View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15357_high_19 (Length: 331)

Name: NF15357_high_19
Description: NF15357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15357_high_19
NF15357_high_19
[»] chr8 (14 HSPs)
chr8 (20-230)||(36697686-36697896)
chr8 (224-325)||(2369300-2369401)
chr8 (224-325)||(36697914-36698015)
chr8 (18-87)||(16723685-16723754)
chr8 (76-161)||(20104425-20104510)
chr8 (236-325)||(20104598-20104686)
chr8 (20-87)||(43307421-43307488)
chr8 (18-87)||(43306688-43306757)
chr8 (18-85)||(23546147-23546214)
chr8 (18-85)||(23546885-23546952)
chr8 (18-86)||(37551001-37551069)
chr8 (18-58)||(9044188-9044228)
chr8 (18-58)||(24287620-24287660)
chr8 (18-58)||(28540373-28540413)
[»] chr5 (8 HSPs)
chr5 (18-87)||(35424268-35424337)
chr5 (18-86)||(14098498-14098566)
chr5 (18-87)||(33574003-33574072)
chr5 (18-93)||(10470062-10470137)
chr5 (20-58)||(12696487-12696525)
chr5 (18-52)||(18861893-18861927)
chr5 (18-51)||(26016226-26016259)
chr5 (18-54)||(18862701-18862737)
[»] chr3 (12 HSPs)
chr3 (19-82)||(29749317-29749380)
chr3 (18-87)||(103752-103821)
chr3 (20-86)||(47393897-47393963)
chr3 (18-71)||(31595137-31595190)
chr3 (18-71)||(31595853-31595906)
chr3 (43-87)||(104496-104540)
chr3 (18-67)||(48058277-48058326)
chr3 (38-82)||(11617438-11617482)
chr3 (18-58)||(54516964-54517004)
chr3 (18-58)||(36244156-36244196)
chr3 (18-58)||(40934836-40934876)
chr3 (29-77)||(55058528-55058576)
[»] chr4 (6 HSPs)
chr4 (20-82)||(49574726-49574788)
chr4 (18-86)||(19638105-19638173)
chr4 (18-90)||(39832000-39832072)
chr4 (18-58)||(21436560-21436600)
chr4 (18-58)||(43428478-43428518)
chr4 (22-58)||(33581143-33581179)
[»] chr7 (7 HSPs)
chr7 (21-73)||(29064744-29064796)
chr7 (18-58)||(19068467-19068507)
chr7 (18-88)||(45432939-45433009)
chr7 (20-77)||(43448506-43448563)
chr7 (22-58)||(14253955-14253991)
chr7 (22-58)||(14255619-14255655)
chr7 (18-58)||(19069257-19069297)
[»] chr1 (11 HSPs)
chr1 (18-82)||(14237365-14237429)
chr1 (18-82)||(15601450-15601514)
chr1 (31-82)||(14235966-14236017)
chr1 (21-86)||(36391333-36391398)
chr1 (24-71)||(39869984-39870031)
chr1 (18-84)||(2071452-2071518)
chr1 (19-58)||(49359642-49359681)
chr1 (18-60)||(2070789-2070831)
chr1 (20-87)||(12644854-12644922)
chr1 (18-58)||(19790842-19790882)
chr1 (18-58)||(32994029-32994069)
[»] scaffold1370 (1 HSPs)
scaffold1370 (18-86)||(204-272)
[»] chr6 (6 HSPs)
chr6 (18-86)||(20508613-20508681)
chr6 (22-58)||(4279092-4279128)
chr6 (22-58)||(4284355-4284391)
chr6 (18-58)||(15997541-15997581)
chr6 (18-58)||(20756415-20756455)
chr6 (18-58)||(32261206-32261246)
[»] chr2 (5 HSPs)
chr2 (18-58)||(25616852-25616892)
chr2 (20-87)||(30784880-30784946)
chr2 (18-58)||(30266323-30266363)
chr2 (18-58)||(41768800-41768840)
chr2 (20-58)||(6257773-6257811)
[»] scaffold0285 (1 HSPs)
scaffold0285 (18-86)||(17517-17585)
[»] scaffold0159 (1 HSPs)
scaffold0159 (18-58)||(28156-28196)
[»] scaffold0069 (1 HSPs)
scaffold0069 (37-82)||(15034-15079)
[»] scaffold0086 (1 HSPs)
scaffold0086 (18-90)||(8414-8486)


Alignment Details
Target: chr8 (Bit Score: 175; Significance: 3e-94; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 36697686 - 36697896
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaattgtacggtgcatgcttaaagttccacacaaaat 119  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36697686 catttcaaatgagaggactttttaaatgagagggtgagaggagtaaataacagcccttagatcaaattgtacggtgcatgctaaaagttccacacaaaat 36697785  T
Q  120 taattgcacaggatttatttacaccgcttctccttcctcttcgcggcatccctcctctgcatcctcattcttactccaaaacaagcttaaggttaatccc 219  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  36697786 taattgcacaggatttatttatactgcttctccttcctcttcgcggcatccctcctctgcatcctcattctcactccaaaacaagcttaaggttaatcac 36697885  T
Q  220 aactaattttt 230  Q
     || |||||||    
T  36697886 gaccaattttt 36697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 2369300 - 2369401
Alignment:
Q  224 aatttttggaacccattatcagaatctattttgcctccatatcccccatgttattttaaggggaatcatgaacgatgctgctcctcatctctttcttctc 323  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  2369300 aatttctggaacccattatcataatctattttgcctccatatccccaatgttattttaagaggaatcatgaacgatgctgctcctcatctctttcttatc 2369399  T
Q  324 ac 325  Q
    ||    
T  2369400 ac 2369401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 36697914 - 36698015
Alignment:
Q  224 aatttttggaacccattatcagaatctattttgcctccatatcccccatgttattttaaggggaatcatgaacgatgctgctcctcatctctttcttctc 323  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||    
T  36697914 aatttctggaacccattatcagaatctattttgcctccatatcctccatgttattttaagaggaatcatgaacgatgttgctcctcatctctttcttatc 36698013  T
Q  324 ac 325  Q
    ||    
T  36698014 ac 36698015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 16723685 - 16723754
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  16723685 ggcatttcaaatgagaggacttttaaaatgagagggtgagaggagtaaataacagcccttagatcaaatt 16723754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 20104425 - 20104510
Alignment:
Q  76 ttagatcaaattgtacggtgcatgcttaaagttccacacaaaattaattgcacaggatttatttacaccgcttctccttcctcttc 161  Q
    ||||||||||||||||||||||   | ||||| ||||||||||| ||||||||||||||| ||| || ||||||| ||||||||||    
T  20104425 ttagatcaaattgtacggtgcagattaaaagtaccacacaaaataaattgcacaggatttgtttccaacgcttcttcttcctcttc 20104510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 20104598 - 20104686
Alignment:
Q  236 ccattatcagaatctattttgcctccatatcccccatgttattttaaggggaatcatgaacgatgctgctcctcatctctttcttctcac 325  Q
    ||||||||  ||||||||| |||||||||||||| |||||||||||||  |||||||| | ||||||||||||| |||||||||| ||||    
T  20104598 ccattatcgaaatctatttggcctccatatcccc-atgttattttaagaagaatcatggaggatgctgctcctcgtctctttcttatcac 20104686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 43307488 - 43307421
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    ||||| || ||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43307488 cattttaaatgagatgatttttaaaatgagagggtgagaggagtaaataacagcccttagatcaaatt 43307421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 43306688 - 43306757
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||||| |||||||| |||| |||||||||||||  | ||||||||||||| ||||||||||||||    
T  43306688 ggcatttcaaatgagaggatttttaaaatgagagggtggaaggagtaaataacagtccttagatcaaatt 43306757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 23546147 - 23546214
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaa 85  Q
    |||||||||| ||||||| | |||||||||||||||||||| ||||| |||| |||| ||||||||||    
T  23546147 ggcatttcaaatgagagggcattttaaatgagagggtgagaggagtatataatagccattagatcaaa 23546214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 23546952 - 23546885
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaa 85  Q
    |||||||||| ||||||  |||||||||||||||||||||| ||||| |||| |||| ||| ||||||    
T  23546952 ggcatttcaaatgagagagctttttaaatgagagggtgagaggagtacataatagccattaaatcaaa 23546885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 37551001 - 37551069
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||||| ||||||| |||||||||||||||| ||||| |||| ||||| | || |||||| ||||    
T  37551001 ggcatttcaaatgagagggctttttaaatgagaggatgagaggagttaataagaaccattagattaaat 37551069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 9044188 - 9044228
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||||| || ||||| ||||||||||||||||||||||||    
T  9044188 ggcattttaaatgagatgactttttaaatgagagggtgaga 9044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 24287660 - 24287620
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  24287660 ggcatttcaaatgagagggttttttaaatgagagggtgaga 24287620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 28540413 - 28540373
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| ||||||||||||| |||||||||| |||||    
T  28540413 ggcatttcaaatgagaggacttttaaaatgagaggatgaga 28540373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 35424268 - 35424337
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  35424268 ggcatttcaaatgagaggacttttaaaatgagagggtgagaggagtaaataacagcccttagatcaaatt 35424337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 14098498 - 14098566
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    ||||||| || |||||||||||||||||||||||||||||| || ||||| ||| || |||||| ||||    
T  14098498 ggcattttaaatgagaggactttttaaatgagagggtgagaggattaaatcacaaccattagatgaaat 14098566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 33574072 - 33574003
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    ||||| |||||||||||||||||| |||||||||||||||| ||  ||||||   ||||||||| |||||    
T  33574072 ggcatatcaagtgagaggacttttaaaatgagagggtgagaggatgaaataatgacccttagattaaatt 33574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 10470062 - 10470137
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaattgtacgg 93  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || | | ||| |||| |||||| |||||| ||||    
T  10470062 ggcatatcaagtgagaggattttttaaatgagaggatgagaggactcattaatagccattagattaaattgaacgg 10470137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 12696487 - 12696525
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  12696487 catttcaaatgagatgactttttaaatgagagggtgaga 12696525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 18861893 - 18861927
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagg 52  Q
    |||||||||||||||||||||||| ||||||||||    
T  18861893 ggcatttcaagtgagaggacttttaaaatgagagg 18861927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 26016259 - 26016226
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagag 51  Q
    |||||||||| |||||||||||||||||||||||    
T  26016259 ggcatttcaaatgagaggactttttaaatgagag 26016226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 18862737 - 18862701
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggt 54  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18862737 ggcatttcaagtgagagggcttttaaaatgagagggt 18862701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 29749380 - 29749317
Alignment:
Q  19 gcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  29749380 gcatttcaaatgagaggactttttaaatgagagggtgagaggagtaaataacagctattagatc 29749317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 103752 - 103821
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||||| ||||||||||||| |||| |||||||| || ||||||||||||| ||||||||||||||    
T  103752 ggcatttcaaatgagaggacttttaaaataagagggtgggaggagtaaataacagtccttagatcaaatt 103821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 47393897 - 47393963
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||| |||||||||||| ||||||||||||||||| || ||||| ||| || |||||||||||    
T  47393897 catttcaaatgagaggactttataaatgagagggtgagaggattaaatcacaaccgttagatcaaat 47393963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31595137 - 31595190
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataaca 71  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  31595137 ggcatatcaagtgagaggagtttttaaatgagagggtgagaggagtaattaaca 31595190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 31595906 - 31595853
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataaca 71  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  31595906 ggcatatcaagtgagaggagtttttaaatgagagggtgagaggagtaattaaca 31595853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 104540 - 104496
Alignment:
Q  43 aaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  104540 aaatgagagggtgagaggagtaaataacagctcttagatcaaatt 104496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 48058277 - 48058326
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaat 67  Q
    ||||| |||||||||||||||||| |||||||||||||||| || |||||    
T  48058277 ggcatatcaagtgagaggacttttaaaatgagagggtgagaggattaaat 48058326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 11617438 - 11617482
Alignment:
Q  38 tttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    ||||||||||||||||||||| |||||||||||| || |||||||    
T  11617438 tttttaaatgagagggtgagaggagtaaataacaaccattagatc 11617482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 54516964 - 54517004
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  54516964 ggcatttcaaatgagaggagtttttaaatgagagggtgaga 54517004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 36244196 - 36244156
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| ||||| || |||||||||||||||||||||    
T  36244196 ggcatttcaaatgagatgattttttaaatgagagggtgaga 36244156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 40934876 - 40934836
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| | ||||||| ||||||||||||||||||||    
T  40934876 ggcatttcaaataagaggacattttaaatgagagggtgaga 40934836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 55058528 - 55058576
Alignment:
Q  29 tgagaggactttttaaatgagagggtgagatgagtaaataacagccctt 77  Q
    ||||||||| |||||||||||||||||||| || ||||| ||| |||||    
T  55058528 tgagaggaccttttaaatgagagggtgagaggattaaatcacaaccctt 55058576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 49574788 - 49574726
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||||    
T  49574788 catttcaaatgagaggactttttaaatgagagggtgagaggagtaaataacaaccattagatc 49574726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 19638105 - 19638173
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||||| |||||||| ||||||||||||||||||||| || ||||| ||| || |||||| ||||    
T  19638105 ggcatttcaaatgagaggaatttttaaatgagagggtgagaggattaaatcacaaccattagatgaaat 19638173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 39832072 - 39832000
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaattgta 90  Q
    ||||||||||||||||| ||||||||||||||||| ||||| || | | ||| | || |||||||||||||||    
T  39832072 ggcatttcaagtgagagcactttttaaatgagaggatgagaggactcattaataaccattagatcaaattgta 39832000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 21436560 - 21436600
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  21436560 ggcatttcaaatgagaggagtttttaaatgagagggtgaga 21436600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 43428478 - 43428518
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  43428478 ggcattttaaatgagaggactttttaaatgagagggtgaga 43428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33581179 - 33581143
Alignment:
Q  22 tttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||| |||||||| |||||||||||||||||||||    
T  33581179 tttcaaatgagaggagtttttaaatgagagggtgaga 33581143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 29064744 - 29064796
Alignment:
Q  21 atttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagc 73  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  29064744 atttcaaatgagaggagtttttaaatgagagggtgagaggagtaaataacagc 29064796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19068467 - 19068507
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  19068467 ggcatttcaaatgagaggactttttaaatgagagggtgaga 19068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 45433009 - 45432939
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaattg 88  Q
    ||||||||||||||||||| ||||||||||||||| ||||| || | | ||| |||  |||||||||||||    
T  45433009 ggcatttcaagtgagaggattttttaaatgagaggatgagaggactcattaatagctattagatcaaattg 45432939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 43448563 - 43448506
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagccctt 77  Q
    |||||||| ||||||||| |||||||||||||||||||| || ||||| ||| |||||    
T  43448563 catttcaaatgagaggaccttttaaatgagagggtgagaggattaaatcacaaccctt 43448506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14253955 - 14253991
Alignment:
Q  22 tttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  14253955 tttcaaatgagatgactttttaaatgagagggtgaga 14253991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14255655 - 14255619
Alignment:
Q  22 tttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  14255655 tttcaaatgagatgactttttaaatgagagggtgaga 14255619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19069297 - 19069257
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  19069297 ggcatttcaaaagagatgactttttaaatgagagggtgaga 19069257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14237429 - 14237365
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    |||||||||| | |||| ||||||||||||||||||||||| |||||||||||| || |||||||    
T  14237429 ggcatttcaaataagagcactttttaaatgagagggtgagaggagtaaataacatccattagatc 14237365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 15601514 - 15601450
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    ||||| |||||||||||| |||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  15601514 ggcatatcaagtgagagggctttttaaatgagaggatgagaggagtaaataatagcccttggatc 15601450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 14235966 - 14236017
Alignment:
Q  31 agaggactttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  14235966 agagcactttttaaatgagagggtgagaggagtaaataacagccattagatc 14236017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 36391398 - 36391333
Alignment:
Q  21 atttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    ||||||| |||||||||||| ||||||||||||||||| || ||||| ||| || |||||||||||    
T  36391398 atttcaaatgagaggactttataaatgagagggtgagaggattaaatcacaaccgttagatcaaat 36391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 39870031 - 39869984
Alignment:
Q  24 tcaagtgagaggactttttaaatgagagggtgagatgagtaaataaca 71  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||    
T  39870031 tcaagtgagaggagtttttaaatgagagggtgagacgagtaattaaca 39869984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 2071518 - 2071452
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaa 84  Q
    ||||| |||||||||||||||||| |||||||||||||||| || ||||| | | || |||||||||    
T  2071518 ggcatatcaagtgagaggacttttaaaatgagagggtgagaggattaaatcataacctttagatcaa 2071452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 49359642 - 49359681
Alignment:
Q  19 gcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  49359642 gcatttcaaatgagaggagtttttaaatgagagggtgaga 49359681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 2070789 - 2070831
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatg 60  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||    
T  2070789 ggcatatcaagtgagaagacttttaaaatgagagggtgagatg 2070831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 12644922 - 12644854
Alignment:
Q  20 catttcaagtgagag-gactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    ||||||||||||||| |  |||| |||||||||||||||| || ||||||| | ||||||||| |||||    
T  12644922 catttcaagtgagagtgggttttaaaatgagagggtgagaggattaaataagaacccttagattaaatt 12644854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 19790842 - 19790882
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||| ||||||||||||| |||| ||||||||||||||||    
T  19790842 ggcatatcaagtgagaggagttttaaaatgagagggtgaga 19790882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 32994069 - 32994029
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||  |||||||||||||||||||||    
T  32994069 ggcatttcaaatgagagggttttttaaatgagagggtgaga 32994029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1370 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1370
Description:

Target: scaffold1370; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 204 - 272
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||||| |||||||||||||||||||||||| ||||| |||| ||||| | || |||||| ||||    
T  204 ggcatttcaaatgagaggactttttaaatgagaggatgagaggagttaataagaaccgttagattaaat 272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 20508613 - 20508681
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||| || |||||| ||||    
T  20508613 ggcatttcaaatgagatgactttttaaatgagagggtgagaggattaaatcacaaccattagatgaaat 20508681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4279092 - 4279128
Alignment:
Q  22 tttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4279092 tttcaaatgagaggactttttaaatgagagggtgaga 4279128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 4284391 - 4284355
Alignment:
Q  22 tttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4284391 tttcaaatgagaggactttttaaatgagagggtgaga 4284355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 15997581 - 15997541
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  15997581 ggcatttcaaatgagaggagtttttaaatgagagggtgaga 15997541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 20756455 - 20756415
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  20756455 ggcatttcaaatgagaggagtttttaaatgagagggtgaga 20756415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 32261246 - 32261206
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  32261246 ggcatttcaaatgagatgactttttaaatgagagggtgaga 32261206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 25616852 - 25616892
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  25616852 ggcatttcaaatgagaggactttttaaatgagagggtgaga 25616892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 30784880 - 30784946
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaatt 87  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||| ||| || |||||| |||||    
T  30784880 catttcaaatgagaggactttttaaatgagagggtgagagga-taaatcacaaccattagatgaaatt 30784946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 30266323 - 30266363
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  30266323 ggcatttcaaatgagagcactttttaaatgagagggtgaga 30266363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 41768800 - 41768840
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  41768800 ggcatttcaagtgagagcactttttaaatgagaggatgaga 41768840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 6257811 - 6257773
Alignment:
Q  20 catttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  6257811 catttcaaatgagaggactttttaaatgagaaggtgaga 6257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 17585 - 17517
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaat 86  Q
    |||||||||| |||||||| ||||||||||||||| ||||| |||| ||||| | || |||||| ||||    
T  17585 ggcatttcaaatgagaggattttttaaatgagaggatgagaggagttaataagaaccattagattaaat 17517  T

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Target: scaffold0159 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 28156 - 28196
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgaga 58  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  28156 ggcatttcaaataagaggactttttaaatgagagggtgaga 28196  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 15034 - 15079
Alignment:
Q  37 ctttttaaatgagagggtgagatgagtaaataacagcccttagatc 82  Q
    |||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  15034 ctttttaaatgagaggatgagaggagtaaataatagcccttggatc 15079  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 8486 - 8414
Alignment:
Q  18 ggcatttcaagtgagaggactttttaaatgagagggtgagatgagtaaataacagcccttagatcaaattgta 90  Q
    ||||||||||||||||  ||| ||||||||||||| ||||| || | | ||| | || |||||||||||||||    
T  8486 ggcatttcaagtgagattactctttaaatgagaggatgagaggactcattaataaccattagatcaaattgta 8414  T

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