View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15357_high_33 (Length: 259)
Name: NF15357_high_33
Description: NF15357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15357_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 41174220 - 41174443
Alignment:
| Q |
20 |
atattgatttggaaaaagaatcctaattagtaattagcataaccagaaaaataagggtcatcactcataggagccatagggaataacatactttcttcac |
119 |
Q |
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| T |
41174220 |
atattgatttggaaaaagaatcctaattagtaattagcatagccagaaaaataagggtcatcactcataggagccatagggaataacatactttcttcac |
41174319 |
T |
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| Q |
120 |
ccatcacccatagtgagtctgtggaattatactcccatgatgaacaagtctttggtaaacaagatatgttattattaatattgcagcactcttcattctg |
219 |
Q |
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| T |
41174320 |
ccatcacccatagtgagtctgtggaattatactcccatgatgaagaagtctttggtaaacaagatatgttattattaatattgcagcactcttcattctg |
41174419 |
T |
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| Q |
220 |
tagactattctcttctgatagatc |
243 |
Q |
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|||||||||||||||||||||||| |
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| T |
41174420 |
tagactattctcttctgatagatc |
41174443 |
T |
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