View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15360_low_25 (Length: 331)
Name: NF15360_low_25
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15360_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 48965074 - 48965392
Alignment:
| Q |
1 |
ctgcaatagaaatgatgcataagtactttgttggccatgtcgacacgtccaccgttccaacaaaagttgagcacaattcaccaccatctacacaggcaca |
100 |
Q |
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| T |
48965074 |
ctgcaatagaaatgatgcatgagtactttgttggccatgtcgacacgtccaccgttccaacaaaagttgagcacaattcaccaccatctacacaggcaca |
48965173 |
T |
|
| Q |
101 |
aagtgttagggatcaatcatcaggatttgttacaaagacattgcaattcctgttgcctctactcatattggcctttgcgtttgctatgcagcactacgga |
200 |
Q |
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| T |
48965174 |
aagtgttagggatcaatcatcaggatttgttacaaagacattgcaattcctgttgcctctactcatattggcctttgcgtatgctatgcagcactacgga |
48965273 |
T |
|
| Q |
201 |
aaaaagaaacaagtcagcgactcataaaacctgaacttggagcaacaattattttgtgcatgaatcaaatgcattactctgcccaatacaatgcagggct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
48965274 |
aaaaagaaacaagtcagcgactcataaaacctgaacttgaagcaacaattattttgtgcatgaatcaaattcattactctgcccaatacaatgcagggct |
48965373 |
T |
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| Q |
301 |
cttgatgtacgatgatgtc |
319 |
Q |
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|||||||||| |||||||| |
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| T |
48965374 |
cttgatgtactatgatgtc |
48965392 |
T |
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