View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15358_high_7 (Length: 243)
Name: NF15358_high_7
Description: NF15358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15358_high_7 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 6179444 - 6179225
Alignment:
| Q |
1 |
ttgaaggtgagtagtatctataggacaaacaattcaagttgggaccatgaagggttgttaataattgacgtagagtttgttgaacaaaggtgcaagtaac |
100 |
Q |
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| T |
6179444 |
ttgaaggtgactagtatctataggacaaacaattcaagttgggaccatgaaggattgttaataattgacgtagagtttgttgaacaaaggtgcaagtcac |
6179345 |
T |
|
| Q |
101 |
aattattgtgtgaagaatttatgatcacaaccatgtggtgaaaatggtcaaacactcactcatttagtaaaaaggacagacataataggactaatgtttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6179344 |
aattattgtgtgaagaatttatgatcacaaccatgtggtgaaaatggtcaaacactcactcatatagtaaaaaggacagacataataggactaatgtttg |
6179245 |
T |
|
| Q |
201 |
tttctgttcagtttttaatt |
220 |
Q |
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|||||||||||||||||||| |
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| T |
6179244 |
tttctgttcagtttttaatt |
6179225 |
T |
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