View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15360_high_21 (Length: 365)
Name: NF15360_high_21
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15360_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 1407223 - 1407522
Alignment:
| Q |
1 |
gcatgataataataattccaccttatcatgtcaccgtatatattgacaataaccaaaagtgtaaaagtagattgaatataccaccttttatacaatcaaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
1407223 |
gcatgataataataattccaccttatcatgtcaccgtatatattgacaataaccaaaagtgtaaaagtagattgaatataccaccatttatacaatcaaa |
1407322 |
T |
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| Q |
101 |
attctaaaggaaaaagaagaagaaaaataaatagatatgcttggaccgaccaattacatcatacacgtaatattcttcatatcattcatacattccttgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1407323 |
attctaaaggaaaaagaagaagaaaaataaatagatatgcttggaccgaccaattacatcatacacgtaatattcttcatatcattcatacattccttgg |
1407422 |
T |
|
| Q |
201 |
ggataaagagtgctattaaactcatccatgataaaacggaaacagggagacatagaaagatacagaaagatagtgaaagttgatgtagagttatctatcg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1407423 |
ggataaagagtgctattaaactcatccatgataaaacggaaacagggagacatagaaagatacagaaagatagtgaaagttgatgtagagttatctatcg |
1407522 |
T |
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