View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15357_high_24 (Length: 298)
Name: NF15357_high_24
Description: NF15357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15357_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 38531934 - 38532196
Alignment:
| Q |
17 |
taaagtttttggatacgctgggtttagagggtttaaagtgaaactgagcataaattatgtaatgtcacttcaaataactttaaaccatgtaacctcacaa |
116 |
Q |
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| T |
38531934 |
taaagtttttggatacgctgggtttagaggatttaaagtgaaactaag----atttatgtaatgtcacttcaaataactttaaaccatgtaacctcacaa |
38532029 |
T |
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| Q |
117 |
gcatgactgaatgatgaaaatatgcttgtcataattggcaaagtggctagattattatttgcttttgattatataaaaaagtaaaatgatgaaaatttgc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38532030 |
gcatgactgaatgatgaaaatatgcttgtcataattggcaaagtggctagattattatttgcttttgattatataaaaaagtaaaatgatgaaaatttgc |
38532129 |
T |
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| Q |
217 |
ttgtcacatatggtaaaatggctagattattatttgcttctgcttttatatgcaaaaaagttatttg |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38532130 |
ttgtcacatatggtaaaatggctagattattatttgcttctgcttttatatgcaaaaaagttatttg |
38532196 |
T |
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