View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15359_high_3 (Length: 358)
Name: NF15359_high_3
Description: NF15359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15359_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 328
Target Start/End: Original strand, 28609664 - 28609991
Alignment:
| Q |
1 |
atcataaagacccatctctgcatatccagatatcaaggaattccacggaaacgcatacatatccctcttagtcatttgatcaaacaagtcatgtgcatca |
100 |
Q |
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| T |
28609664 |
atcataaagacccatctctgcatatccagatatcaacgaattccacggaaacgcatacatatccctcttagtcatttgatcaaacaagtcatgtgcatca |
28609763 |
T |
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| Q |
101 |
tccatatacccaaatgaagcatacaacctaacaagtttagaacttattccaacatttctatgcaaaagggctggtgggataagacggtgaagccggatac |
200 |
Q |
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| T |
28609764 |
tccatatacccaaatgaagcatacaacctaacaagtttagaacttattccaacatttctatgcaaaagggctggtgggataagacggtgaagccagatac |
28609863 |
T |
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| Q |
201 |
catgatgaatagctccgaaacggtaacaagtttctaacaaagaagcataaatttcagggtcaattttgatgcctttctccaatgaagcttcaaggtcatt |
300 |
Q |
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| T |
28609864 |
cgtgatgaatagctccgaaacggtaacaagtttctaacaaagaagcataaatttcagggtcaattttgatgcctttctccaatgaagcttcaaggtcatt |
28609963 |
T |
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| Q |
301 |
gagaacttgttcaagtgcttgaaatttg |
328 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
28609964 |
gagaacttgttcaagtgcttgaaatttg |
28609991 |
T |
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