View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15360_high_2 (Length: 739)

Name: NF15360_high_2
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15360_high_2
NF15360_high_2
[»] chr5 (39 HSPs)
chr5 (16-659)||(22876710-22877356)
chr5 (664-739)||(13038581-13038657)
chr5 (664-739)||(33709628-33709703)
chr5 (664-739)||(1827657-1827733)
chr5 (664-739)||(11926629-11926705)
chr5 (664-739)||(22392695-22392771)
chr5 (664-736)||(25586926-25586999)
chr5 (664-736)||(6014410-6014482)
chr5 (664-739)||(13108576-13108652)
chr5 (664-739)||(15641232-15641308)
chr5 (664-739)||(27498858-27498934)
chr5 (664-739)||(37495044-37495117)
chr5 (664-738)||(32059568-32059643)
chr5 (673-739)||(8484788-8484854)
chr5 (673-739)||(38631088-38631154)
chr5 (670-739)||(31288073-31288142)
chr5 (664-739)||(34310136-34310212)
chr5 (673-736)||(15971252-15971315)
chr5 (688-739)||(18207226-18207277)
chr5 (664-738)||(34049816-34049891)
chr5 (665-739)||(36954813-36954888)
chr5 (673-731)||(27487690-27487748)
chr5 (673-739)||(38684212-38684278)
chr5 (675-736)||(42193491-42193552)
chr5 (664-739)||(15931053-15931129)
chr5 (662-739)||(7085753-7085831)
chr5 (663-736)||(23270652-23270726)
chr5 (664-737)||(30485822-30485896)
chr5 (673-738)||(4603781-4603846)
chr5 (686-739)||(12398575-12398628)
chr5 (686-735)||(19456340-19456389)
chr5 (673-720)||(3715055-3715102)
chr5 (673-727)||(25750750-25750804)
chr5 (664-736)||(5067295-5067368)
chr5 (684-738)||(10869693-10869747)
chr5 (663-736)||(12317280-12317354)
chr5 (681-739)||(37397725-37397783)
chr5 (686-739)||(7151346-7151399)
chr5 (664-736)||(11465037-11465110)
[»] chr8 (33 HSPs)
chr8 (661-739)||(18532102-18532181)
chr8 (664-739)||(34237782-34237858)
chr8 (673-739)||(27746462-27746528)
chr8 (673-739)||(28193482-28193548)
chr8 (664-739)||(3734750-3734826)
chr8 (667-739)||(4698850-4698922)
chr8 (664-739)||(4718643-4718719)
chr8 (664-739)||(39349254-39349330)
chr8 (665-739)||(19471608-19471683)
chr8 (665-739)||(19542532-19542607)
chr8 (665-739)||(19590089-19590164)
chr8 (681-739)||(15259533-15259591)
chr8 (663-739)||(2618183-2618260)
chr8 (687-739)||(2166721-2166773)
chr8 (664-739)||(42643245-42643321)
chr8 (680-739)||(21603245-21603304)
chr8 (686-739)||(14632975-14633028)
chr8 (675-739)||(264526-264590)
chr8 (675-739)||(651331-651395)
chr8 (675-739)||(837066-837130)
chr8 (664-738)||(20305906-20305981)
chr8 (688-739)||(20469940-20469991)
chr8 (664-738)||(21092539-21092614)
chr8 (673-735)||(8042662-8042724)
chr8 (664-739)||(32879277-32879353)
chr8 (673-736)||(24018390-24018453)
chr8 (665-739)||(42328004-42328078)
chr8 (663-736)||(7558073-7558147)
chr8 (671-739)||(8765653-8765721)
chr8 (675-739)||(11714946-11715010)
chr8 (684-739)||(22200687-22200742)
chr8 (664-738)||(26168976-26169051)
chr8 (673-739)||(28088294-28088360)
[»] chr7 (43 HSPs)
chr7 (665-739)||(7799959-7800034)
chr7 (661-739)||(40543037-40543116)
chr7 (664-739)||(7175989-7176065)
chr7 (664-739)||(7275275-7275351)
chr7 (664-739)||(21217960-21218036)
chr7 (665-739)||(2103054-2103129)
chr7 (673-739)||(21835159-21835225)
chr7 (673-739)||(22119896-22119962)
chr7 (664-737)||(23854394-23854468)
chr7 (664-739)||(2751269-2751345)
chr7 (664-739)||(10091186-10091262)
chr7 (664-739)||(18044105-18044181)
chr7 (664-735)||(25333417-25333489)
chr7 (682-739)||(22703503-22703560)
chr7 (664-739)||(11997847-11997923)
chr7 (665-736)||(19421230-19421302)
chr7 (664-739)||(21370595-21370671)
chr7 (680-739)||(22299864-22299923)
chr7 (663-729)||(31713032-31713099)
chr7 (673-739)||(13332550-13332616)
chr7 (664-737)||(17212051-17212125)
chr7 (673-739)||(23012635-23012701)
chr7 (673-739)||(27312160-27312226)
chr7 (674-736)||(42913643-42913705)
chr7 (663-738)||(2344296-2344372)
chr7 (664-739)||(17197077-17197153)
chr7 (664-735)||(27009357-27009429)
chr7 (664-739)||(39145779-39145855)
chr7 (665-739)||(21574230-21574305)
chr7 (673-735)||(28089824-28089886)
chr7 (664-739)||(32849589-32849665)
chr7 (664-739)||(43785426-43785502)
chr7 (684-739)||(14199793-14199848)
chr7 (663-737)||(31197588-31197663)
chr7 (673-731)||(28003844-28003902)
chr7 (663-739)||(28950866-28950945)
chr7 (673-739)||(22696328-22696394)
chr7 (673-739)||(28646977-28647043)
chr7 (693-739)||(31273942-31273988)
chr7 (674-739)||(9718114-9718179)
chr7 (683-736)||(27704020-27704073)
chr7 (664-736)||(40332097-40332170)
chr7 (682-739)||(42814881-42814938)
[»] chr3 (45 HSPs)
chr3 (664-739)||(15566626-15566701)
chr3 (663-739)||(45529881-45529958)
chr3 (664-739)||(30807280-30807356)
chr3 (664-739)||(35492905-35492981)
chr3 (664-739)||(40133576-40133652)
chr3 (664-739)||(46576342-46576418)
chr3 (673-739)||(53424303-53424369)
chr3 (673-738)||(25379765-25379830)
chr3 (663-739)||(30257617-30257694)
chr3 (664-739)||(8456277-8456353)
chr3 (664-739)||(21362937-21363013)
chr3 (664-739)||(25289841-25289917)
chr3 (664-739)||(34492702-34492778)
chr3 (664-739)||(40940819-40940895)
chr3 (680-739)||(26108303-26108362)
chr3 (663-737)||(51532782-51532857)
chr3 (665-739)||(52455776-52455851)
chr3 (675-736)||(26174119-26174180)
chr3 (664-736)||(29915399-29915472)
chr3 (664-736)||(29964552-29964625)
chr3 (663-739)||(19857046-19857121)
chr3 (663-738)||(48977381-48977457)
chr3 (664-739)||(49258389-49258465)
chr3 (675-739)||(52821762-52821826)
chr3 (681-739)||(9853628-9853686)
chr3 (664-739)||(7485652-7485728)
chr3 (664-739)||(31537965-31538041)
chr3 (664-739)||(45272543-45272619)
chr3 (681-737)||(53234039-53234095)
chr3 (663-736)||(50582985-50583059)
chr3 (663-739)||(18177014-18177091)
chr3 (664-737)||(32151419-32151492)
chr3 (670-739)||(53288839-53288908)
chr3 (664-739)||(7470342-7470418)
chr3 (664-739)||(9842915-9842990)
chr3 (673-737)||(36660774-36660838)
chr3 (673-739)||(25344184-25344250)
chr3 (701-738)||(1692866-1692903)
chr3 (686-739)||(10083946-10083999)
chr3 (686-739)||(10190869-10190922)
chr3 (674-739)||(55371412-55371477)
chr3 (693-737)||(39041981-39042025)
chr3 (664-739)||(55287797-55287873)
chr3 (685-736)||(14343418-14343469)
chr3 (673-739)||(4462637-4462703)
[»] chr6 (27 HSPs)
chr6 (662-739)||(9238967-9239045)
chr6 (664-739)||(5360198-5360274)
chr6 (673-737)||(11448875-11448939)
chr6 (664-739)||(12591631-12591707)
chr6 (664-739)||(15360225-15360301)
chr6 (664-739)||(22576061-22576137)
chr6 (673-736)||(9690768-9690831)
chr6 (664-737)||(11007159-11007233)
chr6 (664-737)||(33718587-33718661)
chr6 (661-737)||(13753231-13753308)
chr6 (664-739)||(654273-654349)
chr6 (668-739)||(14212890-14212962)
chr6 (664-739)||(21148637-21148713)
chr6 (664-739)||(34147340-34147416)
chr6 (664-739)||(34159956-34160032)
chr6 (673-739)||(1344941-1345005)
chr6 (673-739)||(21982447-21982513)
chr6 (664-739)||(3222762-3222837)
chr6 (681-734)||(9843950-9844003)
chr6 (664-739)||(9208246-9208322)
chr6 (664-739)||(28672061-28672137)
chr6 (683-739)||(11840915-11840971)
chr6 (686-737)||(28968171-28968222)
chr6 (681-739)||(17081181-17081239)
chr6 (685-739)||(17149583-17149637)
chr6 (684-738)||(17706435-17706489)
chr6 (664-732)||(33499468-33499537)
[»] chr4 (34 HSPs)
chr4 (664-737)||(33992620-33992694)
chr4 (668-738)||(35229167-35229237)
chr4 (664-739)||(1985830-1985906)
chr4 (661-736)||(46714383-46714459)
chr4 (661-739)||(52983610-52983689)
chr4 (664-739)||(22625197-22625273)
chr4 (664-739)||(25852208-25852284)
chr4 (664-739)||(32986191-32986267)
chr4 (664-739)||(33696406-33696482)
chr4 (663-737)||(40058981-40059056)
chr4 (664-737)||(19660661-19660735)
chr4 (673-739)||(27528922-27528988)
chr4 (683-737)||(49287872-49287926)
chr4 (664-739)||(18875643-18875719)
chr4 (664-739)||(54127469-54127545)
chr4 (663-737)||(34844887-34844962)
chr4 (673-739)||(51535617-51535683)
chr4 (681-737)||(43719194-43719250)
chr4 (680-739)||(2351024-2351083)
chr4 (680-739)||(12710190-12710249)
chr4 (665-739)||(13873422-13873497)
chr4 (673-739)||(20566353-20566420)
chr4 (664-737)||(5609331-5609405)
chr4 (686-739)||(7392090-7392143)
chr4 (687-739)||(20078111-20078163)
chr4 (664-739)||(35674868-35674944)
chr4 (664-739)||(36131637-36131713)
chr4 (673-739)||(45787831-45787896)
chr4 (680-725)||(55961883-55961928)
chr4 (687-739)||(20527160-20527212)
chr4 (680-739)||(31334555-31334614)
chr4 (673-739)||(42245750-42245816)
chr4 (674-739)||(13584381-13584446)
chr4 (664-712)||(40307536-40307585)
[»] chr1 (39 HSPs)
chr1 (673-739)||(46113529-46113595)
chr1 (663-739)||(4621364-4621441)
chr1 (663-739)||(29057464-29057541)
chr1 (664-739)||(7197373-7197449)
chr1 (664-739)||(24674387-24674463)
chr1 (664-737)||(8077641-8077715)
chr1 (673-737)||(18646857-18646921)
chr1 (664-739)||(21726723-21726799)
chr1 (664-739)||(30677170-30677246)
chr1 (664-739)||(34778336-34778412)
chr1 (673-739)||(7766854-7766920)
chr1 (664-737)||(15059531-15059605)
chr1 (664-737)||(27454995-27455069)
chr1 (664-739)||(46607804-46607880)
chr1 (680-739)||(7578420-7578479)
chr1 (682-736)||(8779866-8779920)
chr1 (673-739)||(24122027-24122093)
chr1 (686-739)||(33905637-33905690)
chr1 (664-712)||(6776139-6776187)
chr1 (664-739)||(7946838-7946914)
chr1 (664-739)||(14258554-14258630)
chr1 (682-738)||(17935782-17935838)
chr1 (661-739)||(25237116-25237195)
chr1 (673-736)||(32930753-32930816)
chr1 (662-739)||(168193-168271)
chr1 (682-739)||(20487317-20487374)
chr1 (664-739)||(23232392-23232468)
chr1 (691-739)||(36156015-36156063)
chr1 (687-739)||(45859170-45859222)
chr1 (673-739)||(2272348-2272414)
chr1 (684-738)||(37351589-37351643)
chr1 (688-737)||(9500484-9500533)
chr1 (682-739)||(23734129-23734186)
chr1 (682-739)||(23741321-23741378)
chr1 (665-739)||(1486415-1486488)
chr1 (665-736)||(24216973-24217045)
chr1 (664-739)||(32729539-32729615)
chr1 (673-739)||(1818738-1818804)
chr1 (683-736)||(19034516-19034569)
[»] chr2 (33 HSPs)
chr2 (664-739)||(41313986-41314062)
chr2 (661-739)||(18976552-18976631)
chr2 (673-739)||(17324770-17324836)
chr2 (664-739)||(33827700-33827776)
chr2 (664-739)||(44946180-44946256)
chr2 (680-739)||(27290599-27290658)
chr2 (664-737)||(30466959-30467033)
chr2 (673-739)||(44976281-44976347)
chr2 (682-739)||(10582117-10582174)
chr2 (664-739)||(11941337-11941413)
chr2 (664-739)||(24195998-24196074)
chr2 (673-739)||(4852562-4852628)
chr2 (664-736)||(36390698-36390769)
chr2 (663-739)||(25293159-25293236)
chr2 (664-739)||(15037953-15038029)
chr2 (664-738)||(6714409-6714484)
chr2 (673-739)||(8258901-8258967)
chr2 (686-739)||(43374452-43374505)
chr2 (663-739)||(19605972-19606048)
chr2 (685-737)||(34516537-34516589)
chr2 (665-739)||(8192478-8192553)
chr2 (680-739)||(23787135-23787194)
chr2 (701-739)||(35171832-35171870)
chr2 (686-739)||(1191530-1191583)
chr2 (686-739)||(5394034-5394087)
chr2 (663-739)||(32845084-32845161)
chr2 (686-739)||(36242439-36242492)
chr2 (686-739)||(45271401-45271454)
chr2 (673-733)||(918833-918892)
chr2 (664-739)||(32526212-32526288)
chr2 (673-736)||(4567567-4567630)
chr2 (683-738)||(19849847-19849902)
chr2 (681-739)||(40997477-40997535)
[»] scaffold0623 (1 HSPs)
scaffold0623 (673-739)||(1183-1249)
[»] scaffold0366 (2 HSPs)
scaffold0366 (673-739)||(9426-9492)
scaffold0366 (673-736)||(12130-12193)
[»] scaffold0199 (1 HSPs)
scaffold0199 (664-736)||(8537-8610)
[»] scaffold0576 (1 HSPs)
scaffold0576 (664-739)||(5209-5285)
[»] scaffold0068 (1 HSPs)
scaffold0068 (664-739)||(41771-41847)
[»] scaffold0459 (1 HSPs)
scaffold0459 (673-736)||(10823-10886)
[»] scaffold0328 (1 HSPs)
scaffold0328 (664-739)||(14985-15061)
[»] scaffold0070 (1 HSPs)
scaffold0070 (664-739)||(40319-40395)
[»] scaffold0026 (1 HSPs)
scaffold0026 (664-739)||(97493-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (665-739)||(52998-53073)
[»] scaffold0217 (1 HSPs)
scaffold0217 (673-739)||(7436-7502)
[»] scaffold0717 (1 HSPs)
scaffold0717 (674-739)||(85-150)
[»] scaffold0028 (1 HSPs)
scaffold0028 (663-739)||(27769-27846)
[»] scaffold0049 (1 HSPs)
scaffold0049 (664-738)||(66756-66831)
[»] scaffold0019 (1 HSPs)
scaffold0019 (688-739)||(161828-161879)
[»] scaffold0460 (1 HSPs)
scaffold0460 (682-739)||(8306-8363)
[»] scaffold0240 (1 HSPs)
scaffold0240 (664-736)||(12884-12957)
[»] scaffold0200 (1 HSPs)
scaffold0200 (664-737)||(26672-26746)


Alignment Details
Target: chr5 (Bit Score: 496; Significance: 0; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 16 - 659
Target Start/End: Original strand, 22876710 - 22877356
Alignment:
Q  16 agaaactacagtttgttatggtagtaacataacaattagcagcatggtgtaattgattagaaagcaatccattgctaatgctatataagagtgtatcgtg 115  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22876710 agaaactaccgtttgttatggcagtaacataacaattagcagcatggtgtaattgattagaaagcaatccattgctaatgctatataagagtgtatcgtg 22876809  T
Q  116 cttcattatcattttaagttagtgttttatcttctctccatttcctctttattaacaaggaaaactaacacaaannnnnnnnaaaaataaaacaaaatat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  22876810 cttcattatcattttaagttagtgttttatcttctctccatttcctctttattaacaaggaaaactaacacaaatttttttaaaaaataaaacaaaatat 22876909  T
Q  216 atttcctcaaaataaacgggatccaaagtttttcttatccccgtgagactttttattttccaataagttccttattct-----cgtgaggctcacctaat 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||    
T  22876910 atttcctcaaaataaacgggatccaaagtttttcttatccccgtgagactttttattttccaataagttccttattctattctcgtgaggctcacctaat 22877009  T
Q  311 acttaacctacgtgatttgggttggcttaagttttaattaatataagacaaaaatcaagtgaaatttgtatataaactattcttgattgagtttatggcc 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22877010 acttaacctacgtgatttgggttggcttaagttttaattaatataagacaaaagtcaagtgaaatttgtatataaactattcttgattgagtttatggcc 22877109  T
Q  411 atgttgtccattaattgggaaattccaagaaagcttataataagcagtggccaaactaattaataaactattgaactaattttagattcagaacaagtca 510  Q
    |||||||||||     ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||||||||    
T  22877110 atgttgtccata----gggaaattccaagta-gcttataataagcagtggccaaactaattaataaactattggaacagttttagattcagaacaagtca 22877204  T
Q  511 ataagacaagcttgttta-atagacatctactagcaagtatgatattttaattaaagtaagtaacttgtatctaacctgacaatctaaataatttatacc 609  Q
    |||||||||||||||||| ||||| |||||| |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||    
T  22877205 ataagacaagcttgtttagatagatatctacaagcaagtatgatattttaaacaaagtaagtgacttgtatctaacctgacaatctaaataatttatacc 22877304  T
Q  610 tatgaaaaggttttgcaatttatggttgtact--tgtgttaatattcaatgc 659  Q
    | ||||||||||||||||| ||||| ||||||  ||||||||||||||||||    
T  22877305 tgtgaaaaggttttgcaatatatggatgtacttatgtgttaatattcaatgc 22877356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 13038657 - 13038581
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  13038657 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 13038581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 33709703 - 33709628
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||||    
T  33709703 aacccatttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccc 33709628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 1827733 - 1827657
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  1827733 aacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 1827657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 11926705 - 11926629
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  11926705 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttagattccc 11926629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 22392695 - 22392771
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22392771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 664 - 736
Target Start/End: Original strand, 25586926 - 25586999
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 25586999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 6014482 - 6014410
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||| |||||||||| ||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||    
T  6014482 aacctatttgggttggcctagtgattggcttgggatcttggagtttgcttctccagagatctcaggttcgatt 6014410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 13108652 - 13108576
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  13108652 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 13108576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 15641308 - 15641232
Alignment:
Q  664 aacccatttgggttga-cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| | | |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  15641308 aacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 15641232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 27498934 - 27498858
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||||||||||||||| |||| || |||||||||||| ||| ||||||||||||||||||||||    
T  27498934 aacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctctagaggtctcaggttcgattccc 27498858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 37495044 - 37495117
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||  |||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  37495044 aacccatttggg--gacctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 37495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 32059643 - 32059568
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  32059643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 32059568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 8484854 - 8484788
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  8484854 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 8484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 38631154 - 38631088
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  38631154 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccc 38631088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 670 - 739
Target Start/End: Complemental strand, 31288142 - 31288073
Alignment:
Q  670 tttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| |||||||||||| ||||||| |||||||||||| ||||| |||||||| |||||||||||    
T  31288142 tttgggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccc 31288073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 34310136 - 34310212
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| ||||||||| || |||| || |||||||||||| ||||||||||||||||||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctccagaggtctcaggttcgattccc 34310212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 673 - 736
Target Start/End: Complemental strand, 15971315 - 15971252
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||| | |||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  15971315 gggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 15971252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 739
Target Start/End: Original strand, 18207226 - 18207277
Alignment:
Q  688 ttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  18207226 ttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 18207277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 664 - 738
Target Start/End: Original strand, 34049816 - 34049891
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| |||  ||||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 34049891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 36954813 - 36954888
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  36954813 acccatttggggttggcctagtggttgccttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 36954888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 731
Target Start/End: Complemental strand, 27487748 - 27487690
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggtt 731  Q
    |||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  27487748 gggttggcctagtggttgatttgggattttggagtttgctcttccagaggtctcaggtt 27487690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 38684212 - 38684278
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| || ||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  38684212 gggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 38684278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 736
Target Start/End: Original strand, 42193491 - 42193552
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||| |||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgcttccccagaggtctcaggttcgatt 42193552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 15931053 - 15931129
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||| | ||||||| ||||||||||||||| || | ||||||||||||||||||    
T  15931053 aacccatttggggttggcctagtggttagcttgggatcttggagtttgcttcttcacaagtctcaggttcgattccc 15931129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 739
Target Start/End: Complemental strand, 7085831 - 7085753
Alignment:
Q  662 gcaacccatttgggt-tgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||  || | |||||||||| ||||||| ||||||||| || ||||||||||||| ||||||||||||    
T  7085831 gcaacccatttggggctggcttagtggttggcttgggatcttggagttttctcctccagaggtctccggttcgattccc 7085753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 23270726 - 23270652
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||| ||| |||||||||||| ||||||| ||||||||||||  |||| |||||||| ||||||||    
T  23270726 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcatccaaaggtctcaagttcgatt 23270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 30485822 - 30485896
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| || || |||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 30485896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 673 - 738
Target Start/End: Original strand, 4603781 - 4603846
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||| || ||||| ||||||||||    
T  4603781 gggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattcc 4603846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 12398628 - 12398575
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  12398628 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12398575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 686 - 735
Target Start/End: Complemental strand, 19456389 - 19456340
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgat 735  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  19456389 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgat 19456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 673 - 720
Target Start/End: Complemental strand, 3715102 - 3715055
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccaga 720  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||    
T  3715102 gggttggcctagtggttggtttgggatcttggagtttgctcctccaga 3715055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 727
Target Start/End: Complemental strand, 25750804 - 25750750
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctca 727  Q
    |||||| |||||||||||  ||||||| |||||||||||| ||||||||||||||    
T  25750804 gggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctca 25750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 736
Target Start/End: Original strand, 5067295 - 5067368
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||| ||||  ||||||||||  ||||||| || ||||||||| |||||||| ||||||||||||||    
T  5067295 aacccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggttcgatt 5067368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 10869747 - 10869693
Alignment:
Q  684 gtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||  ||| ||| |||||||||||| ||||| |||||||||||||||||||    
T  10869747 gtggttgacttgcgatcttggagtttgctcctccaaaggtctcaggttcgattcc 10869693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 12317354 - 12317280
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||| ||| |||||||||||| |||| || |||||||||||| |||  |||||||| |||| ||||    
T  12317354 caacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcttgaggtctcgggtttgatt 12317280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 739
Target Start/End: Original strand, 37397725 - 37397783
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| ||| |||||||||||| ||||| |||||| ||||| |||||||    
T  37397725 ctagtggttggcttgtgatcttggagtttgctcctccaaaggtctaaggtttgattccc 37397783  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 7151346 - 7151399
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||| |||||||| |||||||| ||||    
T  7151346 ggttggcttgggatcttggagtttgctcctcaagaggtcttaggttcgactccc 7151399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 11465110 - 11465037
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||| |||||| ||||||| |||| |||  || |||||||||||| ||||| | |||||||||||||||    
T  11465110 aacccatttcgggttggcctagtgattggcttgaaatcttggagtttgctcctccaaatgtctcaggttcgatt 11465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 8e-23; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 661 - 739
Target Start/End: Original strand, 18532102 - 18532181
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  18532102 tgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 18532181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 34237858 - 34237782
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 34237782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 27746528 - 27746462
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  27746528 gggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 27746462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 28193482 - 28193548
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  28193482 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 28193548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 3734826 - 3734750
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 3734750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 667 - 739
Target Start/End: Complemental strand, 4698922 - 4698850
Alignment:
Q  667 ccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| || || |||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  4698922 ccatttgggttggcccagcggttggtttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 4698850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 4718643 - 4718719
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||    
T  4718643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 4718719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 39349254 - 39349330
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| || ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 39349330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 19471608 - 19471683
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  19471608 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19471683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 19542532 - 19542607
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  19542532 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19542607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 19590164 - 19590089
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  19590164 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 19590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 15259591 - 15259533
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  15259591 ctagtggttggtttgggatcttggattttgctcctccagaggtctcaggttcgattccc 15259533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 2618183 - 2618260
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||  ||||||||||||    
T  2618183 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcttgggttcgattccc 2618260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 687 - 739
Target Start/End: Original strand, 2166721 - 2166773
Alignment:
Q  687 gttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2166721 gttggtttgggatcttggagtttgcttctccaaaggtctcaggttcgattccc 2166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 42643321 - 42643245
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  42643321 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccc 42643245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 21603245 - 21603304
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  21603245 cctagtggttggcttgggatcttagagtttgctcctccagaggtctcaggttcgattccc 21603304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 14632975 - 14633028
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  14632975 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 14633028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 675 - 739
Target Start/End: Complemental strand, 264590 - 264526
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||||||||||| ||||||| || ||||||||| |||||||| |||||||||||||||||    
T  264590 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 264526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 675 - 739
Target Start/End: Original strand, 651331 - 651395
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||||||||||| ||||||| || ||||||||| |||||||| |||||||||||||||||    
T  651331 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 651395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 675 - 739
Target Start/End: Original strand, 837066 - 837130
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||||||||||| ||||||| || ||||||||| |||||||| |||||||||||||||||    
T  837066 gttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccc 837130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Original strand, 20305906 - 20305981
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| ||| |||||||||||| ||||||| || ||||||||| ||||| ||||||||| |||||||||    
T  20305906 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 20305981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 739
Target Start/End: Original strand, 20469940 - 20469991
Alignment:
Q  688 ttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  20469940 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 20469991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Original strand, 21092539 - 21092614
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| ||| |||||||||||| ||||||| || ||||||||| ||||| ||||||||| |||||||||    
T  21092539 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctccaaaggtctcagtttcgattcc 21092614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 735
Target Start/End: Original strand, 8042662 - 8042724
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgat 735  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||| | ||||||||||||||    
T  8042662 gggttgacctagtgcttggcttgggatcttggagtttgctcctccaaaagtctcaggttcgat 8042724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 32879277 - 32879353
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||  ||||||| || ||||||| | ||||||||||||||||||||||||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctccagaggtctcaggttcgattccc 32879353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 673 - 736
Target Start/End: Original strand, 24018390 - 24018453
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||| ||||||||||  ||||||| |||||||||||| ||||| |||||| ||||||||||    
T  24018390 gggttgatctagtggttgacttgggatcttggagtttgctcctccaaaggtctgaggttcgatt 24018453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 42328004 - 42328078
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||||||| || |||||||||| ||||||| |||||||    
T  42328004 acccatttggggttggcctagtggttggcttgggatcttggagttt-ctcctccagaggtgtcaggtttgattccc 42328078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 663 - 736
Target Start/End: Complemental strand, 7558147 - 7558073
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||| ||| |||||| ||| | ||||||| |||||||||||| ||||||| ||||||| |||||||    
T  7558147 caacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccagaagtctcagattcgatt 7558073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 671 - 739
Target Start/End: Complemental strand, 8765721 - 8765653
Alignment:
Q  671 ttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| ||| || |||| ||| ||| |||||||||||| | |||||| |||||||||||||||||    
T  8765721 ttgggttgagctaatgattggcttgagatcttggagtttgctcccccagagatctcaggttcgattccc 8765653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 675 - 739
Target Start/End: Complemental strand, 11715010 - 11714946
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||||||||||||||| ||| ||||||||||||||||   || | |||||||||||||||    
T  11715010 gttggcctagtggttggtttgagatcttggagtttgcttctctcaagatttcaggttcgattccc 11714946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 739
Target Start/End: Complemental strand, 22200742 - 22200687
Alignment:
Q  684 gtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||||||| ||||||||| ||||||   | ||||||||||||||||||    
T  22200742 gtggttggtttgggatcttggagtttacttctctcaaagtctcaggttcgattccc 22200687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 26169051 - 26168976
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    ||||||||| |||||| |||||||||| | ||||||| |||||||||||| |||   |||||||||||| ||||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctctcaaggtctcaggtttgattcc 26168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 28088294 - 28088360
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| | |||||||||  ||||||| |||||||||| |  |||||||||||||| ||||||||||    
T  28088294 gggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccc 28088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 8e-23; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 7800034 - 7799959
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7800034 acccatttggggttgacctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7799959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 661 - 739
Target Start/End: Complemental strand, 40543116 - 40543037
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  40543116 tgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 40543037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 7176065 - 7175989
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7176065 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7175989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 7275275 - 7275351
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7275351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 21218036 - 21217960
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 21217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 2103054 - 2103129
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  2103054 acccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 2103129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 21835159 - 21835225
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  21835159 gggttgacctagtggttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 21835225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 22119896 - 22119962
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  22119896 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 23854394 - 23854468
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 23854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 2751269 - 2751345
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 2751345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 10091186 - 10091262
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10091186 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 10091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 18044105 - 18044181
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  18044105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtcccaggttcgattccc 18044181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 735
Target Start/End: Original strand, 25333417 - 25333489
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgat 735  Q
    |||||||||||| ||| | |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagtttgcttctccagaggtctcaggttcgat 25333489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 22703503 - 22703560
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  22703503 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 22703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 11997847 - 11997923
Alignment:
Q  664 aacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| |||||  ||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 11997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 665 - 736
Target Start/End: Original strand, 19421230 - 19421302
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||| ||||| |||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  19421230 acccatttggggttgacttagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 19421302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 21370595 - 21370671
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||| || || |||| ||||||||||||||||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagtttactccttcagatgtctcaggttcgattccc 21370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 22299864 - 22299923
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||||    
T  22299864 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccc 22299923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 663 - 729
Target Start/End: Complemental strand, 31713099 - 31713032
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcagg 729  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  31713099 caacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcgagaggtctcagg 31713032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 13332616 - 13332550
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  13332616 gggttggcctagtggttggcttgggatcttggagtttgctcctcctgaggtctcaggtacgattccc 13332550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 17212051 - 17212125
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| | |||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattc 17212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 23012701 - 23012635
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| || ||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||||    
T  23012701 gggttggcccagtggttggcttgggatcttggagtttgcttctccagaggtcttaggtttgattccc 23012635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 27312160 - 27312226
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||| |||||| |||||||||||||||    
T  27312160 gggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtttcaggttcgattccc 27312226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 674 - 736
Target Start/End: Complemental strand, 42913705 - 42913643
Alignment:
Q  674 ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||| |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgatt 42913643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 663 - 738
Target Start/End: Original strand, 2344296 - 2344372
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| || |||||| |||||||||    
T  2344296 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagctctcagattcgattcc 2344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 17197153 - 17197077
Alignment:
Q  664 aacccatttgggtt-gacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| | | |||||||||||||||| ||| |||||||||||| ||||| |||||||| |||||||||||    
T  17197153 aacccatttggggtcggcctagtggttggtttgcgatcttggagtttgctcctccataggtctcaagttcgattccc 17197077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 735
Target Start/End: Original strand, 27009357 - 27009429
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgat 735  Q
    |||||||||||| ||| |||||||||||| || |||| ||||||||||||  |||||||||||||||||||||    
T  27009357 aacccatttggggttggcctagtggttggcttcggatcttggagtttgctcatccagaggtctcaggttcgat 27009429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 39145855 - 39145779
Alignment:
Q  664 aacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| |||||||||||||||||  ||||||| |||||||||||| ||||||| ||||  ||||||||||||    
T  39145855 aacccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctccagatgtcttcggttcgattccc 39145779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 21574305 - 21574230
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||| |||   ||||| ||||||||||||||    
T  21574305 acccatttggggttggcctagtggttggtttgggattttggagtgtgctcctctcaaggtcacaggttcgattccc 21574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 735
Target Start/End: Original strand, 28089824 - 28089886
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgat 735  Q
    |||||| |||||||||||| ||| ||| |||||||||||| ||||||| ||||||||||||||    
T  28089824 gggttggcctagtggttggcttgagatcttggagtttgctcctccagatgtctcaggttcgat 28089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 32849589 - 32849665
Alignment:
Q  664 aacccatttgggttga-cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| | | |||||||||||  ||||||| |||||||||||| ||||||||||||| |||| |||||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccc 32849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 43785502 - 43785426
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||||||| ||||||| ||||||| || ||| ||||| ||||| |||||||| |||||||||||    
T  43785502 aacccatttggggttgacctaatggttggcttgggatctttgagattgctcctccaaaggtctcaagttcgattccc 43785426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 684 - 739
Target Start/End: Complemental strand, 14199848 - 14199793
Alignment:
Q  684 gtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||| ||||| || ||||||||| || ||||||||||||||||||||||||||    
T  14199848 gtggttgatttggaatcttggagtttcctcctccagaggtctcaggttcgattccc 14199793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 663 - 737
Target Start/End: Original strand, 31197588 - 31197663
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||| |||  ||||||||||| ||||||| ||||||||||||  |||||| |||||||||| |||||    
T  31197588 caacccatttggggttggtctagtggttggcttgggatcttggagtttgctcatccagatgtctcaggtttgattc 31197663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 731
Target Start/End: Original strand, 28003844 - 28003902
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggtt 731  Q
    ||||||| ||||||||||| ||||||| |||||||||||| ||||||| |||| |||||    
T  28003844 gggttgatctagtggttggcttgggatcttggagtttgctcctccagaagtcttaggtt 28003902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 28950866 - 28950945
Alignment:
Q  663 caacccatttgggttgacctagtggttggtttgggattttgg---agtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||| |||||||||||| ||||| | ||||   |||||||| || |||||||||||||||||| ||||    
T  28950866 caacccatttaggttggcctagtggttggcttggggtcttggagtagtttgctccttcagaggtctcaggttcgactccc 28950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 22696328 - 22696394
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||||||| |||||||| ||||||| |||| |||   |||||||||||| |||||||    
T  22696328 gggttggcctagtggttgatttgggatcttggagtgtgctcctctcaaggtctcaggtttgattccc 22696394  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 28646977 - 28647043
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||  ||||||| ||||||| ||||||||   ||||||||||||||||||||    
T  28646977 gggttggcctagtgattgacttgggatcttggagtgtgcttctctcaaggtctcaggttcgattccc 28647043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 693 - 739
Target Start/End: Original strand, 31273942 - 31273988
Alignment:
Q  693 ttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||| |||||||||||| |||||||| ||||| |||||||||||    
T  31273942 ttgggatcttggagtttgctcctccagagctctcaagttcgattccc 31273988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 739
Target Start/End: Complemental strand, 9718179 - 9718114
Alignment:
Q  674 ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| ||||||||||||  || ||| |||||||||||| ||||| | |||||| |||||||||||    
T  9718179 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccc 9718114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 736
Target Start/End: Original strand, 27704020 - 27704073
Alignment:
Q  683 agtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||| ||| ||| ||| |||||||| || ||||||||||||||||||||    
T  27704020 agtggttggcttgagatcttgaagtttgctcctacagaggtctcaggttcgatt 27704073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 736
Target Start/End: Original strand, 40332097 - 40332170
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||| ||||  ||||||||||| |||  || |||||||||||| ||| | |||||||||||||||||    
T  40332097 aacccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctctaaaggtctcaggttcgatt 40332170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 42814881 - 42814938
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||  ||||||| |||||||||||| |||  || ||||||||||||||||||    
T  42814881 tagtggttgacttgggatcttggagtttgctcctcttgaagtctcaggttcgattccc 42814938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 15566701 - 15566626
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| |||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  15566701 aacccatttgggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 15566626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 45529958 - 45529881
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  45529958 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 45529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 30807356 - 30807280
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  30807356 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 30807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 35492905 - 35492981
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  35492905 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 35492981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 40133652 - 40133576
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  40133652 aacccatttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccc 40133576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 46576342 - 46576418
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46576342 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 46576418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 53424369 - 53424303
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  53424369 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 53424303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 673 - 738
Target Start/End: Original strand, 25379765 - 25379830
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  25379765 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 25379830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 30257617 - 30257694
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  30257617 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 30257694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 8456353 - 8456277
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctccagaggtctcaggttcgattccc 8456277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 21362937 - 21363013
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  21362937 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 21363013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 25289917 - 25289841
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 25289841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 34492778 - 34492702
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccc 34492702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 40940819 - 40940895
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  40940819 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 40940895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 26108303 - 26108362
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  26108303 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 26108362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 663 - 737
Target Start/End: Original strand, 51532782 - 51532857
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  51532782 caacccatttggggttgacctattagttggtttgagattttggagtttgcttctccaaaggtctcatgttcgattc 51532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 52455851 - 52455776
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||    
T  52455851 acccatttggggttggcctagtggttggctagggatcttggagtttgctcctccagaggtctcaggttcgattccc 52455776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 675 - 736
Target Start/End: Original strand, 26174119 - 26174180
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  26174119 gttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 26174180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 29915472 - 29915399
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||| ||||||||||| ||||||  ||||||| |||||||||||| |||||||||||||||||||||||    
T  29915472 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 29964625 - 29964552
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||| ||||||||||| ||||||  ||||||| |||||||||||| |||||||||||||||||||||||    
T  29964625 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgatt 29964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 19857046 - 19857121
Alignment:
Q  663 caacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||||||| ||| |||||||| |||| || |||||||||||| ||||||| ||||||||||||||||||    
T  19857046 caacccatttgggttggcctggtggttggcttgg-atcttggagtttgctcctccagatgtctcaggttcgattccc 19857121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 663 - 738
Target Start/End: Original strand, 48977381 - 48977457
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    ||||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||| |||||||||||||||||||    
T  48977381 caacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattcc 48977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 49258465 - 49258389
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||  |||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  49258465 aacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctccagaggtctcaggttcgattccc 49258389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 675 - 739
Target Start/End: Complemental strand, 52821826 - 52821762
Alignment:
Q  675 gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  52821826 gttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 52821762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 681 - 739
Target Start/End: Original strand, 9853628 - 9853686
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  9853628 ctagtggttagtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 9853686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 7485728 - 7485652
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| | |||||||||  ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 7485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 31538041 - 31537965
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| || |||| |||||||||||| |||||||||||||| ||| |||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcctccagaggtctcatgtttgattccc 31537965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 45272619 - 45272543
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||| ||||| ||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  45272619 aacccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctccagatgtctcagtttcgattccc 45272543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 681 - 737
Target Start/End: Complemental strand, 53234095 - 53234039
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctccagaagtctcaggttcgattc 53234039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 663 - 736
Target Start/End: Original strand, 50582985 - 50583059
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||   |||| ||||||||||||    
T  50582985 caacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgatt 50583059  T

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Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 18177091 - 18177014
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||  ||| ||| ||||||||||||  ||||||||| |||||||||||||||    
T  18177091 caacccatttggggttggcctagtggttgacttgagatcttggagtttgctcttccagaggtatcaggttcgattccc 18177014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 32151419 - 32151492
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||||| |||||||||||  ||||||| |||||||||||| ||||| |||| |||  ||||||||    
T  32151419 aacccatttgggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattc 32151492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 670 - 739
Target Start/End: Complemental strand, 53288908 - 53288839
Alignment:
Q  670 tttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| |||| || ||||||||||||||||| || ||||||||| ||||| |||||||||| |||||||||    
T  53288908 tttgcgttggccaagtggttggtttgggatattagagtttgctcctccaaaggtctcaggctcgattccc 53288839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 7470418 - 7470342
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||  |||||||||||  ||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccc 7470342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 9842915 - 9842990
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||||||||||| ||||||||| || ||||||||||||| | ||||||||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagttttctcctccagaggtctc-gattcgattccc 9842990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 673 - 737
Target Start/End: Original strand, 36660774 - 36660838
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||||||||||||| |||| |||||||||||| |||   ||||||||||||| ||||    
T  36660774 gggttgacctagtggttggtttaggatcttggagtttgctcctctcaaggtctcaggttcaattc 36660838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 25344250 - 25344184
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||  ||||||| || ||||||||| |||||||| ||||||||| |||||||    
T  25344250 gggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccc 25344184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 701 - 738
Target Start/End: Original strand, 1692866 - 1692903
Alignment:
Q  701 ttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| |||||||||||||||||||||||||    
T  1692866 ttggagtttgctcctccagaggtctcaggttcgattcc 1692903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 10083999 - 10083946
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10083999 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccc 10083946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 10190922 - 10190869
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10190922 ggttggcttgggatcttggagtttgctcctccagagggctcaggtttgattccc 10190869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 739
Target Start/End: Complemental strand, 55371477 - 55371412
Alignment:
Q  674 ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| |||||||||||| ||| ||||||||||| ||||||||   |||||||| |||||||||||    
T  55371477 ggttggcctagtggttggcttgcgattttggagtatgcttctctcaaggtctcatgttcgattccc 55371412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 693 - 737
Target Start/End: Complemental strand, 39042025 - 39041981
Alignment:
Q  693 ttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||    
T  39042025 ttgggatcttggagtttgctcctccagaggtctcaagttcgattc 39041981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 55287797 - 55287873
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| | |||||||||| |||| || || ||||||||| || ||||||| |||||||||||||||    
T  55287797 aacccatttggggttggcatagtggttggcttggaatcttagagtttgctccttcagaggtttcaggttcgattccc 55287873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 736
Target Start/End: Complemental strand, 14343469 - 14343418
Alignment:
Q  685 tggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  14343469 tggttggtttgagatcttggagtttgctcctccagatgtctcagattcgatt 14343418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 4462637 - 4462703
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||| ||| |||||||||||| || || | |||||| |||||||||||    
T  4462637 gggttggcctagtggttggcttgagatcttggagtttgctacttcaaaagtctcatgttcgattccc 4462703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 662 - 739
Target Start/End: Original strand, 9238967 - 9239045
Alignment:
Q  662 gcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9238967 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 9239045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 5360274 - 5360198
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||| ||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  5360274 aacccatttggagttggcctggtggttggcttgggatcttggagtttgcttctcaagaggtctcaggttcgattccc 5360198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 673 - 737
Target Start/End: Original strand, 11448875 - 11448939
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  11448875 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 11448939  T

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Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 12591631 - 12591707
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 12591707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 15360301 - 15360225
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 15360225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 22576061 - 22576137
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  22576061 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcagattcgattccc 22576137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 673 - 736
Target Start/End: Complemental strand, 9690831 - 9690768
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||    
T  9690831 gggttgacctagtggttggtttgagattttggagtttgctcttccagaggtcttaggttcgatt 9690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 11007159 - 11007233
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| |||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  11007159 aacccatttggggttgatctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattc 11007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 33718661 - 33718587
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||| ||||||  ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  33718661 aacccatttagggttggtctagtggttggtttgggatcttggagtttacttctccagagatctcaggttcgattc 33718587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 661 - 737
Target Start/End: Original strand, 13753231 - 13753308
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||||| ||| |||||||||||| || |||| |||||||||||| ||||||||||||||||||| ||||    
T  13753231 tgcaacccatttggggttggcctagtggttggctttggatcttggagtttgctcctccagaggtctcaggttcaattc 13753308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 654349 - 654273
Alignment:
Q  664 aacccatttgggtt-gacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||||| | |||||||| ||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 654273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 668 - 739
Target Start/End: Original strand, 14212890 - 14212962
Alignment:
Q  668 catttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||| |||||||| ||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||    
T  14212890 catttgggattgacctaatggttggctcgggatcttggagtttgctcctccagaggtctcaggttcgattccc 14212962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 21148713 - 21148637
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||||||||||| | ||||||||||| |||||||||||    
T  21148713 aacccatttggagttggcctagtggttggcttgggatcttggagtttgctttttcagaggtctcaagttcgattccc 21148637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 34147340 - 34147416
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  34147340 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccc 34147416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 34159956 - 34160032
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| ||||||||||||  |||||| ||||||||||||||||||    
T  34159956 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcttccagaagtctcaggttcgattccc 34160032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 1344941 - 1345005
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||||||||  ||||| |||||||||| | ||||||||||||||||||||||||||    
T  1344941 gggttgacctagtggttggt--gggatcttggagtttgttcctccagaggtctcaggttcgattccc 1345005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 21982513 - 21982447
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| ||| |||||||| |||||||||||| |||||||||||||    
T  21982513 gggttggcctagtggttggcttgggatcttgaagtttgctcctccagaggtctgaggttcgattccc 21982447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 3222837 - 3222762
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| ||| |||||||| || |||||||||||||||||||||||    
T  3222837 aacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcct-cagaggtctcaggttcgattccc 3222762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 681 - 734
Target Start/End: Original strand, 9843950 - 9844003
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcga 734  Q
    ||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||    
T  9843950 ctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcga 9844003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 9208246 - 9208322
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| |||   ||||||||||||||||||||    
T  9208246 aacccatttggggttgttctagtggttggattgggatcttggagtttgctcctctcaaggtctcaggttcgattccc 9208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 28672061 - 28672137
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||| ||| |||||||||||| ||| |||||||| |||||||||||||    
T  28672061 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctcctctagaggtcttaggttcgattccc 28672137  T

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Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 683 - 739
Target Start/End: Original strand, 11840915 - 11840971
Alignment:
Q  683 agtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| ||||||| || || |||||| |||||||||||||||| |||||||||    
T  11840915 agtggttggcttgggatattagaatttgctcctccagaggtctcaggctcgattccc 11840971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 737
Target Start/End: Complemental strand, 28968222 - 28968171
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||| ||||||| |||||||||||| ||| ||||||||||| ||||||||    
T  28968222 ggttggcttgggatcttggagtttgctcctctagaggtctcagattcgattc 28968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 17081239 - 17081181
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| || |||| |||||||||||| ||||||| |||||| ||| |||||||    
T  17081239 ctagtggttggcttaggatcttggagtttgctcctccagatgtctcaagtttgattccc 17081181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 685 - 739
Target Start/End: Complemental strand, 17149637 - 17149583
Alignment:
Q  685 tggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| ||||||| |||| |||   ||||||||||||||||||||    
T  17149637 tggttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccc 17149583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 17706489 - 17706435
Alignment:
Q  684 gtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||  ||||||| |||||||||||| ||||||| |||||| ||||||||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctccagaagtctcaagttcgattcc 17706435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 732
Target Start/End: Original strand, 33499468 - 33499537
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttc 732  Q
    |||||||||||| ||| ||| |||||||| ||||||| |||||||||||| |||   |||||||||||||    
T  33499468 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctctcaaggtctcaggttc 33499537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 33992620 - 33992694
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  33992620 aacccatttagggttgacctagtggttggtttgggatcttggagtttgctcctccagaggtcttaggttcgattc 33992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 668 - 738
Target Start/End: Original strand, 35229167 - 35229237
Alignment:
Q  668 catttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  35229167 catttgggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 35229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 1985830 - 1985906
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 1985906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 661 - 736
Target Start/End: Original strand, 46714383 - 46714459
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  46714383 tgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 46714459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 661 - 739
Target Start/End: Original strand, 52983610 - 52983689
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| ||| |||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  52983610 tgcaacccatttggggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccc 52983689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 22625273 - 22625197
Alignment:
Q  664 aacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||| |||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||    
T  22625273 aacccatttgaggttggcctagtggttggcttgggatcttggagtttactcctccagaggtctcaggttcgattccc 22625197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 25852208 - 25852284
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 25852284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 32986191 - 32986267
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 32986267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 33696482 - 33696406
Alignment:
Q  664 aacccattt-gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  33696482 aacccatttagggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 33696406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 663 - 737
Target Start/End: Complemental strand, 40059056 - 40058981
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||||    
T  40059056 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattc 40058981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 19660735 - 19660661
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||| |||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||    
T  19660735 aacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattc 19660661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 27528988 - 27528922
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| | |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  27528988 gggttggcttagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 27528922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 683 - 737
Target Start/End: Original strand, 49287872 - 49287926
Alignment:
Q  683 agtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  49287872 agtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattc 49287926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 18875719 - 18875643
Alignment:
Q  664 aacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||| |||| || || |||||||||||||||||    
T  18875719 aacccatttgtggttgacatagtggttggtttgggattttagagtttgtttcttcaaagatctcaggttcgattccc 18875643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 54127545 - 54127469
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccc 54127469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 663 - 737
Target Start/End: Complemental strand, 34844962 - 34844887
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||| ||| |||||||||| | ||| ||| |||||||||||| ||||||||||||||||||||||||    
T  34844962 caacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctccagaggtctcaggttcgattc 34844887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 51535617 - 51535683
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||  ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  51535617 gggttggcctagtggttgacttgggatcttggagtttgctcctccacaggtctcaggttcgattccc 51535683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 681 - 737
Target Start/End: Complemental strand, 43719250 - 43719194
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| |||||||||||||    
T  43719250 ctagtggttggtttgagatcttggagtttgctcctccagaggtttcaggttcgattc 43719194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 2351024 - 2351083
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||    
T  2351024 cctagtggttggcttggaatcttgaagtttgctcctccagaggtctcaggttcgattccc 2351083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 12710190 - 12710249
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||||||||||| ||||||| ||||||||   ||||||||||||||||||||    
T  12710190 cctagtggttggtttgggatcttggagtatgcttctcttaaggtctcaggttcgattccc 12710249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 13873497 - 13873422
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||| | ||||||| |||||||||||| || || ||||||||||||||||||||    
T  13873497 acccatttggggttggcctagtggtttgcttgggatcttggagtttgctccttcaaaggtctcaggttcgattccc 13873422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 20566353 - 20566420
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggt-ctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  20566353 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtgatcaggttcgattccc 20566420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 5609405 - 5609331
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||||||||||| ||||||| ||||||||||||  | ||| |||||||||||||||||    
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcattcagtggtctcaggttcgattc 5609331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 7392143 - 7392090
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  7392143 ggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 7392090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 739
Target Start/End: Complemental strand, 20078163 - 20078111
Alignment:
Q  687 gttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  20078163 gttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 20078111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 35674944 - 35674868
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| || ||||||||| ||||||| ||||||||||||  |||| ||||| ||||||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtttgctcttccaaaggtcacaggttcgattccc 35674868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 36131713 - 36131637
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| | |||||||| | |||||||||||||||| | | ||||||| ||||||||||||||||||    
T  36131713 aacccatttggggttggcatagtggtttgcttgggattttggagttcgttcctccagatgtctcaggttcgattccc 36131637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 45787896 - 45787831
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| |||| || ||||| |||||| |||||||| |||||||||||||||||    
T  45787896 gggttggcctagtggttggcttggaatcttgga-tttgctcctccagagatctcaggttcgattccc 45787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 680 - 725
Target Start/End: Complemental strand, 55961928 - 55961883
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtct 725  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||    
T  55961928 cctagtggttggcttgggatcttggagtttgctcctccagaggtct 55961883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 687 - 739
Target Start/End: Complemental strand, 20527212 - 20527160
Alignment:
Q  687 gttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| |||||||||||||| | |||||||||||||| ||| |||||||    
T  20527212 gttggtttgagattttggagtttgttcctccagaggtctcaagtttgattccc 20527160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 31334555 - 31334614
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||||||| ||||||| ||||||||   |||||||| |||||||||||    
T  31334555 cctagtggttgatttgggatattggagtgtgcttctcttaaggtctcaagttcgattccc 31334614  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 42245750 - 42245816
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||  ||||||| || ||||||||| ||| | ||||||| ||||||||||||    
T  42245750 gggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccc 42245816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 674 - 739
Target Start/End: Complemental strand, 13584446 - 13584381
Alignment:
Q  674 ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| ||||||||||||  || ||| |||||||||||| ||||| | |||||| |||||||||||    
T  13584446 ggttggcctagtggttggcctgagatattggagtttgctcctccaaaagtctcaagttcgattccc 13584381  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 712
Target Start/End: Original strand, 40307536 - 40307585
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgct 712  Q
    |||||||||||  ||||||||||| |||||||||||||||||||| ||||    
T  40307536 aacccatttggaattgacctagtgtttggtttgggattttggagtgtgct 40307585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 3e-22; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 46113595 - 46113529
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46113595 gggttggcctagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 46113529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 4621441 - 4621364
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4621441 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 4621364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 29057541 - 29057464
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  29057541 caacccatttggggttggcctagtggttggtttgggatcttggagtttgctgctccaaaggtctcaggttcgattccc 29057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 7197449 - 7197373
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7197373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 24674387 - 24674463
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  24674387 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 24674463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 664 - 737
Target Start/End: Original strand, 8077641 - 8077715
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  8077641 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 8077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 673 - 737
Target Start/End: Original strand, 18646857 - 18646921
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||||||||||    
T  18646857 gggttgacctagtggttggcttgtgatctttgagtttgcttctccagaggtctcaggttcgattc 18646921  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 21726723 - 21726799
Alignment:
Q  664 aacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||||||||||||||| |||||| | ||| |||||||| ||||||||||||||||||||||||||    
T  21726723 aacccatttgaggttgacctagtggttgatttgggttcttgaagtttgctcctccagaggtctcaggttcgattccc 21726799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 30677170 - 30677246
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||| ||||| |||||||||||| |||||||    
T  30677170 aacccatttggggttgacctagtggttggtttgggatctaggagtttgctcctccaaaggtctcaggtttgattccc 30677246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 34778336 - 34778412
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggtttgattccc 34778412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 7766920 - 7766854
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||| | ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  7766920 gggttggcctagtggttagcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 7766854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 15059605 - 15059531
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctccagaggtctcaggttcgattc 15059531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 27455069 - 27454995
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  27455069 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattc 27454995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 46607804 - 46607880
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 46607880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 7578420 - 7578479
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||    
T  7578420 cctagtggttggcttgggatcttggagtttgttcctccagaggtctcaggttcgattccc 7578479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 682 - 736
Target Start/End: Complemental strand, 8779920 - 8779866
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  8779920 tagtggttgatttgggatcttggagtttgcttctccagaggtctcagcttcgatt 8779866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 24122027 - 24122093
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| | |||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  24122027 gggttggcttagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccc 24122093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 33905690 - 33905637
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  33905690 ggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 33905637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 712
Target Start/End: Original strand, 6776139 - 6776187
Alignment:
Q  664 aacccatttgggttgacctagtggttggtttgggattttggagtttgct 712  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  6776139 aacccatttgggttggcctagtggttggtttgggatcttggagtttgct 6776187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 7946838 - 7946914
Alignment:
Q  664 aacccatttgggtt-gacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| | |||||||||||||| ||| ||| ||| |||||||| |||||||||||||| |||||||||||    
T  7946838 aacccatttggggtcgacctagtggttggcttgagatcttgaagtttgctcctccagaggtctcaagttcgattccc 7946914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 14258630 - 14258554
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||| | ||||||| ||||| ||||||||||||    
T  14258630 aacccatttgggcttggcctagtggttggcttgggatcttggagtttgttcctccagatgtctctggttcgattccc 14258554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 682 - 738
Target Start/End: Original strand, 17935782 - 17935838
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||    
T  17935782 tagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattcc 17935838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 661 - 739
Target Start/End: Complemental strand, 25237195 - 25237116
Alignment:
Q  661 tgcaacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| | |||| |||| ||||| ||||||||| ||||||||||||||||   ||||||||||||||||||||    
T  25237195 tgcaacccatttagagttggcctaatggttagtttgggatcttggagtttgcttctctcaaggtctcaggttcgattccc 25237116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 673 - 736
Target Start/End: Original strand, 32930753 - 32930816
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||||||||||||||||||||| || ||||||||| || || ||||||||||| ||||||||    
T  32930753 gggttgacctagtggttggtttggaatcttggagtttactccttcagaggtctcaagttcgatt 32930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 662 - 739
Target Start/End: Original strand, 168193 - 168271
Alignment:
Q  662 gcaacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| |||| |||||||||||| ||||||| || |||||||||  | || ||||||||||||||||||||    
T  168193 gcaacccatttggagttggcctagtggttggcttgggatcttagagtttgctctttcaaaggtctcaggttcgattccc 168271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 682 - 739
Target Start/End: Complemental strand, 20487374 - 20487317
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||| |||||||||||    
T  20487374 tagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccc 20487317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 23232468 - 23232392
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||||||| ||| ||||||||  ||||||||| |||||||||||||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttgaagtttgctcttccagaggtttcaggttcgattccc 23232392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 691 - 739
Target Start/End: Complemental strand, 36156063 - 36156015
Alignment:
Q  691 gtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  36156063 gtttgggatcttggagtttgctcctccagaggtgtcaggttcgattccc 36156015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 687 - 739
Target Start/End: Complemental strand, 45859222 - 45859170
Alignment:
Q  687 gttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| ||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  45859222 gttggcttgggatcttggagtttgctcctctagaggtctcaggttcgattccc 45859170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 2272348 - 2272414
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||  ||||||| || ||||||||| || ||||||||||||||| |||||||    
T  2272348 gggttggcctagtggttgacttgggatcttagagtttgctcctacagaggtctcaggtttgattccc 2272414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 738
Target Start/End: Complemental strand, 37351643 - 37351589
Alignment:
Q  684 gtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||| ||||||| |||||||||||| ||||| | |||||||||||||||||    
T  37351643 gtggttggcttgggatcttggagtttgctcctccaaatgtctcaggttcgattcc 37351589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 688 - 737
Target Start/End: Complemental strand, 9500533 - 9500484
Alignment:
Q  688 ttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  9500533 ttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattc 9500484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 23734129 - 23734186
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| ||||| ||||||| || || |||||| ||||||||||||||||||||||||||    
T  23734129 tagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccc 23734186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 682 - 739
Target Start/End: Original strand, 23741321 - 23741378
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| ||||| ||||||| || || |||||| ||||||||||||||||||||||||||    
T  23741321 tagtagttggcttgggatcttagaatttgctcctccagaggtctcaggttcgattccc 23741378  T

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Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 665 - 739
Target Start/End: Original strand, 1486415 - 1486488
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||  |||| |||   ||||||||||||||||||||    
T  1486415 acccatttggggttgacctagtggttggcttgggatcttggag--tgctactctcaaggtctcaggttcgattccc 1486488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 665 - 736
Target Start/End: Original strand, 24216973 - 24217045
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||| |||||||||||||||  ||||||| ||||||| |||| |||   |||||||||||||||||    
T  24216973 acccatttggggttgacctagtggttgacttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 24217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 32729539 - 32729615
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| || ||||||||| |||   | ||||||||||||||||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctctcaaagtctcaggttcgattccc 32729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 1818738 - 1818804
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||| || ||||| || |||| ||||||||||||  ||||||||| |||||||||||||||    
T  1818738 gggttggcctggtagttggcttaggatcttggagtttgctcttccagaggtttcaggttcgattccc 1818804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 736
Target Start/End: Complemental strand, 19034569 - 19034516
Alignment:
Q  683 agtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    ||||||||||||||||| |||||||||| | ||| | |||| ||||||||||||    
T  19034569 agtggttggtttgggatcttggagtttgttcctcaaaaggtttcaggttcgatt 19034516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 5e-21; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 41313986 - 41314062
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  41313986 aacccatttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 41314062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 661 - 739
Target Start/End: Complemental strand, 18976631 - 18976552
Alignment:
Q  661 tgcaacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||| |||||||||||    
T  18976631 tgcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcatgttcgattccc 18976552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 17324770 - 17324836
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  17324770 gggttggcctagtggttggtttggtatcttggagtttgctcctccagaggtctcaggttcgattccc 17324836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 33827776 - 33827700
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggagattgctcctccagaggtctcaggttcgattccc 33827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 44946256 - 44946180
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 44946180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 680 - 739
Target Start/End: Original strand, 27290599 - 27290658
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  27290599 cctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 27290658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 30467033 - 30466959
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||| | ||| ||||||||||||||||||||    
T  30467033 aacccatttggggttggcctagtggttggtttgggatattggagtttgttcctctagaggtctcaggttcgattc 30466959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 44976347 - 44976281
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  44976347 gggttggcctagtggttggcttgggatcttggggtttgctcctccagaggtctcaggttcgattccc 44976281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 682 - 739
Target Start/End: Complemental strand, 10582174 - 10582117
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10582174 tagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 10582117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 11941413 - 11941337
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  11941413 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcaattccc 11941337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 24195998 - 24196074
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| |||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  24195998 aacccatttggggttggcctagtggttggcttgggattttggggttcgctcctccagaggtttcaggttcgattccc 24196074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 4852562 - 4852628
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||||||  |||| || |||||||||||| ||||| ||||||||||||||||||||    
T  4852562 gggttgacctagtggttgacttggaatcttggagtttgctcctccaaaggtctcaggttcgattccc 4852628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 36390769 - 36390698
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||||||||| ||| |||||||||||||||||||| |  ||||||||||||||| |||||||||||||||||    
T  36390769 aacccatttggggttggcctagtggttggtttgggatct--gagtttgcttctccaaaggtctcaggttcgatt 36390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 25293159 - 25293236
Alignment:
Q  663 caacccatttg-ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||||  ||||||||||  ||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  25293159 caacccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctcgagaggtctcaggttcgattccc 25293236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 15037953 - 15038029
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  | ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 15038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Complemental strand, 6714484 - 6714409
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| ||| |||| ||||||| ||| ||| |||||||||||| |||||||||||||||||| ||||||    
T  6714484 aacccatttgggattggcctaatggttggcttgagatcttggagtttgctcctccagaggtctcaggtttgattcc 6714409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 8258901 - 8258967
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||| || ||||| ||||| ||| |||||||||||| ||||||| ||||||||||||||||||    
T  8258901 gggttgacataatggttagtttgagatcttggagtttgctcctccagatgtctcaggttcgattccc 8258967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 43374505 - 43374452
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| |||||||||||| || |||||||||||||||||||||||    
T  43374505 ggttggcttgggatcttggagtttgctccttcagaggtctcaggttcgattccc 43374452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Complemental strand, 19606048 - 19605972
Alignment:
Q  663 caacccatttgggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||| ||||||| |||||||||||| ||||||| |||||||  ||| |||   ||||||||||||||||||||    
T  19606048 caacccatctgggttgccctagtggttggcttgggatcttggagtgcgctcctctcaaggtctcaggttcgattccc 19605972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 737
Target Start/End: Complemental strand, 34516589 - 34516537
Alignment:
Q  685 tggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    ||||||| ||||||| |||||||||||| |||||||||| |||||||||||||    
T  34516589 tggttggcttgggatcttggagtttgctcctccagaggtttcaggttcgattc 34516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 8192553 - 8192478
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||||| |||| |||   ||||||||||||||||||||    
T  8192553 acccatttggggttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgattccc 8192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 680 - 739
Target Start/End: Complemental strand, 23787194 - 23787135
Alignment:
Q  680 cctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||||||  |||||||| ||||||||| || |||||||||||| |||||||    
T  23787194 cctagtggttggtttgaaattttggaatttgcttctacaaaggtctcaggtttgattccc 23787135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 701 - 739
Target Start/End: Original strand, 35171832 - 35171870
Alignment:
Q  701 ttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35171832 ttggagtttgctcctccagaggtctcaggttcgattccc 35171870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 1191530 - 1191583
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||| ||| |||||||||||| |||||||||||||||||||| |||||    
T  1191530 ggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgtttccc 1191583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 5394034 - 5394087
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||| ||| |||||||||||| ||||| ||||||||||||||||||||    
T  5394034 ggttggcttgagatcttggagtttgctcctccaaaggtctcaggttcgattccc 5394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 32845084 - 32845161
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| ||| |||||| ||| | ||||||| |||||||||||| ||||| | || |||||||||||||||    
T  32845084 caacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctccaaaagtttcaggttcgattccc 32845161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Complemental strand, 36242492 - 36242439
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| ||| | |||||| ||||||||||||||||||||||||||    
T  36242492 ggttggcttgggatcttgaaatttgctcctccagaggtctcaggttcgattccc 36242439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 686 - 739
Target Start/End: Original strand, 45271401 - 45271454
Alignment:
Q  686 ggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| ||||||| || |||||||||||||||||||| ||| |||||||||||    
T  45271401 ggttggcttgggatcttagagtttgcttctccagaggtttcatgttcgattccc 45271454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 673 - 733
Target Start/End: Complemental strand, 918892 - 918833
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcg 733  Q
    ||||||||||||||||||| ||||||||||| |||||||| || | ||||||||| |||||    
T  918892 gggttgacctagtggttggcttgggattttgaagtttgctcct-ctgaggtctcaagttcg 918833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 32526288 - 32526212
Alignment:
Q  664 aacccatttgg-gttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| |||| | ||||||||| |||||||| ||| |||||||| |||   ||||||||||||||||||||    
T  32526288 aacccatttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgattccc 32526212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 736
Target Start/End: Complemental strand, 4567630 - 4567567
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||| |||||| ||||| ||||||| ||| |||||||| || |||| |||||||||||||||    
T  4567630 gggttggcctagtagttggcttgggatcttgaagtttgctccttcagaagtctcaggttcgatt 4567567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 683 - 738
Target Start/End: Original strand, 19849847 - 19849902
Alignment:
Q  683 agtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    ||||||||||||| ||| |||||||||||| ||||| |||||| | ||||||||||    
T  19849847 agtggttggtttgagatcttggagtttgctcctccaaaggtcttaagttcgattcc 19849902  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 681 - 739
Target Start/End: Complemental strand, 40997535 - 40997477
Alignment:
Q  681 ctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||  ||||||| |||||||||||| ||||| |||||||| |||| ||||||    
T  40997535 ctagtggttgacttgggatcttggagtttgctcctccaaaggtctcatgttcaattccc 40997477  T

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Target: scaffold0623 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 1249 - 1183
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  1249 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 1183  T

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Target: scaffold0366 (Bit Score: 51; Significance: 8e-20; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 9492 - 9426
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9492 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 9426  T

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Target: scaffold0366; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 673 - 736
Target Start/End: Complemental strand, 12193 - 12130
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  12193 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 12130  T

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Target: scaffold0199 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 8610 - 8537
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  8610 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 8537  T

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Target: scaffold0576 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 5285 - 5209
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccc 5209  T

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Target: scaffold0068 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 41847 - 41771
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  41847 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 41771  T

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Target: scaffold0459 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 673 - 736
Target Start/End: Complemental strand, 10886 - 10823
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  10886 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgatt 10823  T

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Target: scaffold0328 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 14985 - 15061
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| ||||||||||||  |||||| |||||||||||| ||||||||||||||||||| ||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtttgctcctccagaggtctcaggttcaattccc 15061  T

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Target: scaffold0070 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Original strand, 40319 - 40395
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| || |||| |||||||||||| || |||||||||||||||||||||||    
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctccttcagaggtctcaggttcgattccc 40395  T

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Target: scaffold0026 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 664 - 739
Target Start/End: Complemental strand, 97569 - 97493
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||||| ||| |||||||||||| ||||||| ||| |||||||| ||||| ||||||||||||||||||||    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccc 97493  T

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Target: scaffold0051 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 665 - 739
Target Start/End: Complemental strand, 53073 - 52998
Alignment:
Q  665 acccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||||||||| |||||||||  |||||||||||||||    
T  53073 acccatttgggattggcctagtggttggcttgggatcttggagtttgctcctccagaggcttcaggttcgattccc 52998  T

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Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 739
Target Start/End: Complemental strand, 7502 - 7436
Alignment:
Q  673 gggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||| |||||| ||||| ||||||| |||||||||||| |||||||| |||||||||||||||||    
T  7502 gggttggcctagtagttggcttgggatcttggagtttgctcctccagagatctcaggttcgattccc 7436  T

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Target: scaffold0717 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 674 - 739
Target Start/End: Complemental strand, 150 - 85
Alignment:
Q  674 ggttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||| |||||||||||| ||| ||| ||||||||||||  |||||||||||||||||||||||||    
T  150 ggttggcctagtggttggcttgtgatcttggagtttgctcgtccagaggtctcaggttcgattccc 85  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 663 - 739
Target Start/End: Original strand, 27769 - 27846
Alignment:
Q  663 caacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||||||| |||   ||||||| ||||||||||||    
T  27769 caacccatttggggttggtctagtggttggtttgggattttggagtttgctcctctcaaggtctcgggttcgattccc 27846  T

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Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 738
Target Start/End: Original strand, 66756 - 66831
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattcc 738  Q
    |||||||||||| |||  ||||||||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtttgctcctccaaaggtctcacgttcgattcc 66831  T

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Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 739
Target Start/End: Original strand, 161828 - 161879
Alignment:
Q  688 ttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  161828 ttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccc 161879  T

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Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 682 - 739
Target Start/End: Complemental strand, 8363 - 8306
Alignment:
Q  682 tagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattccc 739  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||| |||||||||||    
T  8363 tagtggttggctcgggatcttggagtttgctcctccagaggtctcaagttcgattccc 8306  T

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Target: scaffold0240 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 736
Target Start/End: Complemental strand, 12957 - 12884
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgatt 736  Q
    |||| ||||||| ||| |||||||||||  ||||||| |||||||| ||| |||||||| ||||||||||||||    
T  12957 aacctatttgggattggcctagtggttgacttgggatcttggagttcgctcctccagagatctcaggttcgatt 12884  T

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Target: scaffold0200 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 737
Target Start/End: Complemental strand, 26746 - 26672
Alignment:
Q  664 aacccatttggg-ttgacctagtggttggtttgggattttggagtttgcttctccagaggtctcaggttcgattc 737  Q
    |||||||||||| ||| |||| ||||||| || |||| ||||||||||||| || |||||||||| ||| |||||    
T  26746 aacccatttggggttggcctactggttggcttaggatcttggagtttgcttttcaagaggtctcatgtttgattc 26672  T

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