View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15360_high_25 (Length: 315)
Name: NF15360_high_25
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15360_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 306
Target Start/End: Original strand, 6926438 - 6926728
Alignment:
| Q |
18 |
ggttttaggtatccaatgcatggcattgactatgaagcacatacacggacacgttactgatgctaatactttgacactgataataacttgagaaaattaa |
117 |
Q |
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| T |
6926438 |
ggttttaggtatccaatgcatagcattgactatgaagcacatacacggacacgttactgatgctaatactttgacactgataataacttgagaaaattaa |
6926537 |
T |
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| Q |
118 |
ccatatgtgttggtgtctgctcagtgttagatactggcacatgtcggacaccgtgtgttagtgctacttatttaggagttggatagtgttttacgaatgc |
217 |
Q |
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| T |
6926538 |
ccatatgtgttggtgtctgctcagtgttagatactggcacatgtcggacaccgtgtgttagtgctacttatttaggagttggatagtgttttacgaatgc |
6926637 |
T |
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| Q |
218 |
ttgatagctctgtagtactgaacgaaggcatgtccggtgtccgaccggtgttgtgaccaacaatgacac--gtgattaaatattcttcgac |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| |
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| T |
6926638 |
ttgatagctctgtagtactgaacgaaggcatgtccggtgtccgaccggtgttgtgaccaacaatgacacatgtgattaaattttattcgac |
6926728 |
T |
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