View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15352_high_6 (Length: 404)

Name: NF15352_high_6
Description: NF15352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15352_high_6
NF15352_high_6
[»] chr1 (32 HSPs)
chr1 (15-292)||(49857464-49857741)
chr1 (22-293)||(19925016-19925289)
chr1 (22-293)||(30890335-30890608)
chr1 (15-291)||(35258391-35258670)
chr1 (15-291)||(45825152-45825432)
chr1 (15-291)||(51320990-51321269)
chr1 (15-291)||(23275622-23275901)
chr1 (15-291)||(19527061-19527340)
chr1 (15-291)||(31783246-31783525)
chr1 (15-291)||(52802407-52802686)
chr1 (15-291)||(47502591-47502858)
chr1 (68-285)||(17514267-17514497)
chr1 (53-179)||(21141415-21141544)
chr1 (53-171)||(50343525-50343646)
chr1 (53-179)||(2424924-2425051)
chr1 (320-404)||(49857823-49857907)
chr1 (53-179)||(97504-97633)
chr1 (65-179)||(2365624-2365741)
chr1 (65-179)||(19156403-19156520)
chr1 (53-171)||(47656266-47656386)
chr1 (53-179)||(22524523-22524650)
chr1 (65-179)||(3731949-3732066)
chr1 (65-179)||(13639591-13639708)
chr1 (65-179)||(26876045-26876162)
chr1 (60-140)||(38127045-38127128)
chr1 (183-291)||(29622113-29622221)
chr1 (102-179)||(8474173-8474250)
chr1 (199-291)||(11183457-11183549)
chr1 (203-291)||(11196156-11196244)
chr1 (110-179)||(23935581-23935650)
chr1 (181-242)||(25147617-25147678)
chr1 (334-386)||(38127452-38127504)
[»] chr5 (19 HSPs)
chr5 (15-293)||(8701742-8702023)
chr5 (15-293)||(17658596-17658877)
chr5 (22-293)||(28241325-28241598)
chr5 (15-290)||(19228190-19228468)
chr5 (15-291)||(38968373-38968653)
chr5 (15-291)||(42537425-42537704)
chr5 (15-291)||(512290-512569)
chr5 (15-291)||(7757600-7757879)
chr5 (15-291)||(42942005-42942283)
chr5 (18-291)||(8580027-8580302)
chr5 (18-258)||(28876952-28877194)
chr5 (68-291)||(14260-14486)
chr5 (56-293)||(20422213-20422463)
chr5 (56-258)||(40624473-40624688)
chr5 (53-179)||(5197361-5197490)
chr5 (65-179)||(19040685-19040802)
chr5 (68-179)||(27673224-27673338)
chr5 (65-179)||(30705524-30705641)
chr5 (325-385)||(17658392-17658452)
[»] chr7 (27 HSPs)
chr7 (22-293)||(15073754-15074027)
chr7 (15-290)||(14689576-14689854)
chr7 (22-293)||(42507553-42507826)
chr7 (15-290)||(47672603-47672881)
chr7 (15-292)||(36977873-36978153)
chr7 (15-291)||(9494314-9494592)
chr7 (15-291)||(39460804-39461083)
chr7 (15-258)||(17835385-17835631)
chr7 (15-258)||(37340613-37340859)
chr7 (15-291)||(10517256-10517535)
chr7 (15-291)||(47776610-47776889)
chr7 (15-291)||(27453137-27453416)
chr7 (15-291)||(34738642-34738921)
chr7 (68-293)||(17741019-17741257)
chr7 (56-179)||(556205-556331)
chr7 (53-176)||(5541096-5541222)
chr7 (65-179)||(41880878-41880995)
chr7 (65-179)||(48403745-48403862)
chr7 (53-167)||(16675186-16675303)
chr7 (53-167)||(17649554-17649671)
chr7 (65-179)||(35609984-35610101)
chr7 (53-171)||(46740103-46740224)
chr7 (65-179)||(45257376-45257492)
chr7 (102-179)||(17465329-17465406)
chr7 (102-179)||(17587808-17587885)
chr7 (65-179)||(9370958-9371071)
chr7 (320-382)||(14689986-14690048)
[»] chr8 (34 HSPs)
chr8 (15-258)||(5303739-5303985)
chr8 (22-293)||(489155-489428)
chr8 (44-293)||(42485086-42485337)
chr8 (15-291)||(34822535-34822814)
chr8 (15-291)||(39846504-39846783)
chr8 (29-291)||(39601991-39602256)
chr8 (15-258)||(43211814-43212060)
chr8 (15-291)||(43188325-43188604)
chr8 (15-291)||(39938734-39939013)
chr8 (15-258)||(15036246-15036492)
chr8 (15-291)||(40076777-40077047)
chr8 (53-291)||(39252288-39252528)
chr8 (15-291)||(41249607-41249870)
chr8 (53-293)||(24249757-24249999)
chr8 (18-291)||(45064517-45064782)
chr8 (15-179)||(2984510-2984677)
chr8 (61-187)||(37327163-37327292)
chr8 (53-179)||(35552053-35552182)
chr8 (163-291)||(25864609-25864736)
chr8 (53-179)||(20857673-20857802)
chr8 (58-179)||(45128137-45128261)
chr8 (65-179)||(25095-25212)
chr8 (65-179)||(1052912-1053029)
chr8 (53-179)||(5677458-5677587)
chr8 (65-179)||(23021889-23022006)
chr8 (65-179)||(26659834-26659951)
chr8 (53-152)||(34371450-34371552)
chr8 (206-258)||(37327112-37327164)
chr8 (121-261)||(22495213-22495363)
chr8 (53-88)||(34370133-34370168)
chr8 (370-403)||(42605258-42605291)
chr8 (61-89)||(2984681-2984709)
chr8 (15-51)||(24249992-24250028)
chr8 (15-51)||(39252521-39252557)
[»] chr4 (39 HSPs)
chr4 (15-291)||(51683478-51683757)
chr4 (22-293)||(1089110-1089383)
chr4 (22-293)||(1308640-1308913)
chr4 (22-293)||(30726267-30726540)
chr4 (15-291)||(48256089-48256368)
chr4 (15-291)||(55407305-55407584)
chr4 (15-291)||(50275010-50275289)
chr4 (15-293)||(21022407-21022687)
chr4 (15-258)||(37021601-37021847)
chr4 (27-293)||(14315648-14315927)
chr4 (61-291)||(67867-68100)
chr4 (15-291)||(50901756-50902034)
chr4 (18-291)||(40357802-40358077)
chr4 (47-293)||(14297399-14297658)
chr4 (15-290)||(21537979-21538258)
chr4 (53-292)||(10752983-10753235)
chr4 (53-292)||(10966752-10967004)
chr4 (61-258)||(46436553-46436753)
chr4 (53-293)||(11083562-11083815)
chr4 (15-179)||(11050041-11050208)
chr4 (53-179)||(50023099-50023228)
chr4 (53-179)||(41933179-41933308)
chr4 (53-179)||(50030217-50030346)
chr4 (65-179)||(41798563-41798680)
chr4 (65-179)||(9892836-9892953)
chr4 (68-289)||(4719949-4720163)
chr4 (53-179)||(3184344-3184473)
chr4 (53-179)||(3185440-3185569)
chr4 (53-179)||(3185648-3185777)
chr4 (65-179)||(6181358-6181475)
chr4 (61-171)||(30704419-30704532)
chr4 (65-179)||(49090808-49090925)
chr4 (65-179)||(49165421-49165538)
chr4 (53-171)||(44679631-44679752)
chr4 (65-179)||(31422085-31422203)
chr4 (64-152)||(50193894-50193985)
chr4 (334-384)||(11051371-11051421)
chr4 (61-89)||(21537947-21537975)
chr4 (371-403)||(51644498-51644530)
[»] chr6 (16 HSPs)
chr6 (15-291)||(6320081-6320360)
chr6 (15-291)||(24088300-24088579)
chr6 (15-241)||(31769031-31769260)
chr6 (27-293)||(3381047-3381315)
chr6 (68-179)||(21600992-21601106)
chr6 (53-179)||(3501557-3501686)
chr6 (53-171)||(24722324-24722445)
chr6 (53-171)||(26423393-26423514)
chr6 (65-179)||(6201536-6201653)
chr6 (65-179)||(11688503-11688620)
chr6 (65-179)||(22301568-22301685)
chr6 (65-179)||(30829220-30829337)
chr6 (65-171)||(27617111-27617220)
chr6 (203-288)||(30424143-30424228)
chr6 (320-383)||(3380855-3380918)
chr6 (334-386)||(24721987-24722039)
[»] chr3 (37 HSPs)
chr3 (15-291)||(42756429-42756706)
chr3 (15-242)||(42805780-42806010)
chr3 (15-291)||(49195965-49196244)
chr3 (20-291)||(20917540-20917814)
chr3 (20-291)||(20926502-20926776)
chr3 (15-291)||(30255520-30255799)
chr3 (15-291)||(42165438-42165717)
chr3 (15-291)||(4007841-4008120)
chr3 (15-291)||(44229989-44230268)
chr3 (15-291)||(47073725-47074004)
chr3 (15-291)||(50963230-50963508)
chr3 (17-291)||(50216398-50216675)
chr3 (15-291)||(3975982-3976261)
chr3 (15-291)||(48889019-48889289)
chr3 (15-193)||(48563301-48563482)
chr3 (62-291)||(597034-597266)
chr3 (96-291)||(3501494-3501689)
chr3 (123-291)||(51807245-51807413)
chr3 (100-289)||(31045200-31045388)
chr3 (53-179)||(16611465-16611594)
chr3 (53-179)||(22047659-22047788)
chr3 (52-179)||(17567619-17567749)
chr3 (53-179)||(41612755-41612884)
chr3 (65-179)||(52390964-52391081)
chr3 (53-171)||(20351040-20351161)
chr3 (65-179)||(2274482-2274599)
chr3 (65-179)||(29009247-29009364)
chr3 (53-179)||(36127824-36127953)
chr3 (65-179)||(42903758-42903875)
chr3 (65-179)||(46389349-46389466)
chr3 (65-179)||(50480352-50480469)
chr3 (65-179)||(54386511-54386628)
chr3 (65-179)||(49144031-49144147)
chr3 (68-171)||(4178199-4178305)
chr3 (65-179)||(34045764-34045880)
chr3 (65-179)||(46701593-46701710)
chr3 (213-291)||(48563219-48563297)
[»] scaffold0180 (1 HSPs)
scaffold0180 (15-291)||(15141-15420)
[»] chr2 (26 HSPs)
chr2 (15-291)||(39947876-39948155)
chr2 (15-258)||(32955877-32956118)
chr2 (18-291)||(28468917-28469192)
chr2 (15-291)||(45428867-45429145)
chr2 (22-291)||(21998466-21998737)
chr2 (22-291)||(17420843-17421114)
chr2 (96-291)||(25965096-25965291)
chr2 (115-291)||(7185305-7185481)
chr2 (53-179)||(25515366-25515494)
chr2 (53-179)||(29401160-29401289)
chr2 (15-158)||(45136821-45136956)
chr2 (53-179)||(36655906-36656035)
chr2 (59-179)||(45284560-45284683)
chr2 (59-179)||(45291923-45292046)
chr2 (53-179)||(10828581-10828710)
chr2 (65-179)||(20938284-20938401)
chr2 (165-291)||(45137103-45137229)
chr2 (18-86)||(22686863-22686930)
chr2 (65-179)||(3940297-3940414)
chr2 (65-179)||(5352353-5352470)
chr2 (65-179)||(15831516-15831633)
chr2 (65-179)||(30496515-30496632)
chr2 (65-179)||(43978908-43979025)
chr2 (203-288)||(35464313-35464398)
chr2 (65-171)||(43539306-43539415)
chr2 (181-288)||(31367308-31367415)
[»] scaffold0293 (1 HSPs)
scaffold0293 (18-291)||(250-525)
[»] scaffold0634 (1 HSPs)
scaffold0634 (63-291)||(7694-7925)
[»] scaffold0101 (1 HSPs)
scaffold0101 (205-293)||(40746-40834)
[»] scaffold0238 (1 HSPs)
scaffold0238 (53-179)||(18489-18618)
[»] scaffold0155 (2 HSPs)
scaffold0155 (61-160)||(10761-10863)
scaffold0155 (184-291)||(8479-8586)
[»] scaffold0007 (2 HSPs)
scaffold0007 (109-289)||(251091-251270)
scaffold0007 (99-141)||(246180-246222)
[»] scaffold0877 (2 HSPs)
scaffold0877 (53-179)||(4210-4339)
scaffold0877 (326-386)||(4600-4660)


Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 15 - 292
Target Start/End: Original strand, 49857464 - 49857741
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaac 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49857464 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaac 49857563  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49857564 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaacaactacattcat 49857663  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactca 292  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  49857664 ttatcaaaacataaactacacatgcaatgataaaattatcaattcatttataaaacctaaccacatgcaaactactca 49857741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 19925289 - 19925016
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||    
T  19925289 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactt 19925191  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||    
T  19925190 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttat 19925091  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19925090 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 19925016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 293
Target Start/End: Complemental strand, 30890608 - 30890335
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||    
T  30890608 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactt 30890510  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||    
T  30890509 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttat 30890410  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30890409 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 30890335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 35258391 - 35258670
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  35258391 aatatacacttaatcaaactataattaacatcatttctatcatttctataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 35258490  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||    
T  35258491 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactaaatt 35258590  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  35258591 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 35258670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 45825432 - 45825152
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  45825432 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaattaactaaataatcaatataattttcattgaggcatttgatca 45825333  T
Q  112 aacactttgtgtgcaaa-gtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacat 210  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||    
T  45825332 aacactttgtgtgcaaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacat 45825233  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  45825232 tcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 45825152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 51321269 - 51320990
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  51321269 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 51321170  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| |||||| | |||||||||| |||| |||||||||||||    
T  51321169 aacactttgtgtgcaaaatataaaacatattcaaattgtgttcatttgccactattcaaagtcacattatgatttaaacaatataggcaacaactacatt 51321070  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  51321069 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 51320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 23275622 - 23275901
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||   |||||||||||||||    
T  23275622 aatatacacttaaccaaactata-ttaacatcatttctatcatttccataacttaaactgactaaataatcaatataattttcattgaggcatttgatca 23275720  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc-attcaaagccacattctcatttaaacaacatagacaacaactacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||| | ||||||||||||||| ||||||||||||    
T  23275721 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcacccattcaaagtcacattatgatttaaacaacataggcaacaactacat 23275820  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||| |   || || ||||||||||||||||||||||    
T  23275821 tcatttatcaattcataaactacacatgcaatcatcaaattgtcaatttaaaaatcaaccctaaccacatgcaaactactc 23275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 19527061 - 19527340
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttt---gaggcatttgatca 111  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| |||| ||   ||||||||| ||||    
T  19527061 aatatacacttaaccaaactataactaacatcatttctatcattttcataacctaaattaactacataatcaataaaattgttattgaggcattttatca 19527160  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  19527161 aacactttgtgtgcaaaacataaaacatattcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 19527260  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||||     || || | ||||||||||||||||||||    
T  19527261 catttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactc 19527340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 31783246 - 31783525
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  31783246 aatatacacttaaccaaactataattaacatcatttatatcatttccataatctaaactaactaaataatcaataaaattgtcattgaggcattttatca 31783345  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||||||| |||||||||||||    
T  31783346 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaagaacataggcaacaactacatt 31783445  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
     |||||||||| | |||||||||||| |||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  31783446 tatttatcaattcctaaactacacatacaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 31783525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 52802686 - 52802407
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||| |   |||| ||||| ||||    
T  52802686 aatatacacttaaccaaactataattaacatcatttctatcatttccatagcctaaactaactaaacaatcaataaaattgtcattgagacattttatca 52802587  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||  |||||| | | ||||||||||||  |||||||||||||    
T  52802586 aacactttgtgtgcaaagtataaaagatattcaaattgtgttattttgccaccattcaaaatcacattatgacttaaacaacataagcaacaactacatt 52802487  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  52802486 catttatcaattcttaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 52802407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 47502858 - 47502591
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||         |||||   |||||||||||||||||| |||| |   |||||||||| | ||    
T  47502858 aatatacacttaaccaaactataattaacatcatttctat---------aacct---ctaactaaataatcaataaaattgtcattgaggcattttacca 47502771  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  47502770 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 47502671  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | |||| |||||||||||| || ||||||||||||     || ||  |||||||||||||||||||||    
T  47502670 catttatcaattcctaaattacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactc 47502591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 17514267 - 17514497
Alignment:
Q  68 taaactaactaaataatcaatataatttttga---ggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc 164  Q
    |||| |||||||||||||||||||||||||     ||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||||| ||||    
T  17514267 taaattaactaaataatcaatataatttttatttgggcattttatcaaacactttgtgtgcaaagaatcaaacatattcaaattgtgttcatttggcacc 17514366  T
Q  165 attcaaagccacatt----------ctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtc 254  Q
    ||||||| |||||||           ||||||||||| ||   |||||||||| |||||||||||||| ||||||||||||| | |||  | ||| ||||    
T  17514367 attcaaaaccacattatacttatacatcatttaaacatcaattacaacaactatattcatttatcaattcataaactacacacgtaatcttcaaaatgtc 17514466  T
Q  255 aattcatttataaaacctaaccacatgcaaa 285  Q
    |||||||||||||| ||||||||||||||||    
T  17514467 aattcatttataaaccctaaccacatgcaaa 17514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 21141544 - 21141415
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  21141544 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 21141445  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  21141444 tgatcttttgccaccattcaaaaccacatt 21141415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 50343525 - 50343646
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  50343525 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50343624  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||| | ||||||||||||||||    
T  50343625 tgttcttttgccaccattcaaa 50343646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 2424924 - 2425051
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataattttt---gaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||| ||||||||||||| |||| ||   ||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  2424924 atcatatccataacctaaactaaataaataatcaataaaattgttattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattg 2425021  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    |||  ||||| | |||||| || |||||||    
T  2425022 tgtttatttggctccattccaaaccacatt 2425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 320 - 404
Target Start/End: Original strand, 49857823 - 49857907
Alignment:
Q  320 aaagaagaaactgcaaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaactgcagccgatttttgaattca 404  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||| ||||||| ||||||    
T  49857823 aaagaagaaactgcaaaactgaatttctgtttctgaatatgttcagcacgcctcggcagttaactgcagctgatttttaaattca 49857907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 97504 - 97633
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| |   ||||||||||  ||||||||||||||| |||||||| ||||||| ||||| ||    
T  97504 atcatatccataacctaaactaactaaataaacaataaaattatcattgaggcattttctcaaacactttgtgtacaaagtatcaaacatactcaaaatg 97603  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  97604 tgatcttttgccaccattcaaaaccacatt 97633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 2365741 - 2365624
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||||    
T  2365741 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 2365642  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  2365641 accattcaaaaccacatt 2365624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 19156520 - 19156403
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||||    
T  19156520 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 19156421  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  19156420 accattcaaaaccacatt 19156403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 47656386 - 47656266
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  47656386 atcatatccataacc-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 47656288  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||| | ||||||||||||||||    
T  47656287 tgttcttttgccaccattcaaa 47656266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 22524650 - 22524523
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||| | ||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||||||||  |||||||||     
T  22524650 atcatatccatgatctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaatta 22524553  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    |||  ||||| | |||||| || |||||||    
T  22524552 tgtttatttggctccattccaaaccacatt 22524523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 3731949 - 3732066
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  3731949 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 3732048  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  3732049 accaatcaaaaccacatt 3732066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 13639591 - 13639708
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  13639591 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 13639690  T
Q  162 accattcaaagccacatt 179  Q
    || ||||||| |||||||    
T  13639691 acaattcaaaaccacatt 13639708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 26876162 - 26876045
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  26876162 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 26876063  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  26876062 accaatcaaaaccacatt 26876045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 140
Target Start/End: Original strand, 38127045 - 38127128
Alignment:
Q  60 ccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 140  Q
    |||||||||||||||||||| ||||||||| ||||||   |||| ||||| ||||||||||||||||||||||||| |||||||    
T  38127045 ccataacctaaactaactaagtaatcaataaaattttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacata 38127128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 29622113 - 29622221
Alignment:
Q  183 atttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgc 282  Q
    ||||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||| || ||||| ||||||     || || ||||||||||| |    
T  29622113 atttaaacaacataggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatac 29622212  T
Q  283 aaactactc 291  Q
    |||||||||    
T  29622213 aaactactc 29622221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 8474250 - 8474173
Alignment:
Q  102 catttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   |||||||||| ||||| |||||||    
T  8474250 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccaatcaaaaccacatt 8474173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 11183549 - 11183457
Alignment:
Q  199 caacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||| || ||||||||||||     || ||  |||||||||||||||||||||    
T  11183549 caacaactacattaatttatcaattcataaactacacatgtaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactc 11183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 11196244 - 11196156
Alignment:
Q  203 aactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||| |||||||||| ||||||||||||||||||| || ||| ||||||||     || || ||||||||||||||||||||||    
T  11196244 aactacattaatttatcaattcataaactacacatgcaatcatcaaaatgtcaattttaaaatcaaccctaaccacatgcaaactactc 11196156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 23935581 - 23935650
Alignment:
Q  110 caaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    ||||||||||| ||||||||||| |||| ||||   |||||||  ||||| ||||||||||| |||||||    
T  23935581 caaacactttgagtgcaaagtatgaaacttattaccattgtgttaatttgacaccattcaaaaccacatt 23935650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 25147678 - 25147617
Alignment:
Q  181 tcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaat 242  Q
    |||||||||||||||  ||| ||||||||||||| ||| |   |||||||||||||||||||    
T  25147678 tcatttaaacaacattcacatcaactacattcatctataacatcataaactacacatgcaat 25147617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 38127452 - 38127504
Alignment:
Q  334 aaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaactgc 386  Q
    |||||||| ||| ||||||||  |||| |||||||||||||| ||||||||||    
T  38127452 aaaactgagtttttgtttctgtttatgttcagcacgcatcggcagttaactgc 38127504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 228; Significance: 1e-125; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 15 - 293
Target Start/End: Original strand, 8701742 - 8702023
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   |||||||||||||||    
T  8701742 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaacaaactaaataatcaatataattttcattgaggcatttgatca 8701841  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||  |||| ||||||||    
T  8701842 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaactactacatt 8701941  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8701942 catttatcaattcataaactacacatgcaatcatcaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 8702023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 15 - 293
Target Start/End: Complemental strand, 17658877 - 17658596
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  17658877 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 17658778  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||| | |||||||||||    
T  17658777 aacactttgtatgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggccacaactacatt 17658678  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  17658677 catttatcaataaataaactacacatgcaatgatgaaattgtcaattcatttatcaaacctaaccacatacaaactactcaa 17658596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 28241325 - 28241598
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||    
T  28241325 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactt 28241423  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||    
T  28241424 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttat 28241523  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28241524 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 28241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 19228190 - 19228468
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  19228190 aatatacacttaatcaaactataattaacatcatttttatcattttcataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 19228289  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  19228290 aacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 19228389  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactact 290  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || |||||||||||||||||||||    
T  19228390 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 19228468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 38968653 - 38968373
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattt---ttgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  38968653 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 38968554  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattca-aagccacattctcatttaaacaacatagacaacaactacat 210  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| | |||| |||||||||| ||||||||||||    
T  38968553 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcataagtcacattatgattttaacaacataggcaacaactacat 38968454  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||     ||||| ||||||||||||||||||||||    
T  38968453 tcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaataaaccctaaccacatgcaaactactc 38968373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 42537704 - 42537425
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  42537704 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataaatttcattgaggcatttgatca 42537605  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||    
T  42537604 aacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacatt 42537505  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || |||||| |||||||||||||||    
T  42537504 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaacaacatgcaaactactc 42537425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 512290 - 512569
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||   ||||| |||||||||    
T  512290 aatatacacttaactaaactataattaacatcatttctataattttcataacctaaactaactaaataagcaatataattttcattgaggtatttgatca 512389  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  512390 aacactttgggtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacatt 512489  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  512490 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 512569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 7757879 - 7757600
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  7757879 aatatacacttaaccaaactataatttctatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 7757780  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||    
T  7757779 aacactttgtgtgcaaagtataaaacatgttcaaattgtgttcatttgccaccattcaaaaccacattataatttaaacaacataggcaacaactacatt 7757680  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  7757679 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 7757600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 42942005 - 42942283
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |   |||||||||| ||||    
T  42942005 aatatacacttaaccagactataattaacatcatttctatcatttccataacctaaactaactaaa-aatcaataaaattgtcattgaggcattttatca 42942103  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||| | ||||||||| ||||| |||||||||||||    
T  42942104 aacactttgtgtgcaaagtataaaacatattcaaattatgttcatttgccacaattcaaagccatattatgatttaaacagcataggcaacaactacatt 42942203  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  42942204 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 42942283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 8580027 - 8580302
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||    
T  8580027 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 8580125  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||||     
T  8580126 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagctacattatgatttaaacaacataggcaacaactacattcaa 8580225  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  8580226 ttatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 8580302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 28877194 - 28876952
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |   |||| ||||| |||||||    
T  28877194 atacacttaaccaaactataattaacatcatttctatcatttccataacc-aaactaactaaataatcaataaaattgtcattgagacattttatcaaac 28877096  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||| |||| ||||||||||||| |     
T  28877095 acttggtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaatataggcaacaactacatttaa 28876996  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||   ||||||||||||||||| || ||||| ||||||    
T  28876995 ttatcaatttctaaactacacatgcaatcatcaaattctcaatt 28876952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 68 - 291
Target Start/End: Original strand, 14260 - 14486
Alignment:
Q  68 taaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc 164  Q
    |||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14260 taaactaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccacc 14359  T
Q  165 attcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattta 264  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||||||| || ||||| ||||||     |    
T  14360 attcaaagccacattatgatttaaacaacataggcaacaactacatttatttatcaattcctaaactacgcatgcaatcatcaaattttcaattttgaaa 14459  T
Q  265 taaaacctaaccacatgcaaactactc 291  Q
    | || ||||||||||| ||||||||||    
T  14460 tcaaccctaaccacatacaaactactc 14486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 56 - 293
Target Start/End: Complemental strand, 20422463 - 20422213
Alignment:
Q  56 atttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 152  Q
    |||||||||||||||||||||||||||||||| |||||| |   || ||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||    
T  20422463 atttccataacctaaactaactaaataatcaaaataattgtcattggggcattttatcaaacactttgtgtgaaaagtatcaaacatattcaaaatgtgt 20422364  T
Q  153 ccatttgccaccattcaaagccacattct----------catttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaat 242  Q
     |||||| ||||||| ||| | ||||| |          |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  20422363 tcatttggcaccatttaaaactacattatactagaacatcatttaaataacatagacaacaactacattcatttatcaattcatacactacacatccaat 20422264  T
Q  243 gatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
     || ||||||||||||| |  || || ||||||||||||||||||||||||    
T  20422263 catcaaattgtcaattcctacatcaaccctaaccacatgcaaactactcaa 20422213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 56 - 258
Target Start/End: Original strand, 40624473 - 40624688
Alignment:
Q  56 atttccataacctaaactaactaaataatcaatataatttttg---aggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 152  Q
    |||| ||||| ||||||||||||||||||||||| |||| ||    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40624473 attttcataatctaaactaactaaataatcaataaaattgttattaaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 40624572  T
Q  153 ccatttgccaccattcaaagccacatt----------ctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaat 242  Q
     |||||| ||||||||||| |||||||           ||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  40624573 tcatttgtcaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacaactacattcatttatcaattcataaaatacacatgcaat 40624672  T
Q  243 gatgaaattgtcaatt 258  Q
     || ||||||||||||    
T  40624673 catcaaattgtcaatt 40624688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 5197490 - 5197361
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  5197490 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 5197391  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  5197390 tgttcttttgccaccattcaaaaccacatt 5197361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 19040685 - 19040802
Alignment:
Q  65 acctaaactaactaaataatcaatataattt----ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgc 160  Q
    ||||||||||||||||||||||||| |||||    ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19040685 acctaaactaactaaataatcaata-aatttgtcattgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgc 19040783  T
Q  161 caccattcaaagccacatt 179  Q
    ||||||||||| |||||||    
T  19040784 caccattcaaacccacatt 19040802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 179
Target Start/End: Original strand, 27673224 - 27673338
Alignment:
Q  68 taaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc 164  Q
    |||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||||| | |||||||||    
T  27673224 taaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccacc 27673323  T
Q  165 attcaaagccacatt 179  Q
    ||||||| |||||||    
T  27673324 attcaaaaccacatt 27673338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 30705641 - 30705524
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||| ||| ||||||| | ||| ||||| | ||||||    
T  30705641 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactaaaaatgtgttcttttgcc 30705542  T
Q  162 accattcaaagccacatt 179  Q
    |||||| ||| |||||||    
T  30705541 accattgaaaaccacatt 30705524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 17658452 - 17658392
Alignment:
Q  325 agaaactgcaaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaactg 385  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||| |||| |||||||||    
T  17658452 agaaactgcaaaactaagtttatgtttctgcatatgttcagcacgcctcggcagttaactg 17658392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 15073754 - 15074027
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  15073754 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 15073852  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||    
T  15073853 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttat 15073952  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15073953 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 15074027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 14689576 - 14689854
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||    
T  14689576 aatatacacttaaccaaacaataattaacatcatttttatcatttccataacataaactaactaaataatcaatataattttcattgaggcatttgatca 14689675  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||| |||||||||||||| |||||||||||||||  ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  14689676 aacactttgtatgcaaagtataaaagatattcaaattgtgtttatttgccactattcaaagctacattatcatttaaacaacatagacaacaactacatt 14689775  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactact 290  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  14689776 catttatcaataaataaactacacatgcaatgatgaaattgtcaattcatttatcaaacttaaccacatacaaactact 14689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 42507553 - 42507826
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  42507553 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 42507651  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||    
T  42507652 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttat 42507751  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  42507752 caatacataaactacacatgcaatgatgaaattgttaattcatttataaaacctaaccacatgcaaactagtcaa 42507826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 47672603 - 47672881
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  47672603 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 47672702  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  47672703 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 47672802  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactact 290  Q
    ||||||||||| |||| | || ||||||||| || ||||||||||||     || || |||||||||||||||||||||    
T  47672803 catttatcaattcatagattatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactact 47672881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 292
Target Start/End: Complemental strand, 36978153 - 36977873
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  36978153 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 36978054  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||| | ||||||||||||||| |||||||||||||    
T  36978053 aacactttgtgtgcaaagtataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacatt 36977954  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactca 292  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || |||||||||||||||||||||||    
T  36977953 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactca 36977873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 9494314 - 9494592
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  9494314 aatatacacttaatcaaactataattaacatcatttctatcatt-ccataacctaaactaactaaataatcaatataattttcattgacgcatttgatca 9494412  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  9494413 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 9494512  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| |||||| |||||||||||  || ||||| ||||||     || || || |||||||||||||||||||    
T  9494513 catttatcaattcataaattacacatgcaaccatcaaattttcaattttaaaatcaacccaaaccacatgcaaactactc 9494592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 39461083 - 39460804
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  39461083 aatatacacttaaccaaactataattaacatcatttctaccatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 39460984  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||    
T  39460983 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaaaataggcaacaactacatt 39460884  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  39460883 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 39460804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 17835631 - 17835385
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  17835631 aatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 17835532  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  17835531 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 17835432  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||    
T  17835431 catttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 17835385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 37340859 - 37340613
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  37340859 aatatactcttaaccaaactataattaacagcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 37340760  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||    
T  37340759 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaagtacatt 37340660  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||| ||||| ||||||||||||||| ||| || ||||||||||||    
T  37340659 catttttcaattcataaactacacatgaaatcatcaaattgtcaatt 37340613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 10517535 - 10517256
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |   |||| ||||| ||||    
T  10517535 aatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatca 10517436  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  10517435 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 10517336  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  10517335 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 10517256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 47776889 - 47776610
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattt----ttgaggcatttgatc 110  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||| ||||| |||    
T  47776889 aatatacacttaaccagactataattaacatcatttctatcatttccataacctaaactaactaaataatcaata-aatttgtcattgagacattttatc 47776791  T
Q  111 aaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  47776790 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcaccattcaaagccacattatgatttaaacaacataggcaacaactacat 47776691  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  47776690 tcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 47776610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 27453137 - 27453416
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |   |||| ||||| ||||    
T  27453137 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactgactaaataatcaataaaattgtcaatgagacattttatca 27453236  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||  ||||||||||||    
T  27453237 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacatt 27453336  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || ||  |||||||||||||||||||||    
T  27453337 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaactctaaccacatgcaaactactc 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 34738921 - 34738642
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttt---gaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |    ||| ||||| ||||    
T  34738921 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcatcgagacattttatca 34738822  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||  ||||||||||||    
T  34738821 aacactttgtgagcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggtaacaactacatt 34738722  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  34738721 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 34738642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 68 - 293
Target Start/End: Original strand, 17741019 - 17741257
Alignment:
Q  68 taaactaactaaataatcaatataatt----tttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccac 163  Q
    |||||||||||||||||||||||||||    |||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||    
T  17741019 taaactaactaaataatcaatataattctcatttg-ggaattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatatggcac 17741117  T
Q  164 cattcaaagccacattct----------catttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgt 253  Q
    |||||||| ||||||| |          |||||||| | ||   ||||||||||||||||||||||||| |||||||||||||||||||  | ||| |||    
T  17741118 cattcaaaaccacattatacttaaacatcatttaaatatcaattacaacaactacattcatttatcaattcataaactacacatgcaatcttcaaaatgt 17741217  T
Q  254 caattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  17741218 caattcattcataaaccctaaccacatgcaaactactcaa 17741257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 556205 - 556331
Alignment:
Q  56 atttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 152  Q
    |||| |||||| ||||||||||||||||| |||| |||| |   |||||||||| |||||||||||||| |||||||||| ||||||| ||||| | |||    
T  556205 attttcataacataaactaactaaataataaataaaattgtcattgaggcattttatcaaacactttgtatgcaaagtatcaaacatactcaaaatatgt 556304  T
Q  153 ccatttgccaccattcaaagccacatt 179  Q
     |||||||||||||||||| |||||||    
T  556305 tcatttgccaccattcaaaaccacatt 556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 5541096 - 5541222
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| |||||||| |||||||||||||||| ||||||| ||||| |     
T  5541096 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaata 5541195  T
Q  150 tgtccatttgccaccattcaaagccac 176  Q
    ||  | |||||||||||||||| ||||    
T  5541196 tgatcttttgccaccattcaaaaccac 5541222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 41880995 - 41880878
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  41880995 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 41880896  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  41880895 accattcaaaaccacatt 41880878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 48403862 - 48403745
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  48403862 acctaaactaactaaataatcaataaaattatcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 48403763  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  48403762 accattcaaaaccacatt 48403745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 16675303 - 16675186
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| |||||||||||||||||| |||||||||||| |||| |   |||| ||||| || |||||||||||||||||||||| ||||||| ||||| ||    
T  16675303 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16675204  T
Q  150 tgtccatttgccaccatt 167  Q
    | | | ||||||||||||    
T  16675203 tattcttttgccaccatt 16675186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 17649671 - 17649554
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| |||||||||||||||||| |||||||||||| |||| |   |||| ||||| || |||||||||||||||||||||| ||||||| ||||| ||    
T  17649671 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 17649572  T
Q  150 tgtccatttgccaccatt 167  Q
    | | | ||||||||||||    
T  17649571 tattcttttgccaccatt 17649554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 35609984 - 35610101
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  35609984 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 35610083  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  35610084 accaatcaaaaccacatt 35610101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 46740103 - 46740224
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||| ||||||||||| ||||||||||||| |||| |   |||  ||||| ||||| ||||||||||||||||||| ||||||| ||||| ||    
T  46740103 atcatatccatgacctaaactaattaaataatcaataaaattgtcattgacacattttatcaatcactttgtgtgcaaagtatcaaacatactcaaaatg 46740202  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||| | ||||||||||||||||    
T  46740203 tgttcttttgccaccattcaaa 46740224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 45257492 - 45257376
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||| ||    
T  45257492 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgt-tttttacc 45257394  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  45257393 accattcaaaaccacatt 45257376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 179
Target Start/End: Original strand, 17465329 - 17465406
Alignment:
Q  102 catttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   |||||||||||||||| |||||||    
T  17465329 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacatt 17465406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 17587885 - 17587808
Alignment:
Q  102 catttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   |||||||||||||||| |||||||    
T  17587885 cattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacatt 17587808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 9370958 - 9371071
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| |||||||||||||||||||||||||    |||| ||||| |||||   ||||||    
T  9370958 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtat----catactcaaaatgtgttattttgcc 9371053  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  9371054 accaatcaaaaccacatt 9371071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 14689986 - 14690048
Alignment:
Q  320 aaagaagaaactgcaaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaa 382  Q
    ||||||||||||| |||||||| ||| |||||||| ||||| ||||||||  | |||||||||    
T  14689986 aaagaagaaactgtaaaactgagtttctgtttctggatatgttcagcacgtcttggtagttaa 14690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 5303739 - 5303985
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  5303739 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 5303838  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  5303839 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacatt 5303938  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  5303939 catttatcaattcataaactacacatgcaatcatgaaattgtcaatt 5303985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 489155 - 489428
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||    
T  489155 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactt 489253  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||    
T  489254 tgtgtgcaaagtataaaacatatttaaattgtgttcatttgcaaccattcaaagccacattataatttaaactacataggcaacatctacattcatttat 489353  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  489354 caatacataaactacacatgcaatgatgaaattgtcaattcatttgtaaaacctaaccacatgcaaactactcaa 489428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 44 - 293
Target Start/End: Original strand, 42485086 - 42485337
Alignment:
Q  44 atcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 140  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||||||||||||||||||||||||    
T  42485086 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacata 42485184  T
Q  141 ttcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgca 240  Q
    |||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  42485185 ttcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaacatctacattcatttatcaatacataaactacacatgca 42485284  T
Q  241 atgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42485285 atgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 42485337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 34822535 - 34822814
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  34822535 aatatacacttaaccaaactataattaatatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 34822634  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||||   |||||||||||||||| | |||||| |||||||| |||||||||||||    
T  34822635 aacactttgtgtgcagagtataaaacatatttaaattgtgttcatttgcagtcattcaaagccacattatgatttaaccaacataggcaacaactacatt 34822734  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  34822735 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 34822814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 39846504 - 39846783
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttt---gaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    ||| || || ||||    
T  39846504 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcatggagacagtttatca 39846603  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  39846604 aacactttgtgtacaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 39846703  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  39846704 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 39846783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 29 - 291
Target Start/End: Complemental strand, 39602256 - 39601991
Alignment:
Q  29 caaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgc 125  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||    
T  39602256 caaaatataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgc 39602157  T
Q  126 aaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaataca 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |     
T  39602156 aaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcc 39602057  T
Q  226 taaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  39602056 taaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 39601991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 43212060 - 43211814
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  43212060 aatatacacttaaccaaactataattaacatcatttatatcatttccttaacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 43211961  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  43211960 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttcccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 43211861  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||| | ||||||||||||||||| ||  |||||||||||    
T  43211860 catttatcaattcctaaactacacatgcaatcatcgaattgtcaatt 43211814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 43188604 - 43188325
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |   |||  ||||| ||||    
T  43188604 aatatacacttaatcaaactataattaacatcatttatatcatttccataacataaactaactaaataatcaataaaattgtcattgaaacattttatca 43188505  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  43188504 aacactttgtatgcaaagtataaaacatattcaaatcgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacatt 43188405  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||| ||| | ||||||||||||||||| || ||||||||||||     || || | ||||||||||||||||||||    
T  43188404 catttattaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactc 43188325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 39938734 - 39939013
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |   |||| ||||| ||||    
T  39938734 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgagacattttatca 39938833  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||    
T  39938834 aatactttgtgtgcaaagtataaaacttattcaaattgtgttcatttgccaccattcaaagccccattatgatttaaacaacataggcaacaactacatt 39938933  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||| ||||| ||| || ||||| ||||||     || || |||||||||||| |||||||||    
T  39938934 catttatcaattcctaaactatacatgtaatcatcaaattatcaattttaaaatcaaccctaaccacatgtaaactactc 39939013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 15036246 - 15036492
Alignment:
Q  15 aatatacacttaatcaaactataattaaca-tcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatc 110  Q
    ||||||||||||| |||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||    
T  15036246 aatatacacttaaccaaactataattaaccctaatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatc 15036344  T
Q  111 aaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  15036345 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacat 15036444  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    |||||||||||| | | ||||||||||||||| || ||||||||||||    
T  15036445 tcatttatcaattcctgaactacacatgcaatcatcaaattgtcaatt 15036492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 40076777 - 40077047
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||| |||||||||| |         |||||||||||||||||||||||||||||||||   |||||||||||||||    
T  40076777 aatatacacttaaccaaactataattatcatcatttctgt---------aacctaaactaactaaataatcaatataattttcattgaggcatttgatca 40076867  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||    
T  40076868 aacactttgtgtgcaaattataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacagctacatt 40076967  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||  ||| || ||||||||||||     || || ||||||||||||||||||||||    
T  40076968 catttatcaattcataaactacacatataatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 40077047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 291
Target Start/End: Complemental strand, 39252528 - 39252288
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||||||||||||||||||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39252528 atcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 39252429  T
Q  150 tgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaa 249  Q
    | | |||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||| ||| | ||||||||||||||||| || |||    
T  39252428 tattcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacattcatttattaattcctaaactacacatgcaatcatcaaa 39252329  T
Q  250 ttgtcaattcatttataa--aacctaaccacatgcaaactactc 291  Q
    ||||||||   |||| ||  ||||||||||||| ||||||||||    
T  39252328 ttgtcaat---tttaaaatcaacctaaccacatacaaactactc 39252288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 41249607 - 41249870
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaac 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |     ||||    |||      
T  41249607 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgt-----cattgcggcaa-- 41249699  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
          ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  41249700 ------tgtgcaaagtataaagcatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcat 41249793  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||| | ||||||||||||||||| || ||||||||||||     ||  | ||||||||||||||||||||||    
T  41249794 ttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatctaccctaaccacatgcaaactactc 41249870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 53 - 293
Target Start/End: Complemental strand, 24249999 - 24249757
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||||||||||||||||| |||||||||||||||||||| |   || ||||||| |||||| ||||| |||||||||||| ||||||||||||| ||    
T  24249999 atcatttccataacctaaactgactaaataatcaatataattctcattggggcattttatcaaatactttatgtgcaaagtatcaaacatattcaaaatg 24249900  T
Q  150 tgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaa 249  Q
    ||  |||||| ||||||||||| ||||||| | | ||||||| ||   ||||||||||||||||||||||||| ||||||||||||||||||| || |||    
T  24249899 tgctcatttgacaccattcaaaaccacattat-acttaaacatcaattacaacaactacattcatttatcaattcataaactacacatgcaatcatcaaa 24249801  T
Q  250 ttgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||| | ||| || ||||||||||||||||||||||||    
T  24249800 ttgtcaattcctatatcaaccctaaccacatgcaaactactcaa 24249757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 45064782 - 45064517
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||    
T  45064782 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 45064684  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    ||||||||||||||           ||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||     
T  45064683 actttgtgtgcaaaa----------attcaaattgtgttcatttgccaccattcaaagccacattaagatttaaacaacataggcaacaactacattcaa 45064594  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  45064593 ttatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 45064517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 2984677 - 2984510
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatt---tttgaggcatttgatca 111  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    ||||||||||| ||||    
T  2984677 aatatacactttatcaaactataattaacatcattttcatcatttccataacctaaactaactaaataatcaatataattgtcgttgaggcattttatca 2984578  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    ||||||||||||||||||||| |||| ||||||||||||||  ||||| || |||||||| |||||||    
T  2984577 aacactttgtgtgcaaagtatgaaacttattcaaattgtgtttatttggcatcattcaaaaccacatt 2984510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 37327292 - 37327163
Alignment:
Q  61 cataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatt 157  Q
    ||||||||||||||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37327292 cataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 37327193  T
Q  158 tgccaccattcaaagccacattctcattta 187  Q
    ||||||||||||||  |||||| |||||||    
T  37327192 tgccaccattcaaaatcacattatcattta 37327163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 35552182 - 35552053
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  35552182 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 35552083  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  35552082 tgttcttttgccaccattcaaaaccacatt 35552053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 25864609 - 25864736
Alignment:
Q  163 ccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatt 262  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||        
T  25864609 ccattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcat-aactacacatgcaatcatcaaattgtcaattttaa 25864707  T
Q  263 tataaaacctaaccacatgcaaactactc 291  Q
     || || ||||||||||||||||||||||    
T  25864708 aatcaaccctaaccacatgcaaactactc 25864736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 20857802 - 20857673
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| |||||||| |||||||||||||||| ||||||| ||||| ||    
T  20857802 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaatg 20857703  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | ||||| |||||||||| |||||||    
T  20857702 tgttcttttgcaaccattcaaaaccacatt 20857673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 179
Target Start/End: Complemental strand, 45128261 - 45128137
Alignment:
Q  58 ttccataacctaaactaactaaataatcaatataattt---ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtcc 154  Q
    |||||||||||||||||||| ||||||||||| ||||    ||| ||||||| ||||||||||||||||||||||||| ||||||| |||||  |||| |    
T  45128261 ttccataacctaaactaactcaataatcaatacaattcacattggggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaacgtgttc 45128162  T
Q  155 atttgccaccattcaaagccacatt 179  Q
     |||||||||||||||| |||||||    
T  45128161 ttttgccaccattcaaaaccacatt 45128137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 25095 - 25212
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  25095 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 25194  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  25195 accaatcaaaaccacatt 25212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 1053029 - 1052912
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  1053029 acctaaactaactaaataatcaataaaattgtcattgatacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 1052930  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  1052929 accaatcaaaaccacatt 1052912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 5677587 - 5677458
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||||||||||||||||| |||  |||||||||||||||||   || ||||||| |||||||||||| ||||||||  || ||||||| ||||| ||    
T  5677587 atcatttccataacctaaacttactcgataatcaatataattttcattggggcattttatcaaacactttctgtgcaaaacatcaaacatactcaaaatg 5677488  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    | | | ||||| |||||||||| |||||||    
T  5677487 tattcttttgctaccattcaaaaccacatt 5677458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 23021889 - 23022006
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  23021889 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 23021988  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  23021989 accaatcaaaaccacatt 23022006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 26659951 - 26659834
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  26659951 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 26659852  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  26659851 accaatcaaaaccacatt 26659834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 34371450 - 34371552
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||| | |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  34371450 atcatatccataacctaaactaactaaataatcaaaaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 34371549  T
Q  150 tgt 152  Q
    |||    
T  34371550 tgt 34371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 37327164 - 37327112
Alignment:
Q  206 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||||||||| ||||||||||||||||||| || ||||||||||||    
T  37327164 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatt 37327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 22495363 - 22495213
Alignment:
Q  121 tgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattct----------catttaaacaacatagacaacaactacat 210  Q
    |||||||||||| ||||||||||  |||||||  ||||| ||||||||||| |||||||||          ||| |||||| ||   ||| |||||||||    
T  22495363 tgtgcaaagtatcaaacatattctcattgtgttaatttgacaccattcaaaaccacattctacttaaacatcatctaaacatcaattacatcaactacat 22495264  T
Q  211 tcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcat 261  Q
    |||||||||||| | ||||||||||||||||  || ||| |||||||||||    
T  22495263 tcatttatcaattcgtaaactacacatgcaaccatcaaaatgtcaattcat 22495213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 88
Target Start/End: Original strand, 34370133 - 34370168
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaat 88  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34370133 atcatatccataacctaaactaactaaataatcaat 34370168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 370 - 403
Target Start/End: Original strand, 42605258 - 42605291
Alignment:
Q  370 catcggtagttaactgcagccgatttttgaattc 403  Q
    |||||| |||||||||||||||||||||||||||    
T  42605258 catcggcagttaactgcagccgatttttgaattc 42605291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 89
Target Start/End: Complemental strand, 2984709 - 2984681
Alignment:
Q  61 cataacctaaactaactaaataatcaata 89  Q
    |||||||||||||||||||||||||||||    
T  2984709 cataacctaaactaactaaataatcaata 2984681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 24250028 - 24249992
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttc 51  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  24250028 aatatacactttatcaaactaaaattaacatcatttc 24249992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 39252557 - 39252521
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttc 51  Q
    ||||||||||| | |||||||||||||||||||||||    
T  39252557 aatatacacttgaccaaactataattaacatcatttc 39252521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 51683757 - 51683478
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  51683757 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 51683658  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  51683657 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacatt 51683558  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  51683557 catttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 51683478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 1089110 - 1089383
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  1089110 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 1089208  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||  ||||| ||||||||||||||    
T  1089209 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattattatttaaactacatatgcaacatctacattcatttat 1089308  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1089309 caatacataaactacacttgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 1089383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 1308640 - 1308913
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||| |||||||    
T  1308640 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcgaacactt 1308738  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||  ||||| ||||||||||||||    
T  1308739 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacatatgcaacatctacattcatttat 1308838  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1308839 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 1308913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 22 - 293
Target Start/End: Original strand, 30726267 - 30726540
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  30726267 acttaaccaaagtataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 30726365  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||    
T  30726366 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcatttat 30726465  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30726466 caatacataaactacacgtgcaatgatgaaattgtcaattcatttataaaacctaaccaaatgcaaactactcaa 30726540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 48256089 - 48256368
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||    
T  48256089 aatatacacttaaccaaactataattaacatcatttctatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatca 48256188  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||    
T  48256189 aacactttgtgtgcaaagtataaaacatattcaaattgttttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacatt 48256288  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  48256289 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactc 48256368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 55407305 - 55407584
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||    
T  55407305 aatatacacttaacgaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcaatgaggcattcgatca 55407404  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||    
T  55407405 aacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacatt 55407504  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  55407505 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 55407584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 50275289 - 50275010
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |   |||||||||| ||||    
T  50275289 aatatacatttaaccaaactataattaacatcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgaggcattttatca 50275190  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  50275189 aacactttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaagccacattctgatttaaacaacataggcaacaactacatt 50275090  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  50275089 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactc 50275010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 293
Target Start/End: Original strand, 21022407 - 21022687
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||||    
T  21022407 aatatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatca 21022505  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  21022506 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 21022605  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||||    
T  21022606 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactcaa 21022687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 37021601 - 37021847
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |   ||| |||||| ||||    
T  37021601 aatatacacttaaccaaactataattaacatcatttctatcattttcataacctaaactaactaaataatcaataaaattgtcattgaagcattttatca 37021700  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||  |||||||||||||    
T  37021701 aacactttgtgtgcaaagtataaaagatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaacaactacatt 37021800  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||    
T  37021801 catttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 37021847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 27 - 293
Target Start/End: Complemental strand, 14315927 - 14315648
Alignment:
Q  27 atcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgt 123  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||   |  |||||||  |||||||||||| ||    
T  14315927 atcaaactataattaacatcatttcaatcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgt 14315828  T
Q  124 gcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattct----------catttaaacaacatagacaacaactacattca 213  Q
    ||||||||||||||||| ||||| ||||| |||||| ||||||||||| ||||||| |          |||||||||||||||| |||||||||||||||    
T  14315827 gcaaagtataaaacatactcaaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattca 14315728  T
Q  214 tttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14315727 tttatcaattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactcaa 14315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 61 - 291
Target Start/End: Complemental strand, 68100 - 67867
Alignment:
Q  61 cataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatt 157  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  68100 cataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttatgtgcaaagtataaaacatattcaaattgtgttcatt 68001  T
Q  158 tgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaat 257  Q
    ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| || |||||||||||    
T  68000 tgctaccattcaaagccacattatcatttaaacaacataggcaacaactacatttatttatcaattcataaactacacatgcaatcattaaattgtcaat 67901  T
Q  258 tcatttataaaacctaaccacatgcaaactactc 291  Q
    |     || || ||||||||||||||||||||||    
T  67900 tttaaaatcaaccctaaccacatgcaaactactc 67867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 50902034 - 50901756
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||| |   |||  ||||| ||||    
T  50902034 aatatacacttaaccaaactataattaacatcatttctatcatttccataacttaaactaactaaa-aatcaataaaattgtcattgaaacattttatca 50901936  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||| | | |||||||||||||||||||||||||||    
T  50901935 aacactttgtgtgcaaaatataaaacatattcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaacaactacatt 50901836  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || |||||||||||| |||||||||    
T  50901835 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgtaaactactc 50901756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 40357802 - 40358077
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||    
T  40357802 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 40357900  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||     
T  40357901 acttggtgtgcaaagtataaaacatattcaaactgtgttcatttgccaccattcaaatccacattatgatttaaacaacataggcaacaactacattcaa 40358000  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||   ||||||||||||||||| || ||||| ||||||     || || ||||||||||| ||||||||||    
T  40358001 ttatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactc 40358077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 47 - 293
Target Start/End: Complemental strand, 14297658 - 14297399
Alignment:
Q  47 atttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattc 143  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| ||||||   |  |||||||  |||||||||||| ||||||||||||||||||| ||    
T  14297658 atttcaatcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacatactc 14297559  T
Q  144 aaattgtgtccatttgccaccattcaaagccacattct----------catttaaacaacatagacaacaactacattcatttatcaatacataaactac 233  Q
    ||| ||||| |||||| ||||||||||| ||||||| |          |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  14297558 aaaatgtgttcatttggcaccattcaaaaccacatttttattatacatcatttaaacaacataggcaacaactacattcatttatcaattcataaactac 14297459  T
Q  234 acatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14297458 acatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactcaa 14297399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 21537979 - 21538258
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||| |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| |   |||||||||| ||||    
T  21537979 aatatacactttatcaaactataattaacatcatttc---------cataacctaaactaactaaataatcaatataattatcattgaggcattttatca 21538069  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt----------ctcatttaaacaacatagacaa 201  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||||| || |||||||| |||||||           ||||||||||||||||| |||    
T  21538070 aacactttgtgtgcaaagtatcaaacagattcaaattgtgttcatttggcatcattcaaaaccacattatcattaaacatcatttaaacaacataggcaa 21538169  T
Q  202 caactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactact 290  Q
    ||||||||||||||||||||| |||||||||| ||||||||| | |||||||||||||||| ||||| |||||||||||||||||||||    
T  21538170 caactacattcatttatcaattcataaactacccatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactact 21538258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 53 - 292
Target Start/End: Original strand, 10752983 - 10753235
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    |||||||| |||||||||||||| |||||||||||||||||| |   |||||||||| ||||||||||||||||||||||||||||||||||| |||  |    
T  10752983 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10753082  T
Q  150 tgtccatttgccaccattcaaagccacatt----------ctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgc 239  Q
    |||||||||||||||||||||| |||||||           ||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  10753083 tgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatcaattcataaactacacatgc 10753182  T
Q  240 aatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactca 292  Q
    |||| | |||||||||||||||| ||||| |||||||||||||||||||||||    
T  10753183 aatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactca 10753235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 53 - 292
Target Start/End: Original strand, 10966752 - 10967004
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    |||||||| |||||||||||||| |||||||||||||||||| |   |||||||||| ||||||||||||||||||||||||||||||||||| |||  |    
T  10966752 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10966851  T
Q  150 tgtccatttgccaccattcaaagccacatt----------ctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgc 239  Q
    |||||||||||||||||||||| |||||||           ||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  10966852 tgtccatttgccaccattcaaaaccacattatcattaaacatcatttaaacagcataggcaacatctacattcatttatcaattcataaactacacatgc 10966951  T
Q  240 aatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactca 292  Q
    |||| | |||||||||||||||| ||||| |||||||||||||||||||||||    
T  10966952 aatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactca 10967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 258
Target Start/End: Complemental strand, 46436753 - 46436553
Alignment:
Q  61 cataacctaaactaactaaataatcaatataattt---ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatt 157  Q
    ||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46436753 cataacctaaactaactaaataatcaataaaattgccattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatt 46436654  T
Q  158 tgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaat 257  Q
    |||||||||||| | ||||| | ||||||||||| ||||  |||||||||||||| ||||| ||| ||||||||||||||||||| || |||||||||||    
T  46436653 tgccaccattcagaaccacaatatcatttaaacagcataagcaacaactacattcgtttattaattcataaactacacatgcaatcatcaaattgtcaat 46436554  T
Q  258 t 258  Q
    |    
T  46436553 t 46436553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 53 - 293
Target Start/End: Original strand, 11083562 - 11083815
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||| ||||||||||||||||| |||||||| || ||||||   |  |||||||  ||||||||||||||||||||| || ||||||| ||||| ||    
T  11083562 atcattttcataacctaaactaactcaataatcagtacaattttcatttgggcattttgtcaaacactttgtgtgcaaagcatcaaacatactcaaaatg 11083661  T
Q  150 tgtccatttgccaccattcaaagccacattct----------catttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgc 239  Q
    ||| |||||| ||||||||||| ||||||| |          |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  11083662 tgttcatttgacaccattcaaaaccacatttttattatacatcatttaaacagcataggcaacaactacattcatttatcaatacataaactacacatgc 11083761  T
Q  240 aatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11083762 aatgatcaaattgtcaattcattcataaaccctaaccacatgcaaactactcaa 11083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 11050041 - 11050208
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattt---ttgaggcatttgatca 111  Q
    ||||||||||| |||||||||| ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||   |||| |||||| ||||    
T  11050041 aatatacactttatcaaactatcattaacatcctctccatcatttccataacctaaactaactaaataatcaatataattttcattgatgcattttatca 11050140  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacatt 179  Q
    || |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||    
T  11050141 aatactttgtgtgcaaagtatcaaacatattcaaattgtgttcatttggcaccattcaaaaccacatt 11050208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 50023099 - 50023228
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  50023099 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50023198  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  50023199 tgttcttttgccaccattcaaaaccacatt 50023228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 41933179 - 41933308
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||   || ||| ||| ||||||||||||||||||||||||| ||||||||||||||      
T  41933179 atcatttccataatctaaactaactcaataatcaatataattttcattggggctttttatcaaacactttgtgtgcaaagtatcaaacatattcaaataa 41933278  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    | | |||||| ||||||||||| |||||||    
T  41933279 tcttcatttgacaccattcaaaaccacatt 41933308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 50030217 - 50030346
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| |||||||||||||||||||||||||||| || |||| |   ||| |||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  50030217 atcatatccataacctaaactaactaaataatcagtaaaattgtcattgatgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50030316  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  50030317 tgttcttttgccaccattcaaaaccacatt 50030346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 41798563 - 41798680
Alignment:
Q  65 acctaaactaactaaataatcaatataattt----ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgc 160  Q
    |||| |||||||||||||||||||| |||||    ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41798563 accttaactaactaaataatcaata-aatttgtcgttgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgc 41798661  T
Q  161 caccattcaaagccacatt 179  Q
     |||||||||| |||||||    
T  41798662 taccattcaaacccacatt 41798680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 9892836 - 9892953
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||||    
T  9892836 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 9892935  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  9892936 accattcaaaaccacatt 9892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 289
Target Start/End: Original strand, 4719949 - 4720163
Alignment:
Q  68 taaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc 164  Q
    |||||||| ||||||||||||  ||||||   |  |||||||  |||||||||||||||||||||||| ||||||||||  |||||||  ||||| ||||    
T  4719949 taaactaagtaaataatcaatgcaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 4720048  T
Q  165 attcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattta 264  Q
    |||||||  ||||||||          || || ||| ||| |||||||||||| |||| ||||||||||||| ||||| || ||| ||||||||| |       
T  4720049 attcaaaatcacattct----------acttaaacatcaattacattcatttaccaattcataaactacacacgcaatcatcaaaatgtcaattcttacg 4720138  T
Q  265 taaaacctaaccacatgcaaactac 289  Q
    |||| ||||||||||||||||||||    
T  4720139 taaaccctaaccacatgcaaactac 4720163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 3184473 - 3184344
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||| |||||||||||||||  |||| |||| |   ||||||||||  |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3184473 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3184374  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  3184373 tgatcttttgccaccattcaaaaccacatt 3184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 3185440 - 3185569
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||| |||||||||||||||  |||| |||| |   ||||||||||  |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3185440 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3185539  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  3185540 tgatcttttgccaccattcaaaaccacatt 3185569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 3185648 - 3185777
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||| |||||||||||||||  |||| |||| |   ||||||||||  |||||||||||| ||||||||||| ||||||| ||||| ||    
T  3185648 atcatatccataacccaaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatg 3185747  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  3185748 tgatcttttgccaccattcaaaaccacatt 3185777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 6181358 - 6181475
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  6181358 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 6181457  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  6181458 accaatcaaaaccacatt 6181475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 30704532 - 30704419
Alignment:
Q  61 cataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatt 157  Q
    ||||||||||||||||||||||||||||| |||| |   ||||  |||| ||||||||||||||||||||||||| ||||||| | ||| ||||| | ||    
T  30704532 cataacctaaactaactaaataatcaataaaattgtcattgagatattttatcaaacactttgtgtgcaaagtatcaaacatactaaaaatgtgttcttt 30704433  T
Q  158 tgccaccattcaaa 171  Q
    | ||||||||||||    
T  30704432 tcccaccattcaaa 30704419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 49090925 - 49090808
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  49090925 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 49090826  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  49090825 accaatcaaaaccacatt 49090808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 49165538 - 49165421
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||| ||| ||||||| ||||| |||||   ||||||    
T  49165538 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaactatcaaacatactcaaaatgtgttattttgcc 49165439  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  49165438 accattcaaaaccacatt 49165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 171
Target Start/End: Original strand, 44679631 - 44679752
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| || |||||||||||||||||||||||||||  |||  |   |||  ||||| ||||||||||||||||||||| ||| ||||||| ||||| ||    
T  44679631 atcatatctataacctaaactaactaaataatcaatgaaatggtcattgaaacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatg 44679730  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||| | ||||||||||||||||    
T  44679731 tgttcttttgccaccattcaaa 44679752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 31422203 - 31422085
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgat-caaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgc 160  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| || ||||||||||||||||||||||| ||||||| ||||| |||||   |||||    
T  31422203 acctaaactaactaaataatcaataaaattgtcattgacacattttattcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgc 31422104  T
Q  161 caccattcaaagccacatt 179  Q
    ||||| ||||| |||||||    
T  31422103 caccaatcaaaaccacatt 31422085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 50193985 - 50193894
Alignment:
Q  64 aacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgt 152  Q
    |||||||||||| ||||||||||||| |||| |   |||| ||||| |||||||||||| |||||||||||| ||||||| ||||| |||||    
T  50193985 aacctaaactaagtaaataatcaataaaattgtcattgagacattttatcaaacactttatgtgcaaagtatcaaacatactcaaaatgtgt 50193894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 11051371 - 11051421
Alignment:
Q  334 aaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaact 384  Q
    |||||||| ||| |||||||| ||||| |||||||||||||| ||||||||    
T  11051371 aaaactgagtttttgtttctgcatatgttcagcacgcatcggcagttaact 11051421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 21537947 - 21537975
Alignment:
Q  61 cataacctaaactaactaaataatcaata 89  Q
    |||||||||||||||||||||||||||||    
T  21537947 cataacctaaactaactaaataatcaata 21537975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 403
Target Start/End: Original strand, 51644498 - 51644530
Alignment:
Q  371 atcggtagttaactgcagccgatttttgaattc 403  Q
    ||||| |||||||||||||||||||||||||||    
T  51644498 atcggcagttaactgcagccgatttttgaattc 51644530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 6320081 - 6320360
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  6320081 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 6320180  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||    
T  6320181 aacgctttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacatt 6320280  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  6320281 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 6320360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 24088300 - 24088579
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| ||||||||||    
T  24088300 aatatacacctaatcaaactatcattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgagacatttgatca 24088399  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24088400 aacactttgtgtacaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacatt 24088499  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || ||  |||||||||||||||||||||    
T  24088500 catttatcaattcataaactacacatgcaattatcaaattgtcaattttaaaatcaacactaaccacatgcaaactactc 24088579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 31769260 - 31769031
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattt----ttgaggcatttgatc 110  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    ||||| ||||| |||    
T  31769260 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaata-aatttgtcattgagacattttatc 31769162  T
Q  111 aaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacat 210  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| | ||||||||||||||  ||||||||||||    
T  31769161 aaacactttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccaccattcaaaaccacattatgatttaaacaacataagcaacaactacat 31769062  T
Q  211 tcatttatcaatacataaactacacatgcaa 241  Q
    |||||| ||||| | ||||| ||||||||||    
T  31769061 tcatttgtcaattcctaaaccacacatgcaa 31769031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 27 - 293
Target Start/End: Complemental strand, 3381315 - 3381047
Alignment:
Q  27 atcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaacactttgtgtgca 126  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||         ||||||||||| ||||| |||||||||||||    
T  3381315 atcaaactataattaacatcattttaatcatttccataacataaactaattaaataatca---------ttgaggcattttatcaaccactttgtgtgca 3381225  T
Q  127 aagtataaaacatattcaaattgtgtccatttgccaccattca-------------aagccacattctcatttaaacaacatagacaacaactacattca 213  Q
    |  ||||||||||||||||||||||| |||||| |||||||||             || | ||||||  ||| ||||| ||||| ||||||||| |||||    
T  3381224 atatataaaacatattcaaattgtgttcatttgacaccattcatttatcaatacataaactacattc--attgaaacagcataggcaacaactatattca 3381127  T
Q  214 tttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    || |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  3381126 ttcatcaatgcataaactacacatgcaatgatgaaattgtcaattcacttataaaacctaaccacatgcaaattactcaa 3381047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 21601106 - 21600992
Alignment:
Q  68 taaactaactaaataatcaatataatt----tttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccac 163  Q
    |||||||||||||||||||||||||||    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||    
T  21601106 taaactaactaaataatcaatataattctcatttg-ggcattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatttgtcac 21601008  T
Q  164 cattcaaagccacatt 179  Q
    |||||||| |||||||    
T  21601007 cattcaaaaccacatt 21600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 3501686 - 3501557
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| |   ||||||||||  |||||||||||||||||||||||| ||||||| ||||| ||    
T  3501686 atcatatccataacctaaactaactaaataaacaataaaattgtccttgaggcattttctcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 3501587  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||  | |||||||||||||||| |||||||    
T  3501586 tgatcttttgccaccattcaaaaccacatt 3501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 24722445 - 24722324
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   ||| |||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  24722445 atcatatccataacctaaactaactaaataatcaataaaattgtcattgacgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 24722346  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||| | |||| |||||||||||    
T  24722345 tgttcttttgacaccattcaaa 24722324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 26423514 - 26423393
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| |||||||| |||||||||||||||| ||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  26423514 atcatatccataacataaactaactaaataaacaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 26423415  T
Q  150 tgtccatttgccaccattcaaa 171  Q
    ||  | ||||||||||||||||    
T  26423414 tgatcttttgccaccattcaaa 26423393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 6201653 - 6201536
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  6201653 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 6201554  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  6201553 accaatcaaaaccacatt 6201536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 11688620 - 11688503
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  11688620 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 11688521  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  11688520 accaatcaaaaccacatt 11688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 22301685 - 22301568
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  22301685 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 22301586  T
Q  162 accattcaaagccacatt 179  Q
    || ||||||| |||||||    
T  22301585 acaattcaaaaccacatt 22301568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 30829220 - 30829337
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  30829220 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 30829319  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  30829320 accaatcaaaaccacatt 30829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 27617220 - 27617111
Alignment:
Q  65 acctaaactaactaaataatcaatataattt----ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgc 160  Q
    ||||||||||||||||||||||||| |||||    ||||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||| | | |||||    
T  27617220 acctaaactaactaaataatcaata-aatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtattcttttgc 27617122  T
Q  161 caccattcaaa 171  Q
    |||||||||||    
T  27617121 caccattcaaa 27617111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 30424143 - 30424228
Alignment:
Q  203 aactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaacta 288  Q
    |||||||||||||||||||| | ||||||| ||||||||| || ||| |||||||||||  |||||  ||||||||||||| ||||    
T  30424143 aactacattcatttatcaattcctaaactatacatgcaatcatcaaaatgtcaattcatacataaactctaaccacatgcacacta 30424228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 3380918 - 3380855
Alignment:
Q  320 aaagaagaaactgcaaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaac 383  Q
    |||||||||||||||||||||| ||| | |||||| ||||| |||||| || |||| |||||||    
T  3380918 aaagaagaaactgcaaaactgagtttctatttctgcatatgttcagcatgcctcggcagttaac 3380855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 24722039 - 24721987
Alignment:
Q  334 aaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaactgc 386  Q
    |||||||| ||| ||||||||  |||| |||||||||||||| ||||||||||    
T  24722039 aaaactgagtttttgtttctgtttatgttcagcacgcatcggcagttaactgc 24721987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 196; Significance: 1e-106; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 42756706 - 42756429
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattt--ttgaggcatttgatcaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||||||    
T  42756706 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaata-attttcattgaggcatttgatcaa 42756608  T
Q  113 acactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattc 212  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||| |    
T  42756607 acactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagcgacattatgatttaaacaacatagacaacaactacatcc 42756508  T
Q  213 atttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  42756507 atttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 42756429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 42805780 - 42806010
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  42805780 aatatacacctaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 42805879  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42805880 aacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaacaactacatt 42805979  T
Q  212 catttatcaatacataaactacacatgcaat 242  Q
    ||||||||||| ||||||||| |||||||||    
T  42805980 catttatcaattcataaactatacatgcaat 42806010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 49195965 - 49196244
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||| |||||||||||    
T  49195965 aatatacaattaaccaaactataattaacatcatttctatcattttcataacctaaactaactaaataatcaatataattttcattgaagcatttgatca 49196064  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||    
T  49196065 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacatt 49196164  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || | ||||||||||||||||||||    
T  49196165 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactc 49196244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 291
Target Start/End: Original strand, 20917540 - 20917814
Alignment:
Q  20 acacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacac 116  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  20917540 acacttaaccaaactataattaacatcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacac 20917639  T
Q  117 tttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcattt 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||    
T  20917640 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcattt 20917739  T
Q  217 atcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||| ||||||||| ||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  20917740 atcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 20917814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 291
Target Start/End: Original strand, 20926502 - 20926776
Alignment:
Q  20 acacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacac 116  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  20926502 acacttaaccaaactataattaacatcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacac 20926601  T
Q  117 tttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcattt 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||||| ||||||||||||||||||    
T  20926602 tttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaacaactacattcattt 20926701  T
Q  217 atcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||| ||||||||| ||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  20926702 atcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 20926776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 30255520 - 30255799
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||   |||||||||||||||    
T  30255520 aatatacacttaatcaaactataattaacatcatttctatcatttccttaacctgaactaactaaataatcaatataaatttcattgaggcatttgatca 30255619  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  30255620 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 30255719  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||| |||| || |||||| ||||||||| || |||||||||| |     || || ||||||||||||||||||||||    
T  30255720 catttagcaattcacaaactaaacatgcaatcatcaaattgtcaactttaaaatcaaccctaaccacatgcaaactactc 30255799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 42165717 - 42165438
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  42165717 aatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 42165618  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  42165617 aacactttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 42165518  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  42165517 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 42165438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 4007841 - 4008120
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |   |||| ||||| ||||    
T  4007841 aatatacacttaatcaaactataattaacatcctttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatca 4007940  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  4007941 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 4008040  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| ||  |||||||||||     || || ||||||||||| ||||||||||    
T  4008041 catttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactc 4008120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 44230268 - 44229989
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |   |||||||||| ||||    
T  44230268 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaaccaactaaataatcaataaaattgtcattgaggcattttatca 44230169  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |  |||||||||||||| |||||||||||||    
T  44230168 aacacattgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccgttcaaagccacattatgttttaaacaacataggcaacaactacatt 44230069  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  44230068 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 44229989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 47073725 - 47074004
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  47073725 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 47073824  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||    
T  47073825 aacactttgtgtgcaaagtataaaatatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaatataggcaacaactacatt 47073924  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||| | || ||||||||||||     || || ||||||||||| ||||||||||    
T  47073925 catttatcaattcctaaactacacatgcattcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 47074004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 50963508 - 50963230
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  ||| |||| |   |||||||||| ||||    
T  50963508 aatatacacttaaccaaactata-ttaacatcatttatatcatttccataacctaaactaactaaataatttataaaattgtcactgaggcattttatca 50963410  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  50963409 aacactttgtgtgtaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 50963310  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  50963309 catttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 50963230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 50216398 - 50216675
Alignment:
Q  17 tatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaa 113  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| |   ||| |||||| ||||||    
T  50216398 tatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaaccacataatcaataaaattgtcattgaagcattttatcaaa 50216497  T
Q  114 cactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattca 213  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||    
T  50216498 cactttgtgtgcaaagcataaaacatattcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaacaactacattca 50216597  T
Q  214 tttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||| | |||| |||||||||||| || ||||| ||||||     || || ||||||||||||||||||||||    
T  50216598 tttatcaattcctaaattacacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaactactc 50216675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 3976261 - 3975982
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |   |||| ||||| ||||    
T  3976261 aatatacacttaaccaaactataattaacatcctttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatca 3976162  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||    
T  3976161 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacatt 3976062  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    || ||  ||||   ||||||||||||||||| || ||||||||||||  |  || || ||||||||||| ||||||||||    
T  3976061 caattgccaatttctaaactacacatgcaatcatcaaattgtcaatttttaaatcaaccctaaccacatacaaactactc 3975982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 48889289 - 48889019
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||   |||||| ||||||||    
T  48889289 aatatacacttaaccaaactataattaacatcatttc---------cataacctaaactaactaaataatcaatataattttcattgaggcctttgatca 48889199  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||| | ||||||||||||||| |||||||||||||    
T  48889198 aacactttgtgtgcaaagtataaaacatattcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaacaactacatt 48889099  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| ||||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  48889098 catttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 48889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 48563482 - 48563301
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  48563482 aatatacacttaaccaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatca 48563383  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaac 193  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | |||||||||||    
T  48563382 aacattttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagacacattatgatttaaacaac 48563301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 62 - 291
Target Start/End: Complemental strand, 597266 - 597034
Alignment:
Q  62 ataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccattt 158  Q
    ||||||||| |||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | |||    
T  597266 ataacctaagctaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacataatcaaaatgtgttctttt 597167  T
Q  159 gccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    ||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||| || |||||||||||     
T  597166 gccaccattcaaagccacattatgatttaaacaacatgggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaata 597067  T
Q  259 catttataaaacctaaccacatgcaaactactc 291  Q
      |  || || ||||||||||||||||||||||    
T  597066 tttaaatcaaccctaaccacatgcaaactactc 597034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 96 - 291
Target Start/End: Original strand, 3501494 - 3501689
Alignment:
Q  96 ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacat 195  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||    
T  3501494 ttgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacat 3501593  T
Q  196 agacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    || ||||||||||||||| ||||||||   ||||||||||||||||| || ||||| ||||||     || || ||||||||||| ||||||||||    
T  3501594 aggcaacaactacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactc 3501689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 123 - 291
Target Start/End: Complemental strand, 51807413 - 51807245
Alignment:
Q  123 tgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaat 222  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  51807413 tgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaactacattcatttatcaat 51807314  T
Q  223 acataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
       ||||||||||||||||| || ||||||||||||     || || | ||||||||||||||||||||    
T  51807313 ttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaatcataaccacatgcaaactactc 51807245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 31045200 - 31045388
Alignment:
Q  100 ggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagac 199  Q
    |||||||  |||||||||||||||||||||||| ||||||||||| |||||||   |||| ||||||||||| ||||||| | | ||||||| ||   ||    
T  31045200 ggcattttgtcaaacactttgtgtgcaaagtatcaaacatattcacattgtgttattttgacaccattcaaaaccacatttt-acttaaacatcaattac 31045298  T
Q  200 aacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactac 289  Q
    |  |||||||||| |||||||||  |||||||||||||||||| || ||| |||||||||||| ||||| ||||||||||||||||||||    
T  31045299 attaactacattcgtttatcaatttataaactacacatgcaatcatcaaaatgtcaattcattcataaaccctaaccacatgcaaactac 31045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 16611594 - 16611465
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  16611594 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16611495  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  16611494 tgttcttttgccaccattcaaaaccacatt 16611465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 22047659 - 22047788
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  22047659 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 22047758  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  22047759 tgttcttttgccaccattcaaaaccacatt 22047788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 17567619 - 17567749
Alignment:
Q  52 tatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaatt 148  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| |    
T  17567619 tatcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaat 17567718  T
Q  149 gtgtccatttgccaccattcaaagccacatt 179  Q
    |||| | |||||||||||| ||| |||||||    
T  17567719 gtgttcttttgccaccattgaaaaccacatt 17567749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 41612884 - 41612755
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||| |||||||||||| |||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  41612884 atcatatccataaactaaactaactagataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 41612785  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  41612784 tgttcttttgccaccattcaaaaccacatt 41612755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 52390964 - 52391081
Alignment:
Q  65 acctaaactaactaaataatcaatataattt----ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgc 160  Q
    ||||||||||||||||||||||||| |||||    ||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||   |||||    
T  52390964 acctaaactaactaaataatcaata-aatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttattttgc 52391062  T
Q  161 caccattcaaagccacatt 179  Q
    ||||||||||| |||||||    
T  52391063 caccattcaaaaccacatt 52391081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 20351161 - 20351040
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttga-tcaaacactttgtgtgcaaagtataaaacatattcaaatt 148  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||| ||||| | |||||||||||||||||||||||| ||||||| ||||| |    
T  20351161 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttaatcaaacactttgtgtgcaaagtatcaaacatactcaaa-t 20351063  T
Q  149 gtgtccatttgccaccattcaaa 171  Q
    |||| | ||||||||||||||||    
T  20351062 gtgttcttttgccaccattcaaa 20351040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 2274482 - 2274599
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | ||| ||    
T  2274482 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttccc 2274581  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  2274582 accattcaaaaccacatt 2274599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 29009364 - 29009247
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  29009364 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 29009265  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  29009264 accattcaaaaccacatt 29009247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 179
Target Start/End: Complemental strand, 36127953 - 36127824
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| |||||| ||||||||||| |||||||||| | |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  36127953 atcatatccatagcctaaactaaccaaataatcaagaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 36127854  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  36127853 tgttcttttgccaccattcaaaaccacatt 36127824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 42903758 - 42903875
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  42903758 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 42903857  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  42903858 accaatcaaaaccacatt 42903875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 46389466 - 46389349
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  46389466 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 46389367  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  46389366 accaatcaaaaccacatt 46389349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 50480352 - 50480469
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  50480352 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 50480451  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  50480452 accaatcaaaaccacatt 50480469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 54386628 - 54386511
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  54386628 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 54386529  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  54386528 accaatcaaaaccacatt 54386511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 49144031 - 49144147
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||| ||||||||| |||||   ||||||    
T  49144031 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atattcaaaatgtgttattttgcc 49144129  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  49144130 accaatcaaaaccacatt 49144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 4178305 - 4178199
Alignment:
Q  68 taaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccacc 164  Q
    |||||||||||||||||||||| ||||||   |  |||||||  |||||||||||||||||||||||| |||  |||||||||| | | |||||| ||||    
T  4178305 taaactaactaaataatcaataaaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaaagtattcaaattatcttcatttgacacc 4178206  T
Q  165 attcaaa 171  Q
    |||||||    
T  4178205 attcaaa 4178199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 34045880 - 34045764
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||| ||| ||||| |||||   ||||||    
T  34045880 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atactcaaaatgtgttattttgcc 34045782  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  34045781 accaatcaaaaccacatt 34045764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 46701593 - 46701710
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||  ||||| ||| |   ||||||    
T  46701593 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatgctcaaaatgtcttattttgcc 46701692  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  46701693 accaatcaaaaccacatt 46701710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 48563297 - 48563219
Alignment:
Q  213 atttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||| |||| |||||||||||||| || ||||||||||||     || || | ||||||||||||||||||||    
T  48563297 atttatcaattcatagactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactc 48563219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Original strand, 15141 - 15420
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  15141 aatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 15240  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||    
T  15241 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaataactacatt 15340  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  15341 catttatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 15420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 2e-93; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 39948155 - 39947876
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||    
T  39948155 aatatacacttaaccaaactataattaacatcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatca 39948056  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||    
T  39948055 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcttttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacatt 39947956  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||||| | ||||||||||||||||| ||  |||||||||||     || || ||||||||||| ||||||||||    
T  39947955 catttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactc 39947876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 15 - 258
Target Start/End: Original strand, 32955877 - 32956118
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaac 114  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |  ||||||||||| |||||||    
T  32955877 aatatacacttac-caaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaa-attgtcattgaggcattttatcaaac 32955974  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||||||    
T  32955975 actttgcgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattataatttaaacaacataggcaacaagtacattcat 32956074  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaatt 258  Q
    |||||||| | ||||||||||||||||| || ||||||||||||    
T  32956075 ttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 32956118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 291
Target Start/End: Complemental strand, 28469192 - 28468917
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||    
T  28469192 atacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaac 28469094  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| |||||| ||||||||     
T  28469093 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaattacattcaa 28468994  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  28468993 ttatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 28468917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 15 - 291
Target Start/End: Complemental strand, 45429145 - 45428867
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatca 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| ||||    
T  45429145 aatatacacttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatca 45429047  T
Q  112 aacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| || ||| |||||||||||||    
T  45429046 aacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacgtaggcaacaactacatt 45428947  T
Q  212 catttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    || ||||||||   ||||||||||||||||| || ||||||||| ||  |  || || ||||||||||| ||||||||||    
T  45428946 caattatcaatttctaaactacacatgcaatcatcaaattgtcattttttaaatcaaccctaaccacatacaaactactc 45428867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 21998737 - 21998466
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  21998737 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 21998639  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||| || ||||| ||||    
T  21998638 tgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaacaaataaattcaattat 21998539  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  21998538 caattactaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 21998466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 22 - 291
Target Start/End: Complemental strand, 17421114 - 17420843
Alignment:
Q  22 acttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactt 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||    
T  17421114 acttaaccaaactataattaacatcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacactt 17421016  T
Q  119 tgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttat 218  Q
      |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||| | ||    
T  17421015 gatgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaacaactacattcaatgat 17420916  T
Q  219 caatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||   ||||||||||||||||| || ||||| ||||||     || || ||||||||||||||||||||||    
T  17420915 caatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatgcaaactactc 17420843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 96 - 291
Target Start/End: Complemental strand, 25965291 - 25965096
Alignment:
Q  96 ttgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacat 195  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||||||    
T  25965291 ttgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaacattcaaagccacattatgatttaaacaacat 25965192  T
Q  196 agacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||  ||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||||||||||||||    
T  25965191 aggaaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactc 25965096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 115 - 291
Target Start/End: Complemental strand, 7185481 - 7185305
Alignment:
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  7185481 actttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaacaactacattcat 7185382  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    |||||||| | ||||| ||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  7185381 ttatcaattcctaaacaacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactc 7185305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 25515366 - 25515494
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||||||||||||||||||||| |||||||||||||||| |   |||||||||| ||||||||||||||||||||||||| ||||||| |||||| |    
T  25515366 atcatttccataacctaaactaactcaataatcaatataattctcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaatcg 25515465  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    || |  |||||||||||||||| |||||||    
T  25515466 tg-ctctttgccaccattcaaaaccacatt 25515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 29401160 - 29401289
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||| ||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  29401160 atcatatccataagctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 29401259  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  29401260 tgttcttttgccaccattcaaaaccacatt 29401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 158
Target Start/End: Original strand, 45136821 - 45136956
Alignment:
Q  15 aatatacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttttgaggcatttgatcaaac 114  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||        ||  |  ||||||||||| |||||||    
T  45136821 aatatacatttaaccaaactataattaacatcatttctatcatttccataacctaaactaaataaa--------attgtcattgaggcattttatcaaac 45136912  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccattt 158  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||    
T  45136913 actttgtgtgcaaagtataaaatatatttaaattgtgttcattt 45136956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 36655906 - 36656035
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| ||| ||   |||| ||||| ||||||||||||||||||||||||| ||||||| ||||| ||    
T  36655906 atcatatccataacctaaactaactaaataatcaataaaatgttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 36656005  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||| ||| |||||||    
T  36656006 tgttcttttgccaccattgaaaaccacatt 36656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 45284683 - 45284560
Alignment:
Q  59 tccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtcca 155  Q
    ||||||| ||||||||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||| ||||||| | ||| ||||| |     
T  45284683 tccataatctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttct 45284584  T
Q  156 tttgccaccattcaaagccacatt 179  Q
    |||||||||||||||| |||||||    
T  45284583 tttgccaccattcaaaaccacatt 45284560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 45292046 - 45291923
Alignment:
Q  59 tccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtcca 155  Q
    ||||||| ||||||||||||||||||||||| |||| |   |||| ||||| ||||||||||||||||||||||||| ||||||| | ||| ||||| |     
T  45292046 tccataatctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttct 45291947  T
Q  156 tttgccaccattcaaagccacatt 179  Q
    |||||||||||||||| |||||||    
T  45291946 tttgccaccattcaaaaccacatt 45291923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 10828581 - 10828710
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||| ||||| |||||||||||||||| |||||||| ||||||| ||||| ||    
T  10828581 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtccaaagtatcaaacatactcaaaatg 10828680  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
     || | |||||||| ||||||| |||||||    
T  10828681 cgttcttttgccacaattcaaaaccacatt 10828710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 20938401 - 20938284
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| ||||| | ||||||    
T  20938401 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 20938302  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  20938301 accattcaaaaccacatt 20938284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 165 - 291
Target Start/End: Original strand, 45137103 - 45137229
Alignment:
Q  165 attcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcattta 264  Q
    |||||| |||||||| | ||||||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||| || ||||||||||||     |    
T  45137103 attcaaggccacattatgatttaaataacataggcaagaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaa 45137202  T
Q  265 taaaacctaaccacatgcaaactactc 291  Q
    | || | ||||||||||||||||||||    
T  45137203 tcaaccttaaccacatgcaaactactc 45137229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 22686930 - 22686863
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatca 86  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  22686930 atacacttaaccaaactataattaacatcatttctaccatttccataa-ctaaactaactaaataatca 22686863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 3940297 - 3940414
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  3940297 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 3940396  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  3940397 accaatcaaaaccacatt 3940414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 5352470 - 5352353
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  5352470 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 5352371  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  5352370 accaatcaaaaccacatt 5352353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 15831633 - 15831516
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| |||||| |||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  15831633 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaagactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 15831534  T
Q  162 accattcaaagccacatt 179  Q
    |||||||||| |||||||    
T  15831533 accattcaaaaccacatt 15831516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 30496515 - 30496632
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  30496515 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 30496614  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  30496615 accaatcaaaaccacatt 30496632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 43979025 - 43978908
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| ||||||||||||||||||||||||| ||||||| ||||| |||||   ||||||    
T  43979025 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 43978926  T
Q  162 accattcaaagccacatt 179  Q
    |||| ||||| |||||||    
T  43978925 accaatcaaaaccacatt 43978908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 35464313 - 35464398
Alignment:
Q  203 aactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaacta 288  Q
    |||||||||||||||| ||| ||||||||||||||||||| || | | |||||||||||  ||||| |||||||||||||||||||    
T  35464313 aactacattcatttataaattcataaactacacatgcaatcatcagaatgtcaattcatacataaatcctaaccacatgcaaacta 35464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 171
Target Start/End: Original strand, 43539306 - 43539415
Alignment:
Q  65 acctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgcc 161  Q
    ||||||||||||||||||||||||| |||| |   |||  ||||| |||||| || ||||||||||||||| ||||||| ||||| |||||   ||||||    
T  43539306 acctaaactaactaaataatcaataaaattgtcattgacacattttatcaaaaacattgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcc 43539405  T
Q  162 accattcaaa 171  Q
    |||| |||||    
T  43539406 accaatcaaa 43539415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 31367415 - 31367308
Alignment:
Q  181 tcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacat 280  Q
    ||||||||||| ||   ||||||| || |||||||||| ||| ||||||||| | ||||||| || ||| | ||||||| |  || || |||||||||||    
T  31367415 tcatttaaacatcaattacaacaaataaattcatttataaattcataaactatatatgcaatcatcaaaatatcaattcctacatcaaccctaaccacat 31367316  T
Q  281 gcaaacta 288  Q
    ||||||||    
T  31367315 gcaaacta 31367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 291
Target Start/End: Original strand, 250 - 525
Alignment:
Q  18 atacacttaatcaaactataattaacatcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaac 114  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| |||| |   |||| ||||| |||||||    
T  250 atacacttaaccaaactataattaacatcatttctatcattttcataac-taaactaactaaataattaataaaattgtcattgagacattttatcaaac 348  T
Q  115 actttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcat 214  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||     
T  349 acgttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaacaactacattcaa 448  T
Q  215 ttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 291  Q
    ||||||||   ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  449 ttatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 63 - 291
Target Start/End: Complemental strand, 7925 - 7694
Alignment:
Q  63 taacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttg 159  Q
    |||||||||||||||||| |||||||| |||| |   |||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  7925 taacctaaactaactaaaaaatcaataaaattgtcattgaggcattttatcaaatactttgtgtgcaaagtataaaacatattcaaattgtgttcatttg 7826  T
Q  160 ccaccattcaaagccacattctcatttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattc 259  Q
    ||| |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||     
T  7825 ccatcattcaaagccacattatgatttaaacaacataggcaacaactacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattt 7726  T
Q  260 atttataaaacctaaccacatgcaaactactc 291  Q
        || || ||||||||||| ||||||||||    
T  7725 tgaaatcaaccctaaccacatacaaactactc 7694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 205 - 293
Target Start/End: Original strand, 40746 - 40834
Alignment:
Q  205 ctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40746 ctacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactcaa 40834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 18489 - 18618
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |   |||||||||| ||||||||||||| ||||||||||| ||||||| ||||| ||    
T  18489 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgcgtgcaaagtatcaaacatactcaaaatg 18588  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||||||| |||||||    
T  18589 tgttcttttgccaccattcaaaaccacatt 18618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 10863 - 10761
Alignment:
Q  61 cataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatt 157  Q
    |||||||||||||||||||||||||||||||||| |   |||| |||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10863 cataacctaaactaactaaataatcaatataattgtcattgagacattttttcaaacactttgtgtgtaaagtataaaacatattcaaattgtgttcatt 10764  T
Q  158 tgc 160  Q
    |||    
T  10763 tgc 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 291
Target Start/End: Complemental strand, 8586 - 8479
Alignment:
Q  184 tttaaacaacatagacaacaactacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgca 283  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| || ||||||||||||     || || ||||||||||||||    
T  8586 tttaaacaacataggcaacaactacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgca 8487  T
Q  284 aactactc 291  Q
    ||||||||    
T  8486 aactactc 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 289
Target Start/End: Original strand, 251091 - 251270
Alignment:
Q  109 tcaaacactttgtgtgcaaagtataaaacatattcaaattgtgtccatttgccaccattcaaagccacattctcatttaaacaacatagacaacaactac 208  Q
    |||| |||||| |||| ||| ||| ||||||||||  |||||||  ||||| ||||||||||| |||||||||  || ||||| ||   ||| |||||||    
T  251091 tcaatcactttatgtgtaaaatatcaaacatattcttattgtgttaatttgacaccattcaaaaccacattcttctt-aaacatcaattacatcaactac 251189  T
Q  209 attcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactac 289  Q
    |||||||||||||| ||||||||||||||||||| || ||| || ||||||||   |||| |||||||| |||||||||||    
T  251190 attcatttatcaattcataaactacacatgcaattatcaaaatgccaattcatacgtaaaccctaaccatatgcaaactac 251270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 246222 - 246180
Alignment:
Q  99 aggcatttgatcaaacactttgtgtgcaaagtataaaacatat 141  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  246222 aggcattttatcaaacactttgggtgcaaagtataaaacatat 246180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 4210 - 4339
Alignment:
Q  53 atcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattg 149  Q
    ||||||| |||| |||||||||||| |||||||||||||||| |   || |||| || |||||||||||||||||||||  || ||||||| ||||| ||    
T  4210 atcattttcataccctaaactaactcaataatcaatataattctcattggggcactttatcaaacactttgtgtgcaaaacatcaaacatactcaaaatg 4309  T
Q  150 tgtccatttgccaccattcaaagccacatt 179  Q
    ||| | |||||||||||| ||| |||||||    
T  4310 tgttcttttgccaccattaaaaaccacatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 4600 - 4660
Alignment:
Q  326 gaaactgcaaaactgaatttatgtttctgaatatgatcagcacgcatcggtagttaactgc 386  Q
    |||||||||||||| | ||||||||||||  |||| |||||||||||||| ||||||||||    
T  4600 gaaactgcaaaactaagtttatgtttctgtttatgttcagcacgcatcggcagttaactgc 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University