||||| ||||| ||||||||||||| ||| ||||||||||||||| ||||    
T  10540710 taatacttcctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt 10540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 431
Target Start/End: Complemental strand, 23259480 - 23259431
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataactttt 23259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 32193700 - 32193753
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttctt 32193753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 12323032 - 12322996
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataata 425  Q
    ||||||||||||||||||||||| |||||||||||||    
T  12323032 aaaatgaatgtcactttcagtttccaatgcaataata 12322996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 19600376 - 19600471
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttct 434  Q
    |||||| ||||||||||||||| ||||| |||||         |||||| ||||||||  ||||||| ||||||| |||||||||||| |||||||    
T  19600376 tactccatccgttttaaaatgattgtcgttttagacaaaataattgtttcaaaatgaagatcactttaagttttctatgcaataataattttttct 19600471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 34439319 - 34439353
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||||||||||||||||||||||||||| |||||    
T  34439319 atactccttccgttttaaaatgagtgtcgttttag 34439353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 435
Target Start/End: Complemental strand, 34513739 - 34513705
Alignment:
Q  401 actttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| |||||||||||||||||||||||    
T  34513739 actttcagtttccaatgcaataataactttttctt 34513705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 17828294 - 17828347
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||| | ||| ||| ||||||| |||||||| ||||||||    
T  17828294 ttgttttaaaatgaatgttattttaagtattcaatgtaataataattttttctt 17828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 435
Target Start/End: Complemental strand, 1502893 - 1502841
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| ||||||| ||||||||| |||||||||| ||| | ||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttctt 1502841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 3988881 - 3988845
Alignment:
Q  399 tcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  3988881 tcactttcagtttccaatgcaataataattttttctt 3988845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 26669294 - 26669262
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgcttta 371  Q
    |||||| ||||||||||||||||||||||||||    
T  26669294 tactccatccgttttaaaatgagtgtcgcttta 26669262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 7316989 - 7317079
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  7316989 tccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 7317079  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 26660753 - 26660806
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26660806  T

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Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 26932346 - 26932399
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttctt 26932399  T

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Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 39566181 - 39566234
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39566234  T

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Target: chr5; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 10345133 - 10345034
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn--ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||| ||||||||||||||||||||          |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10345133 atactccctccgtttcaaaatgagtgtcgctttagccaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 10345034  T

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Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 27797782 - 27797832
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27797782 ttttaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 27797832  T

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Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 338 - 435
Target Start/End: Complemental strand, 3306208 - 3306111
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| ||||||||||||||||||||  |||||         || ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  3306208 atactccctccgttttaaaatgagtgtcattttagtcaaaaaaattattttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 3306111  T

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Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 6518974 - 6519027
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttctt 6519027  T

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Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 7580024 - 7579971
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7580024 ttgttttaaaatgaatgttactttcagttttcaatacaataataactttttctt 7579971  T

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Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 15167164 - 15167115
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 15167115  T

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Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 339 - 420
Target Start/End: Complemental strand, 21375849 - 21375768
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaa 420  Q
    |||||||||||||| ||||||||||||| ||||||        |||||||||||| ||||||||||||||||||||||||||    
T  21375849 tactccttccgtttcaaaatgagtgtcgttttagccaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaa 21375768  T

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Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 42104218 - 42104165
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 42104165  T

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Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 42978257 - 42978176
Alignment:
Q  346 tccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    ||||||||||||||||||||| ||||||         ||||||||||||||| |||||||||||||||||||||||||||||    
T  42978257 tccgttttaaaatgagtgtcgttttagctaaaaaaaatgttttaaaatgaatatcactttcagttttcaatgcaataataac 42978176  T

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Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 4630866 - 4630916
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  4630866 ttttaaaataaatgtcactttcagttttcaatacaataataactttttctt 4630916  T

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Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 14620642 - 14620596
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14620642 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 14620596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 35766048 - 35766002
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  35766048 aaaatgaatgtcactttcagttttcaatacaataataactttttctt 35766002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 39504720 - 39504774
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaa-taataactttttctt 435  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttctt 39504774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 43584532 - 43584482
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttt 43584482  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 2729941 - 2729888
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttctt 2729888  T

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Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 3025086 - 3025033
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttctt 3025033  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 13761555 - 13761608
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttctt 13761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 21319465 - 21319412
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttctt 21319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 38362291 - 38362243
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttt 38362243  T

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Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 26661003 - 26660961
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  26661003 ttaattaatactccctccgttttaaaatgagtgtcgctttagc 26660961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 26932596 - 26932554
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  26932596 ttaattaatactccctccgttttaaaatgagtgtcgctttagc 26932554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 435
Target Start/End: Complemental strand, 36073822 - 36073732
Alignment:
Q  345 ttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||| |||| ||        ||||||  |||||||||||| ||| | |||||||||||||||||||||||||||    
T  36073822 ttccgttttaaaatgagtgtcactttggcaaaaaaaattgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttctt 36073732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 36164888 - 36164938
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  36164888 ttttaaaatgaatgtcattttcagtttccaatgcagtaataactttttctt 36164938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 9066578 - 9066525
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||  |||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttctt 9066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 24280991 - 24281044
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 24381221 - 24381168
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttctt 24381168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 34446182 - 34446129
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| |||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttctt 34446129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 40776728 - 40776681
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  40776728 ttttaaattgaatgtcactttcatttttcaatgtaataataacttttt 40776681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 7721094 - 7721144
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||| |||||||  |||||||||||||||||||||||||    
T  7721094 ttgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt 7721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 25768584 - 25768538
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttt 431  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||    
T  25768584 ttttaaaatggatgtcactttcagttttcaatgtaatattaactttt 25768538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 39729964 - 39730010
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| | ||||||||| |||||||||||||||||||||||    
T  39729964 aaaatgaatgttattttcagtttccaatgcaataataactttttctt 39730010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 25362955 - 25362902
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttctt 25362902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 27600397 - 27600450
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||| |  |||||||||| |||||||||||||||||||||||    
T  27600397 ttgttttaaaataaatattgctttcagtttccaatgcaataataactttttctt 27600450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 31041925 - 31041970
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||    
T  31041925 ttgtattaaaatgattgtcactttcagtttccaatgcaataataac 31041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 38369871 - 38369923
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| ||||||| | ||| |||||||||||||||||||||||    
T  38369871 ttgttttaaaatgaatatcactttta-tttccaatgcaataataactttttctt 38369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 429
Target Start/End: Complemental strand, 8336557 - 8336517
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  8336557 aaaatgaatgtcacttccatttttcaatgcaataataactt 8336517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 34972560 - 34972596
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34972560 aatactccctccgttttaaaatgagtgtcgctttagc 34972596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 372
Target Start/End: Complemental strand, 39504969 - 39504933
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||||||| |||||||||||||||||||||||||||    
T  39504969 taatactccatccgttttaaaatgagtgtcgctttag 39504933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 34209052 - 34208999
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttc---aatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||||| |   |||||||||||||||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttt 34208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 11977593 - 11977639
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| |||||||||||||||||| |||| | ||||||||||||||||    
T  11977593 aaaacgaatgtcactttcagtttccaataccataataactttttctt 11977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 15566452 - 15566486
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  15566452 tactccctccgttttaaaatgagtgtcgctttagc 15566486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 427
Target Start/End: Original strand, 31055738 - 31055780
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataac 427  Q
    ||||||||||||||||||| ||| |||||||| ||||||||||    
T  31055738 ttttaaaatgaatgtcactctcaattttcaattcaataataac 31055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 843027 - 843060
Alignment:
Q  390 aaatgaatgtcactttcagttttcaatgcaataa 423  Q
    |||||||||||||||||||||| |||||||||||    
T  843027 aaatgaatgtcactttcagtttgcaatgcaataa 843060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 4911305 - 4911252
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||||||||||| ||||| ||||| ||||||| |||||||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttctt 4911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 17674160 - 17674241
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttag-cnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaat 416  Q
    ||||||||| |||||||||||||||||||| |||||| |        |||||| |||||||||||||||||  |||||||||    
T  17674160 taatactccctccgttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtcactttacgttttcaat 17674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 36296338 - 36296297
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||| |||||||  |||||||||||||||||||||||||||    
T  36296338 ttaataaatactctatccgttttaaaatgagtgtcgctttag 36296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 403 - 435
Target Start/End: Original strand, 14005911 - 14005943
Alignment:
Q  403 tttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| |||||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctt 14005943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 14979960 - 14979996
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  14979960 taatactccctccgtttcaaaatgagtgtcgctttag 14979996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 433
Target Start/End: Original strand, 24281098 - 24281146
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||||||||| ||||||| |||||| |||||| |||||| ||||||    
T  24281098 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttc 24281146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 433
Target Start/End: Complemental strand, 24381113 - 24381065
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||||||||| ||||||| |||||| |||||| |||||| ||||||    
T  24381113 ttttaaaatgaatatcacttttagtttttaatgcactaataattttttc 24381065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 33693973 - 33693937
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  33693973 aatactccttccgttttaaaataagtgtcgttttagc 33693937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 3965 - 3912
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 3733 - 3766
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||||||||||||||||||||||||| |||||    
T  3733 tactccttccgttttaaaatgagtgtcgttttag 3766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 4505291 - 4505388
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| ||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4505291 tactccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 4505388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 435
Target Start/End: Original strand, 19878602 - 19878699
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| || |||| ||||||||||||| ||||||        |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19878602 atactccctctgtttcaaaatgagtgtcgttttagcaaaaaaaattgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19878699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 45043747 - 45043694
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 45043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 37624511 - 37624607
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||| |||||||||| |||||||||        |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  37624511 tactccctccgtttcaaaatgagtgacgctttagcaaaaaaaattgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttctt 37624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 435
Target Start/End: Original strand, 25231127 - 25231226
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||| ||| ||| ||||||||||||||||||||||||         |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  25231127 aatagtccatcctttttaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttctt 25231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 19451370 - 19451317
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 19451317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 20448037 - 20448090
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttctt 20448090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 52957949 - 52957896
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 52957896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 1819517 - 1819613
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||| ||| ||||||||||||| ||||||        |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  1819517 tactccatccatttcaaaatgagtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttctt 1819613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 435
Target Start/End: Original strand, 50203032 - 50203125
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  50203032 tactccatccgttttaaaatgagtgtcgttttagcaaaaaaa-ttgttttaaaatgaatgtcactttcag--tccaatgcaataataactttttctt 50203125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 52915748 - 52915648
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttct 434  Q
    ||||||||| |||| || ||||||||||||||||||||         |||||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  52915748 taatactccatccgattcaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttct 52915649  T
Q  435 t 435  Q
    |    
T  52915648 t 52915648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 56460082 - 56460134
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctt 56460134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 6991417 - 6991367
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  6991417 ttttaaaatgaatgtcactttcagttttcaatacaataataattttttctt 6991367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 39982108 - 39982154
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  39982108 aaaatgaatgtcactttcagtttccaatgcaataataactttttctt 39982154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 49089462 - 49089512
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt 49089512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 40345506 - 40345453
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 40345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 44572024 - 44571971
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttctt 44571971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 46392260 - 46392167
Alignment:
Q  342 tccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||| ||||||        || ||||||||||  ||||||||||| ||||||| |||||||||| ||||||||    
T  46392260 tccttccgttttaaaatgagtgtcgttttagctaaaaaaattattttaaaatggctgtcactttcacttttcaaagcaataataattttttctt 46392167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 52253843 - 52253896
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctt 52253896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 52848213 - 52848160
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttctt 52848160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 21864537 - 21864489
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21864537 ttaaaatgaatgttactttcagtttccaatgcaataataactttttctt 21864489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 21920398 - 21920350
Alignment:
Q  387 ttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21920398 ttaaaatgaatgttactttcagtttccaatgcaataataactttttctt 21920350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 22220564 - 22220465
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| |||||||| ||||||||||| |||||||         |||||| ||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  22220564 aatactccctccgttttgaaatgagtgtcactttagcaaaaaaaaattgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttctt 22220465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 27943705 - 27943658
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataactt 27943658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 2728550 - 2728504
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  2728550 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 2728504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 29370604 - 29370654
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  29370604 ttttaaaataaatgtcactttcagttttcaatataataataactttttctt 29370654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 338 - 432
Target Start/End: Complemental strand, 29519728 - 29519634
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||| ||||||||||||||||| | |||| |        |||||| ||||| ||||||||||| ||||| ||||||||||||||||||||    
T  29519728 atactcctttcgttttaaaatgagtgttgttttatctaaaaaaattgtttcaaaataaatgtcacttttagtttccaatgcaataataacttttt 29519634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Original strand, 40837128 - 40837178
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt 40837178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 49080635 - 49080586
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  49080635 ttgtttcaaaatgaatgtcactttcagtttt-aatgcaataataacttttt 49080586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 50621339 - 50621293
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  50621339 aaaataaatgtcactttaagttttcaatgcaataataactttttctt 50621293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 8971040 - 8971093
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| ||||||||    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttctt 8971093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 10573313 - 10573260
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttctt 10573260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 19930712 - 19930765
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||| ||| | |||||||||||||||||||||    
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttctt 19930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 30261257 - 30261310
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||  |||||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttctt 30261310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 41496203 - 41496256
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||||||||||||||    
T  41496203 ttgtttcaaaataaatctcactttcagttttcaatacaataataactttttctt 41496256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 41920468 - 41920415
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttctt 41920415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 47817736 - 47817789
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||| | ||||||||||| |||||||||||||||||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttctt 47817789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 50623081 - 50623134
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||||||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttctt 50623134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 51733653 - 51733600
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||  ||||||||||||| ||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctt 51733600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 54042342 - 54042289
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttctt 54042289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 33033076 - 33033120
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 426  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataa 33033120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 34316223 - 34316270
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||||    
T  34316223 ttttaaaataaatgtcactttcagtttccaatgcaataataatttttt 34316270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 40011033 - 40010986
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactt 429  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaactt 40010986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 385 - 432
Target Start/End: Original strand, 52162107 - 52162154
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  52162107 ttttaaaatgaatgtcactttcaattttcaacgcaataataatttttt 52162154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 7906148 - 7906102
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  7906148 aaaatgaatgtcactttcagtttccggtgcaataataactttttctt 7906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 371
Target Start/End: Complemental strand, 19282615 - 19282581
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgcttta 371  Q
    |||||||||||||||||||||||||||||||||||    
T  19282615 aatactccttccgttttaaaatgagtgtcgcttta 19282581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 2493100 - 2493153
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||| |||||||||| ||| |||||||||||||| ||||||||    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttctt 2493153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 24940877 - 24940930
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttctt 24940930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 31917954 - 31918007
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||| |||||||||| || |||||||||||||  ||||||||    
T  31917954 ttgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttctt 31918007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 37654408 - 37654460
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||||    
T  37654408 ttgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttctt 37654460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 435
Target Start/End: Complemental strand, 38991974 - 38991867
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttca---gttttcaatgcaataataac 427  Q
    ||||| |||||||| ||||||| ||||||| ||||| | ||||        ||||||||||| |||||||| |||||   |||| |||||||||||||||    
T  38991974 ttaataaatactccatccgtttcaaaatgattgtcgttatagccaaaaaaattgttttaaaacgaatgtcaatttcatcggtttccaatgcaataataac 38991875  T
Q  428 tttttctt 435  Q
    ||||||||    
T  38991874 tttttctt 38991867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 44061006 - 44061059
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||||||||||||| |||  ||| ||||||||||||||||||    
T  44061006 ttgttttataatgaatgtcactttcattttctaatacaataataactttttctt 44061059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 45839636 - 45839685
Alignment:
Q  383 tgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||||||||||||||||||||  ||| |||||||||||||||    
T  45839636 tgttttgaaatgaatgtcactttcagtttctaatacaataataacttttt 45839685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 372
Target Start/End: Original strand, 38510166 - 38510205
Alignment:
Q  333 aattaatactccttccgttttaaaatgagtgtcgctttag 372  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  38510166 aattaatactccatccgttttaaaatgagtgtcgttttag 38510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 435
Target Start/End: Complemental strand, 38510448 - 38510351
Alignment:
Q  342 tccttccgttttaaaatgagtgtcgctttagcnnnnnnnn-ttgttttaaaatgaatgtcac---tttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| ||||||||         ||||||| |||||||| |||    ||| |||||||||||||||||||||||||||||    
T  38510448 tccttccgttttaaaatgagtgtagctttagcaaaaaaaaattgttttgaaatgaatatcatcatttttagttttcaatgcaataataactttttctt 38510351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 53814649 - 53814606
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||    
T  53814649 aaaatgaatgtcacttttagttaacaatgcaataataacttttt 53814606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 373
Target Start/End: Original strand, 2728310 - 2728348
Alignment:
Q  335 ttaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  2728310 ttaatactccatccgtttcaaaatgagtgtcgctttagc 2728348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 19282315 - 19282357
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||  |||||||||||||||| |||||||||||    
T  19282315 ttaattaatactcgatccgttttaaaatgagcgtcgctttagc 19282357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 34413706 - 34413656
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||| ||||| ||||||||||||| |||  |||||||||||||||||||    
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataacttttt 34413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 423
Target Start/End: Original strand, 44650893 - 44650927
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataa 423  Q
    |||||||| ||||||||||||||||||||||||||    
T  44650893 aaaatgaacgtcactttcagttttcaatgcaataa 44650927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 55126744 - 55126702
Alignment:
Q  331 ttaattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||    
T  55126744 ttaattaatactccatccgttttaaaatgaatgtcgttttagc 55126702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 371
Target Start/End: Original strand, 56556192 - 56556226
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgcttta 371  Q
    |||||||| ||||||||||||||||||||||||||    
T  56556192 aatactccctccgttttaaaatgagtgtcgcttta 56556226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 11364224 - 11364277
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||| |||||||  |||||| ||||| |||| |||||||||||||||||    
T  11364224 ttgttttaagatgaatgatactttcggtttttaatgaaataataactttttctt 11364277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 28116189 - 28116230
Alignment:
Q  332 taattaatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||||||  ||||||| ||||||||||||||||||||    
T  28116189 taattaatactcaatccgtttcaaaatgagtgtcgctttagc 28116230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 54042095 - 54042132
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  54042095 taatactccatccgttttaaaatgagtgtcgttttagc 54042132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 411
Target Start/End: Complemental strand, 56555861 - 56555832
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttt 411  Q
    ||||||||||||||||||||||||||||||    
T  56555861 ttgttttaaaatgaatgtcactttcagttt 56555832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 372
Target Start/End: Original strand, 7905920 - 7905956
Alignment:
Q  336 taatactccttccgttttaaaatgagtgtcgctttag 372  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  7905920 taatactccctccgttttaaaatgagtgtcgttttag 7905956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 25123872 - 25123832
Alignment:
Q  395 aatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttctt 25123832  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 28734596 - 28734640
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 426  Q
    |||||| | ||||||||||||||||||||| || |||||||||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataa 28734640  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 31941796 - 31941760
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  31941796 aatactccctccgtttcaaaatgagtgtcgctttagc 31941760  T

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Target: scaffold2107 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 435
Target Start/End: Complemental strand, 713 - 615
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||| ||||||| ||||||| ||||| ||||||        || ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  713 aatactccatccgtttcaaaatgaatgtcgttttagccaaaaatattattttaaaatgaatgtcactttcagtttccaatgcaataataattttttctt 615  T

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Target: scaffold0565 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 9796 - 9743
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttctt 9743  T

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Target: scaffold0565; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 432
Target Start/End: Complemental strand, 10110 - 10060
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttttt 432  Q
    |||||||||||||||||||||||||| |||||||| | ||||||| |||||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttt 10060  T

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Target: scaffold0110 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 24895 - 24842
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttctt 24842  T

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Target: scaffold0110; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 24652 - 24686
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||| ||||||||||||||||||||||||||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagc 24686  T

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Target: scaffold0502 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 723 - 673
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  723 ttttaaaatgaatgtcacttacaatttccaatgcaataataactttttctt 673  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 3652 - 3606
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  3652 aaaatgaatgtcactttcagtttccaatacaataataactttttctt 3606  T

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Target: scaffold0182 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 18402 - 18356
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18402 aaaatgaatgtcattttcagtttccaatgcaataataactttttctt 18356  T

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Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 426
Target Start/End: Complemental strand, 75492 - 75410
Alignment:
Q  344 cttccgttttaaaatgagtgtcgctttagcnnnnnnnnttgttttaaaatgaatgtcactttcagttttcaatgcaataataa 426  Q
    ||||||||||||||| ||||||| ||||||        |||||| |||||||||||||| |||||||||||| ||||||||||    
T  75492 cttccgttttaaaataagtgtcgttttagcaaaaagaattgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

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Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 1568 - 1515
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| |||||||||||||||||||||||  |||||||| |||||||||||||    
T  1568 ttgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttctt 1515  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 62631 - 62684
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| ||||||||||||||||||||||| | ||| |||||||||||||||||    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctt 62684  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 435
Target Start/End: Complemental strand, 21233 - 21183
Alignment:
Q  385 ttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  21233 ttttaaaatgactgtcactttcagtttcaaatgcaataataattttttctt 21183  T

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Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 20991 - 21027
Alignment:
Q  337 aatactccttccgttttaaaatgagtgtcgctttagc 373  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  20991 aatactccctccgttttaaaattagtgtcgctttagc 21027  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 435
Target Start/End: Original strand, 4141 - 4192
Alignment:
Q  385 ttttaaaatgaatgtcacttt-cagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| ||| || |||||||||||||||||| ||||||||    
T  4141 ttttaaaatgaatgtcatttttcaattttcaatgcaataataattttttctt 4192  T

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Target: scaffold0300 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 4570 - 4616
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    ||||||||||||||||| | |||| ||||||||||||| ||||||||    
T  4570 aaaatgaatgtcacttttaatttttaatgcaataataattttttctt 4616  T

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Target: scaffold0047 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 368
Target Start/End: Original strand, 70364 - 70394
Alignment:
Q  338 atactccttccgttttaaaatgagtgtcgct 368  Q
    |||||||||||||||||||||||||||||||    
T  70364 atactccttccgttttaaaatgagtgtcgct 70394  T

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Target: scaffold0983 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 435
Target Start/End: Complemental strand, 841 - 788
Alignment:
Q  382 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 435  Q
    |||||| | ||||||||||||||||||||| || || |||||||| ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttctt 788  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 1499 - 1531
Alignment:
Q  339 tactccttccgttttaaaatgagtgtcgcttta 371  Q
    |||||| ||||||||||||||||||||||||||    
T  1499 tactccatccgttttaaaatgagtgtcgcttta 1531  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 389 - 433
Target Start/End: Original strand, 153318 - 153362
Alignment:
Q  389 aaaatgaatgtcactttcagttttcaatgcaataataactttttc 433  Q
    ||||||||||||| ||||| ||||||||||||| |||||| ||||    
T  153318 aaaatgaatgtcattttcaattttcaatgcaatgataactatttc 153362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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