View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15360_low_9 (Length: 533)

Name: NF15360_low_9
Description: NF15360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15360_low_9
NF15360_low_9
[»] chr3 (20 HSPs)
chr3 (336-525)||(6930894-6931083)
chr3 (341-525)||(45182964-45183148)
chr3 (341-525)||(11018212-11018396)
chr3 (339-525)||(33040934-33041120)
chr3 (345-525)||(27935165-27935345)
chr3 (337-509)||(19565517-19565689)
chr3 (341-525)||(6503569-6503753)
chr3 (367-514)||(6269437-6269584)
chr3 (358-525)||(34084122-34084289)
chr3 (339-509)||(45335856-45336025)
chr3 (358-514)||(19390146-19390302)
chr3 (367-514)||(22968455-22968602)
chr3 (367-514)||(39771799-39771946)
chr3 (358-525)||(40081741-40081905)
chr3 (341-525)||(35514249-35514429)
chr3 (337-395)||(6890977-6891035)
chr3 (380-484)||(5135291-5135397)
chr3 (477-525)||(22922214-22922262)
chr3 (340-387)||(5354691-5354738)
chr3 (491-525)||(5135421-5135455)
[»] chr4 (40 HSPs)
chr4 (337-525)||(3292896-3293084)
chr4 (338-525)||(6690235-6690422)
chr4 (339-525)||(30216742-30216928)
chr4 (341-525)||(43143584-43143768)
chr4 (341-525)||(48989311-48989495)
chr4 (338-523)||(50205079-50205264)
chr4 (358-525)||(25930708-25930875)
chr4 (367-525)||(42333776-42333934)
chr4 (338-507)||(10352902-10353071)
chr4 (375-525)||(44156668-44156818)
chr4 (367-514)||(20129319-20129466)
chr4 (382-525)||(35545977-35546120)
chr4 (358-525)||(36382346-36382512)
chr4 (368-522)||(29319708-29319862)
chr4 (340-512)||(26448035-26448206)
chr4 (367-514)||(26439290-26439437)
chr4 (367-514)||(34407295-34407442)
chr4 (416-525)||(6235578-6235687)
chr4 (341-525)||(29995983-29996167)
chr4 (367-514)||(13012197-13012344)
chr4 (338-525)||(28877250-28877437)
chr4 (367-514)||(47500782-47500929)
chr4 (368-513)||(17511245-17511391)
chr4 (372-514)||(43355918-43356060)
chr4 (371-522)||(40529028-40529179)
chr4 (338-509)||(30077647-30077817)
chr4 (416-525)||(1817775-1817884)
chr4 (436-513)||(13392893-13392970)
chr4 (436-513)||(13396032-13396109)
chr4 (347-484)||(30109945-30110084)
chr4 (370-484)||(48129978-48130087)
chr4 (337-395)||(49908782-49908840)
chr4 (338-395)||(5517494-5517551)
chr4 (341-399)||(7769311-7769369)
chr4 (383-451)||(6254569-6254637)
chr4 (367-443)||(27363370-27363446)
chr4 (491-525)||(30110108-30110142)
chr4 (491-525)||(48130111-48130145)
chr4 (341-458)||(45194159-45194276)
chr4 (338-394)||(6212029-6212085)
[»] chr5 (23 HSPs)
chr5 (338-525)||(31680347-31680534)
chr5 (338-525)||(12278860-12279047)
chr5 (338-525)||(17332551-17332738)
chr5 (338-525)||(31501716-31501903)
chr5 (372-525)||(33430335-33430488)
chr5 (341-525)||(37254624-37254808)
chr5 (373-522)||(10033942-10034091)
chr5 (358-525)||(13817977-13818144)
chr5 (378-522)||(39657509-39657653)
chr5 (358-514)||(39434696-39434852)
chr5 (376-514)||(16155015-16155153)
chr5 (337-525)||(36291350-36291538)
chr5 (389-515)||(16333886-16334012)
chr5 (369-511)||(36293635-36293777)
chr5 (367-524)||(1776377-1776534)
chr5 (367-514)||(26283329-26283476)
chr5 (377-525)||(43068896-43069044)
chr5 (367-525)||(19985948-19986106)
chr5 (367-509)||(3155647-3155789)
chr5 (371-484)||(28801300-28801415)
chr5 (200-273)||(13119778-13119851)
chr5 (338-387)||(26543903-26543952)
chr5 (340-396)||(202621-202677)
[»] chr2 (23 HSPs)
chr2 (338-525)||(45418563-45418750)
chr2 (338-524)||(8147331-8147518)
chr2 (339-525)||(44084603-44084789)
chr2 (376-525)||(12756837-12756986)
chr2 (339-524)||(770975-771165)
chr2 (367-514)||(41251645-41251792)
chr2 (358-515)||(42439986-42440143)
chr2 (367-525)||(31581622-31581780)
chr2 (368-522)||(35962725-35962879)
chr2 (358-522)||(32127144-32127308)
chr2 (367-522)||(18981625-18981780)
chr2 (341-522)||(8059336-8059517)
chr2 (365-522)||(16405607-16405764)
chr2 (367-514)||(17445052-17445197)
chr2 (367-514)||(6403815-6403962)
chr2 (383-522)||(2285887-2286026)
chr2 (358-495)||(2958131-2958267)
chr2 (411-525)||(26162702-26162813)
chr2 (338-484)||(4555250-4555397)
chr2 (338-472)||(26237937-26238071)
chr2 (367-484)||(7072589-7072710)
chr2 (337-387)||(34523219-34523269)
chr2 (491-525)||(4555192-4555226)
[»] chr6 (17 HSPs)
chr6 (338-525)||(28996710-28996897)
chr6 (358-525)||(18339106-18339273)
chr6 (368-522)||(34948761-34948915)
chr6 (337-509)||(29743262-29743434)
chr6 (358-522)||(13837821-13837985)
chr6 (367-514)||(398626-398773)
chr6 (374-525)||(33229336-33229487)
chr6 (127-279)||(21307236-21307385)
chr6 (43-117)||(21310035-21310110)
chr6 (88-279)||(21315974-21316165)
chr6 (338-394)||(13646997-13647053)
chr6 (286-337)||(21141362-21141413)
chr6 (337-443)||(24697899-24698005)
chr6 (344-454)||(31028435-31028545)
chr6 (219-279)||(21309904-21309964)
chr6 (338-394)||(34385519-34385575)
chr6 (202-265)||(21218017-21218080)
[»] chr7 (18 HSPs)
chr7 (341-525)||(34389056-34389240)
chr7 (338-525)||(43184468-43184655)
chr7 (339-525)||(37002144-37002330)
chr7 (338-515)||(8867741-8867918)
chr7 (337-525)||(26624724-26624913)
chr7 (367-525)||(35090177-35090335)
chr7 (338-525)||(33685544-33685731)
chr7 (381-524)||(38638237-38638380)
chr7 (370-522)||(3114099-3114251)
chr7 (358-522)||(5555487-5555651)
chr7 (338-525)||(7002705-7002892)
chr7 (338-525)||(7048576-7048763)
chr7 (377-525)||(40920003-40920151)
chr7 (367-514)||(14777118-14777265)
chr7 (370-525)||(36630828-36630983)
chr7 (358-525)||(8394125-8394292)
chr7 (376-525)||(36658199-36658348)
chr7 (417-484)||(10868514-10868583)
[»] chr8 (15 HSPs)
chr8 (338-525)||(23402088-23402275)
chr8 (367-525)||(16788025-16788183)
chr8 (368-525)||(4404018-4404175)
chr8 (369-525)||(34136825-34136981)
chr8 (358-522)||(15838286-15838449)
chr8 (372-525)||(3648794-3648947)
chr8 (380-525)||(9877242-9877387)
chr8 (370-525)||(29728386-29728541)
chr8 (338-525)||(36408531-36408718)
chr8 (339-513)||(2729208-2729382)
chr8 (390-525)||(42230971-42231104)
chr8 (367-514)||(39914524-39914670)
chr8 (374-484)||(3435285-3435397)
chr8 (491-525)||(40470475-40470509)
chr8 (381-451)||(40470567-40470637)
[»] chr1 (16 HSPs)
chr1 (341-525)||(35907535-35907719)
chr1 (341-525)||(321377-321561)
chr1 (338-524)||(17445293-17445479)
chr1 (341-525)||(3828967-3829150)
chr1 (373-525)||(42310941-42311093)
chr1 (367-522)||(7433454-7433609)
chr1 (358-514)||(32982067-32982223)
chr1 (367-514)||(26144264-26144411)
chr1 (335-484)||(41972314-41972464)
chr1 (337-484)||(33489666-33489815)
chr1 (367-464)||(23313247-23313345)
chr1 (338-394)||(44352614-44352670)
chr1 (339-395)||(31866958-31867014)
chr1 (491-525)||(33489839-33489873)
chr1 (491-525)||(41972256-41972290)
chr1 (338-423)||(48901207-48901291)
[»] scaffold0502 (1 HSPs)
scaffold0502 (358-525)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (377-525)||(52944-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (338-525)||(31460-31647)
[»] scaffold0069 (1 HSPs)
scaffold0069 (377-514)||(17861-17998)
[»] scaffold2142 (1 HSPs)
scaffold2142 (367-514)||(531-678)
[»] scaffold0002 (1 HSPs)
scaffold0002 (367-514)||(480468-480615)
[»] scaffold0016 (2 HSPs)
scaffold0016 (200-269)||(70852-70921)
scaffold0016 (67-95)||(70725-70753)
[»] scaffold0272 (1 HSPs)
scaffold0272 (212-279)||(8769-8836)
[»] scaffold0769 (1 HSPs)
scaffold0769 (340-387)||(1259-1306)


Alignment Details
Target: chr3 (Bit Score: 150; Significance: 5e-79; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 336 - 525
Target Start/End: Complemental strand, 6931083 - 6930894
Alignment:
Q  336 cccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatt 435  Q
    |||||||||||||||||| ||||||||| | || |||||||||||||||||| ||||||||||||||||||   ||||| ||||||||||||||||||||    
T  6931083 cccaggggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatt 6930984  T
Q  436 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6930983 tacaaaaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 11018396 - 11018212
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||||||||||||  |||||||||| |||||||||||| |||||||| |||||||||||| |||||  | |||| |||||||||||||||||| ||||||    
T  11018396 gggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 11018297  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  11018296 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 339 - 525
Target Start/End: Original strand, 33040934 - 33041120
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    ||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||  ||||  |||||| ||||||| |||||||||| ||||    
T  33040934 aggggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttac 33041033  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33041034 aaaaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 345 - 525
Target Start/End: Original strand, 27935165 - 27935345
Alignment:
Q  345 ggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaag 444  Q
    ||||||||| || ||| || |||||| |||||||||||||||| |||||||||||| |||||  |||||| |||||||  ||||||||| ||||||||||    
T  27935165 ggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaag 27935264  T
Q  445 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  27935265 aaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 337 - 509
Target Start/End: Complemental strand, 19565689 - 19565517
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    ||||||||||||||||| ||||||||  | ||||||||||||||| || || |||||||||||| |||||  ||||||  ||||  | ||||||||||||    
T  19565689 ccaggggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacattt 19565590  T
Q  437 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 509  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19565589 acaaaaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 6503753 - 6503569
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||||||||||||  |||||||| | ||||||||||||||||||||| ||| ||||||||  ||||  | |||| ||||||||||||| |||| ||||||    
T  6503753 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaa 6503654  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| | |||||||||    
T  6503653 aaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 6269584 - 6269437
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||| |||| |||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6269584 gggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 6269485  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  6269484 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 6269437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 358 - 525
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||||||| |||||| |||||||||||| |||||    ||||  ||||| | |||||||||||||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    || |||||||| |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 339 - 509
Target Start/End: Original strand, 45335856 - 45336025
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    ||||||||||||||| |||||||||   |||||||||||||| ||| || |||||||||| | |||||  ||||||  ||||| || |||||||||||||    
T  45335856 aggggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttac 45335954  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 509  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  45335955 aaaaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacacta 45336025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 358 - 514
Target Start/End: Original strand, 19390146 - 19390302
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||||||| ||||| ||||| |||||||||||| |||||  | ||||  ||||| | |||||||||||||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgac 19390302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 22968602 - 22968455
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||| ||||||||||| |||||||||||| |||||  |  ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  22968602 gggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctaaaaa 22968503  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| | ||||||||||||||||||||||||    
T  22968502 ttgtcacacgtaaataggtcttgaaattttatttagcacactattgac 22968455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 39771799 - 39771946
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||| | |||||||||||| |||||  | |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  39771799 gggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaa 39771898  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  39771899 ttgtcacacgtaaataggtcttgaaattttatttgacacactattgac 39771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 358 - 525
Target Start/End: Complemental strand, 40081905 - 40081741
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||||||||  ||||||||||||||||| |||||||||||  |||||  | |||| |||||||  |||||||||||||||||||||||||||||||||    
T  40081905 ggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaac-caaaagctcattaacacatttacaaaaagaaaaatttgggca 40081808  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    || |||||||| |||||||||||||| ||| || ||||| |||||||||||||||||| |||||||||    
T  40081807 atttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 35514249 - 35514429
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||| |||||||| ||||||||| | || |||||| ||||||||||| ||||||||| ||  | ||   ||||| |||||| | |||||||||    |||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caa 35514344  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| |||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 395
Target Start/End: Original strand, 6890977 - 6891035
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatt 395  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||    
T  6890977 ccaggggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  380 ggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgc 477  Q
    |||||||| ||| |||||||  |||||  ||||||  ||||||  ||||||||| |||||||||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  478 aaatagg 484  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 525
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  477 caaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 5354691 - 5354738
Alignment:
Q  340 ggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgat 387  Q
    ||||| |||||||| ||||||||| | |||||||||||||||||||||    
T  5354691 ggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgat 5354738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 4e-76; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 337 - 525
Target Start/End: Complemental strand, 3293084 - 3292896
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    ||||||||||||||||| ||| | ||| | ||||||||||||||||||||| |||||||||||| |||||  |||||| |||||||||||||||||| ||    
T  3293084 ccaggggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacactt 3292985  T
Q  437 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3292984 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 6690422 - 6690235
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||| |||    
T  6690422 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacactta 6690323  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  6690322 caaaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 339 - 525
Target Start/End: Complemental strand, 30216928 - 30216742
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    |||||||| ||||||  |||||||| | ||||||||||||||||||||| |||||||||||| |||||  |||||| ||||||| |||||||||| ||||    
T  30216928 aggggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttac 30216829  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  30216828 aaaaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 43143768 - 43143584
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||||||||||||  ||| |||| | ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||||||||||||| ||||||    
T  43143768 gggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 43143669  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  43143668 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 48989311 - 48989495
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||| |||||||| |||| |||||| ||||||||  ||||| ||||| |||||||||||| |||||  ||||||||||||| | ||||||||| ||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 338 - 523
Target Start/End: Complemental strand, 50205264 - 50205079
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    ||||||||||||||||  |||||||  | ||||||||||||| ||||||| |||||||||||| |||||   ||||| |||||||||||||||||| |||    
T  50205264 caggggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacactta 50205165  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatc 523  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  50205164 caaaaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 358 - 525
Target Start/End: Original strand, 25930708 - 25930875
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| |||||||||||||||||||||||  ||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||||||||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 25930807  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    || |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  25930808 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 367 - 525
Target Start/End: Complemental strand, 42333934 - 42333776
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||| |||||||| || |||||||||||| |||||  | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42333934 gggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 42333835  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  42333834 ttctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctc 42333776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 338 - 507
Target Start/End: Complemental strand, 10353071 - 10352902
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    ||||||||||||||||  |||||||| |  ||||||||||||||||| || |||||||||||| |||||  ||||||  ||||| | |||||||||||||    
T  10353071 caggggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacattta 10352972  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 507  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10352971 caaaaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 375 - 525
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  375 gcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcaca 474  Q
    |||||||||| |  |||||||||||| |||||  |||||| |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  475 cgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 20129319 - 20129466
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20129319 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 20129418  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| ||||||||||  ||||||||||| |||||||||||||    
T  20129419 ttgtcacacgtaaataggtcttagaattttatttggcacactattgac 20129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 382 - 525
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  382 ctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 481  Q
    |||||| || ||||||||||||| |  |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  482 aggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
     |||||| |||||||||||||||||||||||| | |||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 358 - 525
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||||||||||||||  ||||||||||| |||||  | ||||  ||||| | |||||||||||||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 368 - 522
Target Start/End: Complemental strand, 29319862 - 29319708
Alignment:
Q  368 ggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 467  Q
    |||||||| || |||||||| |||||||||||| |||||  | |||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||    
T  29319862 ggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaatttgagcaatctgaaaat 29319763  T
Q  468 tctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    | |||||| |||||| |||| ||||||||||||||||||||||||||| ||||||    
T  29319762 tgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 512
Target Start/End: Original strand, 26448035 - 26448206
Alignment:
Q  340 ggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttaca 439  Q
    |||||||||||||| ||||||||||| | ||| ||| |||| |||||| |||||||||||| |||||   | ||| |||||| | ||||||||| |||||    
T  26448035 ggggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttaca 26448134  T
Q  440 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattg 512  Q
    |||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  26448135 aaaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 26439437 - 26439290
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||| | |||||||||||| |||||  | |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26439437 gggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaa 26439338  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  26439337 ttgtcacacgtaaataggtcttgaaattttatttgacacactattgac 26439290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 34407442 - 34407295
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||| | |||||||||||| |||||  | |||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  34407442 gggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaa 34407343  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| | ||||||||||  ||||||||||||    
T  34407342 ttgtcacacgtaaataggtcttgaaattttatttgacacactattgac 34407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 416 - 525
Target Start/End: Original strand, 6235578 - 6235687
Alignment:
Q  416 caaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 515  Q
    |||||| | ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  6235578 caaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacg 6235677  T
Q  516 agttcatctc 525  Q
     |||||||||    
T  6235678 ggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||||| |||| |||  | || |||||| |||| |||||| |||||||||||  |||||  | ||||  ||||| | |||||||||||||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||  ||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 13012197 - 13012344
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||    ||||  ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  13012197 gggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 13012296  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  13012297 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 13012344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 28877437 - 28877250
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    ||||||||||||||||  |||  ||| | | ||||||||  ||||| ||| |||||||||||| |||||    ||||  |||||| |||||||||  |||    
T  28877437 caggggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgctta 28877338  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
     ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  28877337 taaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 47500782 - 47500929
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  |||||||||||||  |||||||||||||||||||| ||||||    
T  47500782 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaagaaaaatttgggcaatttgaaaa 47500881  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  47500882 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 47500929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 368 - 513
Target Start/End: Complemental strand, 17511391 - 17511245
Alignment:
Q  368 ggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 467  Q
    ||||||||||| | |||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  468 tctcacacgcaaataggtctcgg-aattttatttagcacactattga 513  Q
    | | |||||||||||||||| || |||||||||||||||| ||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattga 17511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 372 - 514
Target Start/End: Original strand, 43355918 - 43356060
Alignment:
Q  372 gtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctc 471  Q
    |||||||||||||| | |||||||||||| |||||  | |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  43355918 gtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttgggcaatctgaaaattgtc 43356017  T
Q  472 acacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    ||||| |||||||||| | ||||||||||  ||||||||||||    
T  43356018 acacgtaaataggtcttgaaattttatttgacacactattgac 43356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 371 - 522
Target Start/End: Original strand, 40529028 - 40529179
Alignment:
Q  371 ggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattct 470  Q
    ||||| |||| |||||| |||||||||||| |||||  | ||||  |||| |  |||||||||||||||||||||||||||||| |||| |||||||| |    
T  40529028 ggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaatttggacaatttgaaaattgt 40529127  T
Q  471 cacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  40529128 cacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 338 - 509
Target Start/End: Complemental strand, 30077817 - 30077647
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| |||| ||||   |||||||||||| ||||| || ||||| |||||| |||||  ||||||  |||||   |||||||||||||    
T  30077817 caggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacattta 30077719  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 509  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||||||| | |||||||||||||||||||    
T  30077718 caaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacacta 30077647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 416 - 525
Target Start/End: Original strand, 1817775 - 1817884
Alignment:
Q  416 caaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 515  Q
    |||||| | ||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| ||    
T  1817775 caaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaattttatttaacacactattgtcg 1817874  T
Q  516 agttcatctc 525  Q
      ||||||||    
T  1817875 gattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 436 - 513
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  436 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 513  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 436 - 513
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  436 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 513  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 347 - 484
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  347 tttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaa 446  Q
    ||||||| |||| |||| | || ||||||||||| |||||| |||||||||||| |||||  |||||  | |||| | ||||||||| ||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  447 aaatttgggc--aatctgaaaattctcacacgcaaatagg 484  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 370 - 484
Target Start/End: Original strand, 48129978 - 48130087
Alignment:
Q  370 cggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattc 469  Q
    |||||| ||||||||||| ||||||||||||  ||||  |||||| |||||||  ||||||||| |||||||||||||||||||||     |||||| ||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg-----tgaaaactc 48130072  T
Q  470 tcacacgcaaatagg 484  Q
    |||||||||||||||    
T  48130073 tcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 49908840 - 49908782
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatt 395  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||    
T  49908840 ccaggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 395
Target Start/End: Complemental strand, 5517551 - 5517494
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatt 395  Q
    |||||||||||||||| ||||||||| | ||||||||||| ||||||||| |||||||    
T  5517551 caggggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 399
Target Start/End: Original strand, 7769311 - 7769369
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttg 399  Q
    |||||||||||||  |||||||| |  |||||||||||||||||||| |||||||||||    
T  7769311 gggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  383 tcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatt 451  Q
    ||||| |||||||||||| |||||  |||||| |||||| ||||||||||| || |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 443
Target Start/End: Original strand, 27363370 - 27363446
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaa 443  Q
    ||||||||||||||||||||| ||   |||||||  ||||  |||||| |||||||| ||||||||| |||||||||    
T  27363370 gggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 458
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||| |||||||| |||| |||| |  |||| | |||||| ||||||  ||||||||||| |||||  | |||| |||||| | ||||||||| ||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  441 aaagaaaaatttgggcaa 458  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 6212085 - 6212029
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataat 394  Q
    ||||||||||||||||  ||||||||   ||||||||||||| ||||||| ||||||    
T  6212085 caggggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 2e-75; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 31680347 - 31680534
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||||||||||| |||    
T  31680347 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacactta 31680446  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31680447 caaaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 12279047 - 12278860
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||  | |||||||||||||| |||||| |||||||||||| |||||  |||||| |||| ||||||||||||| |||    
T  12279047 caggggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacactta 12278948  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  12278947 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 17332738 - 17332551
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||||||| ||||||||||||  ||||  |||||| |||||||||||||||||| |||    
T  17332738 caggggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacactta 17332639  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17332638 caaaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 31501903 - 31501716
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||| | ||||||||||||| |||||||||||| |||||  |||||| |||||||||||||||||| |||    
T  31501903 caggggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacactta 31501804  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  31501803 caaaaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 372 - 525
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  372 gtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctc 471  Q
    |||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  472 acacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 37254624 - 37254808
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||||| | ||||||| |  ||||||||||| |||||||| |||||||||||| |||||  |||||| |||||| ||||||||||| ||||||    
T  37254624 gggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaa 37254723  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  37254724 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 373 - 522
Target Start/End: Original strand, 10033942 - 10034091
Alignment:
Q  373 tcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctca 472  Q
    ||||||||||||||| |||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  10033942 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 10034041  T
Q  473 cacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  10034042 cacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 358 - 525
Target Start/End: Original strand, 13817977 - 13818144
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||| |||||||||| |||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||||||||||||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 13818076  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| | |||||||    
T  13818077 atctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 378 - 522
Target Start/End: Complemental strand, 39657653 - 39657509
Alignment:
Q  378 cgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgc 477  Q
    ||||||||||||||||||||||| |||||  | |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39657653 cgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgc 39657554  T
Q  478 aaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  39657553 aaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 358 - 514
Target Start/End: Original strand, 39434696 - 39434852
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| ||||||||||||||||||||||| |||||||||| | |||||  | |||| |||||||| |||||||||||||||||| ||||||||||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatgaaaaatttgggca 39434795  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    ||||||||||| ||||| | ||||||||||  |||||||||||||||||||||||||    
T  39434796 atctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgac 39434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 376 - 514
Target Start/End: Original strand, 16155015 - 16155153
Alignment:
Q  376 cccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 475  Q
    |||||||||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  476 gcaaataggtctcggaattttatttagcacactattgac 514  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattgac 16155153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 337 - 525
Target Start/End: Original strand, 36291350 - 36291538
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    ||||||||||||||||| |||| |||||| ||||||||| ||||| |||||  ||||||||||| |||||   | |||  |||||   ||||||||||||    
T  36291350 ccaggggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacattt 36291449  T
Q  437 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| ||||||||||||| |||||||||    
T  36291450 acaaaaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 389 - 515
Target Start/End: Complemental strand, 16334012 - 16333886
Alignment:
Q  389 gataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctc 488  Q
    |||||||||||| |||||    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  16334012 gataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtctt 16333913  T
Q  489 ggaattttatttagcacactattgacg 515  Q
    |||||||||||||||||||||||||||    
T  16333912 ggaattttatttagcacactattgacg 16333886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 369 - 511
Target Start/End: Complemental strand, 36293777 - 36293635
Alignment:
Q  369 gcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 468  Q
    ||||||| |||| |||||| |||||||||||  |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36293777 gcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 36293678  T
Q  469 ctcacacgcaaataggtctcggaattttatttagcacactatt 511  Q
     ||||||| |||||||||| |||||||||||||||||||||||    
T  36293677 gtcacacgtaaataggtcttggaattttatttagcacactatt 36293635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 367 - 524
Target Start/End: Complemental strand, 1776534 - 1776377
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||  |||||    ||||  ||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  1776534 gggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaa 1776435  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatct 524  Q
    || |||||||||||||||||| |||||||||||||||||||||| |||  ||||||||    
T  1776434 ttgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 26283476 - 26283329
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  |||||   ||||||||||||| ||||||||||||||||||||||||||||    
T  26283476 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaa 26283377  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  26283376 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 26283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 377 - 525
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  377 ccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 476  Q
    |||||||||||  ||||||||| | |||||  |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  477 caaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
     ||||| ||||||||||||||||||||||||||||| ||  ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 525
Target Start/End: Original strand, 19985948 - 19986106
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||| ||| ||||||| |||||||||||| |||||    |||| |||||| | |||| |||||||||||||||||||||||||| ||||| ||||    
T  19985948 gggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaatctaaaaa 19986047  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    || |||||||||||||||||| | ||||||||||| ||||||||||||  |||||||||    
T  19986048 ttatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 367 - 509
Target Start/End: Complemental strand, 3155789 - 3155647
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    |||||||||| ||||||||||  ||||||||||| ||||   | ||||  ||||| | ||||||||||||| |||||||||||||||| |||||||||||    
T  3155789 gggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaagaaaaatttggacaatctgaaaa 3155690  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacacta 509  Q
    || |||||||||||||| ||| |||||||||||||||||||||    
T  3155689 ttgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 484
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  371 ggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttggg--caatctgaaaatt 468  Q
    |||||||| |||||||| |||||||||||| |||||   ||||  |||||||| ||||||||| |||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  469 ctcacacgcaaatagg 484  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 13119851 - 13119778
Alignment:
Q  200 gcaagaaaagaggcactaaaaatagtcccatttcgatggaaagaaatgctatgatagtggttatatagttcaaa 273  Q
    |||||||||| |||||||||||| || |||  ||||   |||||||||||||||||||| ||||||||||||||    
T  13119851 gcaagaaaaggggcactaaaaattgttccacctcgaccaaaagaaatgctatgatagtgtttatatagttcaaa 13119778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 26543952 - 26543903
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgat 387  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  26543952 caggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 26543903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 202621 - 202677
Alignment:
Q  340 ggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataattt 396  Q
    |||||||||||||| |||| |||| || || ||||||||||||||||| ||||||||    
T  202621 ggggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataattt 202677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 45418563 - 45418750
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||| |||    
T  45418563 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacactta 45418662  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  45418663 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

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Target: chr2; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 338 - 524
Target Start/End: Original strand, 8147331 - 8147518
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||| ||||| |||||  ||||||||||||| ||||||||||| |||    
T  8147331 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacactta 8147430  T
Q  438 caaaaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatct 524  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  8147431 caaaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

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Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 339 - 525
Target Start/End: Complemental strand, 44084789 - 44084603
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    ||||||||||||||| ||||||||| | |||| |||||||||||||||| |||||||||||| |||||  |||||  ||||||   ||||||||| ||||    
T  44084789 aggggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttac 44084690  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  44084689 aaaaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

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Target: chr2; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 376 - 525
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  376 cccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 475  Q
    |||||| ||||| ||||||||||||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  476 gcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

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Target: chr2; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 339 - 524
Target Start/End: Original strand, 770975 - 771165
Alignment:
Q  339 aggggcggtttcaccacccggcgact-----ctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacaca 433  Q
    ||||||||||||||| |||||||||      | ||||||||||||||||||||| ||||| |||||| |||||  ||||||  ||||||| |||||||||    
T  770975 aggggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacaca 771074  T
Q  434 tttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatct 524  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  771075 cttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

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Target: chr2; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 41251792 - 41251645
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41251792 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 41251693  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  41251692 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 41251645  T

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Target: chr2; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 358 - 515
Target Start/End: Original strand, 42439986 - 42440143
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||||||||||||||||||| |||||||||||| |||||  |  ||| |||||||| |||||||||||||||||||||||||||||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaatttgggca 42440085  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 515  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||    
T  42440086 atctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacg 42440143  T

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Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 367 - 525
Target Start/End: Complemental strand, 31581780 - 31581622
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    |||||||||||| |||||||  |||| |||||||  ||||  | || | |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31581780 gggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 31581681  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  31581680 ttgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

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Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 368 - 522
Target Start/End: Original strand, 35962725 - 35962879
Alignment:
Q  368 ggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 467  Q
    |||||||| ||||||||||| |||||||||||| |||||  | |||| |||||||  |||||||||||||||||||||||| ||||||||||||||||||    
T  35962725 ggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaattttgggcaatctgaaaat 35962824  T
Q  468 tctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    | |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35962825 tgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

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Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 358 - 522
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||||||||||||||  ||||||||||| |||||  | | || |||||||  |||||||||||||||||||||||||||| ||||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaatttaggca 32127209  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  32127208 atctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

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Target: chr2; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 367 - 522
Target Start/End: Original strand, 18981625 - 18981780
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||| |||||||||||||||||||||||| |||||  | |||| |||||| | ||||| ||||||||||||||||||||||||||||| | ||||    
T  18981625 gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaatttgggcaatttaaaaa 18981724  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    || |||||||||||||||||| |||||||||||||||||||| |||||| ||||||    
T  18981725 ttgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

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Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 341 - 522
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||||| |||| |||| | || || |||||| ||||| || |||||||||||| |||||    |||| |||||||||||||||||| ||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

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Target: chr2; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 365 - 522
Target Start/End: Original strand, 16405607 - 16405764
Alignment:
Q  365 ctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaa 464  Q
    |||||||||||||||||||| || |||||||||||| | |||  | |||| |||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  16405607 ctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatctgaa 16405706  T
Q  465 aattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    |||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  16405707 aattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

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Target: chr2; HSP #14
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 17445197 - 17445052
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||| ||||||| |||||||||||| |  ||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17445197 gggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 17445100  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  17445099 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 17445052  T

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Target: chr2; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 6403962 - 6403815
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  |||||   ||||||||||||| ||||||||||||||||||||||||||||    
T  6403962 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaagaaaaatttgggcaatctgaaaa 6403863  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  6403862 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 6403815  T

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Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 383 - 522
Target Start/End: Original strand, 2285887 - 2286026
Alignment:
Q  383 tcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 482  Q
    ||||| |||||||||||| |||||   |||||  ||||| | |||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  483 ggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||| | ||||||||||||||||||||||||||| ||||||    
T  2285987 ggttttggaattttatttagcacactattgacgtgttcat 2286026  T

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Target: chr2; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||||||| ||||||||||| ||||||||| || |||||  | |||| |||||||| ||||||||||||||||| ||||||||||||| |    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatttacaaagagaaaaatttgggta 2958169  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattt 495  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  2958168 atctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

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Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 411 - 525
Target Start/End: Complemental strand, 26162813 - 26162702
Alignment:
Q  411 caactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactat 510  Q
    |||| ||||| || ||||||||| ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||   |||||||||||| |||    
T  26162813 caacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtctcgga---ttatttagcacattat 26162717  T
Q  511 tgacgagttcatctc 525  Q
    ||||| |||||||||    
T  26162716 tgacgggttcatctc 26162702  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 484
Target Start/End: Complemental strand, 4555397 - 4555250
Alignment:
Q  338 caggggcggtttcaccacccggcgactct-gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    |||||| |||| |||| |||||||| ||| ||||||||||  || |||||| |||||||||||| ||| |  |||||| |||||||   |||||||| ||    
T  4555397 caggggtggttccaccgcccggcga-tctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacactt 4555300  T
Q  437 acaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 484  Q
    |||||||||||| |||||||  |||||||||||||||||||| |||||||    
T  4555299 acaaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

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Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 472
Target Start/End: Original strand, 26237937 - 26238071
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||| ||||| ||  ||||||||| | ||||||||||||||||||||| |||| |||||||  ||||    |||  |||||| | ||||||||| |||    
T  26237937 caggggtggttttacagcccggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacactta 26238035  T
Q  438 caaaaagaaaaatttgggc-aatctgaaaattctca 472  Q
    ||||||||||||||||||| |||||||||| |||||    
T  26238036 caaaaagaaaaatttgggcaaatctgaaaactctca 26238071  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaatta--acacatttacaaaaagaaaaatttgggcaa--tctg 462  Q
    ||||||||||||||||||||| ||||||||||   |||||  | |||| |||||||| ||||  ||||| ||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  463 aaaattctcacacgcaaatagg 484  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 34523219 - 34523269
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgat 387  Q
    ||||||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  34523219 ccaggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 34523269  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 4555226 - 4555192
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||| |||||||||||||||||||||||    
T  4555226 aattttatttaccacactattgacgagttcatctc 4555192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 4e-73; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 28996710 - 28996897
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||| ||||||| ||||||||||||||||||  ||||||  ||||| ||||||||||| |||    
T  28996710 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacactta 28996809  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28996810 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 358 - 525
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||||||||||||||  ||||||||||| |||||  |||||   ||||||||||||||||| |||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 368 - 522
Target Start/End: Complemental strand, 34948915 - 34948761
Alignment:
Q  368 ggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 467  Q
    ||||||||||| |||||||| |||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34948915 ggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 34948816  T
Q  468 tctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    | |||||| ||||||| ||| | ||||||||||||||||||||||||| ||||||    
T  34948815 tgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 337 - 509
Target Start/End: Original strand, 29743262 - 29743434
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    |||||||||||||||||  ||| |||  | ||||||| |||||||||| || |||||||||||| |||||  ||||||  |||||   ||||||||||||    
T  29743262 ccaggggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacattt 29743361  T
Q  437 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 509  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29743362 acagaaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 29743434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 358 - 522
Target Start/End: Original strand, 13837821 - 13837985
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||| |||| |||| ||||| |||||||||||  |||||  | |||| |||||||  || ||||||||||||||||||||||||||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaatttgggca 13837920  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13837921 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 398626 - 398773
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  398626 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 398725  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  398726 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 374 - 525
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  374 cgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcac 473  Q
    |||||||||||||| ||| |||||||  |||||  |||||| |||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  474 acgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||| ||||| ||||||| ||||||||||||||||||||| ||  ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 127 - 279
Target Start/End: Complemental strand, 21307385 - 21307236
Alignment:
Q  127 tagtaagattatgtgttgttgcctgaagtgaattcttcttttatgttccatttgaactgaaacttnnnnnnnngcaagaaaagaggcactaaaaatagtc 226  Q
    ||||||||||||| |||||||| | ||||||||||||||||| |||||||| | |||||||||||        |||||| ||| || |||||||||||||    
T  21307385 tagtaagattatgagttgttgcttaaagtgaattcttcttttttgttccatctaaactgaaactt---aaaaagcaagataagggggactaaaaatagtc 21307289  T
Q  227 ccatttcgatggaaagaaatgctatgatagtggttatatagttcaaaatatct 279  Q
    ||| || ||  ||||||||| |||| |||||||||||||| |||||| |||||    
T  21307288 ccactttgaccgaaagaaatactataatagtggttatatacttcaaagtatct 21307236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 21310110 - 21310035
Alignment:
Q  43 ttaatgtaaagtgatcttacttaattataatgtaaagtgaattactcactttaaaagagcatggtt-aatggataa 117  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  21310110 ttaatgtaaagtgatattacttatttataatgtaaagtgaattactcactttaaatgagcatgattcaatggataa 21310035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 279
Target Start/End: Complemental strand, 21316165 - 21315974
Alignment:
Q  88 tcactttaaaagagcatggtt-aatggataa-tgttt-tcaatagtaagattatgtgttgttgcctgaagtgaattcttcttttatgttccatttgaact 184  Q
    ||||||||||||||||| ||| ||||||||| ||||| |  |||||||||||||| |||||||| | ||||||||||||||||| |||||||| || | |    
T  21316165 tcactttaaaagagcatcgttcaatggataaatgtttgtttatagtaagattatgagttgttgcttaaagtgaattcttcttttttgttccatctggatt 21316066  T
Q  185 gaaacttnnnnnnnngcaagaaaagaggcactaaaaatagtcccatttcgatggaaagaaatgctatgatagtggttatatagttcaaaatatct 279  Q
    |||||||        ||| |||||  |  ||||||||||||| ||| ||||  |||||||||||||||||| || ||||||| |||||| |||||    
T  21316065 gaaactt---aaaaagcatgaaaaatgatactaaaaatagtctcatctcgaccgaaagaaatgctatgataatgtttatatacttcaaagtatct 21315974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 13646997 - 13647053
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataat 394  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  13646997 caggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 286 - 337
Target Start/End: Complemental strand, 21141413 - 21141362
Alignment:
Q  286 ttcatgttggtaggaaaacatagttctagtgacaaaaccacattgttctacc 337  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  21141413 ttcatgttggcaggaaaacataggtctagtgacaaaaccacattgttctacc 21141362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 443
Target Start/End: Complemental strand, 24698005 - 24697899
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    |||| |||||||||||| ||||||||| | || |  |||||||||||| || |||||||||| | |||||  |||||| |||||||| ||||||||| ||    
T  24698005 ccagtggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacactt 24697906  T
Q  437 acaaaaa 443  Q
    |||||||    
T  24697905 acaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 454
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  344 cggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaa 443  Q
    |||||||||| ||||||||| | | ||||| |||||| |||||| |||||||||||| |||||   |||||  ||||||  |||||||||||||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  444 gaaaaatttgg 454  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 21309964 - 21309904
Alignment:
Q  219 aaatagtcccatttcgatggaaagaaatgctatgatagtggttatatagttcaaaatatct 279  Q
    |||||||||||  || || ||| |||||||||||| |||||||||||| ||||||||||||    
T  21309964 aaatagtcccacctccatcgaatgaaatgctatgacagtggttatatacttcaaaatatct 21309904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 34385575 - 34385519
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataat 394  Q
    |||||||||||||||| ||||||||| | ||||||| |||| |||||||| ||||||    
T  34385575 caggggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 21218080 - 21218017
Alignment:
Q  202 aagaaaagaggcactaaaaatagtcccatttcgatggaaagaaatgctatgatagtggttatat 265  Q
    |||||||| | |||||||||||||||||  ||||  ||| ||||||||||||||||| ||||||    
T  21218080 aagaaaagggacactaaaaatagtcccacctcgaccgaaggaaatgctatgatagtgcttatat 21218017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 34389240 - 34389056
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||| ||||||| ||||||||| | ||||||||||||||||||||| |||||||||||| |||||  |||||| ||||||| |||||||||| ||||||    
T  34389240 gggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 34389141  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  34389140 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 338 - 525
Target Start/End: Complemental strand, 43184655 - 43184468
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| |||||||| || |||||||||| |||||||||| |||||||||| ||||| |  |  ||| |||||||||||||||| | |||    
T  43184655 caggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatactta 43184556  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  43184555 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 339 - 525
Target Start/End: Complemental strand, 37002330 - 37002144
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    ||||||||||||||| ||||||||| | |||||||||  ||| |||||| |||||||||||| |||||  |||||  |||||| ||||||||||| ||||    
T  37002330 aggggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttac 37002231  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  37002230 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 338 - 515
Target Start/End: Complemental strand, 8867918 - 8867741
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||  ||||  |||||  |||||||||||||| |||||||    
T  8867918 caggggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacattta 8867819  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacg 515  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8867818 caaaaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacg 8867741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 337 - 525
Target Start/End: Original strand, 26624724 - 26624913
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgatt-gataatttttgcgcattattcccaactcaaaagccaattaacacatt 435  Q
    ||||||||||||||||| |||||| || | ||||||||||| |||||||||| ||||||||||||  ||||  |||||  ||||||  |||||||||| |    
T  26624724 ccaggggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacact 26624823  T
Q  436 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26624824 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 367 - 525
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    |||||||||||||||||||||  ||||||||||| |||||  |||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 33685544 - 33685731
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| |  ||| ||||| |||||||||| |||||||||||| |||||  |||||| |||||||| ||||||||| |||    
T  33685544 caggggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacactta 33685643  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||| ||| |||||    
T  33685644 caaaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 381 - 524
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  381 gctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 480  Q
    |||||||||||||||||||| |||||   ||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  481 taggtctcggaattttatttagcacactattgacgagttcatct 524  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 370 - 522
Target Start/End: Complemental strand, 3114251 - 3114099
Alignment:
Q  370 cggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattc 469  Q
    |||||||||||||||||| |||||||||||| |||||  | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  3114251 cggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 3114152  T
Q  470 tcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  3114151 tcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 358 - 522
Target Start/End: Original strand, 5555487 - 5555651
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||| |||||| ||||||||||||||||||||||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaatttgggca 5555586  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5555587 atctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 7002705 - 7002892
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | | ||||||||||||||||||| ||  ||||||   |||||  |||||| ||||||||||||||||||  ||    
T  7002705 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7002804  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  7002805 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 7048576 - 7048763
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | | ||||||||||||||||||| ||  ||||||   |||||  |||||| ||||||||||||||||||  ||    
T  7048576 caggggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacata 7048675  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  7048676 caaaaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 377 - 525
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  377 ccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 476  Q
    ||||||||||| |||||||||||| |||||     ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  477 caaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 14777265 - 14777118
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  14777265 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 14777166  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| ||||||||||||||||||||||||||    
T  14777165 ttgtcacacgtaaataggtcttggaattttatttagcacactattgac 14777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 370 - 525
Target Start/End: Original strand, 36630828 - 36630983
Alignment:
Q  370 cggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattc 469  Q
    |||||||||||||||||| |||||||||||| |||||  | ||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||||     
T  36630828 cggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 36630927  T
Q  470 tcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  36630928 tcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 358 - 525
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||| | |||||||||||||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 376 - 525
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  376 cccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacac 475  Q
    ||||| |||||| |||||||||||| ||||   ||||||  ||||||||||||||| | | ||||||| |||||||||||||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  476 gcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  417 aaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 484  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 6e-66; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 23402088 - 23402275
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||| |||||  ||||  |||||| |||||||||||||||||| |||    
T  23402088 caggggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacactta 23402187  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||    
T  23402188 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 367 - 525
Target Start/End: Complemental strand, 16788183 - 16788025
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  16788183 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatcttaaaa 16788084  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16788083 ctctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 368 - 525
Target Start/End: Original strand, 4404018 - 4404175
Alignment:
Q  368 ggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaat 467  Q
    |||||||||||||||||||| |||||||||||| |||||  | |||| |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  4404018 ggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctaaaaat 4404117  T
Q  468 tctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  4404118 tctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 369 - 525
Target Start/End: Complemental strand, 34136981 - 34136825
Alignment:
Q  369 gcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaatt 468  Q
    ||||||||||||||||||| |||||||||||| |||||  | |||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  34136981 gcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaatt 34136882  T
Q  469 ctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||||    
T  34136881 ctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 358 - 522
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||| ||||||||||||||||||||||||| |||||  | ||||  ||||| | |||||||||||||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 372 - 525
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  372 gtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctc 471  Q
    |||||||||||||||| |||||||||| | |||||  | |||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  472 acacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||| ||||| | ||||||||||||||||||||||||||| |||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 380 - 525
Target Start/End: Original strand, 9877242 - 9877387
Alignment:
Q  380 ggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 479  Q
    ||||||||||||||||||||| |||||  || ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  480 ataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||| |||||||||||||||||||||| | | ||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattgtcaaattcatctc 9877387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 370 - 525
Target Start/End: Complemental strand, 29728541 - 29728386
Alignment:
Q  370 cggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattc 469  Q
    |||||||||| ||||||| ||||| |||||| |||||  | |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||     
T  29728541 cggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggcaatctgaaaattg 29728442  T
Q  470 tcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    | ||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  29728441 tgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 36408531 - 36408718
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||| ||||||||| |||||||||   ||||||||||||||||||||| |||||||||||| |||||   ||||| |||||| | |||||||||||||    
T  36408531 caggggtggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacattta 36408630  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||  ||||||||    
T  36408631 caaaaagaaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 339 - 513
Target Start/End: Complemental strand, 2729382 - 2729208
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttac 438  Q
    ||||||||||||||| ||||||||| | |||||| |||||||||||||| |||||||||| | |||||   ||||  |||||||| ||||||||| |||     
T  2729382 aggggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttat 2729283  T
Q  439 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 513  Q
    |||||||||  ||| |||||| |||||| ||||| |||||||||||||||  |||||||||||||||||||||||    
T  2729282 aaaaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattga 2729208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 390 - 525
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  390 ataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 489  Q
    ||||||||||| |||||   |||||||||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  490 gaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||  ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 39914524 - 39914670
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  ||||||||||||| ||||| ||||||||||||||| ||||||    
T  39914524 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa-aaaaatttgggcaatttgaaaa 39914622  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||| | |||||||||| |||||||||||| |||||||||||||    
T  39914623 ttgtcacaagtaaataggtcttggaattttatttggcacactattgac 39914670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 374 - 484
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  374 cgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggc--aatctgaaaattctc 471  Q
    |||||||||| ||| |||||||||||| |||||  |||||| ||||| || ||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  472 acacgcaaatagg 484  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 451
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  381 gctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatt 451  Q
    ||||||| |||||||||||| |||||  ||||| ||||||| | ||||||||| ||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 9e-62; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 35907535 - 35907719
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||||| |||||||||   ||||||||||||||||| ||| |||||||||||| |||||  |||||| |||||||||||||  ||| ||||||    
T  35907535 gggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaa 35907634  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35907635 aaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 341 - 525
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    |||||||||||||||||||||| |  ||||||||| ||||||||||| ||||||||||| ||||||   ||||| |||||| | ||||||||| ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 338 - 524
Target Start/End: Original strand, 17445293 - 17445479
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    ||||||||||||||   ||||||||| |   ||||||||||||||| |||  ||||||||||  |||||   ||||| |||||| ||||||||||| |||    
T  17445293 caggggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacactta 17445392  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatct 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  17445393 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 341 - 525
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  341 gggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaa 440  Q
    ||||||||||| |||||||| || | || ||||||| |||| ||||| |||||||||||| |||||  |||||| ||||||   ||||||||| ||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  441 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 373 - 525
Target Start/End: Complemental strand, 42311093 - 42310941
Alignment:
Q  373 tcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctca 472  Q
    ||||||||||||||| |||||||||||| |||||  | |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  42311093 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtca 42310994  T
Q  473 cacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    |||||||||| |||| | |||||||||||| || ||||||||| |||||||||    
T  42310993 cacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 367 - 522
Target Start/End: Original strand, 7433454 - 7433609
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||| |||||||  ||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  7433454 gggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctaaaaa 7433553  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcat 522  Q
    || |||||| ||||||||||| | ||||||||||||||||||||||||| ||||||    
T  7433554 ttgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 358 - 514
Target Start/End: Complemental strand, 32982223 - 32982067
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||| ||||| |||| |||||||||||| |||||  ||||||  ||||||| ||||||| |||||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgac 32982067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 26144264 - 26144411
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  26144264 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 26144363  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  26144364 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 26144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 335 - 484
Target Start/End: Complemental strand, 41972464 - 41972314
Alignment:
Q  335 acccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacat 434  Q
    |||||||||||||| ||||  || ||||| | ||||||||||| || |||||| |||||||||||| |||||   |||||  ||||||| |||||||||     
T  41972464 acccaggggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacac 41972366  T
Q  435 ttacaaaaagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 484  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  41972365 ttacaaaaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 33489666 - 33489815
Alignment:
Q  337 ccaggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattt 436  Q
    ||||||||||||||||||||||||||| | || ||||||  |||| | | | |||||||||||  |||||  | |||   ||||||| ||||||||| ||    
T  33489666 ccaggggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacactt 33489765  T
Q  437 acaaaaagaaaaatttgggcaa--tctgaaaattctcacacgcaaatagg 484  Q
    || |||||||||||||| ||||  ||||||||||||||||||||||||||    
T  33489766 actaaaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 464
Target Start/End: Original strand, 23313247 - 23313345
Alignment:
Q  367 gggcggtcgcccgggctcgattgataattt-ttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaa 464  Q
    ||||||| ||||||||||||||||| |||| |||| |||||  | ||||  |||||   ||||||||||||||||||||||||||||||||||||||||    
T  23313247 gggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 44352670 - 44352614
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataat 394  Q
    ||||||||||||||||| |||||||| | ||| ||||||||||||||||| ||||||    
T  44352670 caggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 31866958 - 31867014
Alignment:
Q  339 aggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatt 395  Q
    ||||||||||||||| ||||||||| | ||||||||||||||| ||||  |||||||    
T  31866958 aggggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  491 aattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||| |||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 423
Target Start/End: Complemental strand, 48901291 - 48901207
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagcc 423  Q
    ||||||||||| |||| |||||| |||| ||||||| | ||||| ||||| |||||||| ||| |||||  |||||| ||||||||    
T  48901291 caggggcggttccaccgcccggcaactccgggcggt-ggccggggtcgatcgataatttatgcacattaggcccaacccaaaagcc 48901207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 358 - 525
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  358 ggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggca 457  Q
    |||||| | |||||||||||||||||||||  ||||||||||| |||||  |||||   ||||||||||||||||| |||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  458 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 377 - 525
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  377 ccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 476  Q
    ||||||||||| |||||||||||| |||||     ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  477 caaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 338 - 525
Target Start/End: Original strand, 31460 - 31647
Alignment:
Q  338 caggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacattta 437  Q
    |||||||||||||| | ||||||||| |  | |||||||||||||||||| |||||||||||| || ||  |||||| |||||||| ||||||||| |||    
T  31460 caggggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacactta 31559  T
Q  438 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 525  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||||||||||||  |||||||||    
T  31560 caaaaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 377 - 514
Target Start/End: Original strand, 17861 - 17998
Alignment:
Q  377 ccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 476  Q
    ||||||||||| |||||||||||| |||||  | |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  17861 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacatg 17960  T
Q  477 caaataggtctcggaattttatttagcacactattgac 514  Q
     |||||||||| | ||||||||||||||||||||||||    
T  17961 taaataggtcttgaaattttatttagcacactattgac 17998  T

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Target: scaffold2142 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Original strand, 531 - 678
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  531 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 630  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  631 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 678  T

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Target: scaffold0002 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 367 - 514
Target Start/End: Complemental strand, 480615 - 480468
Alignment:
Q  367 gggcggtcgcccgggctcgattgataatttttgcgcattattcccaactcaaaagccaattaacacatttacaaaaagaaaaatttgggcaatctgaaaa 466  Q
    ||||||||||||||||||||| |||||||||||| |||||  | ||||  ||||||  ||||||||||||| ||||||||||||||||||||| ||||||    
T  480615 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaagaaaaatttgggcaatttgaaaa 480516  T
Q  467 ttctcacacgcaaataggtctcggaattttatttagcacactattgac 514  Q
    || ||||||| |||||||||| |||||||||||| |||||||||||||    
T  480515 ttgtcacacgtaaataggtcttggaattttatttggcacactattgac 480468  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 70852 - 70921
Alignment:
Q  200 gcaagaaaagaggcactaaaaatagtcccatttcgatggaaagaaatgctatgatagtggttatatagtt 269  Q
    ||||||||||| |||||||||||||| |||  ||||  |||| |||||||||||||||| ||||||||||    
T  70852 gcaagaaaagatgcactaaaaatagttccacctcgaccgaaaaaaatgctatgatagtgcttatatagtt 70921  T

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Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 95
Target Start/End: Original strand, 70725 - 70753
Alignment:
Q  67 ttataatgtaaagtgaattactcacttta 95  Q
    |||||||||||||||||||||||||||||    
T  70725 ttataatgtaaagtgaattactcacttta 70753  T

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Target: scaffold0272 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 279
Target Start/End: Original strand, 8769 - 8836
Alignment:
Q  212 gcactaaaaatagtcccatttcgatggaaagaaatgctatgatagtggttatatagttcaaaatatct 279  Q
    ||||||||||||||||||  ||||  ||||||||||||||||||||| ||||||| || ||| |||||    
T  8769 gcactaaaaatagtcccacctcgaccgaaagaaatgctatgatagtgcttatatacttaaaagtatct 8836  T

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Target: scaffold0769 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 1259 - 1306
Alignment:
Q  340 ggggcggtttcaccacccggcgactctgggcggtcgcccgggctcgat 387  Q
    |||||||||| ||| ||||||||| | |||||||||||||||||||||    
T  1259 ggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 1306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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