View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15360_high_7 (Length: 539)
Name: NF15360_high_7
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15360_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 484; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 15 - 526
Target Start/End: Complemental strand, 28860906 - 28860395
Alignment:
| Q |
15 |
attattctaattgacagctatggactgaacacagcctacacaggattgaaatagaacattatgatcaattcaatttgtgccaataataatactagtgatt |
114 |
Q |
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| T |
28860906 |
attattctaattgacagctatggactgaacacagcctacacaggattgaaatagaacattatgatcaattcaatttgtgccaataataatactagtgatt |
28860807 |
T |
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| Q |
115 |
tagagtaagtaaactcccattttgatttctcaagactaatttttgttgatctaaccatcagattgaaaggtattctgaatttattttttaagaagttact |
214 |
Q |
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| T |
28860806 |
tagagtaagtaaactcccattttgatttctcaagactaatttttgttgatctaaccatcagattgaaaggtattctgaatttattttttaagaagttact |
28860707 |
T |
|
| Q |
215 |
tataactggcctcattnnnnnnnntgtcctattaacattgaacaatgttaagcaaaacataacctatataattagaaagaacctagatacatagatacta |
314 |
Q |
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| T |
28860706 |
tataactggcctcattaaaaaaaatgtcctattaacattgaacaatgttaagcaaaacataacctatataattagaaagaacctagatacatagatacca |
28860607 |
T |
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| Q |
315 |
gtaaaagagaaaagaatattactctccacaaaaatcttgtctcacctcaacctcatccatgtttgaattgtcagaaatcatatgggaaaacatatacatc |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28860606 |
gtaaaagagaaaagaatattactctccacaaaaatcttgtctcacctcaacctcatccatgtttgaattgtcagaaatcatatgggaaaacatatacatc |
28860507 |
T |
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| Q |
415 |
aaataaaagtggacagaaagagagttgaactatgttgctttggattcttcaacaagactttgatttctttcttcattagtaaaaggctgagaagaattcc |
514 |
Q |
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| T |
28860506 |
aaataaaagtggacagaaagagagttgaactatgttgctttggattcttcaacaagactttgatttctttcttcattagtaaaaggctgagaagaattcc |
28860407 |
T |
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| Q |
515 |
taggtggatttt |
526 |
Q |
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| T |
28860406 |
taggtggatttt |
28860395 |
T |
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