View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15357_low_29 (Length: 270)
Name: NF15357_low_29
Description: NF15357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15357_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 38516953 - 38517194
Alignment:
| Q |
20 |
aactataggctgcagaatcaaattaagggcaacaaaataaattttaataaatagtcatgaaactttaatgcagtagtagcttnnnnnnntggaggctatc |
119 |
Q |
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| T |
38516953 |
aactataggctgcagaatcaaattaagggcaacaaaataaattttaataaatagtcatgaaactttaatgcagtagtagcttaaaaaaatggaggctatc |
38517052 |
T |
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| Q |
120 |
ataaacttactccaattgttccatttgaagatctcaactgttgtaatggatctaatcccattggattgtcaccaactgttcctaggataacaccattcca |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38517053 |
ataaacttactccaattgttccatttgaagatctcaactgttgtaatggatctaatcccattggattgtcaccaactgttcctaggataacaccattcca |
38517152 |
T |
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| Q |
220 |
aactaggaacagaataagtggtataccagtgcctagtattat |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
38517153 |
aactaggaacagaataagtggtataccagtgcctagtattat |
38517194 |
T |
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