View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15355_low_6 (Length: 396)

Name: NF15355_low_6
Description: NF15355
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15355_low_6
NF15355_low_6
[»] chr7 (61 HSPs)
chr7 (1-379)||(34440925-34441303)
chr7 (217-288)||(35536034-35536105)
chr7 (195-305)||(9527140-9527250)
chr7 (193-283)||(28165023-28165113)
chr7 (213-277)||(27121654-27121718)
chr7 (193-288)||(991997-992092)
chr7 (184-275)||(7623078-7623169)
chr7 (193-264)||(21453245-21453316)
chr7 (193-264)||(40689034-40689105)
chr7 (193-307)||(27481342-27481456)
chr7 (193-299)||(27548179-27548285)
chr7 (217-271)||(39591539-39591593)
chr7 (215-300)||(3610810-3610895)
chr7 (194-275)||(5006558-5006639)
chr7 (198-277)||(1432017-1432099)
chr7 (193-334)||(22759065-22759208)
chr7 (193-261)||(46825052-46825120)
chr7 (192-276)||(48157167-48157251)
chr7 (194-285)||(1417194-1417285)
chr7 (225-284)||(8960707-8960766)
chr7 (185-248)||(12110327-12110390)
chr7 (217-304)||(19624137-19624224)
chr7 (185-307)||(22387943-22388066)
chr7 (217-288)||(45593791-45593862)
chr7 (215-266)||(47046178-47046229)
chr7 (186-276)||(23918896-23918986)
chr7 (198-264)||(39551601-39551667)
chr7 (214-264)||(43318597-43318647)
chr7 (193-306)||(47177544-47177658)
chr7 (193-282)||(22296276-22296364)
chr7 (219-288)||(24973871-24973940)
chr7 (215-288)||(26935620-26935693)
chr7 (193-286)||(28340892-28340985)
chr7 (215-288)||(33894550-33894622)
chr7 (191-264)||(35266850-35266923)
chr7 (199-276)||(49060479-49060556)
chr7 (225-273)||(43152982-43153030)
chr7 (197-288)||(5628618-5628709)
chr7 (221-288)||(7244629-7244696)
chr7 (226-285)||(21853197-21853256)
chr7 (198-265)||(22283797-22283863)
chr7 (217-264)||(30456522-30456569)
chr7 (197-264)||(34083577-34083644)
chr7 (208-247)||(40428523-40428562)
chr7 (185-248)||(46104342-46104405)
chr7 (236-306)||(753295-753365)
chr7 (215-253)||(30180013-30180051)
chr7 (193-255)||(38010674-38010736)
chr7 (215-264)||(2767248-2767297)
chr7 (215-264)||(12835007-12835056)
chr7 (221-274)||(28178910-28178963)
chr7 (218-303)||(28440431-28440516)
chr7 (193-246)||(39907772-39907825)
chr7 (199-244)||(47795926-47795971)
chr7 (236-284)||(2176840-2176888)
chr7 (236-288)||(5373152-5373204)
chr7 (192-244)||(10190766-10190818)
chr7 (184-276)||(30133988-30134080)
chr7 (193-276)||(44686867-44686951)
chr7 (218-278)||(45813253-45813313)
chr7 (215-307)||(47528003-47528095)
[»] chr1 (83 HSPs)
chr1 (184-307)||(4363671-4363793)
chr1 (182-288)||(44032036-44032142)
chr1 (184-288)||(52286605-52286709)
chr1 (194-273)||(49517012-49517091)
chr1 (182-276)||(48830113-48830207)
chr1 (195-271)||(11211062-11211138)
chr1 (193-288)||(17269177-17269272)
chr1 (215-305)||(4200139-4200229)
chr1 (213-306)||(27140391-27140487)
chr1 (209-305)||(43372023-43372119)
chr1 (215-307)||(49557049-49557141)
chr1 (182-305)||(7273976-7274099)
chr1 (193-255)||(27738228-27738290)
chr1 (215-304)||(37841908-37841998)
chr1 (215-276)||(15360833-15360894)
chr1 (193-262)||(25006082-25006151)
chr1 (193-265)||(9656600-9656672)
chr1 (140-292)||(18420849-18421001)
chr1 (193-284)||(23544687-23544779)
chr1 (193-248)||(6279366-6279421)
chr1 (193-264)||(26630414-26630485)
chr1 (193-248)||(33204436-33204491)
chr1 (193-256)||(34179920-34179983)
chr1 (193-284)||(45999336-45999427)
chr1 (182-256)||(49365798-49365870)
chr1 (198-264)||(31517793-31517859)
chr1 (205-308)||(47877033-47877132)
chr1 (221-266)||(14737781-14737826)
chr1 (215-264)||(15687143-15687192)
chr1 (183-256)||(30371107-30371180)
chr1 (193-246)||(34952184-34952237)
chr1 (192-248)||(10586419-10586475)
chr1 (189-253)||(39976257-39976321)
chr1 (142-274)||(46252679-46252811)
chr1 (215-287)||(46499924-46499996)
chr1 (221-277)||(50319230-50319286)
chr1 (193-276)||(4256091-4256173)
chr1 (223-278)||(4549803-4549858)
chr1 (221-284)||(6976879-6976942)
chr1 (197-284)||(33527199-33527286)
chr1 (215-278)||(34619448-34619511)
chr1 (197-284)||(36070181-36070268)
chr1 (217-276)||(36151577-36151636)
chr1 (172-275)||(37842382-37842485)
chr1 (215-274)||(45990128-45990187)
chr1 (182-288)||(48282060-48282167)
chr1 (221-288)||(48748659-48748725)
chr1 (214-288)||(870972-871046)
chr1 (213-263)||(1879095-1879145)
chr1 (193-256)||(14630014-14630079)
chr1 (215-301)||(15799618-15799704)
chr1 (172-306)||(18434505-18434639)
chr1 (219-321)||(23895230-23895332)
chr1 (194-256)||(28467356-28467418)
chr1 (198-308)||(30259540-30259650)
chr1 (194-264)||(33723431-33723501)
chr1 (185-264)||(38867871-38867952)
chr1 (140-277)||(4700061-4700198)
chr1 (215-264)||(6074425-6074474)
chr1 (213-278)||(7028229-7028294)
chr1 (193-246)||(7218122-7218175)
chr1 (243-292)||(13037787-13037836)
chr1 (225-266)||(13809947-13809988)
chr1 (187-244)||(19462808-19462865)
chr1 (195-248)||(24915101-24915154)
chr1 (220-277)||(29929696-29929753)
chr1 (217-262)||(30815707-30815752)
chr1 (250-299)||(33527339-33527388)
chr1 (222-275)||(40357963-40358016)
chr1 (198-311)||(46980182-46980294)
chr1 (214-255)||(47498905-47498946)
chr1 (180-248)||(1565570-1565638)
chr1 (142-266)||(10199405-10199529)
chr1 (193-306)||(12519016-12519131)
chr1 (192-248)||(15361680-15361736)
chr1 (214-246)||(15784305-15784337)
chr1 (140-244)||(18403191-18403295)
chr1 (215-255)||(28788608-28788648)
chr1 (198-278)||(40304107-40304187)
chr1 (206-266)||(44936651-44936711)
chr1 (217-305)||(45107533-45107620)
chr1 (193-265)||(47002922-47002994)
chr1 (193-277)||(49888705-49888789)
[»] chr2 (67 HSPs)
chr2 (182-291)||(3673731-3673840)
chr2 (193-288)||(18962086-18962181)
chr2 (193-307)||(11513809-11513920)
chr2 (193-254)||(8017395-8017456)
chr2 (193-284)||(10143103-10143194)
chr2 (201-296)||(11344340-11344435)
chr2 (213-288)||(33267584-33267659)
chr2 (197-283)||(2416245-2416331)
chr2 (215-308)||(11393725-11393818)
chr2 (215-308)||(11410386-11410479)
chr2 (193-294)||(17952749-17952850)
chr2 (182-307)||(42817413-42817538)
chr2 (182-278)||(15377702-15377798)
chr2 (218-321)||(13630354-13630457)
chr2 (193-244)||(18066099-18066150)
chr2 (215-306)||(28803576-28803667)
chr2 (193-255)||(9556199-9556261)
chr2 (213-306)||(34339032-34339125)
chr2 (197-301)||(35755554-35755658)
chr2 (197-273)||(39567845-39567921)
chr2 (213-305)||(44600448-44600543)
chr2 (184-255)||(1056392-1056462)
chr2 (225-284)||(3611157-3611216)
chr2 (193-248)||(12464521-12464576)
chr2 (182-264)||(656814-656896)
chr2 (185-235)||(680483-680533)
chr2 (217-306)||(5133683-5133770)
chr2 (197-255)||(34339866-34339924)
chr2 (196-262)||(42592292-42592358)
chr2 (193-283)||(43199346-43199436)
chr2 (197-310)||(1493565-1493678)
chr2 (182-294)||(13864571-13864681)
chr2 (213-258)||(16451082-16451127)
chr2 (185-234)||(25800810-25800859)
chr2 (217-294)||(37053515-37053592)
chr2 (193-262)||(41875701-41875770)
chr2 (199-324)||(3235438-3235563)
chr2 (220-288)||(35809860-35809927)
chr2 (197-284)||(1646945-1647032)
chr2 (221-307)||(32098384-32098473)
chr2 (200-247)||(33944573-33944620)
chr2 (193-284)||(34054949-34055040)
chr2 (219-274)||(40837502-40837557)
chr2 (218-276)||(3423841-3423899)
chr2 (218-308)||(4550684-4550774)
chr2 (182-248)||(9395097-9395163)
chr2 (193-255)||(22681233-22681295)
chr2 (215-285)||(28902007-28902077)
chr2 (234-284)||(29629078-29629128)
chr2 (213-306)||(43808485-43808578)
chr2 (193-271)||(44439408-44439486)
chr2 (213-266)||(3458606-3458659)
chr2 (193-246)||(17221588-17221641)
chr2 (215-284)||(25609727-25609796)
chr2 (195-248)||(28039382-28039435)
chr2 (193-286)||(28933753-28933846)
chr2 (215-288)||(35459837-35459910)
chr2 (216-261)||(36114594-36114639)
chr2 (250-306)||(2400065-2400121)
chr2 (213-277)||(8820341-8820405)
chr2 (268-304)||(9404511-9404547)
chr2 (193-273)||(15866716-15866796)
chr2 (217-269)||(29288613-29288665)
chr2 (193-277)||(29316823-29316907)
chr2 (193-225)||(32848898-32848930)
chr2 (226-278)||(33576675-33576727)
chr2 (184-248)||(43141838-43141902)
[»] chr5 (63 HSPs)
chr5 (184-307)||(29588788-29588910)
chr5 (185-284)||(9202788-9202887)
chr5 (218-334)||(20982208-20982324)
chr5 (217-309)||(37063146-37063238)
chr5 (197-253)||(8158353-8158409)
chr5 (242-306)||(38819672-38819736)
chr5 (195-307)||(39128547-39128659)
chr5 (193-264)||(14295457-14295528)
chr5 (193-278)||(26209461-26209545)
chr5 (172-242)||(7319379-7319449)
chr5 (198-300)||(32059642-32059743)
chr5 (193-307)||(32172561-32172675)
chr5 (192-278)||(33458982-33459068)
chr5 (215-276)||(29117000-29117061)
chr5 (222-306)||(6738484-6738568)
chr5 (193-277)||(7674586-7674670)
chr5 (218-262)||(12595813-12595857)
chr5 (182-285)||(16945020-16945121)
chr5 (182-234)||(32408629-32408681)
chr5 (215-287)||(35135732-35135804)
chr5 (193-248)||(12425538-12425593)
chr5 (256-307)||(27104525-27104576)
chr5 (232-307)||(27106010-27106085)
chr5 (182-293)||(36539668-36539779)
chr5 (193-276)||(38047903-38047986)
chr5 (193-284)||(39105395-39105486)
chr5 (225-288)||(40097483-40097546)
chr5 (222-264)||(10363701-10363743)
chr5 (182-256)||(12975306-12975380)
chr5 (218-276)||(28586839-28586897)
chr5 (182-244)||(35553225-35553287)
chr5 (182-256)||(36639481-36639555)
chr5 (238-307)||(26516206-26516275)
chr5 (213-277)||(465892-465956)
chr5 (215-275)||(985573-985633)
chr5 (239-303)||(10391265-10391329)
chr5 (224-288)||(17756808-17756872)
chr5 (192-288)||(18704083-18704178)
chr5 (193-261)||(26516354-26516422)
chr5 (224-284)||(40048359-40048419)
chr5 (236-307)||(29115304-29115375)
chr5 (182-287)||(34117573-34117675)
chr5 (224-275)||(42583089-42583140)
chr5 (226-264)||(7853609-7853647)
chr5 (222-264)||(10303752-10303794)
chr5 (197-307)||(14716522-14716632)
chr5 (200-282)||(40452224-40452306)
chr5 (216-288)||(912719-912792)
chr5 (184-261)||(2563164-2563241)
chr5 (195-276)||(12407711-12407792)
chr5 (193-278)||(16889672-16889757)
chr5 (195-256)||(18857450-18857511)
chr5 (215-284)||(34112806-34112875)
chr5 (236-277)||(34690812-34690853)
chr5 (219-308)||(35963155-35963244)
chr5 (193-305)||(39141880-39141990)
chr5 (215-307)||(39823191-39823284)
chr5 (217-277)||(4855636-4855696)
chr5 (236-288)||(7096218-7096270)
chr5 (224-256)||(11835236-11835268)
chr5 (215-307)||(14714910-14715001)
chr5 (236-336)||(39257477-39257577)
chr5 (193-245)||(41957499-41957551)
[»] chr3 (63 HSPs)
chr3 (193-302)||(38462194-38462303)
chr3 (184-256)||(37689423-37689495)
chr3 (193-288)||(22232753-22232848)
chr3 (185-264)||(33405207-33405286)
chr3 (182-264)||(52618954-52619036)
chr3 (198-275)||(1395611-1395688)
chr3 (217-266)||(10101548-10101597)
chr3 (217-266)||(10212473-10212522)
chr3 (213-274)||(42809242-42809303)
chr3 (209-288)||(905034-905113)
chr3 (209-264)||(15304411-15304466)
chr3 (221-288)||(44374720-44374787)
chr3 (239-305)||(20173982-20174048)
chr3 (182-284)||(35127408-35127510)
chr3 (225-307)||(39971227-39971309)
chr3 (213-262)||(42808932-42808981)
chr3 (218-294)||(22214754-22214830)
chr3 (188-248)||(25447287-25447347)
chr3 (215-307)||(41028921-41029013)
chr3 (225-276)||(2128331-2128382)
chr3 (193-276)||(3365344-3365427)
chr3 (193-248)||(14145879-14145934)
chr3 (184-247)||(22031164-22031227)
chr3 (225-288)||(36189493-36189556)
chr3 (193-264)||(36783382-36783453)
chr3 (185-288)||(47217284-47217387)
chr3 (223-313)||(3015927-3016016)
chr3 (195-334)||(23785134-23785275)
chr3 (193-247)||(37795564-37795618)
chr3 (222-276)||(48364956-48365010)
chr3 (217-266)||(10357382-10357431)
chr3 (182-247)||(20170745-20170810)
chr3 (200-245)||(21367824-21367869)
chr3 (193-292)||(24158551-24158649)
chr3 (187-288)||(32095233-32095334)
chr3 (192-264)||(34254855-34254928)
chr3 (215-264)||(49586986-49587035)
chr3 (215-287)||(8007765-8007837)
chr3 (238-306)||(16790181-16790249)
chr3 (217-293)||(33307652-33307728)
chr3 (185-277)||(52440702-52440794)
chr3 (194-341)||(21574366-21574511)
chr3 (193-264)||(24887331-24887402)
chr3 (193-288)||(27792799-27792894)
chr3 (210-305)||(32703048-32703143)
chr3 (193-264)||(36646430-36646501)
chr3 (201-264)||(45432995-45433058)
chr3 (197-248)||(48286862-48286913)
chr3 (215-308)||(21862245-21862339)
chr3 (182-248)||(23315593-23315659)
chr3 (218-283)||(20192679-20192744)
chr3 (189-277)||(23815991-23816076)
chr3 (219-264)||(26990685-26990730)
chr3 (182-256)||(33965526-33965602)
chr3 (191-276)||(37788800-37788884)
chr3 (195-240)||(45264416-45264461)
chr3 (224-305)||(49772747-49772828)
chr3 (193-245)||(1217848-1217900)
chr3 (198-266)||(23952159-23952227)
chr3 (193-273)||(24235731-24235811)
chr3 (198-234)||(33306776-33306812)
chr3 (221-277)||(40122828-40122884)
chr3 (219-307)||(51455852-51455939)
[»] chr8 (63 HSPs)
chr8 (193-308)||(31884501-31884616)
chr8 (183-308)||(787144-787269)
chr8 (193-339)||(4558674-4558820)
chr8 (184-306)||(28769378-28769500)
chr8 (215-302)||(37444485-37444573)
chr8 (189-285)||(38874576-38874672)
chr8 (215-278)||(1112790-1112853)
chr8 (236-307)||(34563158-34563229)
chr8 (217-307)||(29699162-29699252)
chr8 (217-302)||(7026644-7026729)
chr8 (192-277)||(12361130-12361215)
chr8 (215-256)||(42237492-42237533)
chr8 (196-277)||(42597339-42597420)
chr8 (189-277)||(7514516-7514604)
chr8 (236-340)||(11119090-11119194)
chr8 (194-277)||(3936787-3936870)
chr8 (172-283)||(12224926-12225037)
chr8 (225-288)||(14482129-14482192)
chr8 (193-248)||(28784843-28784898)
chr8 (197-248)||(35374425-35374476)
chr8 (192-307)||(35869745-35869860)
chr8 (221-288)||(40280281-40280348)
chr8 (198-256)||(8909009-8909067)
chr8 (193-287)||(11188203-11188297)
chr8 (201-307)||(12972764-12972870)
chr8 (182-288)||(13652142-13652248)
chr8 (182-288)||(13710785-13710891)
chr8 (218-284)||(26215427-26215493)
chr8 (191-265)||(27049318-27049391)
chr8 (193-274)||(1470904-1470985)
chr8 (195-276)||(7646145-7646226)
chr8 (219-334)||(8536123-8536237)
chr8 (182-303)||(11813142-11813263)
chr8 (215-284)||(14280471-14280540)
chr8 (225-274)||(32976358-32976407)
chr8 (193-254)||(34770853-34770914)
chr8 (196-248)||(778356-778408)
chr8 (224-284)||(21653012-21653072)
chr8 (182-306)||(29056028-29056151)
chr8 (193-308)||(44617837-44617950)
chr8 (193-248)||(6509351-6509406)
chr8 (193-284)||(10114421-10114511)
chr8 (215-274)||(16210956-16211015)
chr8 (221-264)||(27119984-27120027)
chr8 (225-284)||(37152970-37153029)
chr8 (217-256)||(44168517-44168556)
chr8 (226-288)||(30627983-30628045)
chr8 (236-298)||(40356788-40356850)
chr8 (182-247)||(7918810-7918875)
chr8 (225-305)||(26716518-26716596)
chr8 (211-248)||(29262940-29262977)
chr8 (217-306)||(35453695-35453784)
chr8 (219-288)||(41620365-41620434)
chr8 (200-248)||(773296-773344)
chr8 (200-248)||(787790-787838)
chr8 (215-263)||(3537101-3537149)
chr8 (193-308)||(8062430-8062546)
chr8 (193-241)||(29342259-29342307)
chr8 (183-239)||(30043784-30043840)
chr8 (192-248)||(33209267-33209323)
chr8 (193-288)||(35298525-35298621)
chr8 (218-297)||(41475133-41475213)
chr8 (182-246)||(42215119-42215182)
[»] scaffold0024 (3 HSPs)
scaffold0024 (193-307)||(27484-27598)
scaffold0024 (213-277)||(21346-21410)
scaffold0024 (213-246)||(58906-58939)
[»] chr6 (57 HSPs)
chr6 (217-307)||(8349736-8349826)
chr6 (192-278)||(29274276-29274362)
chr6 (195-284)||(9093606-9093695)
chr6 (193-264)||(1402947-1403018)
chr6 (193-284)||(4006645-4006736)
chr6 (215-341)||(7713899-7714025)
chr6 (197-303)||(22742278-22742384)
chr6 (199-307)||(5550040-5550148)
chr6 (184-307)||(2206498-2206621)
chr6 (225-307)||(6654522-6654605)
chr6 (215-306)||(7351678-7351769)
chr6 (184-287)||(11340664-11340767)
chr6 (229-319)||(4248854-4248944)
chr6 (218-276)||(24836272-24836330)
chr6 (187-284)||(9559584-9559680)
chr6 (193-306)||(32975887-32976000)
chr6 (195-307)||(2514610-2514722)
chr6 (193-285)||(20671913-20672005)
chr6 (195-306)||(33068610-33068722)
chr6 (193-256)||(281896-281959)
chr6 (215-278)||(507157-507220)
chr6 (193-288)||(10016472-10016567)
chr6 (213-288)||(32386167-32386242)
chr6 (217-288)||(32386635-32386706)
chr6 (194-264)||(769090-769160)
chr6 (222-307)||(9732384-9732469)
chr6 (209-262)||(29940749-29940802)
chr6 (220-307)||(1497888-1497976)
chr6 (189-277)||(24476540-24476628)
chr6 (180-248)||(28088257-28088325)
chr6 (195-287)||(33259744-33259836)
chr6 (185-277)||(33736776-33736868)
chr6 (217-288)||(3217262-3217333)
chr6 (182-253)||(3785737-3785808)
chr6 (221-272)||(10728575-10728626)
chr6 (217-264)||(10749300-10749347)
chr6 (209-288)||(21959655-21959734)
chr6 (193-248)||(25426137-25426192)
chr6 (211-262)||(27595633-27595684)
chr6 (193-248)||(31671122-31671177)
chr6 (197-307)||(3155084-3155194)
chr6 (218-288)||(8420270-8420340)
chr6 (217-307)||(9027485-9027575)
chr6 (218-264)||(30537019-30537065)
chr6 (241-307)||(31668781-31668847)
chr6 (182-264)||(33787782-33787864)
chr6 (187-256)||(2735028-2735097)
chr6 (215-288)||(4325378-4325451)
chr6 (195-244)||(7485118-7485167)
chr6 (215-288)||(10452430-10452503)
chr6 (211-248)||(27615339-27615376)
chr6 (211-248)||(27693505-27693542)
chr6 (215-256)||(28621180-28621221)
chr6 (215-248)||(34611839-34611872)
chr6 (182-254)||(3181105-3181177)
chr6 (226-302)||(24332856-24332931)
chr6 (218-278)||(31624195-31624255)
[»] chr4 (80 HSPs)
chr4 (185-253)||(51630073-51630141)
chr4 (197-306)||(25409795-25409904)
chr4 (215-288)||(30024627-30024700)
chr4 (193-298)||(54325085-54325190)
chr4 (213-288)||(22684584-22684659)
chr4 (182-245)||(28300336-28300399)
chr4 (197-286)||(8130103-8130192)
chr4 (215-276)||(26883934-26883995)
chr4 (193-278)||(29263307-29263392)
chr4 (193-277)||(6364087-6364171)
chr4 (194-294)||(30207620-30207719)
chr4 (195-278)||(30338641-30338725)
chr4 (193-304)||(44319861-44319971)
chr4 (217-335)||(24193465-24193583)
chr4 (189-278)||(24160927-24161016)
chr4 (185-265)||(47119005-47119085)
chr4 (184-272)||(49219082-49219170)
chr4 (190-253)||(437477-437540)
chr4 (193-256)||(6978757-6978820)
chr4 (215-307)||(8703690-8703784)
chr4 (192-307)||(24443946-24444061)
chr4 (215-278)||(27043900-27043963)
chr4 (195-274)||(31038917-31038996)
chr4 (185-248)||(32421072-32421135)
chr4 (199-278)||(47946135-47946214)
chr4 (212-275)||(49803151-49803214)
chr4 (185-275)||(3155543-3155633)
chr4 (182-264)||(17884019-17884101)
chr4 (182-264)||(29778747-29778828)
chr4 (182-248)||(35290224-35290290)
chr4 (221-307)||(35727109-35727195)
chr4 (223-293)||(47970240-47970310)
chr4 (196-307)||(50298438-50298546)
chr4 (196-262)||(53626729-53626795)
chr4 (215-264)||(4071833-4071882)
chr4 (193-262)||(26520277-26520346)
chr4 (194-247)||(40174531-40174584)
chr4 (182-265)||(47800580-47800656)
chr4 (224-307)||(485989-486073)
chr4 (221-288)||(4191666-4191734)
chr4 (172-288)||(5219527-5219643)
chr4 (187-279)||(29373929-29374021)
chr4 (189-253)||(42685386-42685450)
chr4 (222-277)||(5131309-5131364)
chr4 (225-284)||(7601690-7601749)
chr4 (197-284)||(11389457-11389544)
chr4 (193-288)||(18630607-18630702)
chr4 (197-244)||(24091434-24091481)
chr4 (221-339)||(25548182-25548298)
chr4 (206-286)||(28623218-28623300)
chr4 (213-256)||(41701509-41701552)
chr4 (193-256)||(43372017-43372080)
chr4 (193-256)||(52746888-52746951)
chr4 (218-288)||(19422345-19422415)
chr4 (196-262)||(22662298-22662364)
chr4 (196-262)||(22666777-22666843)
chr4 (142-276)||(23819029-23819162)
chr4 (218-256)||(42321952-42321990)
chr4 (210-276)||(44119227-44119293)
chr4 (198-288)||(45128363-45128453)
chr4 (226-308)||(51555948-51556030)
chr4 (182-264)||(52735073-52735155)
chr4 (215-248)||(13949914-13949947)
chr4 (193-234)||(20907328-20907369)
chr4 (197-262)||(25885812-25885877)
chr4 (193-246)||(27321877-27321930)
chr4 (193-278)||(53155202-53155285)
chr4 (215-272)||(54327519-54327576)
chr4 (193-253)||(3175913-3175973)
chr4 (209-285)||(4663760-4663836)
chr4 (215-306)||(8422909-8422998)
chr4 (218-266)||(11917508-11917556)
chr4 (206-246)||(21952930-21952970)
chr4 (209-297)||(32724037-32724125)
chr4 (196-256)||(35411064-35411123)
chr4 (191-243)||(44138712-44138764)
chr4 (216-276)||(44249225-44249285)
chr4 (184-244)||(46715036-46715096)
chr4 (197-284)||(49004024-49004109)
chr4 (221-276)||(51044534-51044590)
[»] scaffold0590 (1 HSPs)
scaffold0590 (216-321)||(1145-1250)
[»] scaffold0275 (1 HSPs)
scaffold0275 (216-321)||(2725-2830)
[»] scaffold0549 (2 HSPs)
scaffold0549 (184-287)||(1763-1866)
scaffold0549 (184-287)||(3853-3956)
[»] scaffold0100 (1 HSPs)
scaffold0100 (187-308)||(42524-42644)
[»] scaffold0103 (1 HSPs)
scaffold0103 (220-275)||(51508-51563)
[»] scaffold0508 (1 HSPs)
scaffold0508 (217-307)||(9847-9937)
[»] scaffold0654 (1 HSPs)
scaffold0654 (221-299)||(6713-6791)
[»] scaffold0221 (1 HSPs)
scaffold0221 (218-284)||(20226-20292)
[»] scaffold0014 (1 HSPs)
scaffold0014 (221-299)||(116632-116710)
[»] scaffold0428 (1 HSPs)
scaffold0428 (195-287)||(3832-3924)


Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Complemental strand, 34441303 - 34440925
Alignment:
Q  1 gacaatattgaatttgtaacaattgacaagtaggaaatctactaagacaaaaatttacaaattgcattctaagagcgtgtttgggttgattagtttgaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |    
T  34441303 gacaatattgaatttgtaacaattgacaagtaggaaatctactaagacaaaaatttacaaattatattctaagagcgtgtttgggttgattagtttgagc 34441204  T
Q  101 ttatttattagcgtttgagaaaacttatggaaataggttatttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagctta 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34441203 ttatttattggcgtttgagaaaacttatggaaataggttatttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagctta 34441104  T
Q  201 tgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatg 300  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||    
T  34441103 tgaaaatagtttacagcttatatgcaaacaatttaactttattttatcgtttgttagaggaataacgtatacataagcccttatacgacaagtgttcatg 34441004  T
Q  301 ctataagtactaaatgaagtttttaatgcaaacaagacctagttttctcctgtaaattttacatatgtataatataact 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34441003 ctataagtactaaatgaagtttttaatgcaaacaagacctagttttctcctgtaaattttacatatgtataatataact 34440925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 288
Target Start/End: Complemental strand, 35536105 - 35536034
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||| ||||||||||||| | ||||| ||||||| | |||||||||||| ||||||||    
T  35536105 cttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatga 35536034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 9527140 - 9527250
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 294  Q
    |||||||||||| |  ||| || ||||||||||||| ||| |||||||| |||| ||||||| ||| ||| |||||| |||||| ||| ||||| |||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataagtg 9527239  T
Q  295 tttatgctata 305  Q
    ||||| |||||    
T  9527240 tttatactata 9527250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 28165113 - 28165023
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||||||| || | |||||| ||||||||| |||||||||| |||| |||||||| ||||||| ||||| ||| ||||||||||| ||||    
T  28165113 atagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 27121654 - 27121718
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| | ||||||||||    
T  27121654 acagcttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 992092 - 991997
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| |||||| | |||||||||||| | |||  |||||||||||  ||||||| ||||| ||| ||||| ||||| |||||||||    
T  992092 atagcttatgaaaaaagtttataccttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatga 991997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 7623169 - 7623078
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    |||||||| |||| |||||||||||| ||||||||||||| |||| | ||  ||||||||||| | ||||||| | ||||||| ||||||||    
T  7623169 ctcttcaagatagtttatgaaaatagcttacagcttatataaaaagagttggactttattttaccttttgttataaaaataacttatacata 7623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 21453316 - 21453245
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| |||||| ||||||||||| ||||| || ||||||| ||||| ||||||| |||||||    
T  21453316 atagcttatgaaaacagtttatagcttatatgagaacaacttgactttatcttatcttttgttacagaaata 21453245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 40689034 - 40689105
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||| |||| || |||||||    
T  40689034 atagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttttgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 27481342 - 27481456
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||||||||||||  ||| |||||||||| ||||| ||| ||||  ||||||| ||||||| ||||||| | ||||||||| | ||||||| | ||     
T  27481342 atagcttatgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataaa 27481441  T
Q  293 tgtttatgctataag 307  Q
      |||||||||||||    
T  27481442 catttatgctataag 27481456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 299
Target Start/End: Complemental strand, 27548285 - 27548179
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| || ||| |||||| ||||||||||||  ||||||||||||| |||| ||  |||||| | |||| |||||| |||||| || ||     
T  27548285 atagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcacttataagataaa 27548186  T
Q  293 tgtttat 299  Q
    |||||||    
T  27548185 tgtttat 27548179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 39591539 - 39591593
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  39591539 cttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 3610810 - 3610895
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatg 300  Q
    ||||||||  |||||| |||  ||| |||||||| ||||||  ||||||| | ||||||||||| |||||||||||||||||||||    
T  3610810 agcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataagcacttatatgacaagtgtttatg 3610895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 275
Target Start/End: Original strand, 5006558 - 5006639
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||||||||| | |||| | |||||||||||||| ||| ||||||||||||| ||||||| || |||| | ||||||||    
T  5006558 tagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 1432017 - 1432099
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaacttt---attttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||| || | | |||||||||||||| |||||||||||   |||||||| ||||||| ||||||||| ||||||||||    
T  1432017 ttatgaaaacagctgatagcttatatgaaaataatttaacttttttattttatcttttgttatagaaataacttatacataag 1432099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 334
Target Start/End: Complemental strand, 22759208 - 22759065
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg--aca 290  Q
    |||||||||||||  || ||  ||||||||||||||||||||  |||||||||||| ||||||| | ||||| | || |||||| | ||||||||  | |    
T  22759208 atagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataaa 22759109  T
Q  291 agtgtttatgctataagtactaaatgaagtttttaatgcaaaca 334  Q
    | ||||||| |||||||| || ||| ||||| || || ||||||    
T  22759108 aatgtttatactataagtgcttaattaagttgtttatccaaaca 22759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 46825120 - 46825052
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaa 261  Q
    ||||||||||||||  |||||  ||||||||||||||||||| ||||||||||||| ||| ||| ||||    
T  46825120 atagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatctttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 48157167 - 48157251
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||| |||||| |  ||| ||||||||| |||||||||| ||||||||||||| ||| ||| ||||||||  |||||||||    
T  48157167 aatagcttgtgaaaacaaattatagcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataa 48157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 285
Target Start/End: Complemental strand, 1417285 - 1417194
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    ||||||||||||| |  |||  ||||||||||||||||||| ||||||||||||| ||||||| | |||||   ||||||||| ||| ||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaacccgtata 1417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 8960707 - 8960766
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||||||||||||| |||| || || |||| | |||||||||||||||||    
T  8960707 aaaacaatttaactttattttatcatttgctataggaatagcatatacataagcccttat 8960766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 12110390 - 12110327
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| |||||||||||||| || ||| ||||||||  |||||||||| |||||||||||||    
T  12110390 tcttcaagatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatc 12110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 304
Target Start/End: Complemental strand, 19624224 - 19624137
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctat 304  Q
    |||||||||||| | ||| ||||||||||  | | | ||| ||||||| | |||| |||||||||||||||| |||||||||||||||    
T  19624224 cttatatgaaaatagttttactttattttgccttatcttatagaaatatcttatatataagcccttatatgataagtgtttatgctat 19624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 307
Target Start/End: Original strand, 22387943 - 22388066
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttat---tttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||||||||| |||| ||| || |||| ||||||| |||||| ||||| |||||||   |||||| ||||||| ||||||| | ||| ||||||| ||    
T  22387943 tcttcaaaatagtttataaaacta-tttatagcttat-tgaaaagaatttgactttatacttttatcttttgttatagaaatagcttatccataagcact 22388040  T
Q  282 tatatgacaagtgtttatgctataag 307  Q
    || |||| ||||||||||| ||||||    
T  22388041 taaatgataagtgtttatgttataag 22388066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 45593791 - 45593862
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| ||| ||||||||||||  ||||||| ||||||| | |||||||||||  ||||||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatga 45593862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 47046178 - 47046229
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||||||||| ||||||||||||| ||||||  |||||||||    
T  47046178 agcttatatgaaaacaatttgactttattttatcctttgttgtagaaataac 47046229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 23918986 - 23918896
Alignment:
Q  186 cttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||| ||||| ||||||  | || ||| |||||||||||||||||||| ||||||||||||| ||||| | ||| ||||| || ||||||    
T  23918986 cttcagaatagtttatgattacagattatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataa 23918896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 39551601 - 39551667
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||| ||| |||||||||||||||| ||| |||||| | |||| ||||||| |||||||    
T  39551601 ttatgaaaatagattatagcttatatgaaaacagttttactttagtatatcttttgttatagaaata 39551667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 43318597 - 43318647
Alignment:
Q  214 cagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||| |||||||| ||||||||||||| ||||||| |||||||    
T  43318597 cagcttatatgataacaatttgactttattttatcatttgttatagaaata 43318647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 47177658 - 47177544
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaa 291  Q
    ||||||| |||||| || ||| |||||||||||||||||||||||||| |||| |  |||| || ||||||| | |||||| |||  ||||| || | ||    
T  47177658 atagcttttgaaaacagcttatagcttatatgaaaacaatttaactttgttttgtattttgatatagaaataccttatacagaagggcttatcatcataa 47177559  T
Q  292 gtgtttatgctataa 306  Q
    ||| |||||||||||    
T  47177558 gtgcttatgctataa 47177544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 22296276 - 22296364
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctt 282  Q
    |||| ||||||||| | |||| || ||||| ||||| ||||||||||||||||||| || | || |||||||||  ||||||||||||||    
T  22296276 atagtttatgaaaacaatttataggttataggaaaataatttaactttattttatc-ttcgctatagaaataacaaatacataagccctt 22296364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 24973940 - 24973871
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||| ||||||||| | ||||||||||| ||||||| ||||||| | | ||||||||| |||||||||    
T  24973940 tatatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatga 24973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 26935620 - 26935693
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||| |||||||||||||||||| |||||||||| ||||||| | ||||| | || ||| |||| |||||||||    
T  26935620 agctcatatgaaaacaatttaaccttattttatcatttgttataaaaatagcttacacaaaagcacttatatga 26935693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 286
Target Start/End: Original strand, 28340892 - 28340985
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    |||||||||||||| || ||| ||||||||||| |||||||| |||| |||| ||| ||| ||| | ||||| | |||| |||||| |||||||    
T  28340892 atagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatcttttattataaaaatagcatatagataagcacttatat 28340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 33894622 - 33894550
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||| ||| |||| |||||||| ||||||| ||||||| | ||||||||||| |||| ||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcacttacatga 33894550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 35266923 - 35266850
Alignment:
Q  191 aaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||| ||||||| | |||| |  ||||||||||| ||||||||||||||| ||| ||||||| |||||||    
T  35266923 aaatagctcatgaaaacattttataatttatatgaaaaaaatttaactttatttaatcatttgttatagaaata 35266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 49060556 - 49060479
Alignment:
Q  199 tatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||  ||| ||||||||| |||| ||||| ||||||||||||  ||||||| ||||||| | |||||||||    
T  49060556 tatgaaaataacttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataa 49060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 43152982 - 43153030
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtataca 273  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 5628618 - 5628709
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||| || ||| | |||| ||||||||| || |||| ||||||||| ||||||| | ||||| | ||| ||||||||||| |||||    
T  5628618 cttatgaaaacagcttatatcttaaatgaaaacagttcaactctattttatcatttgttataaaaatagcttatgcataagcccttgtatga 5628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 7244696 - 7244629
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||| ||| ||||| ||||||| |||| || ||||||| | ||||||||||| |||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatga 7244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 21853197 - 21853256
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    ||||||||||||||||||||||| ||||| | ||||||||| |||| |||| | ||||||    
T  21853197 aaacaatttaactttattttatcttttgtaatagaaataacttatatataatcacttata 21853256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 22283797 - 22283863
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    ||||||||| |||||| |||| |||  |||||||||||||||||||||||| |||| || ||||||||    
T  22283797 ttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatc-tttgctatagaaataa 22283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 30456522 - 30456569
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||||||| ||||||||||||| ||||||  |||||||    
T  30456522 cttatatgaaaacaatttgactttattttatcttttgttttagaaata 30456569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 34083577 - 34083644
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||| || ||| ||||||||   ||||||||||||||||||||||| |||| || |||||||    
T  34083577 cttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 40428562 - 40428523
Alignment:
Q  208 agtttacagcttatatgaaaacaatttaactttattttat 247  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  40428562 agtttatagcttatatgaaaataatttaactttattttat 40428523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 46104342 - 46104405
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| ||| |||||||||| |||||| |||||||| ||||||| ||||  |||||||||||    
T  46104342 tcttcaagataacttatgaaaacagtttatagcttatacgaaaacagtttagatttattttatc 46104405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 753295 - 753365
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||||| ||  ||||||| |||||||  ||||||| |||| ||||||||| || ||||||||||||||    
T  753295 actttatttcatattttgttatagaaatagtgtatacacaagcgcttatatgataaatgtttatgctataa 753365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 30180051 - 30180013
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  30180051 agcttatacgaaaacaatttaactttattttatcttttg 30180013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 38010736 - 38010674
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||| ||||||||| || ||| ||||||||||||||||||||  |||| ||||||| ||||||    
T  38010736 atagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgtt 38010674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 2767248 - 2767297
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||| |||||||||||||  ||||||||||| ||||||| |||||||    
T  2767248 agcttatgtgaaaacaatttatatttattttatcttttgttatagaaata 2767297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 12835007 - 12835056
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||| ||||||||||||||| ||||||||||||| ||||||  |||||||    
T  12835007 agctaatatgaaaacaatttgactttattttatcttttgttgtagaaata 12835056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||||||||||| | ||||||||||||| ||||||| ||||||| | |||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 28440516 - 28440431
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgcta 303  Q
    ||||| |||||| |||| ||||||||||||| |||||||  |||||| | ||| | ||| | |||||||||  |||||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgttactgaaatagcttattcttaatcgcttatatgattagtgtttatgcta 28440431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 39907825 - 39907772
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||| ||||||||| |||||| ||||||||  ||||||||||||| ||||||||    
T  39907825 atagtttatgaaaacagtttatagcttatacaaaaacaatttaaccttatttta 39907772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 47795971 - 47795926
Alignment:
Q  199 tatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||||||| |||||| ||||||||| ||||||||||||||| ||||    
T  47795971 tatgaaaacagtttatagcttatataaaaacaatttaacttaattt 47795926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 2176888 - 2176840
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||||||||| |||||||  ||||||  ||||||||||||||||||    
T  2176888 actttattttatcttttgttactgaaatagtgtatacataagcccttat 2176840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 5373204 - 5373152
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||| |||| ||||    
T  5373204 actttattttatcttttgttatagaaatagcatatacataagcacttacatga 5373152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 10190818 - 10190766
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    ||||| ||||||||| | ||||||| ||||||||||||| ||| |||||||||    
T  10190818 aatagtttatgaaaacaatttacagtttatatgaaaacagtttgactttattt 10190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 30134080 - 30133988
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||| ||| ||| |||||  || ||| |||||||| |||||||| || ||||||||||||| ||||||  | ||||| | |||||||||    
T  30134080 ctcttcaagataacttgtgaaatcagcttaaagcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataa 30133988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 44686951 - 44686867
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaacttta-ttttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||||| | || | |||||| ||||||| ||| |||||| |||| |  ||||||| |||||||| ||||||||||    
T  44686951 atagcttatgaaaatattgtataccttataagaaaacattttcactttatttttgtattttgttaaagaaataatgtatacataa 44686867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 45813253 - 45813313
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||||||||| || ||||||||||||| |||| || ||||||| | |||| ||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagc 45813313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 47528003 - 47528095
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| | |||||| || || ||||||||||| ||  ||| ||||||| | ||||||||| | ||| ||| | ||||||||||||||||||    
T  47528003 agcttatgtaaaaacagttgaattttattttatccttaattatagaaatagcttatacataaacacttgtataataagtgtttatgctataag 47528095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 184 - 307
Target Start/End: Original strand, 4363671 - 4363793
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||| ||| || |||||| ||| ||||||| | |||||  |||||||||||| ||||    
T  4363671 ctcttcaggatagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatcttttgttata-aaatagagtatacataagcactta 4363769  T
Q  284 tatgacaagtgtttatgctataag 307  Q
    ||||||||||||||||||||||||    
T  4363770 tatgacaagtgtttatgctataag 4363793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 44032036 - 44032142
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||||||| ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||| | ||||||| |||||   | ||||||||| | ||    
T  44032036 agctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacact 44032135  T
Q  282 tatatga 288  Q
    |||||||    
T  44032136 tatatga 44032142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 288
Target Start/End: Complemental strand, 52286709 - 52286605
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||||||| ||  ||||||||||||||||| ||||||||||||||   ||||||||||||||||| ||||||  ||||||| | ||| ||||||| ||||    
T  52286709 ctcttcaagatgacttatgaaaatagtttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgctta 52286610  T
Q  284 tatga 288  Q
    |||||    
T  52286609 tatga 52286605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 194 - 273
Target Start/End: Complemental strand, 49517091 - 49517012
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtataca 273  Q
    ||||||||||||| || ||| |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 276
Target Start/End: Original strand, 48830113 - 48830207
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||| | ||||||||||||||| |||||| |||||||||||||| | ||| ||||||||||||| || || | ||||||||| |||||||||    
T  48830113 agctctttagaatagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 11211138 - 11211062
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||||||||||||||  | |||||||||||| ||||||||||||||||||| ||||||  ||||||||| ||||    
T  11211138 agcttatgaaaatagtttttatcttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 17269272 - 17269177
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| |  |||  ||||||||||||||||||| ||||||||||  | ||||||  ||||||||| ||||||||||| |||||||||    
T  17269272 atagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 305
Target Start/End: Complemental strand, 4200229 - 4200139
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    ||||||||||||||||| || ||||||||||||| ||||||| | ||||||| |||| |||| | |||| |||| ||||| ||||||||||    
T  4200229 agcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttatgctata 4200139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 27140487 - 27140391
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct---tatatgacaagtgtttatgctataa 306  Q
    ||||||||||| ||||||||||||  |||||||||| ||||||| ||||||||| || |||||| | ||   ||||||| |||||||||||||||||    
T  27140487 acagcttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataaacacttagtatatgataagtgtttatgctataa 27140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 43372023 - 43372119
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    ||||| ||||||| |||||| ||||| ||| |||||||||  |||||| ||||||| | |||||||||||| |||||||| ||| | ||||||||||    
T  43372023 gtttatagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataagccattatatgataagcgcttatgctata 43372119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 49557141 - 49557049
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||||| ||||| || |||||||||||||||||| ||||||| ||||||||| ||||||  ||| ||||||||| ||||| ||| | ||||||    
T  49557141 agcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatacagcagcacttatatgataagtgattacgttataag 49557049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 7273976 - 7274099
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||||||||  ||| ||||| ||| || ||| | ||| |||||||||||||| ||||||||| ||| ||||||| | ||||||| |||||||||||  |    
T  7273976 agctcttcaaggtagtttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatt 7274075  T
Q  282 tatatgacaagtgtttatgctata 305  Q
    ||||||| |||   ||||||||||    
T  7274076 tatatgataagcacttatgctata 7274099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 27738228 - 27738290
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||||||||||||| |  ||| |||||||||||||||||||| ||||||||||||| ||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatcttttgtt 27738290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 37841998 - 37841908
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctat 304  Q
    |||||||| ||||||||||||||||||||||||| ||||||| || |||| | ||||||| ||  ||||| |||| ||||| |||||||||    
T  37841998 agcttatacgaaaacaatttaactttattttatcatttgttataggaatagcttatacatgagtacttatcatgataagtgcttatgctat 37841908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 15360894 - 15360833
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| |||||||||  ||||||||    
T  15360894 agcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataa 15360833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 25006082 - 25006151
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||||| |  ||| |||||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  25006082 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttaccgtctgttatagaaa 25006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 265
Target Start/End: Complemental strand, 9656672 - 9656600
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    |||||||||||| | || ||| |||||||||||||| ||||||||||||||||||  |||| || ||||||||    
T  9656672 atagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttttgctatagaaataa 9656600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 292
Target Start/End: Original strand, 18420849 - 18421001
Alignment:
Q  140 atttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactt 239  Q
    ||||||||||||||||| |  |||| |||   ||||||| | |||||| ||| ||| ||| |||||||||  || ||||||||||| |||| ||| ||||    
T  18420849 atttatgacatgtttataaagtgttctcaacttatttttgtaagctctccaagataacttgtgaaaatagcatatagcttatatgagaacattttgactt 18420948  T
Q  240 tattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||||| |||||   |||||||    ||||| |||| |||||||||||||    
T  18420949 tattttatcttttgtgctagaaataggtaatacacaagcacttatatgacaag 18421001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 23544687 - 23544779
Alignment:
Q  193 atagcttatgaaaatagtttac-agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||| ||||||  |||||||||||||||||||| |||| |||||||| |||   | ||||||| | ||||||||||| |||||    
T  23544687 atagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagcgcttat 23544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 6279421 - 6279366
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||||||||||||| |||||||| |||||||||||   |||||||||||    
T  6279421 atagcttatgaaaatagtttaaagcttatacgaaaacaatttgtttttattttatc 6279366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 26630485 - 26630414
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||| ||| |||| |||||| |||||||||||||||||||| ||||||||| ||  ||||||| |||||||    
T  26630485 atagcgtatcaaaacagtttatagcttatatgaaaacaattttactttatttcattttttgttatagaaata 26630414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 33204436 - 33204491
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||| || |||||||||||| ||||| || ||||||||||||||||    
T  33204436 atagcttatgaaaacagcttacagcttatacgaaaataaattaactttattttatc 33204491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 34179920 - 34179983
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||| ||||||||| |||||| |||||| || |||||||||| ||||||||||||| |||||||    
T  34179920 atagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatcttttgtta 34179983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 45999336 - 45999427
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||| |||||| | ||| ||||||||||||| || ||| ||||||| ||||| ||||||| ||||||| | ||||||| ||| |||||    
T  45999336 atagcttacgaaaattggttatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 49365798 - 49365870
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||| |||||||||  ||| |||||| ||||| |||||||||||||| ||| ||||||||| |||||||    
T  49365798 agctcttcaagatagcttat--aaacagtttatagcttgtatgaaaacaatttgactctattttatcttttgtta 49365870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 31517793 - 31517859
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||| | || ||| ||||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  31517793 ttatgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 308
Target Start/End: Complemental strand, 47877132 - 47877033
Alignment:
Q  205 aatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctat 304  Q
    ||||| ||| || ||||||||||||||||| | ||||||||||| |||||||  ||||||    ||||||||||  |||||||| ||||  |||||||||    
T  47877132 aatagcttatagtttatatgaaaacaatttgattttattttatcttttgttattgaaata----atacataagcaattatatgataagtcattatgctat 47877037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 14737781 - 14737826
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataac 14737826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 15687143 - 15687192
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||| ||||||||||||||||||||||||  ||||||| |||||||    
T  15687143 agcttatacgaaaacaatttaactttattttatattttgttatagaaata 15687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 30371180 - 30371107
Alignment:
Q  183 gctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||| ||||||  |||||||||| |  ||| |||||||||||||||||||| | ||||||||||| |||||||    
T  30371180 gctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatcttttgtta 30371107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34952237 - 34952184
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||||||||||||| |  |||||||||||  |||||||||||||||||||||||    
T  34952237 atagcttatgaaaacaacttacagcttattcgaaaacaatttaactttatttta 34952184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 10586419 - 10586475
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||| | ||| || | ||||||||||||||| |||||||||||||    
T  10586419 aatagcttatgaaaatggcttatagttcatatgaaaacaattttactttattttatc 10586475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 39976257 - 39976321
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||||||||||||||||||| || ||||||||   |||||| | |||||||||||||| ||||    
T  39976257 caaaatagcttatgaaaatagtgtatagcttatacagaaacaaatcaactttattttatcttttg 39976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 274
Target Start/End: Original strand, 46252679 - 46252811
Alignment:
Q  142 ttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaacttta 241  Q
    |||||||||||| || | ||||||||| | ||||||  | |||||| ||| ||||||||||   ||| |||| |||||||   |||  ||||||||||||    
T  46252679 ttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatgtggatactttaaagcttatgcaaaagaaatttaacttta 46252778  T
Q  242 ttttatcgtttgttagagaaataacgtatacat 274  Q
    ||||||| ||||||| | ||||| | |||||||    
T  46252779 ttttatcttttgttataaaaatagcctatacat 46252811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 46499924 - 46499996
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    |||||| || |||||||||| ||||||||||||| ||| ||| ||||||| | |||| |||||| ||||||||    
T  46499924 agcttaaataaaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 50319286 - 50319230
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||| || ||||||||||||| ||||||| ||||||| | ||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 4256091 - 4256173
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||| || |||||| | |||||||| ||||| |||||||||||||| |||| ||||||  ||||||| | |||||||||    
T  4256091 atagcttataaacatagtt-atagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataa 4256173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 4549858 - 4549803
Alignment:
Q  223 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| | | |||||||||    
T  4549858 tgaagacaatttaactttattttatcttttgttatagaaatagcttgtacataagc 4549803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 6976942 - 6976879
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||| | ||||||||||| ||||| ||||||| ||||||| | |||||||||||| ||||    
T  6976942 tatgaaaatagtttaactttatcttatcttttgttatagaaatatcttatacataagccattat 6976879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 33527199 - 33527286
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||| || ||| || ||||||||||||| ||| ||| ||||||||| ||||||  ||||||| | ||| ||||||| |||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataagcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 34619448 - 34619511
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||  ||||||||||||| |||||||||| ||||||| ||||||  | |||||||||||    
T  34619448 agcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataagc 34619511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 36070268 - 36070181
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||| |  ||| |||||||  ||| ||||||||||||||||||||| ||||||| | ||||| |  |||||||||| |||||    
T  36070268 cttatgaaaacaacttatagcttatccgaagacaatttaactttattttatcttttgttataaaaatagcccatacataagcgcttat 36070181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 276
Target Start/End: Original strand, 36151577 - 36151636
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||| ||||||||||| ||||||||||||| |||||||  |||||| | |||||||||    
T  36151577 cttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 275
Target Start/End: Original strand, 37842382 - 37842485
Alignment:
Q  172 tatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||| | || ||||||| |||||||||||||| |  ||| |||||||  ||| ||| ||||||||||||| ||| |||| || ||||||| | ||||    
T  37842382 tatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcgaacacagtttaactttatttcatcttttgctatagaaatagcttata 37842481  T
Q  272 cata 275  Q
    ||||    
T  37842482 cata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 45990128 - 45990187
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||||||||||||||||||| ||||||||||||| |||| || | ||||| | |||||||    
T  45990128 agcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacat 45990187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 48282167 - 48282060
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtt-tgttagagaaataacgtatacataagccc 280  Q
    |||||||||| ||| |||||||||| |||||| | |||| | ||||| | ||| ||||||||||||| || | ||| ||||||| | | ||||||||| |    
T  48282167 agctcttcaacataacttatgaaaacagtttaaaacttaaaggaaaatagtttgactttattttatctttcttttatagaaatagcttttacataagcac 48282068  T
Q  281 ttatatga 288  Q
    ||||||||    
T  48282067 ttatatga 48282060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 48748659 - 48748725
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||||||||| ||| |||| || ||||||| | ||||||||||| | |||||||    
T  48748659 tatgaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacataagcacatatatga 48748725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 871046 - 870972
Alignment:
Q  214 cagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||||| || || |||| |||||||| ||||||| | |||||   ||||||||||| |||||||||    
T  871046 cagcttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatga 870972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 1879095 - 1879145
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaat 263  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||| ||||||    
T  1879095 acagcttatatgaaaacattttgactttattttatcttctgttatagaaat 1879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 14630014 - 14630079
Alignment:
Q  193 atagcttatgaaaatagtttacagct--tatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||||| ||| ||||  |||||| ||||| | ||||||||||||||| |||||||    
T  14630014 atagcttatgaaaatagcttatagcttatatatgtaaacagtgtaactttattttatcttttgtta 14630079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 15799704 - 15799618
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgc 301  Q
    |||||||||||||||| ||| |||||||||  |  ||||||| ||||| | | |||||||||||  |||| ||| ||||||||||||    
T  15799704 agcttatatgaaaacagtttgactttatttctttttttgttaaagaaacatcatatacataagcaattatttgataagtgtttatgc 15799618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 18434505 - 18434639
Alignment:
Q  172 tatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||| | |||||| ||  ||| ||| |||||||||  || ||||||||||| | || ||| ||||||||||||| |||||||  ||||||    |||    
T  18434505 tatttttgtaagctctccaggataacttgtgaaaatagcatatagcttatatgagagcagtttgactttattttatcttttgttatggaaataggtaata 18434604  T
Q  272 cataagcccttatatgacaagtgtttatgctataa 306  Q
    || |||| ||||||||||||| | || ||||||||    
T  18434605 cagaagcacttatatgacaagcgcttgtgctataa 18434639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 321
Target Start/End: Complemental strand, 23895332 - 23895230
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaa 318  Q
    ||||||| |||| ||| | ||||||||||| ||||||| ||||||| | |||||||||   ||||||||| ||| | ||||||| ||||| || ||| ||    
T  23895332 tatatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataagggcttatgctttaagtgcttaattaa 23895233  T
Q  319 gtt 321  Q
    |||    
T  23895232 gtt 23895230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 28467356 - 28467418
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||| |  ||  |||||||||||||| ||||| ||||||||||||| |||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatcttttgtta 28467418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 308
Target Start/End: Original strand, 30259540 - 30259650
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttt 297  Q
    ||||| ||| || ||| ||||||||| ||| || ||| ||||||||||||  ||||||| ||||||| | | | ||||||| ||| ||||| |||||| |    
T  30259540 ttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgataagtgtgt 30259639  T
Q  298 atgctataagt 308  Q
    ||| |||||||    
T  30259640 atgttataagt 30259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 264
Target Start/End: Original strand, 33723431 - 33723501
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||||| |||| | || ||||||||||||||||| ||||||| |||| | || ||| |||||||    
T  33723431 tagcttatgaaaacagttcatagtttatatgaaaacaatttgactttatgttattgattcttatagaaata 33723501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 38867871 - 38867952
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttata--tgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||| ||| |||||||||| |||||| ||||||||  |||||||| ||| ||||||||| ||| |||| || |||||||    
T  38867871 tcttcaagataacttatgaaaacagtttaaagcttatatatgaaaacattttgactttatttaatcttttggtatagaaata 38867952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 277
Target Start/End: Original strand, 4700061 - 4700198
Alignment:
Q  140 atttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactt 239  Q
    |||| ||||||||||| || |||||||||   ||||||  | |||||| ||  |||| |||| |||| |||||| |||||||| | |||  |  ||||||    
T  4700061 atttttgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatacggaaatgaagtaactt 4700160  T
Q  240 tattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||| ||||||| ||||||| | | ||||||||    
T  4700161 tattttatcttttgttatagaaatagcttgtacataag 4700198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 6074474 - 6074425
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||||| ||||||||||| | ||| ||||||| |||||||    
T  6074474 agcttatatgaaaacagtttaactttatatcatcttttgttatagaaata 6074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 7028294 - 7028229
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||||  ||||||| |||||||||||||||| |||| || |||||||   |||||||||||    
T  7028294 acagcttatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataagc 7028229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 7218122 - 7218175
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||| ||||||||| |  ||| |||||||||||||||||||| |||||||||||    
T  7218122 ataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 13037836 - 13037787
Alignment:
Q  243 tttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||| ||||||| ||||||| | ||||||||||| |||||||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatgacaag 13037787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 13809988 - 13809947
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||||||||||||| |||| || |||||||||    
T  13809988 aaaacaatttaactttattttatcttttgctaaagaaataac 13809947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 19462808 - 19462865
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||| ||||||||||||||| | ||||||| ||||||||||||  ||| |||||||||    
T  19462808 ttcagaatagcttatgaaaacaatttacagtttatatgaaaactgtttgactttattt 19462865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 24915101 - 24915154
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||| || ||| ||| ||||  ||||||||||||||||||||||||    
T  24915101 agcttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatc 24915154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 29929696 - 29929753
Alignment:
Q  220 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||| |||||||| |||||||  ||||||  |||||||| |||||||||||    
T  29929696 atatgaaaacagtttaacttcattttatgttttgttgaagaaataaagtatacataag 29929753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 30815707 - 30815752
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||| | ||||||||||||||||| ||||||| |||||    
T  30815707 cttatatgaaaatagtttaactttattttatcttttgttatagaaa 30815752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 299
Target Start/End: Complemental strand, 33527388 - 33527339
Alignment:
Q  250 tttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 299  Q
    ||||||| ||||||||| ||||||||||| ||||||  ||||||||||||    
T  33527388 tttgttaaagaaataacttatacataagcgcttataatacaagtgtttat 33527339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 40357963 - 40358016
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||||||||| |||||||||||||  |||||| ||||||| | ||||||||    
T  40357963 atgaaaacaatttgactttattttatccattgttatagaaatagcttatacata 40358016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 46980182 - 46980294
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttt 297  Q
    ||||||||| | |||| | |||||||||||||| |||  |||||||||||| |||| || | ||| ||| ||| |||| || ||||||||| || ||  |    
T  46980182 ttatgaaaacaatttataacttatatgaaaacagtttgtctttattttatcttttgatataaaaacaacttatgcatatgcacttatatgataaatg-gt 46980280  T
Q  298 atgctataagtact 311  Q
    ||||||||||||||    
T  46980281 atgctataagtact 46980294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 47498905 - 47498946
Alignment:
Q  214 cagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||    
T  47498905 cagcttatacgaaaataatttaactttattttatcttttgtt 47498946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 1565570 - 1565638
Alignment:
Q  180 tgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||| |||||||| ||| ||||| || |||||  |||||  ||||||||||||||| ||||||||    
T  1565570 tgagctctccaaaatagattaagaaaacagcttacactttatacaaaaacaatttaacttcattttatc 1565638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 266
Target Start/End: Original strand, 10199405 - 10199529
Alignment:
Q  142 ttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaacttta 241  Q
    |||||||||||| || | |||||||||   ||||||  | ||||||  ||||||||||||||||| || |||  | ||||| ||||| | ||| ||||||    
T  10199405 ttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgacttta 10199504  T
Q  242 ttttatcgtttgttagagaaataac 266  Q
    ||||||| |  |||| |||||||||    
T  10199505 ttttatcttgggttatagaaataac 10199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 12519016 - 12519131
Alignment:
Q  193 atagcttatgaaaatagtttacagcttata--tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgaca 290  Q
    ||||||||||||||   |||| ||||||||  |||||||||||| ||||||||||||   |||||| |||| ||   |||||||| |  ||||||| | |    
T  12519016 atagcttatgaaaactatttatagcttatacatgaaaacaatttgactttattttatacattgttatagaagtagattatacataggtgcttatataata 12519115  T
Q  291 agtgtttatgctataa 306  Q
     |||||||||||||||    
T  12519116 ggtgtttatgctataa 12519131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 15361736 - 15361680
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||| |||||||||| || ||| |||||||||||||| ||||| |||||| ||||||    
T  15361736 aatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatc 15361680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 15784337 - 15784305
Alignment:
Q  214 cagcttatatgaaaacaatttaactttatttta 246  Q
    ||||||||| |||||||||||||||||||||||    
T  15784337 cagcttatacgaaaacaatttaactttatttta 15784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 18403191 - 18403295
Alignment:
Q  140 atttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactt 239  Q
    |||| |||||||||||| | ||||| |||   ||||||| | |||||| || ||||||| ||||||||||  || |||||||  |  |||||||||||||    
T  18403191 atttgtgacatgtttataaattgttctcaacttatttttgtaagctctccagaatagctcatgaaaatagcatatagcttattcgcgaacaatttaactt 18403290  T
Q  240 tattt 244  Q
    |||||    
T  18403291 tattt 18403295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 28788608 - 28788648
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||||||||||||||| ||| ||||||||||||| ||||||    
T  28788608 agcttatatgaaaacagtttgactttattttatcctttgtt 28788648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 40304107 - 40304187
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||| || ||| | |||||||||||||||| | | ||||||||||| ||||||| | ||||| | ||||| |||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagc 40304187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 44936651 - 44936711
Alignment:
Q  206 atagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||| ||| |||||||||||||| | ||| ||||||| ||||| ||||||| |||||||||    
T  44936651 atagattatagcttatatgaaaatagtttgactttatcttatcttttgttatagaaataac 44936711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 305
Target Start/End: Complemental strand, 45107620 - 45107533
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    |||||||||||| | ||| ||||||||||||  ||| ||| ||||||| | |||| |||||| ||||||||| |  |||||||||||||    
T  45107620 cttatatgaaaatagtttgactttattttatt-tttcttatagaaatagcttatagataagcacttatatgatagatgtttatgctata 45107533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 265
Target Start/End: Original strand, 47002922 - 47002994
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    |||||||||||||| | |||  | ||| ||| |||||||||||||||||||||||| ||| |||  |||||||    
T  47002922 atagcttatgaaaacaatttctaacttgtataaaaacaatttaactttattttatcttttattatcgaaataa 47002994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 49888789 - 49888705
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||||||| |  | | |||||||| |||||||||| |||||||||||||| |||   | ||||||| | ||||||||||    
T  49888789 atagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatctttttccaaagaaatagcttatacataag 49888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 3673840 - 3673731
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||||||| |||||| ||||||| |  ||| | |||||||||||||||||||||||||||||||  ||||||| |||||||||  |||||||||| ||    
T  3673840 agctcttcaagatagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcact 3673741  T
Q  282 tatatgacaa 291  Q
    ||||||||||    
T  3673740 tatatgacaa 3673731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 18962086 - 18962181
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| | ||||| |  |||||||||| |||| ||||    
T  18962086 atagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatga 18962181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 11513920 - 11513809
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| |  ||| |||||||||||||||||||| ||||||||||||| ||||||   | |||||| ||||||||| ||||||||||| |||    
T  11513920 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataaacccttatatgataag 11513824  T
Q  293 tgtttatgctataag 307  Q
    || ||||| ||||||    
T  11513823 tgcttatgttataag 11513809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 8017456 - 8017395
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgt 254  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  8017456 atagcttatgaaaacagtttacagcttatatgaaaataatttaactttgttttatcctttgt 8017395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 10143194 - 10143103
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||| |  ||| ||||||||| |||||| ||| |||| |||||||| ||||||| ||||||||| ||||||||||| |||||    
T  10143194 atagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 201 - 296
Target Start/End: Original strand, 11344340 - 11344435
Alignment:
Q  201 tgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    |||||| | |||| ||||| |||||||||||||| ||||| ||||||| ||||||| ||||||| | ||| ||||||| ||||||| |||||||||    
T  11344340 tgaaaacaatttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatataacaagtgtt 11344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 33267584 - 33267659
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||| |||||||||||||||  |||||||| |||||||   ||||||||||| |||||||||    
T  33267584 acagcttatatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttatatga 33267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 2416331 - 2416245
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||| |||| || ||| ||||||||| ||||||||||||||| |||||||| |||| || ||||||||| ||||||||||| ||||    
T  2416331 cttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 11393725 - 11393818
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    |||||||||||| || ||||| ||||||| |||| |||| || ||||||| | ||||||||||| |||| |||| || ||||||||||||||||    
T  11393725 agcttatatgaagacgatttagctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgctataagt 11393818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 11410386 - 11410479
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    |||||||||||| || ||||| ||||||| |||| |||| || ||||||| | ||||||||||| |||| |||| || ||||||||||||||||    
T  11410386 agcttatatgaagacgatttagctttattgtatcttttggtatagaaatagcttatacataagcacttaaatgataaatgtttatgctataagt 11410479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 17952749 - 17952850
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| |  ||  |||||||||||||| | ||| ||||||||||||| ||||||| ||||||| | |||| |||||| ||||||||| |||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataag 17952848  T
Q  293 tg 294  Q
    ||    
T  17952849 tg 17952850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 307
Target Start/End: Original strand, 42817413 - 42817538
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||||||| ||||||||||||||| ||||||   ||||||||||||||  || |||| |||||||| |||| || ||||||||| |||| || | | ||    
T  42817413 agctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatcttttggtatagaaataacatataaatcaacact 42817512  T
Q  282 tatatgacaagtgtttatgctataag 307  Q
    ||||||| ||  | ||||||||||||    
T  42817513 tatatgataaacgcttatgctataag 42817538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 278
Target Start/End: Complemental strand, 15377798 - 15377702
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||| ||| ||||||||||||||| || ||| | |||||||||||||||| ||||||||||||||| |||| || |||| || | |||| ||||||    
T  15377798 agctcctcagaatagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatcctttggtatagaagtagcttataaataagc 15377702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 321
Target Start/End: Original strand, 13630354 - 13630457
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 317  Q
    ||||||||||||| ||| ||||||| ||||| |||| |||||||||||| ||||||||||| | ||||||| || ||| || | |||||| ||| ||| |    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataagcacctatatgaaaaatgtgtacgttataagcacttaatta 13630453  T
Q  318 agtt 321  Q
    ||||    
T  13630454 agtt 13630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 18066150 - 18066099
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||||||||||||| || ||| ||||||||||||||||||||||||||||||    
T  18066150 atagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 28803576 - 28803667
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||||||||| || ||| ||||||||||||| |||||||  |||||||| |||| |||||| ||||||||| |||  ||||||| ||||    
T  28803576 agcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataagcatttatgccataa 28803667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 9556261 - 9556199
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||||||||||||| |||||| ||||| ||||||||||  || ||||||||||||||||||||    
T  9556261 atagcttatgaaaacagtttatagcttgtatgaaaacacgttgactttattttatcgtttgtt 9556199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 34339125 - 34339032
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    |||||||||| ||||||| | | ||||||||||||| || | || ||||| |   ||||||||||| ||||||||| |||||||||||||||||    
T  34339125 acagcttatacgaaaacagtctgactttattttatctttagctatagaaaaagtttatacataagcacttatatgataagtgtttatgctataa 34339032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 301
Target Start/End: Original strand, 35755554 - 35755658
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    |||||||||| |  ||| |||||| ||||||||||||| |||||||||| |  ||  ||| ||||||| | ||||||||| | |||||| ||||||||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacacttatacgacaagtgtt 35755653  T
Q  297 tatgc 301  Q
    |||||    
T  35755654 tatgc 35755658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 197 - 273
Target Start/End: Complemental strand, 39567921 - 39567845
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtataca 273  Q
    |||||||||| || ||| ||||||| |  ||||||||||||||||||||||| ||||||| ||||||| | ||||||    
T  39567921 cttatgaaaacagcttatagcttatcttgaaacaatttaactttattttatcttttgttatagaaatatcttataca 39567845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 213 - 305
Target Start/End: Complemental strand, 44600543 - 44600448
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgttt--gttagagaaataacgtatacataagcccttat-atgacaagtgtttatgctata 305  Q
    ||||||||||||||||| |||||||||||||||||| |||  | || ||||||| | ||||||||||| ||||| | || |||||| |||||||||    
T  44600543 acagcttatatgaaaactatttaactttattttatctttttggctatagaaatagcttatacataagcacttatcacgataagtgtctatgctata 44600448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 1056392 - 1056462
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||| |||||   ||||||||||| ||||||    
T  1056392 ctcttcaagatagcttatgaaaatagcttacaggttatatgaaaa-aatttgtatttattttatcttttgtt 1056462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 3611216 - 3611157
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||||||||||| | |||| || ||||||||| ||||||||||| |||||    
T  3611216 aaaacaatttaactttattttaccttttgctatagaaataacttatacataagcacttat 3611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 12464521 - 12464576
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||||||||| ||| ||| ||||  ||||||||||||||||||||||||    
T  12464521 atagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatc 12464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 656814 - 656896
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||| ||| |||||||||||||  |  |||||||||||| ||||||||||| | | ||||||||| ||||||| |||||||    
T  656814 agctctgcaagatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaata 656896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 680533 - 680483
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaattta 235  Q
    ||||||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  680533 tcttcaagatagcttatgaaaatagcttatagcttatacgaaaacaattta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Complemental strand, 5133770 - 5133683
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||| |||||| |||| |||||||||||| ||||||| ||||||| | ||||||||||  |  |||||| ||||| |||||||||||    
T  5133770 cttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatacataag--caaatatgataagtgcttatgctataa 5133683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 34339924 - 34339866
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    ||||||||||||||||| | |||||| ||||| ||||| ||||||||||||| ||||||    
T  34339924 cttatgaaaatagtttataccttatacgaaaataatttgactttattttatcttttgtt 34339866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 42592358 - 42592292
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    ||||||||||| || ||| ||||||||||||||||| ||||||| |||||||| |||| || |||||    
T  42592358 gcttatgaaaacagcttatagcttatatgaaaacaagttaacttaattttatcttttggtatagaaa 42592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 43199436 - 43199346
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||| ||||||||| |  ||| |||||||| ||| | ||||||||||||||||||| ||||||  ||||||||| |||||| |||| ||||    
T  43199436 atagtttatgaaaacaacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttatacagaagcgctta 43199346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 1493565 - 1493678
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    |||||||||| ||  || ||||||||||||||||| |  |||||||||||||  |||||| ||||| |   |||| ||||||  |||||||| ||| |||    
T  1493565 cttatgaaaacagcatatagcttatatgaaaacaactagactttattttatctattgttatagaaagagtttataaataagcaattatatgataagagtt 1493664  T
Q  297 tatgctataagtac 310  Q
    ||||| ||||||||    
T  1493665 tatgcgataagtac 1493678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 294
Target Start/End: Complemental strand, 13864681 - 13864571
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||| ||||||||| ||||||||||||  || ||||||||| |||| |  |  ||||||||||| | ||||||| ||||||| | ||||||||| | ||    
T  13864681 agctcgtcaaaatagtttatgaaaatagcatatagcttatataaaaaaa--tcgactttattttaccttttgttatagaaatagcttatacataaacact 13864584  T
Q  282 tatatgacaagtg 294  Q
    |||||||| ||||    
T  13864583 tatatgacgagtg 13864571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 16451127 - 16451082
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttaga 258  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||    
T  16451127 acagcttatatgaaaacaatttaacttcattttatcttttgctaga 16451082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 25800859 - 25800810
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaattt 234  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  25800859 tcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 37053592 - 37053515
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 294  Q
    |||||||||||||| ||| ||||||||||||  | ||||| |||||||   ||||||||||| ||||||||| |||||    
T  37053592 cttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtg 37053515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 41875701 - 41875770
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||||| || |||||||||||| |||||||| ||||| | |||||||| || |||| |||||    
T  41875701 atagcttatgaaaacagcttacagcttatacgaaaacaacttaacatcattttatctttggttaaagaaa 41875770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 324
Target Start/End: Original strand, 3235438 - 3235563
Alignment:
Q  199 tatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat--gacaagtgtt 296  Q
    |||||||| || ||| || |||||||||| || ||| |||||||||| || ||||||| | ||||| |  |||||||||| |||||||  || |||||||    
T  3235438 tatgaaaacagcttatagtttatatgaaa-cagtttgactttatttt-tcatttgttataaaaatagctaatacataagcacttatatatgataagtgtt 3235535  T
Q  297 tatgctataagtactaaatgaagttttt 324  Q
    |||||||||||| || ||| ||||||||    
T  3235536 tatgctataagtgctcaattaagttttt 3235563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 35809927 - 35809860
Alignment:
Q  220 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||||| | ||||||||||| ||||| |  |||||||| ||||||||||| |||||||||    
T  35809927 atatgaaaacaatttgattttattttatc-tttgtcatggaaataacttatacataagcacttatatga 35809860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 1647032 - 1646945
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||| || ||| ||||||||  ||||||||| ||||| ||||||||||||| || | ||||| | | ||||||||| |||||    
T  1647032 cttatgaaaacagcttatagcttataaaaaaacaattgaacttaattttatcgtttgctatacaaatagcttgtacataagcacttat 1646945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 32098384 - 32098473
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct---tatatgacaagtgtttatgctataag 307  Q
    |||||||||| ||| ||||||||||||| ||||||| ||||||| | |||| ||||||  |   ||||||| || |||||||||||||||    
T  32098384 tatgaaaacactttgactttattttatcttttgttatagaaatagcttatatataagcatttagtatatgataactgtttatgctataag 32098473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 33944620 - 33944573
Alignment:
Q  200 atgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    ||||||| | |||| |||||||||||||||||||| ||||||||||||    
T  33944620 atgaaaacaatttatagcttatatgaaaacaatttgactttattttat 33944573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 284
Target Start/End: Original strand, 34054949 - 34055040
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||| |  ||| | | |||||| ||||| |||  |||||||||||| ||||||| ||||||| | ||||||||||| |||||    
T  34054949 atagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatcttttgttatagaaatagcctatacataagcacttat 34055040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||||||||||||||| |||||| |||||| ||||||| ||||||| | |||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 3423841 - 3423899
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||| ||||| ||||||||||||| |||| || | ||||||| |||||||||    
T  3423841 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 3423899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 308
Target Start/End: Complemental strand, 4550774 - 4550684
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    |||||||||||||  || || |||||||||| ||| |||  |||| ||| ||||||||||| ||||| ||| ||| | |||||||||||||    
T  4550774 ttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataagagattatgctataagt 4550684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 9395163 - 9395097
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||| || |||| || ||||||| || ||| || |||||||||||||||||| ||||||||||||    
T  9395163 agctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatc 9395097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 22681233 - 22681295
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtt 255  Q
    |||| ||||||||| || ||| ||||||||||||||||||||  |||| ||||||| ||||||    
T  22681233 atagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatcttttgtt 22681295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 28902077 - 28902007
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    |||||||||||||||| ||||| ||||||||| | | ||||| | ||||| | ||||||||||| ||||||    
T  28902077 agcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 29629078 - 29629128
Alignment:
Q  234 taactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||| |||||    
T  29629078 taactttattttatcttttgtcacagaaataacatatacataagcacttat 29629128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 306
Target Start/End: Complemental strand, 43808578 - 43808485
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgtta-gagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    |||||||||||||||| | |||||||||||||||| ||||||||  | ||||| | ||||||||| | ||||||||| | | | |||||||||||    
T  43808578 acagcttatatgaaaatagtttaactttattttat-gtttgttataaaaaatagcttatacataaacacttatatgatacgcgcttatgctataa 43808485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 44439408 - 44439486
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||||| |||| | |||| ||||||||  |||||| ||||||||||||||||  |||||||  |||||||| ||||    
T  44439408 atagcttataaaaacaatttatagcttatacaaaaacagtttaactttattttatattttgttatggaaataacttata 44439486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 3458659 - 3458606
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||||| | ||| ||||||||||||| ||||||| | |||||||    
T  3458659 acagcttatatgaaaaaagtttgactttattttatcttttgttataaaaataac 3458606  T

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Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 17221588 - 17221641
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||||||||||||| | || | ||||||||||| |||||||| |||||||||||    
T  17221588 atagcttatgaaaacacttaatagcttatatgagaacaatttgactttatttta 17221641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 25609796 - 25609727
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||| ||||| || || ||||||||||||| ||| ||| ||||||| | ||||||||||| |||||    
T  25609796 agcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttat 25609727  T

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Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 28039382 - 28039435
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||||| | ||| || ||||||||||||||||  |||||||||||||    
T  28039382 agcttatgaaaattgcttatagtttatatgaaaacaattggactttattttatc 28039435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 286
Target Start/End: Complemental strand, 28933846 - 28933753
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    |||||||||||||| | |||| | |||| ||||||| ||||| | || |||||||| ||||||| | ||||| | ||||||| ||| |||||||    
T  28933846 atagcttatgaaaacaatttataacttaaatgaaaataatttgatttgattttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 35459910 - 35459837
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||| ||||||||||| ||||||||||||| |||| || | ||||| | |||||| || | |||||||||    
T  35459910 agcttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatga 35459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 36114594 - 36114639
Alignment:
Q  216 gcttatatgaaaacaatttaactttattttatcgtttgttagagaa 261  Q
    |||||||  |||||||||||||||||||||||| ||||||| ||||    
T  36114594 gcttatacaaaaacaatttaactttattttatcttttgttatagaa 36114639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 2400121 - 2400065
Alignment:
Q  250 tttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||| ||||| ||| ||||||||||| ||||||||| || ||||||||| ||||    
T  2400121 tttgttatagaaacaacttatacataagcacttatatgataattgtttatgccataa 2400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 8820341 - 8820405
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||| ||||| ||| |||| ||||||||| ||||||| | ||||| | ||||||||||    
T  8820341 acagcttatattaaaacgattgaactatattttatcttttgttatataaatagcttatacataag 8820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 9404547 - 9404511
Alignment:
Q  268 tatacataagcccttatatgacaagtgtttatgctat 304  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9404547 tatacataagcacttatatgataagtgtttatgctat 9404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 15866716 - 15866796
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtataca 273  Q
    ||||||||||||| | | ||| ||||||||||||||||| |  |||||||||||   ||||||| | ||||||| ||||||    
T  15866716 atagcttatgaaagtggcttatagcttatatgaaaacaagtcgactttattttacattttgttacaaaaataacttataca 15866796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 29288665 - 29288613
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgta 269  Q
    ||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||    
T  29288665 cttatatgaaaacaattcacctttattttatcttttgttgtagaaatagcgta 29288613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 277
Target Start/End: Original strand, 29316823 - 29316907
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||| ||||||| || ||| || |||| ||||||||||||||| |||||||||| | ||||| ||| ||| | || |||||||    
T  29316823 atagctgatgaaaacagcttatagattatgtgaaaacaatttaaccttattttatcttctgttaaagatatagcttagacataag 29316907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 32848930 - 32848898
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatga 225  Q
    ||||||||||||||||||||| |||||||||||    
T  32848930 atagcttatgaaaatagtttatagcttatatga 32848898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 33576675 - 33576727
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||| ||| |||||||| |||| ||||||| ||||||||| |||||||||||    
T  33576675 aaacagtttgactttattgtatcttttgttatagaaataacctatacataagc 33576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 43141902 - 43141838
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||  |||||||||||||| |  ||| |||||||||| ||||||||| |||||| ||||||    
T  43141902 ctcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatc 43141838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 29588910 - 29588788
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||||||| |||||||| ||||| | |||| ||||||||||||||||||||  | |||||||||  ||||||| ||||||| | ||||||||||| ||||    
T  29588910 ctcttcaacatagcttacgaaaacactttatagcttatatgaaaacaatttt-cattattttatattttgttatagaaatagcttatacataagcactta 29588812  T
Q  284 tatgacaagtgtttatgctataag 307  Q
    ||| | ||||||||||||||||||    
T  29588811 tataaaaagtgtttatgctataag 29588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 9202788 - 9202887
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||| ||| |||||||||| || |||  ||||||||||||||||||||||||||||||||| |||| || ||||||| | |||| |||||| |||||    
T  9202788 tcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 20982208 - 20982324
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 317  Q
    ||||||||||||   || ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |||   |||||||||||| ||| |||||    
T  20982208 ttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagcacttaatga 20982307  T
Q  318 agtttttaatgcaaaca 334  Q
    |||| || || ||||||    
T  20982308 agttgtttatccaaaca 20982324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 37063146 - 37063238
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagta 309  Q
    |||||||||||| | ||| ||||||||||||| ||||||| |||||||   |||||||||||  ||||||||||||  |||||||||||||||    
T  37063146 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataagta 37063238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8158353 - 8158409
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||    
T  8158353 cttatgaaaataatttaaagcttatatgaaaataatttaactttattttatcttttg 8158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 38819672 - 38819736
Alignment:
Q  242 ttttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||| ||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttatgccataa 38819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 39128659 - 39128547
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 294  Q
    ||||||| ||||||||||| || |||| ||| |||||||| ||||||||||||| ||||||| |||| || | ||||||||||| | ||||| | ||  |    
T  39128659 agcttataaaaatagtttatagtttatttgagaacaatttgactttattttatcttttgttatagaattagcttatacataagcacatatattaaaaaag 39128560  T
Q  295 tttatgctataag 307  Q
     ||||||||||||    
T  39128559 cttatgctataag 39128547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 14295528 - 14295457
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||| ||||| || ||| |||||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  14295528 atagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 26209461 - 26209545
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatat-gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||||||||| || ||| ||||||||| ||||||||||  |||||||||||||  |||||| ||||||||| |||||||||||    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc--ttgttatagaaataacttatacataagc 26209545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 7319449 - 7319379
Alignment:
Q  172 tatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttat 242  Q
    ||||||| | || ||| ||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  7319449 tatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaactttat 7319379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 32059642 - 32059743
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttt 297  Q
    ||||||||| || ||| |||||||||||||||| ||| ||||||||||||| || |||| | ||| | | ||||||||||| ||||||||| |||| |||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataagtattt 32059740  T
Q  298 atg 300  Q
    |||    
T  32059741 atg 32059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 32172675 - 32172561
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| || ||| |||||||||| |||||| || |||| |||||||| ||||||  |||||||   ||||||||||| ||| ||||| |||    
T  32172675 atagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataag 32172576  T
Q  293 tgtttatgctataag 307  Q
     | ||||||| ||||    
T  32172575 cgcttatgctgtaag 32172561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 33458982 - 33459068
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||  ||||||||| ||| || ||||||  |||||||| ||||||||||| || ||||||| ||||||||| |||||||||||    
T  33458982 aatagctattgaaaataggttatagtttatatataaacaattcaactttattttgtcttttgttatagaaataacttatacataagc 33459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 29117000 - 29117061
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||| ||||||||| |||||||||    
T  29117000 agcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 6738484 - 6738568
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||| ||||| |||||||||| || ||| |||  |||||| | ||||||||||  ||||||||| |||||||||||||||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtgtttatgctataa 6738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 7674670 - 7674586
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||||||| | ||||  ||||||| ||||||||||||| ||||||||||| |||| || ||||||| | |||| |||||    
T  7674670 atagcttatgaaaacattttatggcttataagaaaacaatttaaatttattttatcttttggtatagaaatagcttatatataag 7674586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 12595813 - 12595857
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||    
T  12595813 ttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 16945020 - 16945121
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||||||  |||| | |||||||||| ||| ||||| |||||||||||||||||  ||||||||| ||| ||  ||||||| | ||||||||||| ||    
T  16945020 agctcttcaggatagttaatgaaaatagcttatagcttctatgaaaacaatttaac--tattttatcttttcttgtagaaatagcttatacataagcact 16945117  T
Q  282 tata 285  Q
    ||||    
T  16945118 tata 16945121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 32408629 - 32408681
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaattt 234  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||| |||||    
T  32408629 agctcttcaggatagcttatgaaaatagtttatagcttatatgaaaataattt 32408681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 35135732 - 35135804
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    |||||||||||||| | ||| ||||||||||||| ||||||| ||||||| | ||||||||| | ||||||||    
T  35135732 agcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 12425593 - 12425538
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| |||||| || ||| |||||||| |||||||||||||||||||||||||    
T  12425593 atagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatc 12425538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 27104525 - 27104576
Alignment:
Q  256 agagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||    
T  27104525 agagaaataacttatacgtaagcacttatatgataagtgtttatgctataag 27104576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 27106010 - 27106085
Alignment:
Q  232 tttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||||||||| ||||||| |||||| || ||||| ||||| ||||||  | ||||||||||||| ||||    
T  27106010 tttaactttattttatcttttgttatagaaatgacttatacgtaagcacttatacaataagtgtttatgctgtaag 27106085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 293
Target Start/End: Complemental strand, 36539779 - 36539668
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||||||| |||| ||||| |||| |  ||| ||||||||||||||||  || ||||||||||||| |||| || | ||||| | || |||||||| ||    
T  36539779 agctcttcagaataacttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcact 36539680  T
Q  282 tatatgacaagt 293  Q
    ||||||| ||||    
T  36539679 tatatgataagt 36539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 276
Target Start/End: Original strand, 38047903 - 38047986
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||| ||  || ||  |||||||||| ||||| ||||||||||||| ||||||||||| ||| | |||||||||    
T  38047903 atagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 39105486 - 39105395
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||| || ||| |||||||| |||||||||||||||| |||| ||  || | || ||||||| | ||||||||||| |||||    
T  39105486 atagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatacataagcgcttat 39105395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 40097483 - 40097546
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| ||||||||| | ||||| ||||||||| |||||||| || |||||||||    
T  40097483 aaaacaatttaactctattttatcttctgttatagaaataacttatacatacgcacttatatga 40097546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 10363743 - 10363701
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  10363743 atgaaaacaatttaactttattttatcttttgttatagaaata 10363701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 12975380 - 12975306
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||| ||| |||||||||||| | || ||| |||||||||||||||||||| | ||||||||||  |||||||    
T  12975380 agctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttattctttgtta 12975306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 28586839 - 28586897
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||||| ||| ||||||||||||| ||||||| |||||||  ||||||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataa 28586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 35553225 - 35553287
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||||| || |||||| ||||||||||||||| |||||||||||||| ||||| |||| ||||    
T  35553225 agctctccagaatagcgtatgaaaatagtttatagcttatatgaaaagaatttgacttaattt 35553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 36639555 - 36639481
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||| |||||||||||||| ||| || | ||| |||||||||| ||| | ||||||||||| |||||||    
T  36639555 agctcttcaagatagcttatgaaaacagtctataacttgtatgaaaacattttgattttattttatcttttgtta 36639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 26516275 - 26516206
Alignment:
Q  238 tttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||| ||||||  ||||||| | ||||||||||| ||||||||| ||| | ||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataag 26516206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 465956 - 465892
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||  |||||||||||||||||||||||| ||||| | ||||||| | |||| |||||    
T  465956 acagcttatacaaaaacaatttaactttattttatcttttgtcatagaaatagcttatatataag 465892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 985633 - 985573
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||| |||||||| ||| ||||||||||||| |||||||  |||||||| ||||||||    
T  985633 agcttatgtgaaaacagtttgactttattttatcttttgttatggaaataacatatacata 985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 10391329 - 10391265
Alignment:
Q  239 ttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgcta 303  Q
    |||||||||| ||||||| | ||||| | ||||| ||||| ||||||||| ||||||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtgtttatgcta 10391265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 17756808 - 17756872
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||| ||||||||||||| | ||||| ||||| |||  |||||||||| |||||||||    
T  17756808 gaaaacaatttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatga 17756872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 18704083 - 18704178
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||||| |  ||| ||||||||| |||| |  || |||||| |||||| ||||||| ||||||||| ||||||||||  |||||||||    
T  18704083 aatagcttatgaaaacaacttatagcttatataaaaatagcttgacttta-tttatcttttgttatagaaataacttatacataagaacttatatga 18704178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 26516422 - 26516354
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaa 261  Q
    |||||||||||||| |||||| | |||||||||||  | ||| |||||||||||||  |||||||||||    
T  26516422 atagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatctattgttagagaa 26516354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 40048359 - 40048419
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||| ||| ||||||||||||||| ||||||| ||||| ||| ||||||||||| |||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 29115304 - 29115375
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||| | ||||||  ||||||| | ||||||||||| ||| ||||| || |||||||||||||||    
T  29115304 actttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataag 29115375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 34117573 - 34117675
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||| ||| |||||||||||||  |  ||| |||||||||| ||| |||   || |||||||||| ||||||| ||||||||| ||||||||||| ||    
T  34117573 agctctccaagatagcttatgaaagcaacttatagcttatatgtaaataat---accttattttatcttttgttaaagaaataacttatacataagcact 34117669  T
Q  282 tatatg 287  Q
     |||||    
T  34117670 aatatg 34117675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 42583140 - 42583089
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| | ||||||||    
T  42583140 gaaaacaatttaactttatttcatcttttgttatagaaataccttatacata 42583089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 7853647 - 7853609
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  7853647 aaacaatttaactttattttatcttttgttatagaaata 7853609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 10303794 - 10303752
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||    
T  10303794 atgaaaacaatttgactttattttatcttttgttatagaaata 10303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 14716522 - 14716632
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    |||||||||| |||||| |||||||||  |||||  | |||| |||| | || |||  || ||||| ||| ||||||||||| |||||||||||| |  |    
T  14716522 cttatgaaaacagtttatagcttatatagaaacaggtcaactgtattatttcttttactatagaaacaacttatacataagcacttatatgacaaatcct 14716621  T
Q  297 tatgctataag 307  Q
    |||||||||||    
T  14716622 tatgctataag 14716632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 282
Target Start/End: Complemental strand, 40452306 - 40452224
Alignment:
Q  200 atgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctt 282  Q
    ||||||| || ||| |||||| |  |||| ||||||||||||||||||  |||| || ||||||| | |||||||||||||||    
T  40452306 atgaaaacagcttatagcttaaaccaaaataatttaactttattttattatttgctatagaaatatcttatacataagccctt 40452224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 912719 - 912792
Alignment:
Q  216 gcttatatgaaaacaattta-actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||||  ||||||||||||  | ||||| ||||||||| ||| ||||| | |||||||||    
T  912719 gcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataaacgcttatatga 912792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 2563241 - 2563164
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaa 261  Q
    |||| ||| ||||||| ||||||||||||| ||||||||  ||||||||| |||||  ||||| | ||||||| ||||    
T  2563241 ctctccaagatagcttgtgaaaatagtttatagcttatacaaaaacaattgaacttcgttttaccttttgttatagaa 2563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 12407711 - 12407792
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||   ||| | |||| |||||||||  || ||||||||||||| ||||||| ||||||| | |||||||||    
T  12407711 agcttatgaaaatgacttataacttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 16889757 - 16889672
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||||||||| || ||| ||||| ||| |||||| ||| |||| | |||||| |||||||  |||||| | |||||||||||    
T  16889757 atagcttatgaaaacagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatacataagc 16889672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 18857450 - 18857511
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||||| || ||| || |||||  |||||||||| ||||||||||||||| |||||    
T  18857450 agcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatcgtgtgtta 18857511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 34112875 - 34112806
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||||||||||||| ||||||||| || ||| |||  || ||||||| | ||||||||||| |||||    
T  34112875 agcttatatgaaaacaacttaactttaattaatcttttactatagaaatagcttatacataagcgcttat 34112806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 34690853 - 34690812
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||    
T  34690853 actttattttatcttttgttatagaaatagcgtatacataag 34690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 35963244 - 35963155
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    |||||||||||| ||||| ||||||| ||| ||| ||| ||||||||  |||||| |||| ||||| ||| ||  | |||||||||||||    
T  35963244 tatatgaaaacagtttaattttatttgatcttttcttatagaaataatttatacacaagcacttatttgataatcgcttatgctataagt 35963155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 305
Target Start/End: Complemental strand, 39141990 - 39141880
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||||||||||  ||||| |||||||||||||  ||||| ||| ||||||||  ||||||| ||  ||||| | ||||||| | |||||||||  |     
T  39141990 atagcttatgaaaactgtttatagcttatatgaaattaatttgactatattttatgttttgttatag--ataacttgtacataatcacttatatgatgaa 39141893  T
Q  293 tgtttatgctata 305  Q
    || ||||||||||    
T  39141892 tggttatgctata 39141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 39823191 - 39823284
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa-cgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||||||||||||  | ||| ||||||||||||| ||||||| | |||||| |  |||||||||||||| ||| ||||| | ||||||| ||||    
T  39823191 agcttatatgaaagtagtttgactttattttatcttttgttatataaataatctgatacataagcccttctataacaagcgcttatgctgtaag 39823284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 4855696 - 4855636
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||| |||||||||||||||||||||  ||||||| | ||||| |  |||||||||    
T  4855696 cttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataag 4855636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 7096218 - 7096270
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||| ||| |||||    
T  7096218 actttattttatcttttgttatagaaatagcttatacataagcacttgtatga 7096270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 11835268 - 11835236
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||||||||||||| |||||||    
T  11835268 gaaaacaatttaactttattttatcttttgtta 11835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 14714910 - 14715001
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||||||||  ||||||||  |||||  ||||||| ||||||| | ||||||||| | |||||| || ||| |||||||| |||||    
T  14714910 agcttatatgaaaacagcttaacttt-gtttatgttttgttatagaaatagcttatacataatcacttatacgagaagcgtttatgccataag 14715001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 39257477 - 39257577
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagtttttaatgcaaacaa 335  Q
    ||||||||||| | ||||||| ||| ||| | ||||||||||| |||| |||| ||  ||||||||||||||  || ||| ||||| || || |||||||    
T  39257477 actttattttaccttttgttatagagatagcatatacataagcacttacatgataatagtttatgctataagcgcttaattaagttgtttatccaaacaa 39257576  T
Q  336 g 336  Q
    |    
T  39257577 g 39257577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 41957499 - 41957551
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttt 245  Q
    |||||||||||||| || ||| | |||| |||||||||||||||||| |||||    
T  41957499 atagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 7e-22; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 193 - 302
Target Start/End: Complemental strand, 38462303 - 38462194
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| |||||| ||| |||||||||||| ||| ||||||||||||| |||| || ||||||| | |||| |||| | ||||||||| |||    
T  38462303 atagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataag 38462204  T
Q  293 tgtttatgct 302  Q
    ||||||||||    
T  38462203 tgtttatgct 38462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 37689423 - 37689495
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| |||||||    
T  37689423 ctctacaaaatagcttatgaaaatagtttatagcttatatgaaaataatttaactttactttatcttttgtta 37689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 22232848 - 22232753
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||||||||| ||||  |||||||||||||| ||| ||||||||||||| ||||||| | ||||| | ||||||| |||  ||||||||    
T  22232848 atagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatga 22232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 264
Target Start/End: Original strand, 33405207 - 33405286
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||| |||||||||||||| || ||| ||||||||||||||||| |||||||||||||| | |||| || |||||||    
T  33405207 tcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaata 33405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 52619036 - 52618954
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||| ||||||| |||||| || ||| | |||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  52619036 agctcttcaagatagcttgtgaaaacagcttataacttatatgaaaacaatttaactttatttaatcatttgttttagaaata 52618954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 1395688 - 1395611
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||||| |||| | |||||||||||||| ||||| ||||||||||||| ||||||| ||||||| | ||||||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 10101548 - 10101597
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10101548 cttatatgaaaacaatttaactttattttatcttttgttatagaaataac 10101597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 10212473 - 10212522
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10212473 cttatatgaaaacaatttaactttattttatcttttgttatagaaataac 10212522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 42809303 - 42809242
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| ||||||| | |||||||    
T  42809303 acagcttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 905034 - 905113
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||| |||||||||| |||||| || ||||||||||||| ||||||| ||||||| | ||||| ||||| |||||||||    
T  905034 gtttaaagcttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatga 905113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 15304411 - 15304466
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||| || ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  15304411 gtttagagtttatatgaaaacaatttaactttattttatcttttgttatagaaata 15304466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 44374720 - 44374787
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| ||||||||||||| ||||||| ||| ||| | ||||||||||| |||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatga 44374787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 20173982 - 20174048
Alignment:
Q  239 ttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    |||||||||| ||||||| |||||||||  |||||||||| ||||||| || |||||||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagcacttatataactagtgtttatgctata 20174048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 35127408 - 35127510
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||| ||| ||||  ||||||||||||||| ||| |||   ||||||||||||||||| | |||| ||||||| ||||||| | ||||||||||| ||    
T  35127408 agctctccaagatagtgtatgaaaatagtttatagcatatgcaaaaacaatttaactttagtatatcttttgttatagaaatagcctatacataagcact 35127507  T
Q  282 tat 284  Q
    |||    
T  35127508 tat 35127510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 39971309 - 39971227
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||  |||||||||||| ||||||| | || |||| ||||||||||| ||||||||| ||||||| ||| ||||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataagtgttgatgttataag 39971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 42808981 - 42808932
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  42808981 acagcttatataaaaacaatttaactttattttatcttttgttatagaaa 42808932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 22214754 - 22214830
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 294  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||||||||  |||||||| || |||||| || |||||    
T  22214754 ttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataagtg 22214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 25447287 - 25447347
Alignment:
Q  188 tcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||| |||||||||||||| |||||| ||||||||  |||||||||||| |||||||||||    
T  25447287 tcaagatagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatc 25447347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 41028921 - 41029013
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| ||||||||  || |||||||||| || ||||||| ||||||| | ||||||||||| ||||||||| |||  |||| ||||||||    
T  41028921 agcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataag 41029013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 2128331 - 2128382
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataa 2128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 276
Target Start/End: Complemental strand, 3365427 - 3365344
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||| ||||||||  |||||| ||||||| || |||| |||||||| | ||||| ||||||| | |||||||||    
T  3365427 atagcttatgaaaacagtttacaatttatataaaaacaacttgacttaattttatcttatgttatagaaatagcatatacataa 3365344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 14145934 - 14145879
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||||||||  ||| ||| |||| |||||||||||||||||||||||||    
T  14145934 atagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatc 14145879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 247
Target Start/End: Complemental strand, 22031227 - 22031164
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    ||||||||||||||||||||||| | ||||||  ||||||||||||| |||  |||||||||||    
T  22031227 ctcttcaaaatagcttatgaaaacaatttacattttatatgaaaacagtttggctttattttat 22031164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 36189556 - 36189493
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||||||||| ||||| ||||||||| | ||||||||  | |||||||||    
T  36189556 aaaacaatttaactttattttatcttttgtaagagaaatagcttatacatactcacttatatga 36189493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 36783382 - 36783453
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| || | | || ||||||||||||||||| ||||||||||||| |||| || |||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaata 36783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 47217387 - 47217284
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||| ||||||||| |  ||| ||||||| | || ||||||| || |||||||||  ||||||||||||||| | |||| |||||  |||||    
T  47217387 tcttcaaaataggttatgaaaacaacttatagcttatgtaaagacaatttcacattattttatgttttgttagagaaatagcttatagataagtacttat 47217288  T
Q  285 atga 288  Q
    ||||    
T  47217287 atga 47217284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 3015927 - 3016016
Alignment:
Q  223 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaa 313  Q
    |||||||| ||| |||| |||||||| ||||||| ||||||||   |||||||||| ||||||| | ||||||||||| |||||| |||||    
T  3015927 tgaaaacagtttgacttcattttatc-tttgttatagaaataattaatacataagcacttatataataagtgtttatgttataagcactaa 3016016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 334
Target Start/End: Complemental strand, 23785275 - 23785134
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc--ccttatatgacaag 292  Q
    ||||| |||||| |||||| |||||||||||| ||| ||| ||||||||||||| | || |  ||||||||| ||| |||||||    |||||||| ||     
T  23785275 agcttgtgaaaacagtttatagcttatatgaatacagtttgactttattttatcttctgctgtagaaataacttatgcataagcatatttatatgataaa 23785176  T
Q  293 tgtttatgctataagtactaaatgaagtttttaatgcaaaca 334  Q
      ||||||||||||| ||| ||| ||||| || |||||||||    
T  23785175 catttatgctataagcacttaattaagttgtttatgcaaaca 23785134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 37795618 - 37795564
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    |||||||||| ||| |||||| |||||||| |||||||||||||| |||||||||    
T  37795618 atagcttatggaaacagtttatagcttatacgaaaacaatttaaccttattttat 37795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||| |||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

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Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 10357431 - 10357382
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    |||||||||||| |||||||| |||||||||| ||||||| |||||||||    
T  10357431 cttatatgaaaaaaatttaacattattttatcttttgttatagaaataac 10357382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 20170745 - 20170810
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    |||||| ||| |||||||| ||||| |||||| ||||| || |||||||||| |||||||||||||    
T  20170745 agctctacaagatagcttaggaaaacagtttatagcttttacgaaaacaattgaactttattttat 20170810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 21367869 - 21367824
Alignment:
Q  200 atgaaaatagtttacagcttatatgaaaacaatttaactttatttt 245  Q
    ||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  21367869 atgaaaacagtttacagcttatatgaaaacattttgactttatttt 21367824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 292
Target Start/End: Original strand, 24158551 - 24158649
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat-cgtttgttagagaaataacgtatacataagcccttatatgacaa 291  Q
    |||||||||||||| || |||   |||||||  ||||| ||| |||||| ||||| | ||||||| ||||||||| ||||||||||| ||||||||||||    
T  24158551 atagcttatgaaaacagcttattacttatat--aaacagtttcactttactttattcatttgttatagaaataacttatacataagcacttatatgacaa 24158648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 32095233 - 32095334
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    ||||| |||| |||||||||  | ||| || |||||  ||||||||||||||| |||||||| ||||||| ||||||||| |||| || ||  |||||||    
T  32095233 ttcaagatagattatgaaaacggcttatagtttatacaaaaacaatttaacttaattttatcttttgttatagaaataacttatatatgagtgcttatat 32095332  T
Q  287 ga 288  Q
    ||    
T  32095333 ga 32095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 34254855 - 34254928
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatat-gaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||||||||||| |||| ||||  |||||| ||| ||||||||||||| |||| || |||||||    
T  34254855 aatagcttatgaaaatagtttatagctaatataaaaaacagtttgactttattttatcatttgctacagaaata 34254928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 49586986 - 49587035
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  49586986 agcttatatgaaaacagtttgactttattttatcttttgttatagaaata 49587035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 8007765 - 8007837
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    ||||||||||| |||| ||| |||||| |||||| ||||||| ||||| | | ||||||||||||||| ||||    
T  8007765 agcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagcccttgtatg 8007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  238 tttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||||||| ||||||| ||||||||| |||| |||||| ||||||||| ||  | |||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 33307652 - 33307728
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 293  Q
    |||||||||||| ||||| ||||||||| ||  |||||||  |||||| | ||||||||||| ||||||||| ||||    
T  33307652 cttatatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgataagt 33307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Original strand, 52440702 - 52440794
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||| |||  |||||||||||| ||| ||||||| |||||||||||| | || |||||||  ||||||| | || |||| ||||||||||    
T  52440702 tcttcaagataaattatgaaaatagcttatagcttatttgaaaacaatttgatttgattttatattttgttataaaagtaacctatacataag 52440794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 21574511 - 21574366
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 293  Q
    |||||||| |||| |||| | |||||||||| ||||||||||||||||||||||| | || || | ||| |||  |||||||| | |||| |||| |||     
T  21574511 tagcttataaaaaaagtt-atagcttatatgtaaacaatttaactttattttatcttgtg-tataaaaacaactcatacataaacacttacatgagaagc 21574414  T
Q  294 gtttatgctataagtactaaatgaagtttttaatgcaaacaagaccta 341  Q
    |||||| ||||||| ||| ||| ||||  || || |||||| ||||||    
T  21574413 gtttatactataagcacttaattaagtagtttatccaaacaggaccta 21574366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 24887331 - 24887402
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| || ||  |||||||||||| ||| ||| |||||||||||||  |||||| |||||||    
T  24887331 atagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaata 24887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 27792894 - 27792799
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||| ||||||||| |  || ||||||||||||||| | ||| || |||||||||| ||||||   |||||| | ||||||||||| |||||||||    
T  27792894 atagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatga 27792799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 305
Target Start/End: Complemental strand, 32703143 - 32703048
Alignment:
Q  210 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    |||| |||||||||||||||||||| | ||||||||||| ||| | | ||||||| | ||||||||| |  |||||||| || ||  |||||||||    
T  32703143 tttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaatggatatgctata 32703048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 36646430 - 36646501
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| |  ||| | |||||||||||||||||  ||||||||||||| ||||| | |||||||    
T  36646430 atagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatcttttgtcatagaaata 36646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 45432995 - 45433058
Alignment:
Q  201 tgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||| | |||| |||| |||||||||||||||||||| |||||||| ||| ||| |||||||    
T  45432995 tgaaaacaatttatagctcatatgaaaacaatttaacttcattttatcttttcttatagaaata 45433058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 48286862 - 48286913
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||| |||||| | |||||||| |||||||||||||||||| ||||    
T  48286862 cttatgaaaacagtttataacttatatggaaacaatttaactttattctatc 48286913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 21862245 - 21862339
Alignment:
Q  215 agcttatatgaaaacaatttaactt-tattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    |||||||||||||||||||| |||| ||||||||| ||||| | ||||| | | |||||  |||| |||||| || ||  |||||||||||||||    
T  21862245 agcttatatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatacgcaagcacttataagataaacgtttatgctataagt 21862339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 23315659 - 23315593
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| | ||||||||||| ||| |  ||| ||| |||||||||||||||| |||||||||||||    
T  23315659 agctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatc 23315593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 283
Target Start/End: Original strand, 20192679 - 20192744
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||||||||||  ||| ||||||||||||| ||||||| | ||||| | ||||||||||| ||||    
T  20192679 ttatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 23816076 - 23815991
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||||||||||| || ||  |||| ||| ||| ||||||||||||||  ||||| ||| ||| ||||||||| ||||||||||    
T  23816076 caaaatagcttatgaaaacagcttctagctcata-gaatacaatttaacttta--ttatcttttattatagaaataacttatacataag 23815991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 26990730 - 26990685
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttgttatagaaata 26990685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 33965526 - 33965602
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagctt--atatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||| |||||||||||||| |  ||| |||||  ||||||||||| ||| ||||||||||| | |||||||    
T  33965526 agctcttcaagatagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttattttaccttttgtta 33965602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 37788884 - 37788800
Alignment:
Q  191 aaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||||||||| |  ||| || ||||| ||||| ||||  ||||||||||||| ||||||| | ||||||| |||||||||    
T  37788884 aaatagcttatgaaaacaacttatagattatacgaaaataattggactttattttatcttttgttata-aaataacttatacataa 37788800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 45264416 - 45264461
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaacttt 240  Q
    ||||||||||||||| ||| ||||| || |||||||||||||||||    
T  45264416 agcttatgaaaatagcttatagcttgtaagaaaacaatttaacttt 45264461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 49772747 - 49772828
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    ||||||||||  ||||||||||||  ||| ||| | ||||| | ||||||||| | ||||||||| |||||| |||||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgataagtgtctatgctata 49772828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 1217848 - 1217900
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttt 245  Q
    |||||||||||||| || ||| | |||| |||||||||||||||||| |||||    
T  1217848 atagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 23952159 - 23952227
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    ||||||||| || ||||||||||||  |||| | ||| |||| |||||||| ||||||| |||||||||    
T  23952159 ttatgaaaacagcttacagcttatacaaaaatactttgacttaattttatcttttgttatagaaataac 23952227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 273
Target Start/End: Original strand, 24235731 - 24235811
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtataca 273  Q
    |||||||||||||| |  ||| |||||||||  ||| | ||| ||||||| ||||| ||||||| ||||||||| ||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 33306776 - 33306812
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaattt 234  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  33306776 ttatgaaaatagcttatagcttatatgaaaacaattt 33306812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 40122828 - 40122884
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||| ||| ||||||||||||| |||||||  |||||| | ||||||||||    
T  40122828 tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 51455852 - 51455939
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| |||||||| ||||||||||||| ||||||| | ||||||  | ||||||| | |  |||| | ||||||||||||||||||    
T  51455852 tatatgacaacaatttcactttattttatcttttgttata-aaataatttttacataaacaccaatatcataagtgtttatgctataag 51455939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 31884616 - 31884501
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| | |||| ||||||||||||||||||| || || |||||||  ||||||| ||||||||| |||||||| || ||| ||||| |||    
T  31884616 atagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataag 31884517  T
Q  293 tgtttatgctataagt 308  Q
     | |||||||||||||    
T  31884516 cgcttatgctataagt 31884501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 787144 - 787269
Alignment:
Q  183 gctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctt 282  Q
    ||||||||| ||| |||||||||| |||||| ||||||||||| |||||||| ||||||||||||| | |||||  |||| | | || |||||||| |||    
T  787144 gctcttcaagataacttatgaaaacagtttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcactt 787243  T
Q  283 atatgacaagtgtttatgctataagt 308  Q
    | |||| ||   ||||||||||||||    
T  787244 agatgataaacatttatgctataagt 787269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 339
Target Start/End: Complemental strand, 4558820 - 4558674
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||| ||| || ||| ||| |||||||||| ||||||||||||||||||| ||| ||| ||||||| | ||||||||| | |||| || | ||     
T  4558820 atagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacacttacataataaa 4558721  T
Q  293 tgtttatgctataagtactaaatgaagtttttaatgcaaacaagacc 339  Q
     ||||||||||||||  |  ||| ||||| || || |||||||||||    
T  4558720 cgtttatgctataagcgcgtaattaagttgtttatccaaacaagacc 4558674  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 28769378 - 28769500
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||| |||||||||||||||||| || ||| |||||||| ||||| | ||| |||| ||||||| |||||||| || |||| | |||||||||||  |||    
T  28769378 ctctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttataggaatagcttatacataagcattta 28769477  T
Q  284 tatgacaagtgtttatgctataa 306  Q
    ||||| |||   |||||||||||    
T  28769478 tatgataagcacttatgctataa 28769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 302
Target Start/End: Original strand, 37444485 - 37444573
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgtttatgct 302  Q
    |||||||| |||||||||||||||||| |||||| ||||||| || |||| | ||||||||||| ||||| |||| ||||| |||||||    
T  37444485 agcttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatcatgataagtgcttatgct 37444573  T

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Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 285
Target Start/End: Complemental strand, 38874672 - 38874576
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    |||||||||||||||||| || ||| |||||||||||||| ||||| |||  |||||||| || |||| ||||| ||| ||||||||| | ||||||    
T  38874672 caaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaacacttata 38874576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 1112853 - 1112790
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||| ||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||||    
T  1112853 agcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagc 1112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 307
Target Start/End: Complemental strand, 34563229 - 34563158
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||||| ||||| | ||||||||| |||| |||||| ||||||||| || |||||||||||||||    
T  34563229 actttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataag 34563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 29699252 - 29699162
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||| |||| |||| ||| ||||||||||||| ||||||| ||||||||| | |||||||||  |||||||| || | |||||||||||||    
T  29699252 cttagatgacaacattttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataag 29699162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 302
Target Start/End: Complemental strand, 7026729 - 7026644
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgct 302  Q
    |||||||||||||||||| ||||||||||||| ||||||| |  | || | ||| ||||||| ||||||||| || ||||||||||    
T  7026729 cttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataaatgtttatgct 7026644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 12361215 - 12361130
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||| |||||||||| || ||| |||||||||||||||||||| |||| |||||||| ||  ||| ||||||||| |||| |||||    
T  12361215 aataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 42237492 - 42237533
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  42237492 agcttatatgaaaacaatttaactttattttatcttttgtta 42237533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 42597420 - 42597339
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||| |  ||| |||||  ||||||||||||| ||||||||||||| ||||||| ||||||| | ||||||||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 7514604 - 7514516
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||||||||||| || ||  ||||||||||||||||||| ||| ||||||||   |||| || ||||||| | ||||||||||    
T  7514604 caaaatagcttatgaaaacagcttgtagcttatatgaaaacaattgaacattattttagtttttgctatagaaatagcttatacataag 7514516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 340
Target Start/End: Original strand, 11119090 - 11119194
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagtttttaatgcaaacaa 335  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||  |||||||| | ||  |||||||||||  ||| ||| ||||| || || |||||||    
T  11119090 actttattttatcttttgttatagaaatatcgtatacataagcgattatatgatatgtagttatgctataaacacttaatcaagttgtttatccaaacaa 11119189  T
Q  336 gacct 340  Q
     ||||    
T  11119190 aacct 11119194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 3936870 - 3936787
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||| ||||| || ||| |||||||| ||| |||||||| |||||||||||| ||||||| |||||||   ||||||||||    
T  3936870 tagcttacgaaaacagcttatagcttataggaagacaatttagctttattttatcctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 12224926 - 12225037
Alignment:
Q  172 tatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||| |||||||||||  || |||||||||| ||| ||| | |  ||||||||| | ||| ||||||||||||| |||||   ||||||||| ||||    
T  12224926 tatttttatgagctcttcaggatggcttatgaaagtagcttataccccatatgaaaatagtttgactttattttatcttttgtcttagaaataacttata 12225025  T
Q  272 cataagccctta 283  Q
    ||||||| ||||    
T  12225026 cataagctctta 12225037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 14482192 - 14482129
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||| ||||||||||||| ||||||| |||||||   ||||||||||| |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatga 14482129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 28784843 - 28784898
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||||||||| ||||| || |||| |||||||||| |||||||||||||    
T  28784843 atagcttatgaaaatagcttacaactgatatcaaaacaatttgactttattttatc 28784898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 35374425 - 35374476
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||  || ||| ||||||||||||||||||||||||||||||||||    
T  35374425 cttatgaaatcagattatagcttatatgaaaacaatttaactttattttatc 35374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 35869860 - 35869745
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaa 291  Q
    ||||||||||||||| |  ||| ||||||||||||||   ||| | ||||||||||  ||||||  ||||||  | ||||||||||  ||||||||| ||    
T  35869860 aatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataa 35869761  T
Q  292 gtgtttatgctataag 307  Q
    ||| ||||||||||||    
T  35869760 gtgcttatgctataag 35869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 40280281 - 40280348
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||| |||| ||| || |||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatga 40280348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 8909067 - 8909009
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||  ||||| |||||||||||||||||||||||| |||| |||| |||||||    
T  8909067 ttatgaaaactgtttatagcttatatgaaaacaatttaactatattatatcttttgtta 8909009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 287
Target Start/End: Original strand, 11188203 - 11188297
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    ||||||||| ||||||||||| | || |||| |||| | |||   ||||||||||| ||||||| ||||| ||| ||||||||||| ||||||||    
T  11188203 atagcttatcaaaatagtttataactaatataaaaatagtttggttttattttatcttttgttatagaaacaacttatacataagcacttatatg 11188297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 12972870 - 12972764
Alignment:
Q  201 tgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatg 300  Q
    ||||||||  ||| |||||| |||||| || ||||| ||||||| ||| | |||||  |||||| | ||||||||||| ||||||||| || || |||||    
T  12972870 tgaaaataacttatagcttacatgaaaccagtttaattttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaatgcttatg 12972771  T
Q  301 ctataag 307  Q
    |||||||    
T  12972770 ctataag 12972764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 13652248 - 13652142
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||| || |||||||||| |||| | |||| | |||||||||||||||||| |||| |||  ||| |||| || ||||||| | ||||||||||| ||    
T  13652248 agctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcact 13652149  T
Q  282 tatatga 288  Q
    || ||||    
T  13652148 tagatga 13652142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 13710891 - 13710785
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    |||||| || |||||||||| |||| | |||| | |||||||||||||||||| |||| |||  ||| |||| || ||||||| | ||||||||||| ||    
T  13710891 agctctccagaatagcttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcact 13710792  T
Q  282 tatatga 288  Q
    || ||||    
T  13710791 tagatga 13710785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 26215493 - 26215427
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||| ||||| | ||||||||||||||||| ||||||| ||||||| | ||||||||||| |||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 27049391 - 27049318
Alignment:
Q  191 aaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    |||||||||||||||| |||||| |||||||| ||||| |||| ||||||| |||||| |||| || ||||||||    
T  27049391 aaatagcttatgaaaaaagtttatagcttatacgaaaataattgaacttta-tttatcttttgctatagaaataa 27049318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 1470904 - 1470985
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||| ||||||||| || ||| |||||||||||||  ||||| ||||||||||||| ||| ||| ||||||| | |||||||    
T  1470904 ataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 7646226 - 7646145
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||||||||| | |||||| || |||||  |||||||||||||||||||||| | ||| ||| ||||||| | |||||||||    
T  7646226 agcttatgaagacagtttatagattatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 8536123 - 8536237
Alignment:
Q  219 tatatgaaaacaatttaacttta-ttttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatga 317  Q
    |||||||||||||||| |||| | ||||||  ||||||| ||||||| | ||||||||||| |||||||||||||  || ||| |||||| ||| ||| |    
T  8536123 tatatgaaaacaatttgacttcacttttat--tttgttatagaaatagcttatacataagcacttatatgacaagcattcatggtataagcactcaatta 8536220  T
Q  318 agtttttaatgcaaaca 334  Q
    |||| || || ||||||    
T  8536221 agttgtttatccaaaca 8536237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 11813142 - 11813263
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||||| || |||||||||||||| || ||| |  ||||||| ||||| |||   ||||||||||  ||  ||||||||||| | | ||||||||| ||    
T  11813142 agctcttgaagatagcttatgaaaacagattataaattatatggaaacagttttcttttattttatatttgtttagagaaatatcttgtacataagcact 11813241  T
Q  282 tatatgacaagtgtttatgcta 303  Q
    ||||||| ||| ||||||||||    
T  11813242 tatatgataagcgtttatgcta 11813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 14280471 - 14280540
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||||||||||| || |||||||| |||| || |||||||   ||||||||||| |||||    
T  14280471 agcttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataagcgcttat 14280540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 32976407 - 32976358
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    ||||| |||||||||||||||||| ||||||| ||||||| |||||||||    
T  32976407 aaaactatttaactttattttatcttttgttatagaaatagcgtatacat 32976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 34770914 - 34770853
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgt 254  Q
    |||||||||||||| |  ||| |||||| ||||||||||||| ||||||||||||| |||||    
T  34770914 atagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatcttttgt 34770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 778408 - 778356
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||||| || ||| |||| | |||||||||||||||||||||||||||    
T  778408 gcttatgaaaacagcttatagctaaaatgaaaacaatttaactttattttatc 778356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 284
Target Start/End: Complemental strand, 21653072 - 21653012
Alignment:
Q  224 gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||| |||||||||||||||||||| ||||||| | ||||| | ||||||||||| |||||    
T  21653072 gaaatcaatttaactttattttatcttttgttacataaatagcctatacataagcgcttat 21653012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 306
Target Start/End: Original strand, 29056028 - 29056151
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccct 281  Q
    ||||||| | ||||| ||||||||||||||   | ||||||||||||||| || ||||||||||||| |||| |  |||| || | ||||||||| | ||    
T  29056028 agctcttgagaataggttatgaaaatagttactaacttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacataaacact 29056127  T
Q  282 tatatgacaagtgtttatgctataa 306  Q
    | | |||||||  ||||||||||||    
T  29056128 tgtttgacaag-ctttatgctataa 29056151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 44617837 - 44617950
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||| | |||||||| || | |||||||||||||| | |||||  |||||||  || |||| ||||||| | ||||||||| |  |||||| |||||    
T  44617837 atagcttctaaaaatagtctatatcttatatgaaaacagtctaact--attttatttttagttatagaaatagcttatacataaactgttatataacaag 44617934  T
Q  293 tgtttatgctataagt 308  Q
    |||||| |||||||||    
T  44617935 tgtttaagctataagt 44617950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 6509351 - 6509406
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||| || ||| ||||||||| || ||||||| |||||||||||||    
T  6509351 atagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatc 6509406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 10114511 - 10114421
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||| ||||||| || ||| ||||||||  ||||||||| ||||| |||||||| |||| || ||||||| | ||||||||||| |||||    
T  10114511 atagctaatgaaaacagcttatagcttataccaaaacaattcaactt-attttatcttttgctatagaaatagcttatacataagcacttat 10114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 16210956 - 16211015
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    |||||||||||||||||| ||||||||||||||| |||  || ||||||| | |||||||    
T  16210956 agcttatatgaaaacaatgtaactttattttatcatttactatagaaatagcttatacat 16211015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 27119984 - 27120027
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||    
T  27119984 tatgaaaacagtttaactttatgttatcgtttgttatagaaata 27120027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 37152970 - 37153029
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||||||||||||  ||||||| |||||||   ||||||||||| |||||    
T  37152970 aaaacaatttaactttattttatactttgttatagaaatatattatacataagcgcttat 37153029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 44168556 - 44168517
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  44168556 cttatatgaaaacaaattaactttattttatcttttgtta 44168517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 30627983 - 30628045
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||| | ||||||||||| ||||||| ||||||| | |||||| | ||||||||||||    
T  30627983 aaacaattttattttattttatcttttgttacagaaatagcttatacaaatgcccttatatga 30628045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 298
Target Start/End: Complemental strand, 40356850 - 40356788
Alignment:
Q  236 actttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttta 298  Q
    ||||||||||||| ||| ||| | ||||| | |||| |||||| |||||||||||||||||||    
T  40356850 actttattttatcttttattatataaatagcttatagataagcacttatatgacaagtgttta 40356788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 7918810 - 7918875
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    |||||| ||| |||||||||||||| |  ||| |||||| | ||||| ||||||||||||||||||    
T  7918810 agctctacaagatagcttatgaaaacaacttatagcttacaagaaaaaaatttaactttattttat 7918875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 26716518 - 26716596
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctata 305  Q
    |||| ||||| ||||||||| |||  |||||| |||| || | ||||||||||| ||||||| | ||||||||||||||||    
T  26716518 aaaataatttgactttatttaatc--ttgttatagaagtagcttatacataagcacttatataataagtgtttatgctata 26716596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 29262940 - 29262977
Alignment:
Q  211 ttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  29262940 ttacagcttatatgaaaataatttgactttattttatc 29262977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 35453695 - 35453784
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    |||||||||||  | ||||||||||||||||| ||||||  ||||| |   |||| |||||  ||||||||||||| | |||||||||||    
T  35453695 cttatatgaaactagtttaactttattttatcttttgttgtagaaacagattatatataagtacttatatgacaagcgcttatgctataa 35453784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 41620365 - 41620434
Alignment:
Q  219 tatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||| | ||||| ||||||||||||| ||||||| | ||||||| |||| |||||| ||| |||||    
T  41620365 tatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatga 41620434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 773344 - 773296
Alignment:
Q  200 atgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| || ||| |||| | |||||||||||||||||||||||||||    
T  773344 atgaaaacagcttatagctaaaatgaaaacaatttaactttattttatc 773296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 787838 - 787790
Alignment:
Q  200 atgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| || ||| |||| | |||||||||||||||||||||||||||    
T  787838 atgaaaacagcttatagctaaaatgaaaacaatttaactttattttatc 787790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 3537101 - 3537149
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaat 263  Q
    |||||||| ||||||||||| ||||||||||||| |||| || ||||||    
T  3537101 agcttatacgaaaacaatttgactttattttatcttttgctatagaaat 3537149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 308
Target Start/End: Complemental strand, 8062546 - 8062430
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaac-tttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaa 291  Q
    ||||||||||| || |  ||| |||||||||||||||||||| || ||| ||||||| || ||||  |||||| | |||| ||||   ||||||||| ||    
T  8062546 atagcttatgagaacatcttatagcttatatgaaaacaatttgactttttttttatcattggttattgaaatagcttatagataaatgcttatatgataa 8062447  T
Q  292 gtgtttatgctataagt 308  Q
     || |||||||||||||    
T  8062446 atgcttatgctataagt 8062430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 29342307 - 29342259
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaacttta 241  Q
    |||||||||||||||| |||  | |||||||||||| ||||||||||||    
T  29342307 atagcttatgaaaataatttgtaacttatatgaaaataatttaacttta 29342259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 30043784 - 30043840
Alignment:
Q  183 gctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactt 239  Q
    ||||||||  |||||||||||||| || ||| ||| ||||||||| |||||||||||    
T  30043784 gctcttcagtatagcttatgaaaacagcttatagcatatatgaaagcaatttaactt 30043840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 33209267 - 33209323
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||| ||||||| ||| || ||||||||||||| ||  |||||||||||||    
T  33209267 aatagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatc 33209323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 35298525 - 35298621
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatat-gaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| |  ||| || |||||| ||||||  |||  |||||||||||| |||||||  |||||| | ||||||||||| |||||||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcacttatatga 35298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 297
Target Start/End: Original strand, 41475133 - 41475213
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtgttt 297  Q
    ||||| ||||||||||||||| ||||||||| |||| || | || || | ||||||||||  ||||| |||||||||||||    
T  41475133 ttatacgaaaacaatttaactgtattttatcttttgctataaaattagcttatacataagtgcttatcatgacaagtgttt 41475213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 42215119 - 42215182
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||||| ||| |||||||||||||||| |||| || | ||| ||||||||||| |||||||||||    
T  42215119 agctctccaagatagcttatgaaaata-tttatagatgatacgaaaacaatttgactttatttta 42215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 27598 - 27484
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||| ||||||||| |  ||| || ||||||||||||||||| ||||||||||||| | ||||| ||||||||| ||||||||||| |||| |||| |||    
T  27598 atagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataag 27499  T
Q  293 tgtttatgctataag 307  Q
     | ||||||||||||    
T  27498 agcttatgctataag 27484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 277
Target Start/End: Original strand, 21346 - 21410
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    |||||||||| ||||||||||||||||||||||||| |||  || | ||||| | ||||||||||    
T  21346 acagcttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataag 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 246
Target Start/End: Complemental strand, 58939 - 58906
Alignment:
Q  213 acagcttatatgaaaacaatttaactttatttta 246  Q
    |||||||||| |||||||||||||||||||||||    
T  58939 acagcttatacgaaaacaatttaactttatttta 58906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 8349736 - 8349826
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||   |||||| || | ||||||||| ||||| ||||||||||||    
T  8349736 cttatataaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtggttatgctataag 8349826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 29274276 - 29274362
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||| |||||||||| |||||| |||||||||||||||||||| ||||||||||||| |||| || ||||||| | |||||||||||    
T  29274276 aatatcttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagc 29274362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 9093606 - 9093695
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||| || ||| |||||||| ||||||||||||||||||||||||| |||| || ||||||| | ||| ||||||| |||||    
T  9093606 agcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttat 9093695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 1403018 - 1402947
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| | |||| |||||||||||||| | ||||||||||||||||| ||||||| |||||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaata 1402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 4006736 - 4006645
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||| |  ||| ||||||||| |||||||||| ||||||||||||| ||||||| ||||||| | ||| ||||||| |||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 7714025 - 7713899
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaa 314  Q
    |||||||||||||||||||| ||||||||||||| |||||||   || ||   ||||||||||| ||||||||| | ||| |||||||||||| ||  ||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgataggtggttatgctataagcacgtaa 7713926  T
Q  315 tgaagtttttaatgcaaacaagaccta 341  Q
    | ||||| || || |||||||| ||||    
T  7713925 ttaagttctttatccaaacaaggccta 7713899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 303
Target Start/End: Complemental strand, 22742384 - 22742278
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    ||||| ||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||| | ||||| | |||| |||||  |||||| || ||| | |    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataagaacttatacgataagcgct 22742285  T
Q  297 tatgcta 303  Q
    |||||||    
T  22742284 tatgcta 22742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 5550148 - 5550040
Alignment:
Q  199 tatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttta 298  Q
    |||||||| || ||| |||||||||||||||||||| ||||||| |||||  || |||  ||||||   ||||||||||| |||||||||| || | |||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgactttatgttatctcttattatcgaaatactatatacataagcacttatatgaccagcgctta 5550049  T
Q  299 tgctataag 307  Q
    |||||||||    
T  5550048 tgctataag 5550040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 307
Target Start/End: Complemental strand, 2206621 - 2206498
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    |||| ||| |||||||||| ||| |||| | ||||||||| |||||||||  ||||||||||||| ||||||| | ||||||| |||||| ||   ||||    
T  2206621 ctctccaagatagcttatgtaaacagttcatagcttatataaaaacaattatactttattttatcttttgttataaaaataacttatacagaaatgctta 2206522  T
Q  284 tatgacaagtgtttatgctataag 307  Q
    || || ||| | ||||||||||||    
T  2206521 tacgataagagcttatgctataag 2206498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 6654605 - 6654522
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata-tgacaagtgtttatgctataag 307  Q
    |||||||||| |||| |||||||  ||||||| ||||||||| |||||||||||||||||| ||| ||| ||| ||||||||||    
T  6654605 aaaacaatttgacttaattttattatttgttatagaaataacttatacataagcccttatattgataagcgttaatgctataag 6654522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 7351678 - 7351769
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    |||||||||||||||| |||||||||||||||| |||| ||| | |||||   |||||||||||  |||||||| ||| | |||||||||||    
T  7351678 agcttatatgaaaacagtttaactttattttatagtttattatataaatagtttatacataagcatttatatgataagagcttatgctataa 7351769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 11340664 - 11340767
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||| ||||||||||||||||  |  ||| ||| |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||    
T  11340664 ctcttaaaaatagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcactta 11340763  T
Q  284 tatg 287  Q
    ||||    
T  11340764 tatg 11340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 319
Target Start/End: Complemental strand, 4248944 - 4248854
Alignment:
Q  229 caatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaag 319  Q
    |||||| ||||||||||||| |||||||  |||||| | |||| |||||| ||||||||||||| | |||||||| |||| || |||||||    
T  4248944 caatttgactttattttatcttttgttattgaaatagcttatatataagcacttatatgacaagcgcttatgctagaagtgctcaatgaag 4248854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 24836272 - 24836330
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||    
T  24836272 ttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 9559584 - 9559680
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||| ||||||| |||||| |||||  || || || ||||||||||||| ||||||||||| |||| || ||||||||| ||||||||||| |||||    
T  9559584 ttcaagatagctt-tgaaaacagtttgtagtttctacgaaaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgcttat 9559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 32976000 - 32975887
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    |||||||||||||| |  |||  |||| |||  ||||| ||| ||||||||||||  ||||||| ||||||||| ||||||||| | ||||||||| |||    
T  32976000 atagcttatgaaaacaacttattgcttctattgaaacagtttgactttattttatattttgttacagaaataacttatacataaacacttatatgagaag 32975901  T
Q  293 tgtttatgctataa 306  Q
     | |||||||||||    
T  32975900 cgcttatgctataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 2514722 - 2514610
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtg 294  Q
    ||||||||||||||  ||| |||| |||| |||  | ||| ||||||||||||| ||| ||| ||||||| | ||||||||||| |||| |||| |||      
T  2514722 agcttatgaaaataacttatagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataagca 2514623  T
Q  295 tttatgctataag 307  Q
    |||||||||||||    
T  2514622 tttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 285
Target Start/End: Original strand, 20671913 - 20672005
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    |||| ||||||||| | |||| |||||||| ||||||||||| ||||||||||||| |||| |  ||||||| | ||||||||| | ||||||    
T  20671913 atagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcacttata 20672005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 33068610 - 33068722
Alignment:
Q  195 agcttatgaaaa-tagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 293  Q
    |||||||||||| ||| ||| | ||||| |||||||| ||| |  |||||||||| ||||||| ||||||||| |||||||||||  |||| ||| |||     
T  33068610 agcttatgaaaaatagcttatatcttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatacataagcatttatttgataagc 33068709  T
Q  294 gtttatgctataa 306  Q
    | |||||||||||    
T  33068710 gcttatgctataa 33068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 281896 - 281959
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||||| | || ||| ||||||||||||||||| || ||||||||||||| |||||||    
T  281896 atagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgtta 281959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 507220 - 507157
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||  |||||||| ||||||||||||||| ||||||| ||||||||  |||||||||||    
T  507220 agcttatacaaaaacaatctaactttattttatcttttgttatagaaataatttatacataagc 507157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 10016567 - 10016472
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| || |||  |||||||||| |||| ||||| ||||||||||| |||| |  ||||||| | ||||||||||  |||||||||    
T  10016567 atagcttatgaaaacagcttatggcttatatgagaacagtttaaatttattttatcttttggtttagaaatagcttatacataaggacttatatga 10016472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 32386167 - 32386242
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||||| |||||| ||| ||||||||||||| ||| | || |||||| | ||||||||||| |||||||||    
T  32386167 acagcttatataaaaacagttttactttattttatcttttctaagtgaaatagcttatacataagcacttatatga 32386242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 32386635 - 32386706
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||| || |||||||||| ||| |||| ||||||   ||||||||||| |||||||||    
T  32386635 cttatatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatga 32386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 769160 - 769090
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||||| |||||| ||||||||  |||| || |||||||||||||| | ||||||| |||||||    
T  769160 tagcttatgaaaacagtttatagcttatacaaaaaaaaattaactttattttagcttttgttatagaaata 769090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 9732469 - 9732384
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||||| |||| |||||||| |||  || ||||||| | ||| ||||||| ||||||||  || |||||||||||||||    
T  9732469 atgaaaacaatttgacttaattttatcctttaatatagaaatagcttatgcataagcacttatatggtaaatgtttatgctataag 9732384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 29940802 - 29940749
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||| |||||||||| || ||||||||||||| ||||||| |||||    
T  29940802 gtttacagcttaaatgaaaacaaattgactttattttatcttttgttatagaaa 29940749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 1497976 - 1497888
Alignment:
Q  220 atatgaaaacaatttaactttattttatcgtttg-ttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||| ||| ||||||||||| | |||| ||| | ||||| | || |||||||| |||| |||| ||||||||||||||||||    
T  1497976 atatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataagtgtttatgctataag 1497888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 24476628 - 24476540
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||||| ||||  | |||  ||||||||||||| |||||||||  |||||||| |||| || ||||||| | ||||||||||    
T  24476628 caaaatagcttatcaaaactgcttatcgcttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataag 24476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 28088257 - 28088325
Alignment:
Q  180 tgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||| ||  |||||||||||||| |||||| |||||||||||||||||| |   |||||||||||    
T  28088257 tgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaatctgcatttattttatc 28088325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 33259836 - 33259744
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    ||||||||||||||| ||| ||| |||| ||||||| | | |||| | |||||| ||||||| | ||||| | ||||||||||| ||||||||    
T  33259836 agcttatgaaaatagcttatagcatataggaaaacagtatgacttcaatttatcttttgttataaaaatagcttatacataagcacttatatg 33259744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 33736868 - 33736776
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||| |||||| ||| |||||| ||| | || ||| |||  |||||||||||||||||||  | ||||| ||||||||| ||||||||||    
T  33736868 tcttcaagatagctaatgtaaatagcttataactgatacgaaggcaatttaactttattttatgttatgttatagaaataacttatacataag 33736776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 3217262 - 3217333
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||| ||||| ||||||||||||| | | ||| | ||||| | ||||||||||| |||||||||    
T  3217262 cttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatga 3217333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 253
Target Start/End: Original strand, 3785737 - 3785808
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||| || |||||||||  |||| || ||| |||||||| ||||||| ||||||||||||||||| ||||    
T  3785737 agctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatcttttg 3785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 10728626 - 10728575
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 272  Q
    |||||||||||||||||||||||||||| |||| |  ||||||||| |||||    
T  10728626 tatgaaaacaatttaactttattttatcttttgctttagaaataacttatac 10728575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 10749300 - 10749347
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||| ||||||||||||||||||| ||| ||| |||||||    
T  10749300 cttatatgaaaataatttaactttattttatcttttattatagaaata 10749347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 21959734 - 21959655
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||| |||||||||| |||||| || ||||||||||||| |||||||  |||||| | ||||| ||||| ||| |||||    
T  21959734 gtttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatga 21959655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 25426192 - 25426137
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||||| ||||||| ||| |||||| |||||| |||||| |||||||||||||    
T  25426192 atagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatc 25426137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 27595633 - 27595684
Alignment:
Q  211 ttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||||||||| ||||| ||||||||||||| ||| ||| |||||    
T  27595633 ttacagcttatatgaaaataatttgactttattttatcttttattatagaaa 27595684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 248
Target Start/End: Original strand, 31671122 - 31671177
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||| ||| ||||| || ||| |||||||||||||||||||||||||| |||||||    
T  31671122 atagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgttttatc 31671177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 3155194 - 3155084
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    ||||||||||||| ||| || ||||||| ||||| ||| ||||| ||||||| ||||| | ||| ||| | ||||||||| |  |||||||| ||  | |    
T  3155194 cttatgaaaatagcttataggttatatggaaacagtttgactttgttttatcttttgtaaaagagatagcttatacataaccatttatatgataaacgct 3155095  T
Q  297 tatgctataag 307  Q
    |||||||||||    
T  3155094 tatgctataag 3155084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 8420270 - 8420340
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||| || ||| ||| ||||||||||||| ||| ||| ||||||||| | ||||||||| |||||||||    
T  8420270 ttatataaacacagtttgactttattttatcatttattaaagaaataacttgtacataagcacttatatga 8420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 9027575 - 9027485
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| |||||| ||| ||||||||||||| | | ||  ||||||| | |||| |||||| ||||||| | ||||||| ||||||||||    
T  9027575 cttatattaaaacagtttgactttattttatcttctattgtagaaatagcttatagataagcacttatataataagtgttcatgctataag 9027485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 30537019 - 30537065
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  30537019 ttatatgaaaacaaattaattttattttatcttttgttatagaaata 30537065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 31668781 - 31668847
Alignment:
Q  241 attttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||||||  ||||||| ||||||| | ||||||||||| ||||||||| || || ||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatgataattgcttatgctataag 31668847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 33787782 - 33787864
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||| ||| ||| |||||||||| || ||| | ||||||||||| |||||| ||||| ||||||  ||||||| |||||||    
T  33787782 agctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaata 33787864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 256
Target Start/End: Complemental strand, 2735097 - 2735028
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||| || ||||||||||| || ||| || |||||  |||| ||||||||||||||||||| |||||||    
T  2735097 ttcaagattgcttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttttgtta 2735028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 4325378 - 4325451
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| | |||  || ||||||||| ||| ||| ||||||||| || |||||||| |||||||||    
T  4325378 agcttatatgaaaatagtttgtctctattttatcatttattatagaaataacttagacataagcacttatatga 4325451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 7485118 - 7485167
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||||||||||| |  ||| |||||||||||||| |||||||||||||||    
T  7485118 agcttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 10452430 - 10452503
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||| | ||| | ||||||||||  ||||||| ||||||| | ||||||||||| || ||||||    
T  10452430 agcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatga 10452503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 27615339 - 27615376
Alignment:
Q  211 ttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  27615339 ttacagcttatatgaaaagaatttgactttattttatc 27615376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 27693505 - 27693542
Alignment:
Q  211 ttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  27693505 ttacagcttatatgaaaataatttgactttattttatc 27693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 28621180 - 28621221
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||  |||||||||||||||||||||||| |||||||    
T  28621180 agcttatacaaaaacaatttaactttattttatcttttgtta 28621221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 34611872 - 34611839
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||| |||||||||||||||||||||||||    
T  34611872 agcttataagaaaacaatttaactttattttatc 34611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 3181105 - 3181177
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgt 254  Q
    |||||| ||| ||| |||||||||| ||||||  | ||||||||||||  ||| ||||||||||||| |||||    
T  3181105 agctctccaagataacttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatcttttgt 3181177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 24332931 - 24332856
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgct 302  Q
    |||||| |||||||||||||||| ||| ||| ||||||| | ||||||||| | |||||| || ||||| |||||||    
T  24332931 aaacaaattaactttattttatc-ttttttaaagaaatagcttatacataatcacttataggataagtgcttatgct 24332856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 31624255 - 31624195
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||| |||||||||||||  |||||||||| ||||||| ||||||| | |||||| ||||    
T  31624255 ttatacgaaaacaatttaaacttattttatcttttgttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 51630141 - 51630073
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||    
T  51630141 tcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttg 51630073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 25409904 - 25409795
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtt 296  Q
    |||| ||||| |||||| | ||||||||||||||||||||| |||| ||||| ||| |||  |||||| | || ||||||||  |||||||| |||||||    
T  25409904 cttacgaaaacagtttatatcttatatgaaaacaatttaaccttatcttatctttttttaatgaaataccttagacataagcagttatatgataagtgtt 25409805  T
Q  297 tatgctataa 306  Q
    ||||||||||    
T  25409804 tatgctataa 25409795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 288
Target Start/End: Complemental strand, 30024700 - 30024627
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||| ||||||  |||||||||    
T  30024700 agcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatga 30024627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 54325085 - 54325190
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||| ||||||||| ||| |||||||||||||||| ||| ||||||||||||| ||||| | |||||||   |||||| |||| ||||||||| |||    
T  54325085 atagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataag 54325184  T
Q  293 tgttta 298  Q
    | ||||    
T  54325185 tattta 54325190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 288
Target Start/End: Original strand, 22684584 - 22684659
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||||| ||||  ||||||||    
T  22684584 acagcttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatga 22684659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 28300336 - 28300399
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttt 245  Q
    |||||||||| ||||| ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  28300336 agctcttcaagatagcctatgaaaatagtttatagcttatacaaaaacaatttaactttatttt 28300399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 8130192 - 8130103
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    |||||||||| |||||| |||||||||||||| ||||| ||||||| ||||| ||||||| ||||| |||  |||| ||||| |||||||    
T  8130192 cttatgaaaacagtttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcacttatat 8130103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 26883995 - 26883934
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||||||| |||||||||    
T  26883995 agcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataa 26883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 29263392 - 29263307
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||||||||| |  |||  |||||| |||||||||| ||||||||||||||| | ||||||||||||||| |||| ||||||    
T  29263392 atagcttatgaaaacaacttatcgcttatttgaaaacaatgtaactttattttatcatctgttagagaaataacttatagataagc 29263307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 6364171 - 6364087
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||||||||| | ||| ||||||| |||| | ||||| ||||||||||||| ||||||| ||||||| | ||||||||||    
T  6364171 atagcttatgaaaattgcttatagcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 30207620 - 30207719
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 293  Q
    ||||||||||||| |  ||| |||||||||||||||| ||| | ||||||||||  ||||||| |||| |||| ||||||||||| ||||||||| ||||    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacataagcacttatatgataagt 30207718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 30338641 - 30338725
Alignment:
Q  195 agcttatgaaaat-agtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||||||  |||||| |||||||||||||||| |||||||||||| |||| ||||||| |||||||   |||||||||||    
T  30338641 agcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataagc 30338725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 304
Target Start/End: Complemental strand, 44319971 - 44319861
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaag 292  Q
    ||||||||| ||||||| ||  |||||||||||||||| ||  ||||||||||||| ||| ||| |||||||   ||||||| ||| ||||||||| |||    
T  44319971 atagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttattttatc-ttttttatagaaatagtttatacatgagcacttatatgataag 44319873  T
Q  293 tgtttatgctat 304  Q
    || |||||||||    
T  44319872 tgcttatgctat 44319861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 24193583 - 24193465
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatg 316  Q
    |||||||||||| | ||||||| | ||||||  ||||||  | ||||||| ||||||||||  ||||||||| ||| ||||||||||||||| || |||     
T  24193583 cttatatgaaaatagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataagtgctcaatt 24193484  T
Q  317 aagtttttaatgcaaacaa 335  Q
    ||||| || || |||||||    
T  24193483 aagttgtttatccaaacaa 24193465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 24161016 - 24160927
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||||||||||| | |  ||| ||| || ||||||| |||||||||| |||||||| ||||||| ||||||| | |||||||||||    
T  24161016 caaaatagcttatgaacacaacttatagcctacatgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataagc 24160927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 47119005 - 47119085
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    ||||||| ||||| |||||| | |  ||| |||||||||||||||||||||||||| ||||||| |||| || ||||||||    
T  47119005 tcttcaagatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatcttttgatatagaaataa 47119085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 49219170 - 49219082
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 272  Q
    ||||| || |||| ||||||||| |  ||| |||||||||||||| ||||| ||||||||||||  ||||||| ||||||||| |||||    
T  49219170 ctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatac 49219082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 437477 - 437540
Alignment:
Q  190 aaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    ||||||||||||||||| |  ||| | |||||||||| ||||||||||||||||||||| ||||    
T  437477 aaaatagcttatgaaaacaacttaaaacttatatgaacacaatttaactttattttatcttttg 437540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 6978757 - 6978820
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||||||||  || ||||||||||| | ||||||| ||||||||| |||||||    
T  6978757 atagcttatgaaaatagtttgtagtttatatgaaaatagtttaactatattttatcttttgtta 6978820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 8703690 - 8703784
Alignment:
Q  215 agcttatatgaaaacaatttaa--ctttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||||||||||||||| ||| |  |||| ||||||| ||||||||||||||| | ||||||||||| || || ||| |||| |||||| ||||||    
T  8703690 agcttatatgaaaacagtttgatacttttttttatcctttgttagagaaatagcttatacataagcactcatctgataagtatttatgttataag 8703784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 24444061 - 24443946
Alignment:
Q  192 aatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaa 291  Q
    ||||||||||||||| |  ||| ||||||||||||||   ||| | ||||||||||  ||||||  ||||||  | ||||||||||  ||||||||| ||    
T  24444061 aatagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataa 24443962  T
Q  292 gtgtttatgctataag 307  Q
    ||| ||||||||||||    
T  24443961 gtgcttatgctataag 24443946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 27043900 - 27043963
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||| ||||||||||||||||||||||||| ||||||| | || || | |||||||||||    
T  27043900 agcttatacgaaaacaatttaactttattttatcctttgttatataagtaccttatacataagc 27043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 31038917 - 31038996
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacat 274  Q
    ||||||| ||||| | ||| | |||||||||||||||||| |||||||||||||  || ||  |||||||||||||||||    
T  31038917 agcttataaaaatggcttataacttatatgaaaacaatttgactttattttatctattattgtagaaataacgtatacat 31038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 32421135 - 32421072
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||||| |||  | ||| |||||||||| |||||||| ||||||||||||||    
T  32421135 tcttcaaaatagcttatggaaactgcttatagcttatatgtaaacaattaaactttattttatc 32421072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 278
Target Start/End: Complemental strand, 47946214 - 47946135
Alignment:
Q  199 tatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    |||||||| | |||| |||||||| |||||||||||||||| |||||||| |  |||| ||||||||| |||| ||||||    
T  47946214 tatgaaaacaatttatagcttatacgaaaacaatttaacttcattttatcttacgttatagaaataacttataaataagc 47946135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 49803214 - 49803151
Alignment:
Q  212 tacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    |||| ||||| ||||||||||||||||| |||||||| |||| || ||||||||| ||||||||    
T  49803214 tacaacttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 3155633 - 3155543
Alignment:
Q  185 tcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||| |||| ||||||||| || ||  ||||| ||  |||||||||||||||||||||||| |||| || ||||||| | ||||||||    
T  3155633 tcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 17884101 - 17884019
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||| ||| |||||||||||||| |  | | | ||||||  |||||||||||||||||||||||| ||||||| |||||||    
T  17884101 agctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttttgttatagaaata 17884019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 29778828 - 29778747
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    ||||||||||  ||||||||||||| |  |||||||||||||||||||||||| || ||| |||||  ||||||| |||||||    
T  29778828 agctcttcaaggtagcttatgaaaacaacttacagcttatatgaaaacaatttcaccttaatttat-ttttgttaaagaaata 29778747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 35290224 - 35290290
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatc 248  Q
    ||||||| || |||||||||||||| || ||  | |||||||||| |||||||||||||||||||||    
T  35290224 agctcttaaagatagcttatgaaaaaagcttctaacttatatgaatacaatttaactttattttatc 35290290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 307
Target Start/End: Original strand, 35727109 - 35727195
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||| |||||||| ||||||| | | ||||||| ||||||| | ||  ||||||||||| ||||| |||||| |||||||||||    
T  35727109 tatgaaatcaatttaattttatttgaacttttgttatagaaatagcttacgcataagcccttttatgataagtgtgtatgctataag 35727195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 47970310 - 47970240
Alignment:
Q  223 tgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagt 293  Q
    |||||| | ||| |||| |||||||| ||||||| ||||||| | ||||||||||| ||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatgacaagt 47970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 50298546 - 50298438
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat-atgacaagtg 294  Q
    |||||||||||  | ||| ||||||| |||||||||||||||||||  |||||  ||||||  |||| ||| |||||||||||  |||| |||| |||||    
T  50298546 gcttatgaaaactgattatagcttatgtgaaaacaatttaacttta--ttatc--ttgttatggaaacaacttatacataagcatttatcatgataagtg 50298451  T
Q  295 tttatgctataag 307  Q
    |||||||||||||    
T  50298450 tttatgctataag 50298438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 53626795 - 53626729
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    ||||||||||| || ||| |||||||||||||||| ||| | ||||||||||| ||||||| |||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 264
Target Start/End: Complemental strand, 4071882 - 4071833
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||||||| ||||| ||||||||||||| ||||||| |||||||    
T  4071882 agcttatatgaaaataatttgactttattttatcttttgttatagaaata 4071833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 26520277 - 26520346
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    ||||| ||| ||||||| ||| |||||| | ||||||||||||||||||||| ||| ||||||| |||||    
T  26520277 atagcatataaaaatagcttatagcttacacgaaaacaatttaactttatttcatcttttgttatagaaa 26520346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 247
Target Start/End: Complemental strand, 40174584 - 40174531
Alignment:
Q  194 tagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttat 247  Q
    ||||||||||||| || ||| ||||| ||||||||||||||||||||| |||||    
T  40174584 tagcttatgaaaacagcttatagcttttatgaaaacaatttaactttaatttat 40174531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 47800656 - 47800580
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataa 265  Q
    |||||||||| ||||||||||||||       |||||||||  |||||| ||||||||||||||||| ||||||| ||||||||    
T  47800656 agctcttcaagatagcttatgaaaa-------cagcttatacaaaaacattttaactttattttatcttttgttatagaaataa 47800580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 486073 - 485989
Alignment:
Q  224 gaaaacaatttaacttt-attttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    ||||||||||| ||||| |||||||| ||||||  ||||||| | ||||||||||| ||| ||||| ||| | ||||||||||||    
T  486073 gaaaacaatttgacttttattttatcttttgttttagaaatagcatatacataagcacttttatgataagcgcttatgctataag 485989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 4191734 - 4191666
Alignment:
Q  221 tatgaaaacaatttaactttatttt-atcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||| ||| |||||||||| ||| ||||||| ||||||| | ||||||||||| |||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatga 4191666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 5219527 - 5219643
Alignment:
Q  172 tatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtata 271  Q
    ||||||| | ||||||| || |||| || ||||||||| |||    ||||||||||| | ||||||||||||||||| ||| ||| ||| ||| | ||||    
T  5219527 tatttttttaagctcttgaagatagtttgtgaaaatagcttattatttatatgaaaatagtttaactttattttatcttttattatagagatagcatata 5219626  T
Q  272 cataagcccttatatga 288  Q
    ||| ||| |||||||||    
T  5219627 catgagcacttatatga 5219643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 29373929 - 29374021
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcc 279  Q
    ||||||||| |||||||||| |  ||| |||||||||||| ||| ||| || |||||||||| | ||||| ||||||| | |||| |||||||    
T  29373929 ttcaaaataacttatgaaaacaaattatagcttatatgaatacattttgacattattttatcttctgttatagaaatagcttatatataagcc 29374021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 42685450 - 42685386
Alignment:
Q  189 caaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||||||||||||||| |  ||| ||||||||  ||||||||||||||| |||||||| ||||    
T  42685450 caaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatcttttg 42685386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 5131309 - 5131364
Alignment:
Q  222 atgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataag 277  Q
    ||||||||| ||||||||||||||||| ||||||| | ||| ||| ||||||||||    
T  5131309 atgaaaacattttaactttattttatcttttgttatataaacaacttatacataag 5131364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 7601749 - 7601690
Alignment:
Q  225 aaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||||||||||||||| |||| || || |||| | ||||||||||| |||||    
T  7601749 aaaacaatttaactttattttatcctttgctataggaatagcttatacataagcgcttat 7601690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 11389544 - 11389457
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    |||||||||||   ||| || |||||| |||||| |||||||||| |||||| ||| ||| ||||||||  ||||||||||| |||||    
T  11389544 cttatgaaaatgacttatagtttatattaaaacagtttaactttactttatctttttttatagaaataatttatacataagcacttat 11389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 18630702 - 18630607
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||| |||||| |  ||| ||||||||||||||| | || ||||||||||||| |||||||  ||||||   ||| ||||||| |||||||||    
T  18630702 atagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttatgcataagcgcttatatga 18630607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 24091481 - 24091434
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||||||||| |||||| |||||||||||||| ||||| |||||||||    
T  24091481 cttatgaaaacagtttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 25548182 - 25548298
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaatgaagt 320  Q
    ||||||||||| |||||||||||||| |  |||||| ||||||| | ||| ||||||| ||| |||| |||||| ||||| ||||| | || ||| || |    
T  25548182 tatgaaaacaacttaactttattttacc--ttgttatagaaatagcttatgcataagcacttttatggcaagtgcttatgatataattgcttaattaaat 25548279  T
Q  321 ttttaatgcaaacaagacc 339  Q
    | ||||| |||||| ||||    
T  25548280 tgttaatccaaacaggacc 25548298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 286
Target Start/End: Complemental strand, 28623300 - 28623218
Alignment:
Q  206 atagtttacagcttatatgaaaacaa--tttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    |||||||| | |||| |||||||||   |||||| |||||||||| ||||||| | ||||||| ||||||||||| |||||||    
T  28623300 atagtttataacttacatgaaaacacagtttaacattattttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 41701509 - 41701552
Alignment:
Q  213 acagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||    
T  41701509 acagcttatatgaaaacgatttgactttattttatcttttgtta 41701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 43372017 - 43372080
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||||||  |||||| ||||||||| |||||| ||| ||| ||||||||| |||||||    
T  43372017 atagcttatgaaatcagtttatagcttatataaaaacagtttgactgtattttatcttttgtta 43372080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 52746888 - 52746951
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    |||||||||||||| || |||  ||||| |  |||||||||||||||||||||||| |||||||    
T  52746888 atagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttttgtta 52746951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 19422415 - 19422345
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    |||||||||||   ||| |||||||| |||| ||||||| ||||||||| |||||||||||  ||||||||    
T  19422415 ttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatga 19422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 22662298 - 22662364
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||||||||| || |||| |||||||| ||| || |||||||||| | ||||| |||||    
T  22662298 gcttatgaaaatagtttatagattatctgaaaacagtttgaccttattttatcttgtgttacagaaa 22662364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 22666777 - 22666843
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||||||||||| || |||| |||||||| ||| || |||||||||| | ||||| |||||    
T  22666777 gcttatgaaaatagtttatagattatctgaaaacagtttgaccttattttatcttgtgttacagaaa 22666843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 276
Target Start/End: Complemental strand, 23819162 - 23819029
Alignment:
Q  142 ttatgacatgtttatgacttgttttcacgctatttttctgagctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaacttta 241  Q
    |||||||||||  || | |||||||||   ||||| | | |||||||||| |||||||||||||| |  ||| | |||||||||||||| ||| |||  |    
T  23819162 ttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaacagtttgactaca 23819063  T
Q  242 ttttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||  |||||||  |||||||| |||||||||    
T  23819062 ttttat-atttgttatggaaataacttatacataa 23819029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 42321952 - 42321990
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  42321952 ttatatgaaaacaatttgactttattttatcatttgtta 42321990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 44119227 - 44119293
Alignment:
Q  210 tttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    |||| ||||||||||||||||  || ||||| ||||||| |||| || ||||||||| |||||||||    
T  44119227 tttatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataa 44119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 45128363 - 45128453
Alignment:
Q  198 ttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatga 288  Q
    ||||||||| | |||| ||||||||||| || ||||| | || |||||||| ||||||| |||||||   ||||||||||  |||||||||    
T  45128363 ttatgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataagttcttatatga 45128453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 51555948 - 51556030
Alignment:
Q  226 aaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagt 308  Q
    ||||||| | ||||||||||||| ||||||| |  |||| | ||||||||||| ||||||||| || || ||||| |||||||    
T  51555948 aaacaatctgactttattttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagt 51556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 52735155 - 52735073
Alignment:
Q  182 agctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaata 264  Q
    |||||||||| |||||||| ||||| |   || | |||||||||||  ||||| ||||||||||||| ||||||| |||||||    
T  52735155 agctcttcaagatagcttacgaaaacaacatataacttatatgaaagtaatttgactttattttatcttttgttacagaaata 52735073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 13949914 - 13949947
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatc 248  Q
    |||||||||||||||||||| |||||||||||||    
T  13949914 agcttatatgaaaacaatttgactttattttatc 13949947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 20907369 - 20907328
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaattt 234  Q
    ||||||| |||||| |||||| ||||||||||||||||||||    
T  20907369 atagcttgtgaaaacagtttatagcttatatgaaaacaattt 20907328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 25885877 - 25885812
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaa 262  Q
    |||||||||| |  ||| |||||| | ||||||||||||||||||||||||| |||| || |||||    
T  25885877 cttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaa 25885812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 27321877 - 27321930
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    ||||||| ||||||||| |||  |||| |||||||||||||| |||||||||||    
T  27321877 atagcttttgaaaatagcttattgcttgtatgaaaacaattttactttatttta 27321930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 53155285 - 53155202
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagc 278  Q
    ||||||||||||||||||||| ||| |||||||||| | ||  |||||| |||||| ||||||| | ||||| | |||||||||||    
T  53155285 atagcttatgaaaatagtttatagcatatatgaaaatagttcgacttta-tttatcttttgttata-aaatagcttatacataagc 53155202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 54327519 - 54327576
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatac 272  Q
    |||||||||||||||| ||| ||||| ||||||| ||||||| ||||| ||| |||||    
T  54327519 agcttatatgaaaacagtttgactttgttttatcttttgttatagaaacaacttatac 54327576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 3175973 - 3175913
Alignment:
Q  193 atagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttg 253  Q
    |||||||||||||| || ||| | ||||  |||||||||||| ||||||||||||| ||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttg 3175913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Original strand, 4663760 - 4663836
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttata 285  Q
    |||| |||||||||| |||| | |||  ||| |||||||  ||||||| ||||||||| ||||||||||| ||||||    
T  4663760 gttttcagcttatataaaaatagtttggcttcattttattctttgttatagaaataacttatacataagcacttata 4663836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 8422909 - 8422998
Alignment:
Q  215 agcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataa 306  Q
    ||||||||||||||||||   ||||||||||||| ||| ||| | ||||| | ||||||||||| | ||||||| |  || |||||||||||    
T  8422909 agcttatatgaaaacaatg--actttattttatctttttttataaaaatagcttatacataagcacatatatgatacatgattatgctataa 8422998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 11917556 - 11917508
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataac 266  Q
    ||||||||||| ||||| ||||||||||||| ||||||| | |||||||    
T  11917556 ttatatgaaaataatttgactttattttatcttttgttacaaaaataac 11917508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 21952970 - 21952930
Alignment:
Q  206 atagtttacagcttatatgaaaacaatttaactttatttta 246  Q
    |||| ||| |||||||||||||||||||| |||||||||||    
T  21952970 atagcttatagcttatatgaaaacaatttgactttatttta 21952930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 32724125 - 32724037
Alignment:
Q  209 gtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgttt 297  Q
    |||||| ||||||||||||| | ||| ||||||||||||| ||||| | |||||||   || |||||||| || |||||| ||| ||||    
T  32724125 gtttacggcttatatgaaaatagtttgactttattttatcttttgtaatagaaatagattagacataagcactgatatgagaagcgttt 32724037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 35411064 - 35411123
Alignment:
Q  196 gcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgtta 256  Q
    ||||||||||| ||||||  |||| |||||||||||||| |||| ||||||| ||||||||    
T  35411064 gcttatgaaaacagtttatggctt-tatgaaaacaatttgacttaattttatagtttgtta 35411123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 44138764 - 44138712
Alignment:
Q  191 aaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttatt 243  Q
    |||||||||||||||| | |||| ||||||||||||||||  || ||||||||    
T  44138764 aaatagcttatgaaaacattttatagcttatatgaaaacagattgactttatt 44138712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 44249285 - 44249225
Alignment:
Q  216 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||| | ||| ||||||||||| ||||||| |||||||  |||||||| |||||||||    
T  44249285 gcttatacggaaataatttaactttgttttatcttttgttattgaaataacttatacataa 44249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 46715036 - 46715096
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattt 244  Q
    |||| ||| ||| ||||||||||||||||  ||||||||| |||||||||| ||| |||||    
T  46715036 ctctccaagataacttatgaaaatagtttttagcttatataaaaacaatttgactgtattt 46715096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 49004024 - 49004109
Alignment:
Q  197 cttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||||||||  ||| |||| ||| ||||||||||||||  ||||||||| |||| || ||||||  | ||||||||||| |||||    
T  49004024 cttatgaaaataagttatagctaatacgaaaacaatttaac--tattttatcttttgctatagaaattgcttatacataagcgcttat 49004109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 51044534 - 51044590
Alignment:
Q  221 tatgaaaacaa-tttaactttattttatcgtttgttagagaaataacgtatacataa 276  Q
    ||||||||||| ||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  51044534 tatgaaaacaagtttgactttattttatcttttgttatagaaatagcttatacataa 51044590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Original strand, 1145 - 1250
Alignment:
Q  216 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaat 315  Q
    |||||||||| || | ||| ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |   |||||||||||||||||| |||    
T  1145 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaat 1244  T
Q  316 gaagtt 321  Q
     |||||    
T  1245 taagtt 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 2830 - 2725
Alignment:
Q  216 gcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataagtactaaat 315  Q
    |||||||||| || | ||| ||||||||||||| ||||||| ||||||| | ||||||||||| ||||||||| |   |||||||||||||||||| |||    
T  2830 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgatagacgtttatgctataagtacttaat 2731  T
Q  316 gaagtt 321  Q
     |||||    
T  2730 taagtt 2725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 1763 - 1866
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||| ||||||||||||||||  |  ||| ||| |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||    
T  1763 ctcttaaaaatagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcactta 1862  T
Q  284 tatg 287  Q
    ||||    
T  1863 tatg 1866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 287
Target Start/End: Original strand, 3853 - 3956
Alignment:
Q  184 ctcttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagccctta 283  Q
    ||||| ||||||||||||||||  |  ||| ||| |||||||||| || |||||||||||||||| ||||||| |||| || | |||| |||||| ||||    
T  3853 ctcttaaaaatagcttatgaaaccaacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcactta 3952  T
Q  284 tatg 287  Q
    ||||    
T  3953 tatg 3956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 308
Target Start/End: Complemental strand, 42644 - 42524
Alignment:
Q  187 ttcaaaatagcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatat 286  Q
    |||| ||||||||||||||| |  | | ||||||||||||| ||  || ||| ||||||||| ||||||| |||||| || ||||||||||| |||||||    
T  42644 ttcataatagcttatgaaaacaactaatagcttatatgaaa-caggtttactctattttatcttttgttatagaaatgacttatacataagcacttatat 42546  T
Q  287 gacaagtgtttatgctataagt 308  Q
    || || ||| | ||||||||||    
T  42545 gataaatgtgtctgctataagt 42524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 51563 - 51508
Alignment:
Q  220 atatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacata 275  Q
    ||||||||||||||||||||||||||||  ||||||| | ||||||| ||||||||    
T  51563 atatgaaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 9847 - 9937
Alignment:
Q  217 cttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttatgctataag 307  Q
    |||||||||||||  ||| |||| |||||||  ||||||| ||||||||| ||||||||||| | ||||||| |||  ||||| |||||||    
T  9847 cttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataagcatttattctataag 9937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 6713 - 6791
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 299  Q
    |||||||||||||| |||| | |||||  ||||||| |||||||   ||||||||||| ||||||||| ||||| ||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 6791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 20292 - 20226
Alignment:
Q  218 ttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttat 284  Q
    ||||||||||||||||| || |||||||||  ||| ||| ||||||||| |||||||| || |||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacatacgcacttat 20226  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 116632 - 116710
Alignment:
Q  221 tatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatgacaagtgtttat 299  Q
    |||||||||||||| |||| | |||||  ||||||| |||||||   ||||||||||| ||||||||| ||||| ||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 116710  T

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Target: scaffold0428 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 3924 - 3832
Alignment:
Q  195 agcttatgaaaatagtttacagcttatatgaaaacaatttaactttattttatcgtttgttagagaaataacgtatacataagcccttatatg 287  Q
    ||||||||||||||| ||| ||| |||| ||||||| | | |||| | |||||| ||||||| | ||||| | || |||||||| ||||||||    
T  3924 agcttatgaaaatagcttatagcatataggaaaacagtatgacttcagtttatcttttgttataaaaatagcttacacataagcacttatatg 3832  T

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