View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15360_high_15 (Length: 404)
Name: NF15360_high_15
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15360_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 1 - 393
Target Start/End: Original strand, 48965360 - 48965752
Alignment:
| Q |
1 |
tacaatgcagggctcttgatgtactatgatgtcttgctaaacaaccatactagctgttcatttagactcaattgatttaacatctcatattttgaaatga |
100 |
Q |
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| T |
48965360 |
tacaatgcagggctcttgatgtactatgatgtcttgctaaacaaccatactagctgttcatttagactcaattgatttaacatctcatattttgaaatga |
48965459 |
T |
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| Q |
101 |
atgttataaagattattcattatcttacacatcgtgctaaacagaatgagtttgttgtctagggccttcttctgttaattgttatagatatggcacaatt |
200 |
Q |
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| T |
48965460 |
atgttataaagattattcattatcttacacatcgtgctaaacagaatgagtttgttgtctagggccttcttctgttcattgttatagatatggcacaatt |
48965559 |
T |
|
| Q |
201 |
gataataaacggacgattggccaaaaagataatttgaatcaaagaaccaccagcttcctcaactaagttcctaaggtcagtttcatcttccaaaccaaag |
300 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
48965560 |
gataataaaccgacgattggccaaaaagataatttgaatcaaagaaccaccagcttcctcaactaagttcctaaggtcagtttcatcttccaaaccatag |
48965659 |
T |
|
| Q |
301 |
taatctatccttaagctacggtcaccatccgagggaacacaccacacatgtgatctgacctttctacattttctgattcactacagatgatgt |
393 |
Q |
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|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
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| T |
48965660 |
taatatatccttaagctacggtcaccatccgagggaacaaaccacacatgtgatctgacctttctacattttctgattaactacatatgatgt |
48965752 |
T |
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