View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15361_low_10 (Length: 355)
Name: NF15361_low_10
Description: NF15361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15361_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 318
Target Start/End: Original strand, 37508712 - 37509012
Alignment:
| Q |
18 |
acccttgcttcaaagagagcatgagtggacctttgtaattcccatcattttcactcataagaatacgcccaaaagccattgtagattctgagagaagaag |
117 |
Q |
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| T |
37508712 |
acccttgcttcaaagagagcatgagtggacctttgtaattcccatcattttcactcataagaatacgcccaaaagccattgtagattctgagagaagaag |
37508811 |
T |
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| Q |
118 |
ggtagatagaggatgatccacatgtggtggtttgaagaatggctgagaaaactccccctgcaaattacaaaattgtataggcattactagacaattactt |
217 |
Q |
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| T |
37508812 |
ggtagatagaggttgatccacatgtggtggtttgaagaatggctgagaaaactccccctgcaaattacaaaattgtataggcattactagacaattactt |
37508911 |
T |
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| Q |
218 |
cattgcacaaaacagttatcacaacaactttctgggttttgactaatcaagaagcgtaaacaatttacctcatcaaagaagttgatgatgcaaccatttg |
317 |
Q |
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| T |
37508912 |
cattgcacaaaacagttatcacaacaactttctgggttttgactaatcaagaagcgtgaacaatttacctcatcaaagaagttgatgatgcaaccatttg |
37509011 |
T |
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| Q |
318 |
g |
318 |
Q |
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| T |
37509012 |
g |
37509012 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 40221958 - 40222109
Alignment:
| Q |
25 |
cttcaaagagagcatgagtggacctttgtaattcccatcattttcactcataagaatacgcccaaaagccattgtagattctgagagaagaagggtagat |
124 |
Q |
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| T |
40221958 |
cttcaatgacagcataagtggtcccttgtagttcccatcgttttcactcataagaatacgcccaaatgccatggttgattcagatagaagaagagtggtc |
40222057 |
T |
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| Q |
125 |
agaggatgatccacatgtggtggtttgaagaatggctgagaaaactccccct |
176 |
Q |
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| T |
40222058 |
acaggttgatccagatgcggtggtttcaggaatggctgagaaaactccccct |
40222109 |
T |
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