View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15357_low_6 (Length: 462)

Name: NF15357_low_6
Description: NF15357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15357_low_6
NF15357_low_6
[»] chr8 (32 HSPs)
chr8 (132-447)||(3120574-3120894)
chr8 (19-80)||(1893965-1894026)
chr8 (19-76)||(17115504-17115561)
chr8 (19-80)||(31581656-31581717)
chr8 (19-78)||(23676835-23676894)
chr8 (19-73)||(17081623-17081677)
chr8 (21-79)||(43276903-43276961)
chr8 (19-80)||(25023268-25023329)
chr8 (19-80)||(37560652-37560713)
chr8 (19-79)||(31478039-31478099)
chr8 (19-79)||(38171550-38171610)
chr8 (19-78)||(32541187-32541246)
chr8 (19-78)||(44827440-44827499)
chr8 (19-73)||(6338287-6338341)
chr8 (19-73)||(16422799-16422852)
chr8 (19-73)||(34395471-34395525)
chr8 (19-74)||(39871234-39871288)
chr8 (19-73)||(40223206-40223260)
chr8 (19-73)||(10618776-10618829)
chr8 (19-73)||(28709276-28709330)
chr8 (19-73)||(28716633-28716687)
chr8 (19-73)||(42142858-42142912)
chr8 (19-73)||(45141578-45141631)
chr8 (19-79)||(39702269-39702329)
chr8 (19-78)||(11741216-11741275)
chr8 (18-73)||(16831503-16831558)
chr8 (19-73)||(32099505-32099559)
chr8 (19-73)||(37587842-37587896)
chr8 (19-57)||(36681570-36681608)
chr8 (18-71)||(9210958-9211010)
chr8 (19-78)||(11298164-11298223)
chr8 (20-79)||(36590099-36590158)
[»] chr6 (13 HSPs)
chr6 (19-77)||(31100138-31100196)
chr6 (19-77)||(32731724-32731782)
chr6 (19-77)||(34233038-34233096)
chr6 (18-73)||(30811271-30811326)
chr6 (19-73)||(14227658-14227712)
chr6 (18-79)||(7317733-7317794)
chr6 (19-73)||(1806438-1806491)
chr6 (19-73)||(2442394-2442448)
chr6 (19-73)||(12297334-12297388)
chr6 (19-73)||(31452077-31452131)
chr6 (19-73)||(34903929-34903983)
chr6 (19-78)||(20804955-20805013)
chr6 (28-79)||(34685140-34685191)
[»] chr7 (25 HSPs)
chr7 (19-79)||(43134369-43134429)
chr7 (19-80)||(21741934-21741995)
chr7 (19-80)||(36246507-36246567)
chr7 (18-71)||(36407200-36407253)
chr7 (19-71)||(42375913-42375964)
chr7 (19-79)||(47471093-47471152)
chr7 (19-78)||(40637291-40637350)
chr7 (19-78)||(43254068-43254127)
chr7 (19-73)||(10312160-10312214)
chr7 (19-73)||(36436124-36436178)
chr7 (19-80)||(32168796-32168857)
chr7 (19-79)||(40258821-40258881)
chr7 (28-80)||(34709203-34709255)
chr7 (19-59)||(42587514-42587554)
chr7 (19-70)||(9487380-9487431)
chr7 (18-73)||(48313553-48313608)
chr7 (19-73)||(483113-483166)
chr7 (19-69)||(44596584-44596634)
chr7 (19-57)||(45687047-45687085)
chr7 (19-52)||(21374624-21374657)
chr7 (20-73)||(47587236-47587288)
chr7 (19-78)||(21254828-21254886)
chr7 (28-78)||(48832186-48832235)
chr7 (28-73)||(27089789-27089834)
chr7 (28-73)||(27188467-27188512)
[»] chr5 (36 HSPs)
chr5 (19-80)||(1174746-1174807)
chr5 (19-73)||(2236630-2236684)
chr5 (18-76)||(8024097-8024155)
chr5 (19-80)||(1711317-1711378)
chr5 (19-71)||(10697240-10697292)
chr5 (19-78)||(12713276-12713335)
chr5 (19-78)||(12774540-12774599)
chr5 (19-73)||(30412726-30412780)
chr5 (19-69)||(30774306-30774356)
chr5 (19-73)||(32382818-32382872)
chr5 (19-73)||(35236782-35236836)
chr5 (19-79)||(4221587-4221646)
chr5 (19-78)||(14647471-14647529)
chr5 (19-73)||(5591558-5591611)
chr5 (19-73)||(13228586-13228640)
chr5 (19-77)||(24793937-24793995)
chr5 (19-73)||(30299667-30299721)
chr5 (19-73)||(36685785-36685839)
chr5 (19-73)||(39744656-39744709)
chr5 (19-71)||(32381788-32381840)
chr5 (18-73)||(13156999-13157054)
chr5 (19-73)||(3037539-3037593)
chr5 (19-69)||(19956421-19956470)
chr5 (18-63)||(6604023-6604068)
chr5 (20-73)||(19525718-19525771)
chr5 (19-78)||(25872322-25872381)
chr5 (398-434)||(32256935-32256971)
chr5 (28-80)||(35235843-35235895)
chr5 (19-78)||(12363727-12363785)
chr5 (18-73)||(15443425-15443480)
chr5 (19-73)||(2671383-2671437)
chr5 (19-57)||(9587301-9587339)
chr5 (19-57)||(11664005-11664043)
chr5 (28-78)||(27130304-27130354)
chr5 (19-57)||(29392220-29392258)
chr5 (28-73)||(9160808-9160853)
[»] chr1 (36 HSPs)
chr1 (19-76)||(29704192-29704249)
chr1 (19-79)||(36301212-36301271)
chr1 (18-73)||(7711061-7711116)
chr1 (18-76)||(19899015-19899073)
chr1 (19-73)||(30721732-30721786)
chr1 (19-73)||(34319362-34319416)
chr1 (19-73)||(36838803-36838857)
chr1 (19-73)||(17046702-17046756)
chr1 (19-73)||(33524501-33524555)
chr1 (19-80)||(1917992-1918052)
chr1 (19-72)||(26204249-26204301)
chr1 (19-79)||(2479128-2479187)
chr1 (18-73)||(9169051-9169106)
chr1 (18-73)||(15313217-15313272)
chr1 (18-73)||(30774059-30774113)
chr1 (19-73)||(13121692-13121745)
chr1 (19-73)||(26843724-26843778)
chr1 (19-73)||(31150533-31150586)
chr1 (19-73)||(32368447-32368501)
chr1 (19-73)||(33562003-33562057)
chr1 (19-73)||(47134639-47134692)
chr1 (19-57)||(29586147-29586185)
chr1 (19-73)||(39826573-39826627)
chr1 (19-57)||(42064425-42064463)
chr1 (19-73)||(44909814-44909867)
chr1 (28-73)||(3270639-3270684)
chr1 (19-73)||(1507852-1507906)
chr1 (19-78)||(2497890-2497949)
chr1 (18-73)||(7024816-7024871)
chr1 (19-78)||(22099697-22099755)
chr1 (19-57)||(17499993-17500031)
chr1 (18-52)||(51423092-51423126)
chr1 (19-71)||(3660920-3660972)
chr1 (28-73)||(46369785-46369830)
chr1 (371-411)||(23205555-23205595)
chr1 (18-73)||(36043408-36043463)
[»] chr3 (37 HSPs)
chr3 (19-79)||(52166218-52166278)
chr3 (19-73)||(8872843-8872897)
chr3 (19-76)||(29081409-29081466)
chr3 (19-80)||(37088247-37088308)
chr3 (19-73)||(26540930-26540984)
chr3 (19-73)||(46972003-46972057)
chr3 (19-73)||(52857866-52857920)
chr3 (19-80)||(41785772-41785833)
chr3 (18-78)||(889678-889737)
chr3 (19-71)||(28677018-28677070)
chr3 (18-73)||(2580054-2580109)
chr3 (19-78)||(16127267-16127326)
chr3 (19-78)||(35499567-35499625)
chr3 (19-78)||(52363007-52363066)
chr3 (19-73)||(25570349-25570403)
chr3 (19-73)||(37528851-37528905)
chr3 (19-73)||(38185741-38185794)
chr3 (19-77)||(40480149-40480207)
chr3 (19-73)||(44545201-44545254)
chr3 (20-78)||(44748915-44748972)
chr3 (19-73)||(50499733-50499786)
chr3 (19-80)||(40563491-40563552)
chr3 (19-79)||(19948446-19948506)
chr3 (19-79)||(45345136-45345195)
chr3 (19-71)||(46248092-46248143)
chr3 (19-69)||(21707125-21707175)
chr3 (19-73)||(44845594-44845648)
chr3 (19-73)||(54672307-54672361)
chr3 (20-73)||(12063857-12063910)
chr3 (28-73)||(48942968-48943013)
chr3 (28-73)||(53779008-53779053)
chr3 (19-71)||(24536817-24536869)
chr3 (19-79)||(29718328-29718388)
chr3 (19-73)||(38892114-38892167)
chr3 (28-73)||(39469890-39469935)
chr3 (28-80)||(4240249-4240300)
chr3 (19-78)||(48378191-48378250)
[»] scaffold0122 (1 HSPs)
scaffold0122 (19-73)||(12840-12894)
[»] chr4 (39 HSPs)
chr4 (19-73)||(28307221-28307275)
chr4 (19-73)||(55764526-55764580)
chr4 (19-73)||(11600649-11600703)
chr4 (19-73)||(35777510-35777564)
chr4 (19-73)||(45780861-45780915)
chr4 (19-73)||(47417599-47417653)
chr4 (19-73)||(55828970-55829024)
chr4 (19-79)||(8829939-8829999)
chr4 (28-79)||(4355718-4355769)
chr4 (19-78)||(18582806-18582864)
chr4 (18-73)||(19514005-19514059)
chr4 (18-73)||(37970261-37970316)
chr4 (19-78)||(42116857-42116916)
chr4 (19-73)||(46895248-46895303)
chr4 (19-73)||(7706338-7706392)
chr4 (19-73)||(9043735-9043788)
chr4 (19-73)||(12234091-12234145)
chr4 (19-73)||(22038481-22038535)
chr4 (18-64)||(35581068-35581114)
chr4 (19-73)||(53273084-53273138)
chr4 (19-73)||(53407156-53407209)
chr4 (19-73)||(55496004-55496058)
chr4 (19-73)||(56372402-56372455)
chr4 (19-79)||(4517315-4517375)
chr4 (19-71)||(25199420-25199472)
chr4 (21-73)||(52669953-52670005)
chr4 (18-73)||(43225801-43225855)
chr4 (19-73)||(4392849-4392903)
chr4 (19-73)||(35822423-35822477)
chr4 (19-76)||(45906102-45906159)
chr4 (19-79)||(37115407-37115466)
chr4 (19-71)||(39087682-39087733)
chr4 (19-58)||(22892509-22892548)
chr4 (19-58)||(22944173-22944212)
chr4 (19-73)||(8941871-8941924)
chr4 (19-73)||(51011190-51011243)
chr4 (19-49)||(52669984-52670014)
chr4 (20-71)||(15635910-15635961)
chr4 (18-50)||(55856647-55856679)
[»] chr2 (36 HSPs)
chr2 (19-77)||(4453643-4453701)
chr2 (19-80)||(5039735-5039796)
chr2 (19-80)||(38579128-38579189)
chr2 (19-79)||(6760724-6760784)
chr2 (19-79)||(16486844-16486903)
chr2 (19-73)||(3377360-3377413)
chr2 (19-73)||(21865213-21865267)
chr2 (19-73)||(44275630-44275684)
chr2 (19-79)||(9886954-9887013)
chr2 (21-73)||(15521439-15521491)
chr2 (19-73)||(2546444-2546498)
chr2 (19-73)||(13111863-13111917)
chr2 (28-73)||(17263875-17263920)
chr2 (28-73)||(24402174-24402219)
chr2 (19-76)||(28382800-28382857)
chr2 (19-76)||(36712656-36712712)
chr2 (23-71)||(4038464-4038511)
chr2 (19-79)||(18212081-18212141)
chr2 (18-61)||(43135597-43135639)
chr2 (19-73)||(650900-650953)
chr2 (19-73)||(8689082-8689135)
chr2 (19-73)||(36999457-36999510)
chr2 (19-73)||(38880903-38880957)
chr2 (19-73)||(40025062-40025116)
chr2 (19-73)||(41796862-41796916)
chr2 (20-73)||(10839701-10839753)
chr2 (19-78)||(26911474-26911533)
chr2 (19-73)||(6153568-6153622)
chr2 (19-73)||(2266272-2266325)
chr2 (19-49)||(15521470-15521500)
chr2 (19-57)||(18710173-18710211)
chr2 (19-57)||(37356151-37356189)
chr2 (19-57)||(41322739-41322777)
chr2 (19-52)||(4385645-4385678)
chr2 (28-69)||(29514812-29514853)
chr2 (28-73)||(43507684-43507729)
[»] scaffold1632 (1 HSPs)
scaffold1632 (19-80)||(160-221)
[»] scaffold0116 (1 HSPs)
scaffold0116 (19-73)||(22564-22618)
[»] scaffold0075 (1 HSPs)
scaffold0075 (19-73)||(27258-27312)
[»] scaffold0031 (1 HSPs)
scaffold0031 (19-78)||(126883-126941)
[»] scaffold0027 (1 HSPs)
scaffold0027 (19-78)||(41868-41926)
[»] scaffold0166 (1 HSPs)
scaffold0166 (19-77)||(36320-36378)
[»] scaffold0197 (1 HSPs)
scaffold0197 (19-73)||(28208-28262)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 132 - 447
Target Start/End: Original strand, 3120574 - 3120894
Alignment:
Q  132 taaaaagtggacaaacatagctaacagattcaatttttgggccaaaaaagagcaatatgcaaaacacatttattcttgttgagtataca-atactcgtcc 230  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||  | ||||||||||    
T  3120574 taaaaagtggacaaacatagctaacagattcaatttttgggctaaaaaagagcaatatgcaaaacacatctattcttgttgagaattgagatactcgtcc 3120673  T
Q  231 atttccatcttgaccaaataactgattttgttttattatttgaccttca------accaccccttcaacttacaatatacatgtccttgtacccaagttt 324  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||      |||||||||| ||||||||||||||||||||||||||||||||||    
T  3120674 atttccatcttgaccaaataactgattttgtcttattatttgaccttcaagttcaaccaccccttgaacttacaatatacatgtccttgtacccaagttt 3120773  T
Q  325 tgcatttttcctcagctagtaaacaaccctatcctattattattattatttagtagtataaatactatcctttgttaaggagaagtctccaaatcaaatc 424  Q
    ||||||| ||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3120774 tgcatttctcctcagctagtatacaaccctatcc---tattattattatttagtagtataaatactatcctttgttaaggagaagtctccaaatcaaatc 3120870  T
Q  425 agcagc-aacagaacatcaatttt 447  Q
    |||| | |||||||||||||||||    
T  3120871 agcaacaaacagaacatcaatttt 3120894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 1893965 - 1894026
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||    
T  1893965 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacagaccctaag 1894026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 17115561 - 17115504
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  17115561 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagagcc 17115504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 31581717 - 31581656
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||||| |||| || | |||||||||||||||||    
T  31581717 cttataagctataagctaaaagctaaaagctcttttttttggataaccaaacagagcctaag 31581656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 23676894 - 23676835
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  23676894 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagacccta 23676835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 17081677 - 17081623
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  17081677 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 17081623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 43276903 - 43276961
Alignment:
Q  21 tataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||| ||| ||||| |||||||||| |||||    
T  43276903 tataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagaccctaa 43276961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 25023329 - 25023268
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| ||||||    
T  25023329 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacagaccctaag 25023268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37560652 - 37560713
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||| ||||||    
T  37560652 cttataagctataagttaagagctaaaagctctttttttgagtttaccaaacagaccctaag 37560713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 31478099 - 31478039
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||  ||| ||||| |||||||||| |||||    
T  31478099 cttataagctataagctaaaagctaaaagctctcttttggggttaaccaaacagaccctaa 31478039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 38171550 - 38171610
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||| ||||||||| |||||    
T  38171550 cttataagctataaactaaaagctaaaagctcttttttggggtttcccaaacagaccctaa 38171610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 32541246 - 32541187
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||  | ||| ||||| |||||||||||||||    
T  32541246 cttataagctataagctaaaagctaaaagctactttttggggttaaccaaacagagccta 32541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 44827440 - 44827499
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||| |||||||||||| |||  |||| |||||||||||||||    
T  44827440 cttataagctataagctaaaaactaaaagctcttttttgaggttaaccaaacagagccta 44827499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 6338341 - 6338287
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  6338341 cttataagctataagctagaagctaaaagctcttttttggggttaaccaaacaga 6338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16422852 - 16422799
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  16422852 cttataggctataagctaaaagctaaaagctctt-ttttgggttaaccaaacaga 16422799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34395471 - 34395525
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| |||  |||||||||||||||    
T  34395471 cttataagctataagttaaaagctaaaagctcttttttaaggtttaccaaacaga 34395525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 39871288 - 39871234
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagag 74  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||    
T  39871288 cttataagctataagctaaaagctaaaagctctt-tttttagtttcccaaacagag 39871234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 40223206 - 40223260
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  40223206 cttataagctataagctaagagctaaaagctctt-ttttgggtgttaccaaacaga 40223260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 10618829 - 10618776
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||    
T  10618829 cttataagctataagctaaaaactaaaagctctt-tttttggtttcccaaacaga 10618776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28709330 - 28709276
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||| || ||| |||||||||    
T  28709330 cttataagctataagttaaaagctaaaagctcttttttgggttttcccaaacaga 28709276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28716687 - 28716633
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||| || ||| |||||||||    
T  28716687 cttataagctataagttaaaagctaaaagctcttttttgggttttcccaaacaga 28716633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 42142858 - 42142912
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| |||  |||| ||||||||||    
T  42142858 cttataagctataagttaaaagctaaaagctcttttttgaggttaaccaaacaga 42142912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 45141578 - 45141631
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||| ||||| |||||| || ||||||||||    
T  45141578 cttataagctataagctaaaagctaaaaactctt-ttttggattaaccaaacaga 45141631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 39702329 - 39702269
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||| |||||| |||| ||||  |||| ||||||||| |||||    
T  39702329 cttataagctataagctaaaagttaaaagttcttttttttagtttcccaaacagaccctaa 39702269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11741216 - 11741275
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||| ||||||||||||||||||| |||  | || |||||||||| ||||    
T  11741216 cttataagctataaactaaaagctaaaagctcttttttgagattaaccaaacagacccta 11741275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 16831558 - 16831503
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||| ||| |||||||| ||||| ||||||  ||||||||||||    
T  16831558 acttataagctataagttaagagctaaaaactctttttttggtgttaccaaacaga 16831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 32099559 - 32099505
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  32099559 cttataagctataagctaagagctataagctctt-ttttgggtgttaccaaacaga 32099505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 37587842 - 37587896
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||    
T  37587842 cttataagctataagctaagagctaaaaactctt-ttttgggtgttaccaaacaga 37587896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 36681570 - 36681608
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  36681570 cttataagctataagctaaaagttaaaagctcttttttt 36681608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 9211010 - 9210958
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||| ||||||    
T  9211010 acttataagctataagctaagaattaaaagctctt-ttttgggtttatcaaaca 9210958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 11298164 - 11298223
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagccta 78  Q
    ||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||| ||||    
T  11298164 cttataagctataagctaagagctataacctctt-ttttgggtgttaccaaacagacccta 11298223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 36590158 - 36590099
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagcctaa 79  Q
    |||||||||||||  ||| |||||||||||||| |||||||| |||||||||||| |||||    
T  36590158 ttataagctataaattaagagctaaaagctctt-ttttgggtgttaccaaacagatcctaa 36590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 31100138 - 31100196
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31100138 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 31100196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 32731782 - 32731724
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  32731782 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagagcct 32731724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 34233038 - 34233096
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  34233038 cttataagctataagctaaaagctaaaagctctttttttgggataaccaaacagagcct 34233096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 30811271 - 30811326
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||    
T  30811271 acttataagctataagctaaaagctaaaaactctttttttgggtttcccaaacaga 30811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14227658 - 14227712
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  14227658 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 14227712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7317733 - 7317794
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||| |||||    
T  7317733 acttataagctataagttaagagctaaaagctctttttttgagtttaccaaacagatcctaa 7317794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 1806438 - 1806491
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  1806438 cttataagctataagctataagctaaaagctctt-ttttgggttaaccaaacaga 1806491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 2442448 - 2442394
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  2442448 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacaga 2442394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12297388 - 12297334
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||    
T  12297388 cttataagctataagctaaaaggtaaaagctcttttttggggttaaccaaacaga 12297334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31452077 - 31452131
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| | ||| |||||||||    
T  31452077 cttataagctataagctaaaagctaaaagctcttttttttgttttcccaaacaga 31452131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34903983 - 34903929
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| | |||| |||||||||    
T  34903983 cttataagctataagctaaaagctaaaagctcttttttggagtttcccaaacaga 34903929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 20805013 - 20804955
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||| ||||    
T  20805013 cttataagctataagctaaaaactaaaagctctt-tttttggtttcccaaacagaaccta 20804955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 34685140 - 34685191
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||||||| |||||    
T  34685140 tataagctataagctaaaagctcttttttggggttaaccaaacagaccctaa 34685191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 43134429 - 43134369
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  43134429 cttataagctataagctaaaagctaaaagctctttttttgggtttaccaaacagaccctaa 43134369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 21741995 - 21741934
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||||| |||||||||||| ||| ||||| |||||||||| ||||||    
T  21741995 cttataagctataagctaaaatctaaaagctcttttttggggttaaccaaacagaccctaag 21741934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 36246507 - 36246567
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||    
T  36246507 cttataagctataagctaaaagctaaaagctact-ttttgggttaaccaaacagagcctaag 36246567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 36407253 - 36407200
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  36407253 acttataagctataagctaagagttaaaagctctttttttgggtttaccaaaca 36407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42375913 - 42375964
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42375913 cttataagctataagctaaaagctaaaagctctt-ttttgggttaaccaaaca 42375964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 47471093 - 47471152
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||    
T  47471093 cttataagctataagctaaaagctaaacgctctt-ttttgggttaaccaaacagaccctaa 47471152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 40637291 - 40637350
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| |||  |||| |||||||||| ||||    
T  40637291 cttataagctataagctaaaagctaaaagctcttttttgaggttaaccaaacagacccta 40637350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 43254127 - 43254068
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| ||||    
T  43254127 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacagacccta 43254068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10312160 - 10312214
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  10312160 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacaga 10312214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 36436178 - 36436124
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  36436178 cttataagatataagctaaaagctaaaagctcttttttggggttaaccaaacaga 36436124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 32168857 - 32168796
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||| |||||||||||||| ||| ||  |||||||||||| ||||||    
T  32168857 cttataagctataagctaagagctaaaagctcttttttgggcgttaccaaacagaccctaag 32168796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 40258881 - 40258821
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagcctaa 79  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| |||||    
T  40258881 cttataagctataagctaagagctaaaagctctt-ttttgggtgttaccaaacagaccctaa 40258821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 34709255 - 34709203
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||||| ||||||    
T  34709255 tataagctaaaagctaaaagctcttttttggggttaaccaaacagaccctaag 34709203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 42587514 - 42587554
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgg 59  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  42587514 cttataagctataagctaaaagctaaaagctctttttttgg 42587554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 9487431 - 9487380
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaac 70  Q
    |||||||||||||||||||||||||||||||||| ||| | ||| |||||||    
T  9487431 cttataagctataagctaaaagctaaaagctcttttttggagttaaccaaac 9487380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 48313553 - 48313608
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||| |||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  48313553 acttataaactataacctaaaagctaaaagctcttttttggggttaaccaaacaga 48313608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 483113 - 483166
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||    
T  483113 cttataagctataagctaagagctaaaagctctt-ttttaagtttaccaaacaga 483166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 44596634 - 44596584
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaa 69  Q
    ||||||| ||||||||||| |||||||||||||| |||| |||||||||||    
T  44596634 cttataaactataagctaagagctaaaagctctttttttaggtttaccaaa 44596584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 45687047 - 45687085
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  45687047 cttataagctataagctaaaagctaaaagctcttttttt 45687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 21374657 - 21374624
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctctt 52  Q
    ||||||||||||||||||||||||||||||||||    
T  21374657 cttataagctataagctaaaagctaaaagctctt 21374624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 47587236 - 47587288
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  47587236 ttataagctataagctaaaagctaaaatctctt-ttttgggtttctcaaacaga 47587288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 21254828 - 21254886
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||| |||||||||||||||||| ||||  ||| |||||||||| ||||    
T  21254828 cttataagctataagttaaaagctaaaagctctt-ttttaagttaaccaaacagacccta 21254886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 48832186 - 48832235
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||| ||||    
T  48832186 tataagctaaaagctaaaagctctt-ttttgggattcccaaacagacccta 48832235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 27089789 - 27089834
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| ||| |||||| |||||||||    
T  27089789 tataagctataagctaaaagctcttttttggggtttcccaaacaga 27089834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 27188512 - 27188467
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| ||| |||||| |||||||||    
T  27188512 tataagctataagctaaaagctcttttttggggtttcccaaacaga 27188467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 1174807 - 1174746
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  1174807 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaacagaccctaag 1174746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2236630 - 2236684
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  2236630 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 2236684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 8024097 - 8024155
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  8024097 acttataagctataagctaaaagctaaaagctctttttttgggataaccaaacagagcc 8024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 1711317 - 1711378
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| ||||||    
T  1711317 cttataagctataagctataagctaaaagctctttttttgggtttcccaaacagaccctaag 1711378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10697292 - 10697240
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  10697292 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaaca 10697240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 12713335 - 12713276
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||    
T  12713335 cttataagctataagctaaaagctaaaagctcttttttggggtttcccaaacagacccta 12713276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 12774599 - 12774540
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||    
T  12774599 cttataagctataagctaaaagctaaaagctcttttttggggtttcccaaacagacccta 12774540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 30412726 - 30412780
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  30412726 cttataagctataagctaaaagctaaaagctttttttttgggtttcccaaacaga 30412780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 30774306 - 30774356
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaa 69  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  30774306 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaa 30774356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 32382872 - 32382818
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  32382872 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 32382818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 35236782 - 35236836
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  35236782 cttataagctataagctaagagctaaaagctcttttttttggtttaccaaacaga 35236836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 4221587 - 4221646
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||    
T  4221587 cttataagctataagctaaaagctaaaagctctt-ttttgagttaaccaaacagaccctaa 4221646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14647471 - 14647529
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||    
T  14647471 cttataagctataagctaaaagctaaaagctctt-ttttaggttaaccaaacagacccta 14647529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 5591611 - 5591558
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  5591611 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacaga 5591558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 13228586 - 13228640
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| | |||| |||||||||    
T  13228586 cttataagctataagctaaaagctaaaagctcttttttggagtttcccaaacaga 13228640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 24793995 - 24793937
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||  | ||| ||||| ||||||||||||||    
T  24793995 cttataagctataagctaaaagctaaaagctactttttggggttaaccaaacagagcct 24793937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 30299721 - 30299667
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| || |||||||    
T  30299721 cttataagctataagctaaaagctaaaaactctttttttgggttaactaaacaga 30299667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 36685839 - 36685785
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  36685839 cttataagctataagttaaaagctaaaagctcttttttggggttaaccaaacaga 36685785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 39744656 - 39744709
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  39744656 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacaga 39744709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 32381788 - 32381840
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  ||||||||    
T  32381788 cttataagctataagctaaaagctaaaagctcttttttggggtcaaccaaaca 32381840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 13156999 - 13157054
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||| |||||||||||||||||| ||| ||||||  ||||||||    
T  13156999 acttataagctataaggtaaaagctaaaagctcttttttggggtttttcaaacaga 13157054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3037539 - 3037593
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||||  |||| |||||||||    
T  3037539 cttataagctataagttaaaagctaaaagctcttttttttagtttcccaaacaga 3037593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19956421 - 19956470
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaa 69  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||||    
T  19956421 cttataagctataagctaaaagctaaaagctctt-ttttaggttaaccaaa 19956470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6604023 - 6604068
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggttt 63  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  6604023 acttataagctataagctaaaagctaaaaactcttttttggggttt 6604068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 19525771 - 19525718
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  19525771 ttataaactataaggtaaaagctaaaagctcttttttagggttaaccaaacaga 19525718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 25872322 - 25872381
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagccta 78  Q
    ||||||||||||||||||  |||||||||||||| |||||||| |||||||||||| ||||    
T  25872322 cttataagctataagctacgagctaaaagctctt-ttttgggtgttaccaaacagacccta 25872381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 32256971 - 32256935
Alignment:
Q  398 gttaaggagaagtctccaaatcaaatcagcagcaaca 434  Q
    |||||||||||||| ||||||||||||||||||||||    
T  32256971 gttaaggagaagtcaccaaatcaaatcagcagcaaca 32256935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 35235843 - 35235895
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||||||||| ||| || ||| ||||||||| ||||||    
T  35235843 tataagctaaaagctaaaagctcttttttgggattttccaaacagaccctaag 35235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 12363727 - 12363785
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||| ||||||||||| || ||| || |||||||||| ||||    
T  12363727 cttataagctataagctaaaagttaaaagctctt-ttctggattaaccaaacagacccta 12363785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 15443480 - 15443425
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| ||||||| ||||| ||||| |||||||||| ||| |||||    
T  15443480 acttataagctataaactaaaagttaaaaactctttttttgggtttcccagacaga 15443425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 2671437 - 2671383
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||| | || ||||  |||| |||||||||    
T  2671437 cttataagctataagctaaaagctaaaagtttttttttttagtttcccaaacaga 2671383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 9587301 - 9587339
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  9587301 cttataagctataagctataagctaaaagctcttttttt 9587339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 11664005 - 11664043
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  11664005 cttataagctataagctaagagctaaaagctcttttttt 11664043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 27130354 - 27130304
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||||||| ||||    
T  27130354 tataagctataagctaaaagctcttttttggggttaaccaaacagacccta 27130304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 29392220 - 29392258
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  29392220 cttataaactataagctaaaagctaaaagctcttttttt 29392258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 9160808 - 9160853
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||| |||||||||||||||||| |||||||||| | |||||||    
T  9160808 tataagttaaaagctaaaagctctttttttgggtttcctaaacaga 9160853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 29704192 - 29704249
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  29704192 cttataagctataagctaaaaattaaaagctcttattttgggtttaccaaacagagcc 29704249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 36301212 - 36301271
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36301212 cttataagctataagctaaaagctaaaagctctt-ttttgggttaaccaaacagagcctaa 36301271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 7711061 - 7711116
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  7711061 acttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 7711116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 19899015 - 19899073
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  19899015 acttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagagcc 19899073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 30721732 - 30721786
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  30721732 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 30721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34319416 - 34319362
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  34319416 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaacaga 34319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 36838803 - 36838857
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  36838803 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 36838857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 17046756 - 17046702
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  17046756 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 17046702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 33524555 - 33524501
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  33524555 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 33524501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 1918052 - 1917992
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||    
T  1918052 cttataagctataagctaaaagctaaaagctact-ttttgggttaaccaaacagagcctaag 1917992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 26204301 - 26204249
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacag 72  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26204301 cttataagctataagctaaaagctaaaagctctt-ttttgggttaaccaaacag 26204249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 2479187 - 2479128
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |||||    
T  2479187 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacagaccctaa 2479128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 9169106 - 9169051
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||    
T  9169106 acttataagctataagctaaaagttaaaagctcttttttggggttaaccaaacaga 9169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 15313272 - 15313217
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||| |||||||||    
T  15313272 acttataagctataagttaaaagctaaaagttctttttttgggtttcccaaacaga 15313217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 30774113 - 30774059
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  30774113 acttataagctataagttaaaagctaaaagctctt-ttttgggttaaccaaacaga 30774059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 13121692 - 13121745
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  13121692 cttataagctataagctaaaagctaaaagctctt-tttggggttaaccaaacaga 13121745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26843778 - 26843724
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||| || |||||| ||| |||||||||    
T  26843778 cttataagctataagctaaaagctaaaagctatttttttggattttccaaacaga 26843724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31150533 - 31150586
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  31150533 cttataagctataagctaaaagctaaaagct-tttttttgggtttcccaaacaga 31150586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 32368447 - 32368501
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||    
T  32368447 cttataagctataagctaaaagttaaaagctcttttttagggttaaccaaacaga 32368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 33562003 - 33562057
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  33562003 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacaga 33562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 47134639 - 47134692
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  47134639 cttataagctataaggtaaaagctaaaagctctt-ttttgggttaaccaaacaga 47134692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 29586185 - 29586147
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  29586185 cttataagctataagctaaaagctaaaagctcttttttt 29586147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 39826627 - 39826573
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| | | ||||| ||||| ||||    
T  39826627 cttataagctataagctaaaagctaaaagctcttttatggggttaaccaatcaga 39826573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 42064425 - 42064463
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  42064425 cttataagctataagctaaaagctaaaagctcttttttt 42064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 44909867 - 44909814
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  44909867 cttataagctataagttaaaagctaaaagctctt-tttggggttaaccaaacaga 44909814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 3270684 - 3270639
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||    
T  3270684 tataagctataagctaaaagctctttttttgggtttcccaaacaga 3270639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 1507852 - 1507906
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||    
T  1507852 cttataagctataagctaagagctaaaaactctt-ttttgggtgttaccaaacaga 1507906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 2497949 - 2497890
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||| || ||||||| ||||    
T  2497949 cttataaactataagctaaaagctaaaagctctattttagggttaactaaacagacccta 2497890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 7024871 - 7024816
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||  ||||||||||||    
T  7024871 acttataagctatatgctaagagctaaaagctcttttttaggtgttaccaaacaga 7024816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 22099697 - 22099755
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||    
T  22099697 cttataagctataagctaaaa-ctaaaagctcttttttttagtttcccaaacagacccta 22099755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 17499993 - 17500031
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  17499993 cttataagctataaactaaaagctaaaagctcttttttt 17500031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 51423092 - 51423126
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctctt 52  Q
    ||||||||||||||||||||||| |||||||||||    
T  51423092 acttataagctataagctaaaagttaaaagctctt 51423126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3660972 - 3660920
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaaca 71  Q
    ||||||||||||||||||| | |||||||||||| |||||||| ||||||||||    
T  3660972 cttataagctataagctaagaactaaaagctctt-ttttgggtgttaccaaaca 3660920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 46369830 - 46369785
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| ||| |||||| |||||||||    
T  46369830 tataagctataagctaaaagctcttttttggggtttcccaaacaga 46369785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 23205595 - 23205555
Alignment:
Q  371 tatttagtagtataaatactatcctttgttaaggagaagtc 411  Q
    |||||||||||||| |||||||  |||||||||||||||||    
T  23205595 tatttagtagtatatatactattgtttgttaaggagaagtc 23205555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 36043408 - 36043463
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||| |||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  36043408 acttatatgctataagctaagagctataagctctt-ttttgggtgttaccaaacaga 36043463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 52166218 - 52166278
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||    
T  52166218 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaacagaccctaa 52166278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8872897 - 8872843
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  8872897 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 8872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 29081409 - 29081466
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  29081409 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagagcc 29081466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 37088308 - 37088247
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||    
T  37088308 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaaaagaccctaag 37088247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26540984 - 26540930
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  26540984 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 26540930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 46972057 - 46972003
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  46972057 cttataagctataagctaagagctaaaagctctttttttgagtttaccaaacaga 46972003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 52857920 - 52857866
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  52857920 cttataagctataaactaagagctaaaagctctttttttgggtttaccaaacaga 52857866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41785833 - 41785772
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| |||||||||| ||||||    
T  41785833 cttataagctataagttaaaagctaaaagctcttttttggggttaaccaaacagaccctaag 41785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 889737 - 889678
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  889737 acttataagctataagctaaaagctaaaagctctt-tttagggttaaccaaacagacccta 889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28677018 - 28677070
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  28677018 cttataagctataagctaaaagctaaaagctcttttttagggtttcccaaaca 28677070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 2580054 - 2580109
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  2580054 acttataagctataaactaaaagctaaaagctcttttttagggttaaccaaacaga 2580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 16127267 - 16127326
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||| ||||    
T  16127267 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaatcagacccta 16127326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 35499625 - 35499567
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||||||||||||| || |||||||||| ||||||||| ||||    
T  35499625 cttataagctataagctaaaagctaaaagct-tttttttgggtttcccaaacagacccta 35499567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 52363066 - 52363007
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| ||||||||| ||||    
T  52363066 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacagacccta 52363007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 25570403 - 25570349
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  25570403 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacaga 25570349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 37528851 - 37528905
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||| |||||||| || |||||||||| |||||||||    
T  37528851 cttataagctataagctaaaagttaaaagctttttttttgggtttcccaaacaga 37528905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 38185794 - 38185741
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  38185794 cttataagctataagctaaaagctaaaagctctt-ttttaggttaaccaaacaga 38185741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 40480149 - 40480207
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||| | |||  ||| |||||||||||||||    
T  40480149 cttataagctataagctaaaagctaaaagctcatttttgaggtgtaccaaacagagcct 40480207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 44545254 - 44545201
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  44545254 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacaga 44545201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 44748915 - 44748972
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  44748915 ttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacagacccta 44748972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 50499786 - 50499733
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  50499786 cttataaactataagctaaaagctaaaagctctt-ttttgggttaaccaaacaga 50499733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 40563491 - 40563552
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||  | ||| ||| | |||||||||||||||||    
T  40563491 cttataagctataagctaaaagctaaaagctactttttggggataaccaaacagagcctaag 40563552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 19948446 - 19948506
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||| |||||||||| ||||||||||||||| ||| ||||| |||||||||| |||||    
T  19948446 cttataaactataagctagaagctaaaagctcttttttggggttaaccaaacagaccctaa 19948506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 45345136 - 45345195
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||    
T  45345136 cttataagctataagctaaaagctaaaaactctt-tttttggtttcccaaacagaccctaa 45345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 46248092 - 46248143
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  46248092 cttataagctataagctaaaaactaaaagctctt-ttttgggtttcccaaaca 46248143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 21707175 - 21707125
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaa 69  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  21707175 cttataagctataagttaaaagctaaaagctcttttttggggttaaccaaa 21707125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 44845648 - 44845594
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||| ||||| |||  |||| ||||||||||    
T  44845648 cttataagctataagctaaaagctaaaaactcttttttgaggttaaccaaacaga 44845594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 54672307 - 54672361
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||| ||||||||||||||||||| ||||  |||| |||||||||    
T  54672307 cttataagctataaactaaaagctaaaagctcttttttttagtttcccaaacaga 54672361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12063857 - 12063910
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||| |||| |||||||||||||| ||| | ||||||||||||||    
T  12063857 ttataagctataaactaagagctaaaagctcttttttggagtttaccaaacaga 12063910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 48943013 - 48942968
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||    
T  48943013 tataagctataagctaaaagctctttttttgggtttcccaaacaga 48942968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 53779053 - 53779008
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||    
T  53779053 tataagctaaaagctaaaagctctttttttaggtttcccaaacaga 53779008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 24536817 - 24536869
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    ||||||||||||||||||| |||||||||||||| ||| | |||| |||||||    
T  24536817 cttataagctataagctaagagctaaaagctcttttttggagtttcccaaaca 24536869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 29718328 - 29718388
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||| |||||| ||||||||| || |||| ||||| ||||||||| |||||    
T  29718328 cttataagctataaactaaaaactaaaagcttttttttttggtttcccaaacagaccctaa 29718388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38892114 - 38892167
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||| |||||||||||||||||||||||||| |||| | || ||||||||||    
T  38892114 cttataaactataagctaaaagctaaaagctctt-ttttagattaaccaaacaga 38892167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 39469935 - 39469890
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  39469935 tataagctataagctaaaagctcttttttagggttaaccaaacaga 39469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 4240300 - 4240249
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||| || ||||||||||||||| |||||||||| ||||||||| ||||||    
T  4240300 tataagttataagctaaaagctctt-ttttgggtttcccaaacagaccctaag 4240249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48378250 - 48378191
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagccta 78  Q
    ||||||||||||||||||| || ||||||||||| |||||||| |||||||| ||| ||||    
T  48378250 cttataagctataagctaagaggtaaaagctctt-ttttgggtgttaccaaagagacccta 48378191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 12840 - 12894
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  12840 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 12894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28307275 - 28307221
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28307275 cttataagctataagctaaaagctaaaagctctttttttgggtttcccaaacaga 28307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 55764580 - 55764526
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  55764580 cttataagctataagctaagagctaaaagctctttttttgggtttaccaaacaga 55764526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11600703 - 11600649
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  11600703 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 11600649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 35777510 - 35777564
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  35777510 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 35777564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 45780861 - 45780915
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  45780861 cttataagctataagctaaaagctaaaagctcttttttagggttaaccaaacaga 45780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 47417599 - 47417653
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  47417599 cttataagctataagctaaaagctaaaagctcttttttggggtttcccaaacaga 47417653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 55829024 - 55828970
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  55829024 cttataagctataagctaagagctaaaagctctttttttgggtttaccgaacaga 55828970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 8829939 - 8829999
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||    
T  8829939 cttataagctataagctaaaaactaaaagctcttttttggggtttcccaaacagaccctaa 8829999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 4355718 - 4355769
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  4355718 tataagctataagctaaaagctctttttttgggtttaccaaacagaccctaa 4355769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 18582864 - 18582806
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  18582864 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacagacccta 18582806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 19514005 - 19514059
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  19514005 acttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacaga 19514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 37970316 - 37970261
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||| |||||||||||| | |||| |||||||||||||||    
T  37970316 acttataagctataagctaagagctaaaagctcatttttttggtttaccaaacaga 37970261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 42116916 - 42116857
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| |||  ||||| ||||||||| ||||    
T  42116916 cttataagctataagctaaaagctaaaagctcttttttgaggtttcccaaacagacccta 42116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 46895303 - 46895248
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctc-ttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  46895303 cttataagctataagctaaaagctaaaagctcttttttttgggtttcccaaacaga 46895248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 7706392 - 7706338
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| | |||| ||| |||||||||    
T  7706392 cttataagctataagctaaaagctaaaagctcttttcttggttttcccaaacaga 7706338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 9043735 - 9043788
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  9043735 cttataagctataagctaaaagctaaaagctctt-ttttgagtttcccaaacaga 9043788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 12234091 - 12234145
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  12234091 cttataagctataagttaaaagctaaaagctcttttttggggttaaccaaacaga 12234145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 22038481 - 22038535
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| | | ||||| ||||||||||    
T  22038481 cttataagctataagctaaaagctaaaagctcttttatggggttaaccaaacaga 22038535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 35581068 - 35581114
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggttta 64  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  35581068 acttataagctataagctaaaagttaaaagctctttttttgggttta 35581114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 53273138 - 53273084
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||  |||| ||||||||||    
T  53273138 cttataagctataagctaaaagctaaaagctcttttttgaggttaaccaaacaga 53273084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 53407209 - 53407156
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  53407209 cttataagctataagctaaaagctaaaagctctt-tttggggttaaccaaacaga 53407156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 55496004 - 55496058
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||  |||| |||||||||    
T  55496004 cttataagctataagctaaaagctaaaagctcttttttttagtttcccaaacaga 55496058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 56372455 - 56372402
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||    
T  56372455 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacaga 56372402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 4517315 - 4517375
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||| |||||||||||||||||| ||| || || |||||||||| |||||    
T  4517315 cttataagctataagttaaaagctaaaagctcttttttgggattaaccaaacagaccctaa 4517375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 25199420 - 25199472
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    ||||||| |||||||||||||||||||||||||| ||| ||||| ||||||||    
T  25199420 cttataaactataagctaaaagctaaaagctcttttttggggttaaccaaaca 25199472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 52670005 - 52669953
Alignment:
Q  21 tataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| |||||||||||||||||||||| |||||| ||| |||||||||    
T  52670005 tataagctaaaagctaaaagctaaaagctctttttttggatttcccaaacaga 52669953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 43225801 - 43225855
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||| |||||||||||| |||| ||||| |||||||||    
T  43225801 acttataagctataagctaaaaactaaaagctctt-tttttggtttcccaaacaga 43225855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 4392849 - 4392903
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||| |||||||||||| |||  |||| ||||||||||    
T  4392849 cttataagctataagctaaaaactaaaagctcttttttgaggttaaccaaacaga 4392903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 35822423 - 35822477
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||| ||||||||||||||||||||||||| |||  |||| ||||||||||    
T  35822423 cttataagttataagctaaaagctaaaagctcttttttgaggttaaccaaacaga 35822477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 45906159 - 45906102
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||| ||||||||  | ||| ||||| |||||||||||||    
T  45906159 cttataagctataagctaaaaggtaaaagctactttttggggttaaccaaacagagcc 45906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 37115407 - 37115466
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||| ||||||||||||||||||||| ||||| |||| ||||| ||||||||| |||||    
T  37115407 cttatatgctataagctaaaagctaaaaactctt-tttttggtttcccaaacagaccctaa 37115466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 39087682 - 39087733
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  39087682 cttataagctataagctagaagctaaaagctctt-ttttaggttaaccaaaca 39087733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 22892548 - 22892509
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttg 58  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  22892548 cttataagctataagctaagagctaaaagctctttttttg 22892509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 22944212 - 22944173
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttg 58  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  22944212 cttataagctataagctaagagctaaaagctctttttttg 22944173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8941924 - 8941871
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||| |||||| ||||||||||| |||| ||||| |||||||||    
T  8941924 cttataagctataagttaaaagttaaaagctctt-tttttggtttcccaaacaga 8941871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 51011190 - 51011243
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||| ||||||||| ||||||||||||||| ||||| ||| ||||||||||    
T  51011190 cttataagttataagctagaagctaaaagctctt-ttttgagttaaccaaacaga 51011243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 52670014 - 52669984
Alignment:
Q  19 cttataagctataagctaaaagctaaaagct 49  Q
    |||||||||||||||||||||||||||||||    
T  52670014 cttataagctataagctaaaagctaaaagct 52669984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 15635961 - 15635910
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaaca 71  Q
    |||||||||||||||||| || ||||||||||| |||||||| ||||||||||    
T  15635961 ttataagctataagctaagaggtaaaagctctt-ttttgggtgttaccaaaca 15635910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 55856647 - 55856679
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctc 50  Q
    ||||||||||||||||||||||| |||||||||    
T  55856647 acttataagctataagctaaaagttaaaagctc 55856679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 4453643 - 4453701
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  4453643 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacagagcct 4453701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 5039796 - 5039735
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||||    
T  5039796 cttataagctataagctaaaagctaaaagctcttttttggggtttcccaaacagaccctaag 5039735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 38579128 - 38579189
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||    
T  38579128 cttataagctataagctaaaagctaaaagttcttttttagggttaaccaaacagagcctaag 38579189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 6760724 - 6760784
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||    
T  6760724 cttataagctataagctaagagctaaaagctctttttttgagtttaccaaacagaccctaa 6760784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 16486903 - 16486844
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  16486903 cttataagctataagctaaaagctaaaagctctt-ttttgggttaaccaaacagaccctaa 16486844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 3377413 - 3377360
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  3377413 cttataagctataagctaaaagctaaaagctctt-ttttgggttaaccaaacaga 3377360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21865267 - 21865213
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  21865267 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 21865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 44275684 - 44275630
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  44275684 cttataagctataagctaagagctaaaagctctttttttaggtttaccaaacaga 44275630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 9887013 - 9886954
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||    
T  9887013 cttataagctataagctaaaagctaaaagctctt-ttttaggttaaccaaacagaccctaa 9886954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15521491 - 15521439
Alignment:
Q  21 tataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  15521491 tataagctaaaagctaaaagctaaaagctctttttttgggttttccaaacaga 15521439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2546444 - 2546498
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||  ||||||||    
T  2546444 cttataagctataagctaaaagctaaaagctcttttttggggtttctcaaacaga 2546498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 13111863 - 13111917
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||||||||| || ||| |||||| |||||||||    
T  13111863 cttataagctataagctaaaagctaaaagctattttttggggtttcccaaacaga 13111917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 17263875 - 17263920
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  17263875 tataagctaaaagctaaaagctctttttttgggttttccaaacaga 17263920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 24402174 - 24402219
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  24402174 tataagctaaaagctaaaagctctttttttgggtttcccaaacaga 24402219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 28382800 - 28382857
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||||||||||||  | ||| ||||| |||||||||||||    
T  28382800 cttataagctataagctaaaagctaaaagctactttttggggttaaccaaacagagcc 28382857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 36712656 - 36712712
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcc 76  Q
    |||||||||||||||||||||||||||||||||| |||| || | |||||||||||||    
T  36712656 cttataagctataagctaaaagctaaaagctctt-tttttggataaccaaacagagcc 36712712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 4038464 - 4038511
Alignment:
Q  23 taagctataagctaaaagctaaaagctcttattttgggtttaccaaaca 71  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  4038464 taagctataagctaaaagctaaaagctctt-ttttgggttaaccaaaca 4038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 18212141 - 18212081
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaa 79  Q
    ||||||||||||||| |||||||||||||||| | ||| ||||| |||||||||| |||||    
T  18212141 cttataagctataaggtaaaagctaaaagctcctttttggggttaaccaaacagaccctaa 18212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 43135639 - 43135597
Alignment:
Q  18 acttataagctataagctaaaagctaaaagctcttattttgggt 61  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  43135639 acttataagctataagctaaaagctaaaagctctt-ttttgggt 43135597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 650900 - 650953
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||    
T  650900 cttataagctataagctaaa-gctaaaagctcttttttggggttaaccaaacaga 650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 8689082 - 8689135
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||| ||||||||||    
T  8689082 cttataagctataaactaaaagctaaaagctctt-tttggggttaaccaaacaga 8689135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 36999510 - 36999457
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||    
T  36999510 cttataagctataaactaaaagctaaaagctctt-tttttggtttcccaaacaga 36999457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38880903 - 38880957
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||||||||||||| || ||||||||||| |||||  |||||||||||||    
T  38880903 cttataagctataagctaagagttaaaagctctttttttgaatttaccaaacaga 38880957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 40025062 - 40025116
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||| |||||||||    
T  40025062 cttatatgctataagctaaaagctaaaagctcttttttggagtttcccaaacaga 40025116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41796862 - 41796916
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||| ||||||||||| |||||||||||||| || | |||||||||||||||    
T  41796862 cttataaactataagctaagagctaaaagctctttttattggtttaccaaacaga 41796916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10839701 - 10839753
Alignment:
Q  20 ttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||| |||| |||| ||||| |||||||||    
T  10839701 ttataagctataagctaaaagctaaaagttctt-tttttggtttcccaaacaga 10839753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 26911533 - 26911474
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacagagccta 78  Q
    ||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||| ||||    
T  26911533 cttataagctataagttaagagctaaaagctctt-ttttgggtgttaccaaacagacccta 26911474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6153568 - 6153622
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||    
T  6153568 cttataagctataagctaagagctaaaagctctt-ttttggatgttaccaaacaga 6153622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 2266272 - 2266325
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||| ||||||||||||||||||||| | || |||||||||| |||||||||    
T  2266272 cttataaactataagctaaaagctaaaag-tttttttttgggtttcccaaacaga 2266325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 15521500 - 15521470
Alignment:
Q  19 cttataagctataagctaaaagctaaaagct 49  Q
    |||||||||||||||||||||||||||||||    
T  15521500 cttataagctataagctaaaagctaaaagct 15521470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 18710211 - 18710173
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  18710211 cttataagctataagttaaaagctaaaagctcttttttt 18710173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 37356189 - 37356151
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  37356189 cttataagctataagctaaaagctaaaaactcttttttt 37356151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 41322777 - 41322739
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttatttt 57  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  41322777 cttataagctataagataaaagctaaaagctcttttttt 41322739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 4385645 - 4385678
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctctt 52  Q
    ||||||||||||||||||| ||||||||||||||    
T  4385645 cttataagctataagctaagagctaaaagctctt 4385678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 29514853 - 29514812
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaa 69  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||    
T  29514853 tataagctaaaagctaaaagctcttttttggggttaaccaaa 29514812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 43507684 - 43507729
Alignment:
Q  28 tataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    ||||||||| ||||||||||||||| ||| |||||| |||||||||    
T  43507684 tataagctataagctaaaagctcttttttagggtttcccaaacaga 43507729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1632 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 160 - 221
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcctaag 80  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||    
T  160 cttataagctataagctaagagctaaaagctctttttttgagtttaccaaacagaccctaag 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 22618 - 22564
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  22618 cttataagctataagctaaaagctaaaagctcttttttcgggttaaccaaacaga 22564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 27258 - 27312
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacaga 73  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  27258 cttataagctataagctaaaagctaaaagctcttttttggggttaaccaaacaga 27312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 126883 - 126941
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||||    
T  126883 cttataagctataagctaaaagctaaaagctctt-tcttgggttaaccaaacagacccta 126941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41868 - 41926
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagccta 78  Q
    |||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| ||||    
T  41868 cttataagctataagctaaaagctaaaagctctt-tttttggtttcccaaacagacccta 41926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 36378 - 36320
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggtttaccaaacagagcct 77  Q
    |||||||||||||||||||||||||||||||  | ||| ||||| ||||||||||||||    
T  36378 cttataagctataagctaaaagctaaaagctactttttggggttaaccaaacagagcct 36320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 28208 - 28262
Alignment:
Q  19 cttataagctataagctaaaagctaaaagctcttattttgggt-ttaccaaacaga 73  Q
    ||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||    
T  28208 cttataagctataagctaagagctaaaagctctt-ttttgagtgttaccaaacaga 28262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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