View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15352_low_11 (Length: 345)
Name: NF15352_low_11
Description: NF15352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15352_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 13 - 330
Target Start/End: Original strand, 14153833 - 14154151
Alignment:
| Q |
13 |
cataggagcaatgagagtagccatggttatcacagcttgaaatgtttattctatgatctggttatgtaaattgaatgcttttcgatcaaa-gcgatacat |
111 |
Q |
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| T |
14153833 |
cataggagcaatgagagtagccatggttatcacagcttgaaatgtttattatatgatctggttatgtaaattgaatgcttttcgatcaaaagcgatacat |
14153932 |
T |
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| Q |
112 |
atttataataggctcttacaatgtccacggtctacccaagtgaaaaggtaattaagaagattgtgtttttagacctatttttgttaaaaaatcttaaaat |
211 |
Q |
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| T |
14153933 |
atttataataggctcttacaatgtccatggtctacccaagtgaaaaggtaattaagaagattgtgtttttagaccaatttttgttaaaaaatcttaaaat |
14154032 |
T |
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| Q |
212 |
cataaatgaaatcaatatattccttttattgatgaagactcataaggaagtgtttaggtagatgtcacttttactatatttatattcgaggtcctaaaaa |
311 |
Q |
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| T |
14154033 |
cataaatgaaatcaatatattccttttattgatgaagactcataaggaagtgtttaggtagatttcacttttactatatttatatccgatgtcctaaaaa |
14154132 |
T |
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| Q |
312 |
ttaccatctatgttatgaa |
330 |
Q |
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| T |
14154133 |
ttaccatctatgttatgaa |
14154151 |
T |
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