View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15354_high_6 (Length: 308)
Name: NF15354_high_6
Description: NF15354
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15354_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 7 - 292
Target Start/End: Complemental strand, 38923002 - 38922717
Alignment:
| Q |
7 |
aagaatatgaaattgctaaaacaaaaaagaaagcacataccatgatcatgatgatgatcatccactagaattgggtcgattcccaaaacccgtatcagac |
106 |
Q |
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| T |
38923002 |
aagaaaatgaaattgctaaaacaaaaaagaaagcacataccatgatcatgatgatgatcatccactagaattgggtcgattcccaaaacccgtatcagac |
38922903 |
T |
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| Q |
107 |
ccagaaaccttcctcatcctctcattaccgccagacttgggtcgcaagttttccctaagacactcctccctcggcacaaaccctggccgaagatgcggcg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38922902 |
ccagaaaccttcctcatcctctcattaccgccagacttgggtcgcaagttttccctaagacactcctccctcggcacaaaccctggccgaagatgcggcg |
38922803 |
T |
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| Q |
207 |
gcacaaatttaccacttttcaccggcaaactcttctctttctcgccgttcaaaacagggttcggtaaaagacccgacgacaaagaa |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38922802 |
gcacaaatttaccacttttcaccggcaaactcttctctttctcgccgttcaaaacagggttcggtaaaagacccgacgacaaagaa |
38922717 |
T |
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